ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14j12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506961.1| PREDICTED Oryza sativa (japonica cultivar-group... 109 1e-20
2ref|XM_467707.1| Oryza sativa (japonica cultivar-group), mRNA 109 1e-20
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
4dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
5dbj|AK099325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
6dbj|AK070261.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
8dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
9dbj|AK110292.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.038
10dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 44 0.59
11ref|XM_480319.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.3
12gb|CP000249.1| Frankia sp. CcI3, complete genome 42 2.3
13dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
14gb|AC073479.7| Homo sapiens BAC clone RP11-749J12 from 2, comple... 42 2.3
15dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
16gb|AY845638.1| Homo sapiens DRIL3 mRNA, complete cds 40 9.2
17ref|XM_523853.1| PREDICTED: Pan troglodytes similar to sidekick ... 40 9.2
18gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 9.2
19gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 9.2
20ref|NM_005224.1| Homo sapiens AT rich interactive domain 3A (BRI... 40 9.2
21gb|AY247647.1| Tepidomonas sp. HM1 DNA polymerase I (polA) gene,... 40 9.2
22gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 9.2
23gb|BC034781.1| Homo sapiens neuronal pentraxin II, mRNA (cDNA cl... 40 9.2
24gb|DQ123899.1| Zea mays RFLP probe umc52 (CBM 4.09) genomic sequ... 40 9.2
25ref|NM_002523.1| Homo sapiens neuronal pentraxin II (NPTX2), mRNA 40 9.2
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.2
27ref|XM_774370.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 9.2
28gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
29gb|BC060828.1| Homo sapiens AT rich interactive domain 3A (BRIGH... 40 9.2
30emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluste... 40 9.2
31gb|BC035339.1| Homo sapiens neuronal pentraxin II, mRNA (cDNA cl... 40 9.2
32gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare sta... 40 9.2
33ref|NM_142053.1| Drosophila melanogaster CG14366-RA (CG14366), mRNA 40 9.2
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
35gb|AC007646.8|AC007646 Drosophila melanogaster, chromosome 3R, r... 40 9.2
36gb|AC007650.7|AC007650 Drosophila melanogaster, chromosome 3R, r... 40 9.2
37gb|AY152547.1| Homo sapiens E2F binding protein (E2FBP1) mRNA, c... 40 9.2
38dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 9.2
39gb|BC048275.1| Homo sapiens neuronal pentraxin II, mRNA (cDNA cl... 40 9.2
40gb|AE003701.2| Drosophila melanogaster chromosome 3R, section 39... 40 9.2
41gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 9.2
42gb|AF039844.1|HSDRIL1S1 Homo sapiens dead ringer like 1 protein ... 40 9.2
43gb|U88047.1|HSU88047 Homo sapiens DNA binding protein homolog (D... 40 9.2
44gb|AC005379.1|AC005379 Homo sapiens chromosome 19, cosmid R32603... 40 9.2
45emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chro... 40 9.2 
>ref|XM_506961.1| PREDICTED Oryza sativa (japonica cultivar-group), P0516G10.12-1 mRNA
          Length = 1637

 Score =  109 bits (55), Expect = 1e-20
 Identities = 172/211 (81%)
 Strand = Plus / Minus

                                                                        
Query: 378  aggtggcctgtgtgccgtgcaccccgtcccaaaacaggtactcgtcgcggttgacgcaca 437
            |||||||||| || ||||||||||||||||| ||||||||| ||| ||||||| ||||  
Sbjct: 1299 aggtggcctgcgtcccgtgcaccccgtcccagaacaggtacccgttgcggttgccgcagt 1240

                                                                        
Query: 438  aggtggtgttgggggtgccgcagaactcccgcccgttgagcctcccgccgccgcagcacg 497
            |||||| |||||| |  |||||     || || |||||||||  ||||||||||||||||
Sbjct: 1239 aggtggagttgggcgccccgcacccgacctgcgcgttgagccggccgccgccgcagcacg 1180

                                                                        
Query: 498  cgctgttcacaaccttgagcccggcggcccccgggtgcgcggtgtagtattccaccagct 557
            |||||||||| ||||||| ||| |||||  |||||| ||| |||  |||   |||||  |
Sbjct: 1179 cgctgttcaccaccttgaaccccgcggcggccgggttcgccgtgaggtaggacaccacgt 1120

                                           
Query: 558  tgtaggcgctccccacggagtacctcatccc 588
            |||| | ||| || |||||||||||||||||
Sbjct: 1119 tgtacgagctgccgacggagtacctcatccc 1089
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>ref|XM_467707.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1637

 Score =  109 bits (55), Expect = 1e-20
 Identities = 172/211 (81%)
 Strand = Plus / Minus

                                                                        
Query: 378  aggtggcctgtgtgccgtgcaccccgtcccaaaacaggtactcgtcgcggttgacgcaca 437
            |||||||||| || ||||||||||||||||| ||||||||| ||| ||||||| ||||  
Sbjct: 1298 aggtggcctgcgtcccgtgcaccccgtcccagaacaggtacccgttgcggttgccgcagt 1239

                                                                        
Query: 438  aggtggtgttgggggtgccgcagaactcccgcccgttgagcctcccgccgccgcagcacg 497
            |||||| |||||| |  |||||     || || |||||||||  ||||||||||||||||
Sbjct: 1238 aggtggagttgggcgccccgcacccgacctgcgcgttgagccggccgccgccgcagcacg 1179

                                                                        
Query: 498  cgctgttcacaaccttgagcccggcggcccccgggtgcgcggtgtagtattccaccagct 557
            |||||||||| ||||||| ||| |||||  |||||| ||| |||  |||   |||||  |
Sbjct: 1178 cgctgttcaccaccttgaaccccgcggcggccgggttcgccgtgaggtaggacaccacgt 1119

                                           
Query: 558  tgtaggcgctccccacggagtacctcatccc 588
            |||| | ||| || |||||||||||||||||
Sbjct: 1118 tgtacgagctgccgacggagtacctcatccc 1088
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  109 bits (55), Expect = 1e-20
 Identities = 172/211 (81%)
 Strand = Plus / Plus

                                                                            
Query: 378      aggtggcctgtgtgccgtgcaccccgtcccaaaacaggtactcgtcgcggttgacgcaca 437
                |||||||||| || ||||||||||||||||| ||||||||| ||| ||||||| ||||  
Sbjct: 30984497 aggtggcctgcgtcccgtgcaccccgtcccagaacaggtacccgttgcggttgccgcagt 30984556

                                                                            
Query: 438      aggtggtgttgggggtgccgcagaactcccgcccgttgagcctcccgccgccgcagcacg 497
                |||||| |||||| |  |||||     || || |||||||||  ||||||||||||||||
Sbjct: 30984557 aggtggagttgggcgccccgcacccgacctgcgcgttgagccggccgccgccgcagcacg 30984616

                                                                            
Query: 498      cgctgttcacaaccttgagcccggcggcccccgggtgcgcggtgtagtattccaccagct 557
                |||||||||| ||||||| ||| |||||  |||||| ||| |||  |||   |||||  |
Sbjct: 30984617 cgctgttcaccaccttgaaccccgcggcggccgggttcgccgtgaggtaggacaccacgt 30984676

                                               
Query: 558      tgtaggcgctccccacggagtacctcatccc 588
                |||| | ||| || |||||||||||||||||
Sbjct: 30984677 tgtacgagctgccgacggagtacctcatccc 30984707
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>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0516G10
          Length = 148937

 Score =  109 bits (55), Expect = 1e-20
 Identities = 172/211 (81%)
 Strand = Plus / Plus

                                                                         
Query: 378   aggtggcctgtgtgccgtgcaccccgtcccaaaacaggtactcgtcgcggttgacgcaca 437
             |||||||||| || ||||||||||||||||| ||||||||| ||| ||||||| ||||  
Sbjct: 39453 aggtggcctgcgtcccgtgcaccccgtcccagaacaggtacccgttgcggttgccgcagt 39512

                                                                         
Query: 438   aggtggtgttgggggtgccgcagaactcccgcccgttgagcctcccgccgccgcagcacg 497
             |||||| |||||| |  |||||     || || |||||||||  ||||||||||||||||
Sbjct: 39513 aggtggagttgggcgccccgcacccgacctgcgcgttgagccggccgccgccgcagcacg 39572

                                                                         
Query: 498   cgctgttcacaaccttgagcccggcggcccccgggtgcgcggtgtagtattccaccagct 557
             |||||||||| ||||||| ||| |||||  |||||| ||| |||  |||   |||||  |
Sbjct: 39573 cgctgttcaccaccttgaaccccgcggcggccgggttcgccgtgaggtaggacaccacgt 39632

                                            
Query: 558   tgtaggcgctccccacggagtacctcatccc 588
             |||| | ||| || |||||||||||||||||
Sbjct: 39633 tgtacgagctgccgacggagtacctcatccc 39663
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>dbj|AK099325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033016K19, full
            insert sequence
          Length = 1637

 Score =  109 bits (55), Expect = 1e-20
 Identities = 172/211 (81%)
 Strand = Plus / Minus

                                                                        
Query: 378  aggtggcctgtgtgccgtgcaccccgtcccaaaacaggtactcgtcgcggttgacgcaca 437
            |||||||||| || ||||||||||||||||| ||||||||| ||| ||||||| ||||  
Sbjct: 1298 aggtggcctgcgtcccgtgcaccccgtcccagaacaggtacccgttgcggttgccgcagt 1239

                                                                        
Query: 438  aggtggtgttgggggtgccgcagaactcccgcccgttgagcctcccgccgccgcagcacg 497
            |||||| |||||| |  |||||     || || |||||||||  ||||||||||||||||
Sbjct: 1238 aggtggagttgggcgccccgcacccgacctgcgcgttgagccggccgccgccgcagcacg 1179

                                                                        
Query: 498  cgctgttcacaaccttgagcccggcggcccccgggtgcgcggtgtagtattccaccagct 557
            |||||||||| ||||||| ||| |||||  |||||| ||| |||  |||   |||||  |
Sbjct: 1178 cgctgttcaccaccttgaaccccgcggcggccgggttcgccgtgaggtaggacaccacgt 1119

                                           
Query: 558  tgtaggcgctccccacggagtacctcatccc 588
            |||| | ||| || |||||||||||||||||
Sbjct: 1118 tgtacgagctgccgacggagtacctcatccc 1088
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>dbj|AK070261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042P13, full
            insert sequence
          Length = 1637

 Score =  109 bits (55), Expect = 1e-20
 Identities = 172/211 (81%)
 Strand = Plus / Minus

                                                                        
Query: 378  aggtggcctgtgtgccgtgcaccccgtcccaaaacaggtactcgtcgcggttgacgcaca 437
            |||||||||| || ||||||||||||||||| ||||||||| ||| ||||||| ||||  
Sbjct: 1299 aggtggcctgcgtcccgtgcaccccgtcccagaacaggtacccgttgcggttgccgcagt 1240

                                                                        
Query: 438  aggtggtgttgggggtgccgcagaactcccgcccgttgagcctcccgccgccgcagcacg 497
            |||||| |||||| |  |||||     || || |||||||||  ||||||||||||||||
Sbjct: 1239 aggtggagttgggcgccccgcacccgacctgcgcgttgagccggccgccgccgcagcacg 1180

                                                                        
Query: 498  cgctgttcacaaccttgagcccggcggcccccgggtgcgcggtgtagtattccaccagct 557
            |||||||||| ||||||| ||| |||||  |||||| ||| |||  |||   |||||  |
Sbjct: 1179 cgctgttcaccaccttgaaccccgcggcggccgggttcgccgtgaggtaggacaccacgt 1120

                                           
Query: 558  tgtaggcgctccccacggagtacctcatccc 588
            |||| | ||| || |||||||||||||||||
Sbjct: 1119 tgtacgagctgccgacggagtacctcatccc 1089
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                            
Query: 476      agcctcccgccgccgcagcacgcgctgt 503
                ||||||||||||||||||||||||||||
Sbjct: 30312824 agcctcccgccgccgcagcacgcgctgt 30312851
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>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0548E04
          Length = 138037

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                         
Query: 476   agcctcccgccgccgcagcacgcgctgt 503
             ||||||||||||||||||||||||||||
Sbjct: 59419 agcctcccgccgccgcagcacgcgctgt 59446
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>dbj|AK110292.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-G01, full
            insert sequence
          Length = 1588

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 476  agcctcccgccgccgcagcacgcgctgt 503
            ||||||||||||||| ||||||||||||
Sbjct: 1136 agcctcccgccgccgtagcacgcgctgt 1109
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 410     aacaggtactcgtcgcggttga 431
               ||||||||||||||||||||||
Sbjct: 1070515 aacaggtactcgtcgcggttga 1070494
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>ref|XM_480319.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 528

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 483 cgccgccgcagcacgcgctgt 503
           |||||||||||||||||||||
Sbjct: 311 cgccgccgcagcacgcgctgt 331
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 341    accggcgcgccgtagatctcc 361
              |||||||||||||||||||||
Sbjct: 962965 accggcgcgccgtagatctcc 962945
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 483     cgccgccgcagcacgcgctgt 503
               |||||||||||||||||||||
Sbjct: 4297978 cgccgccgcagcacgcgctgt 4297958
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>gb|AC073479.7| Homo sapiens BAC clone RP11-749J12 from 2, complete sequence
          Length = 196671

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    tccttattttgctagaaacaa 113
             |||||||||||||||||||||
Sbjct: 50947 tccttattttgctagaaacaa 50927
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>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0054L03
          Length = 183623

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 483   cgccgccgcagcacgcgctgt 503
             |||||||||||||||||||||
Sbjct: 60772 cgccgccgcagcacgcgctgt 60752
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>gb|AY845638.1| Homo sapiens DRIL3 mRNA, complete cds
          Length = 2825

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 cttgagcccggcggcccccg 530
           ||||||||||||||||||||
Sbjct: 113 cttgagcccggcggcccccg 132
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>ref|XM_523853.1| PREDICTED: Pan troglodytes similar to sidekick 2; Drosophila
           sidekick-like; chicken sidekick 2-like (LOC468464), mRNA
          Length = 1971

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 375 tccaggtggcctgtgtgccg 394
           ||||||||||||||||||||
Sbjct: 224 tccaggtggcctgtgtgccg 243
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 585    tcccgggcagcgacgcggcg 604
              ||||||||||||||||||||
Sbjct: 477818 tcccgggcagcgacgcggcg 477799
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 600     cggcgaggtccgccatcgcg 619
               ||||||||||||||||||||
Sbjct: 1763780 cggcgaggtccgccatcgcg 1763799
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>ref|NM_005224.1| Homo sapiens AT rich interactive domain 3A (BRIGHT- like) (ARID3A),
           mRNA
          Length = 2725

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 cttgagcccggcggcccccg 530
           ||||||||||||||||||||
Sbjct: 22  cttgagcccggcggcccccg 41
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>gb|AY247647.1| Tepidomonas sp. HM1 DNA polymerase I (polA) gene, complete cds
          Length = 2791

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 150 ctgctgcgcgcgctcgacga 169
           ||||||||||||||||||||
Sbjct: 889 ctgctgcgcgcgctcgacga 908
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    ctgcgcgcgctcgacgatgc 172
              ||||||||||||||||||||
Sbjct: 401090 ctgcgcgcgctcgacgatgc 401109
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>gb|BC034781.1| Homo sapiens neuronal pentraxin II, mRNA (cDNA clone MGC:35142
            IMAGE:5169124), complete cds
          Length = 2746

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  aaacaaaacctccaaaccac 127
            ||||||||||||||||||||
Sbjct: 2275 aaacaaaacctccaaaccac 2256
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>gb|DQ123899.1| Zea mays RFLP probe umc52 (CBM 4.09) genomic sequence
          Length = 824

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 478 cctcccgccgccgcagcacg 497
           ||||||||||||||||||||
Sbjct: 144 cctcccgccgccgcagcacg 163
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>ref|NM_002523.1| Homo sapiens neuronal pentraxin II (NPTX2), mRNA
          Length = 2746

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  aaacaaaacctccaaaccac 127
            ||||||||||||||||||||
Sbjct: 2275 aaacaaaacctccaaaccac 2256
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 96       ttattttgctagaaacaaaa 115
                ||||||||||||||||||||
Sbjct: 10397402 ttattttgctagaaacaaaa 10397421
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>ref|XM_774370.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_487_46425_40744)
            partial mRNA
          Length = 5682

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  gtggcctgtgtgccgtgcac 399
            ||||||||||||||||||||
Sbjct: 2843 gtggcctgtgtgccgtgcac 2824
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>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039F10, complete sequence
          Length = 139714

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    ttattttgctagaaacaaaa 115
             ||||||||||||||||||||
Sbjct: 53955 ttattttgctagaaacaaaa 53974
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>gb|BC060828.1| Homo sapiens AT rich interactive domain 3A (BRIGHT- like), mRNA
           (cDNA clone MGC:71697 IMAGE:30342057), complete cds
          Length = 2825

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 cttgagcccggcggcccccg 530
           ||||||||||||||||||||
Sbjct: 112 cttgagcccggcggcccccg 131
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>emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluster for biosynthesis of
             glycopeptide antibiotic A40926, strain ATCC 39727
          Length = 89153

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   cgccgtagatctcctcggcg 367
             ||||||||||||||||||||
Sbjct: 71652 cgccgtagatctcctcggcg 71633
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>gb|BC035339.1| Homo sapiens neuronal pentraxin II, mRNA (cDNA clone MGC:35520
            IMAGE:5198692), complete cds
          Length = 2746

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  aaacaaaacctccaaaccac 127
            ||||||||||||||||||||
Sbjct: 2280 aaacaaaacctccaaaccac 2261
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>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03,
              from chromosome 3, complete sequence
          Length = 125800

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     ttattttgctagaaacaaaa 115
              ||||||||||||||||||||
Sbjct: 110868 ttattttgctagaaacaaaa 110887
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>ref|NM_142053.1| Drosophila melanogaster CG14366-RA (CG14366), mRNA
          Length = 2331

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 348  cgccgtagatctcctcggcg 367
            ||||||||||||||||||||
Sbjct: 1951 cgccgtagatctcctcggcg 1932
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 96       ttattttgctagaaacaaaa 115
                ||||||||||||||||||||
Sbjct: 10395503 ttattttgctagaaacaaaa 10395522
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>gb|AC007646.8|AC007646 Drosophila melanogaster, chromosome 3R, region 87F-87F, BAC clone
              BACR03J04, complete sequence
          Length = 179454

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    cgccgtagatctcctcggcg 367
              ||||||||||||||||||||
Sbjct: 166007 cgccgtagatctcctcggcg 165988
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>gb|AC007650.7|AC007650 Drosophila melanogaster, chromosome 3R, region 87F-87F, BAC clone
             BACR30G22, complete sequence
          Length = 167912

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   cgccgtagatctcctcggcg 367
             ||||||||||||||||||||
Sbjct: 72938 cgccgtagatctcctcggcg 72919
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>gb|AY152547.1| Homo sapiens E2F binding protein (E2FBP1) mRNA, complete cds
          Length = 2123

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 cttgagcccggcggcccccg 530
           ||||||||||||||||||||
Sbjct: 22  cttgagcccggcggcccccg 41
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 362     tcggcgcccttgttccaggt 381
               ||||||||||||||||||||
Sbjct: 2855933 tcggcgcccttgttccaggt 2855914
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>gb|BC048275.1| Homo sapiens neuronal pentraxin II, mRNA (cDNA clone MGC:54313
            IMAGE:5165672), complete cds
          Length = 2780

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  aaacaaaacctccaaaccac 127
            ||||||||||||||||||||
Sbjct: 2245 aaacaaaacctccaaaccac 2226
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>gb|AE003701.2| Drosophila melanogaster chromosome 3R, section 39 of 118 of the complete
              sequence
          Length = 208368

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    cgccgtagatctcctcggcg 367
              ||||||||||||||||||||
Sbjct: 147081 cgccgtagatctcctcggcg 147062
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 150     ctgctgcgcgcgctcgacga 169
               ||||||||||||||||||||
Sbjct: 2898675 ctgctgcgcgcgctcgacga 2898694
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>gb|AF039844.1|HSDRIL1S1 Homo sapiens dead ringer like 1 protein (DRIL1) gene, exon 1,
           complete sequence
          Length = 1140

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 cttgagcccggcggcccccg 530
           ||||||||||||||||||||
Sbjct: 314 cttgagcccggcggcccccg 333
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>gb|U88047.1|HSU88047 Homo sapiens DNA binding protein homolog (DRIL1) mRNA, complete cds
          Length = 2725

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 cttgagcccggcggcccccg 530
           ||||||||||||||||||||
Sbjct: 22  cttgagcccggcggcccccg 41
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>gb|AC005379.1|AC005379 Homo sapiens chromosome 19, cosmid R32603, complete sequence
          Length = 45617

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 511   cttgagcccggcggcccccg 530
             ||||||||||||||||||||
Sbjct: 23904 cttgagcccggcggcccccg 23923
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>emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chromosome 4, complete
             sequence
          Length = 199565

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   ttccaggtggcctgtgtgcc 393
             ||||||||||||||||||||
Sbjct: 99338 ttccaggtggcctgtgtgcc 99357


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,339,245
Number of Sequences: 3902068
Number of extensions: 4339245
Number of successful extensions: 83458
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82319
Number of HSP's gapped (non-prelim): 1133
length of query: 674
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 651
effective length of database: 17,143,297,704
effective search space: 11160286805304
effective search space used: 11160286805304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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