| Clone Name | rbags14j12 |
|---|---|
| Clone Library Name | barley_pub |
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 54.7 bits (130), Expect = 3e-07 Identities = 24/80 (30%), Positives = 35/80 (43%) Frame = -3 Query: 615 MADLAASLPGMRYSVGSAYKLVEYYTAHPGAAGLKVVNSACCGGGRLNGREFCGTPNTTL 436 + L+ +LP + Y ++ P A G + CC G L+ C + + Sbjct: 438 LGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTGLLSAGALCKKSTSKI 497 Query: 435 CVNRDEYLFWDGVHGTQATW 376 C N YLFWDGVH TQ + Sbjct: 498 CPNTSSYLFWDGVHPTQRAY 517
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 45.1 bits (105), Expect = 2e-04 Identities = 22/80 (27%), Positives = 31/80 (38%) Frame = -3 Query: 615 MADLAASLPGMRYSVGSAYKLVEYYTAHPGAAGLKVVNSACCGGGRLNGREFCGTPNTTL 436 + L+ +LP G Y + P G + + CC G G FC Sbjct: 355 LGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLTKGGVFCKERTLKN 414 Query: 435 CVNRDEYLFWDGVHGTQATW 376 N YLFWDG+H +Q + Sbjct: 415 MSNASSYLFWDGLHPSQRAY 434
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 35.0 bits (79), Expect = 0.21 Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 16/95 (16%) Frame = -3 Query: 618 AMADLAASLPGMRYSVGSAYKLVEYYTAHPGAAGLKVVNSACCG-GGRLN---------- 472 A+ +L +SL + Y L H G K +CCG GG+ N Sbjct: 262 AVIELRSSLSEAAITYVDVYSLKHELFVHAQGHGFKGSLVSCCGHGGKYNYNKGIGCGMK 321 Query: 471 ----GRE-FCGTPNTTLCVNRDEYLFWDGVHGTQA 382 G+E + G P C D+ + WDGVH TQA Sbjct: 322 KIVKGKEVYIGKP----CDEPDKAVVWDGVHFTQA 352
>SDC3_MOUSE (Q64519) Syndecan-3 precursor (SYND3)| Length = 442 Score = 33.1 bits (74), Expect = 0.79 Identities = 31/112 (27%), Positives = 50/112 (44%) Frame = +2 Query: 251 TLTSKLAADTARSSSRISCLKLTGAANPSSTGAP*ISSAPLFQVACVPCTPSQNRYSSRL 430 T ++ ++++ ++ IS T AA ++TGAP +++AP P TP ++ + Sbjct: 144 TEVKEVVEESSQKATTISTTTSTTAA--TTTGAPTMATAPATAATTAPSTPEAPPATATV 201 Query: 431 THKVVLGVPQNSRPLSLPPPQHALFTTLSPAAPGCAV*YSTSL*ALPTEYLI 586 G+ Q PL L A TT PAAP +T PT L+ Sbjct: 202 ADVRTTGI-QGMLPLPLTTAATAKITT--PAAPSPPTTVATLDTEAPTPRLV 250
>WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein| kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1243 Score = 31.6 bits (70), Expect = 2.3 Identities = 25/84 (29%), Positives = 35/84 (41%) Frame = +2 Query: 278 TARSSSRISCLKLTGAANPSSTGAP*ISSAPLFQVACVPCTPSQNRYSSRLTHKVVLGVP 457 TA S+S S NP S G P IS P+F + PC PS + +S + Sbjct: 798 TAFSTSSSSPGTPLSPGNPFSPGTP-ISPGPIFPITSPPCHPSPSPFSP-------ISSQ 849 Query: 458 QNSRPLSLPPPQHALFTTLSPAAP 529 +S P P F++ +P P Sbjct: 850 VSSNPSPHPTSSPLPFSSSTPEFP 873
>TULP4_HUMAN (Q9NRJ4) Tubby-like protein 4 (Tubby superfamily protein)| Length = 1544 Score = 30.0 bits (66), Expect = 6.7 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 6/41 (14%) Frame = +2 Query: 386 CVPCTPSQNRYSSRLTHKVVLG------VPQNSRPLSLPPP 490 C P T NRYS+ +V+ G + QN PLSLPPP Sbjct: 741 CHPVTQVSNRYSN--PGQVIFGSVEMGRIIQNPPPLSLPPP 779 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,782,993 Number of Sequences: 219361 Number of extensions: 1769839 Number of successful extensions: 5586 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5306 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5582 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)