| Clone Name | rbags14i24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M31545.1|BLYGSA Barley glutamate 1-semialdehyde aminotransferase (GSA) mRNA, complete cds Length = 1620 Score = 1088 bits (549), Expect = 0.0 Identities = 562/565 (99%), Gaps = 1/565 (0%) Strand = Plus / Minus Query: 35 ggaggtcgtagccaa-gttttattgccaagacaaaatcaccccaaatgctaactcagaag 93 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1620 ggaggtcgtagccaaagttttattgccaagacaaaatcaccccaaatgctaactcagaag 1561 Query: 94 aagaaaaatgggctagagacaagatactgctgctgcacaacaaaatacaatacaaaacta 153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1560 aagaaaaatgggctagagacaagatactgctgctgcacaacaaaatacaatacaaaacta 1501 Query: 154 aacttcagccacgtacaaactaacagaatacaacagaaggaaaagcttcaaaaggtttgc 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1500 aacttcagccacgtacaaactaacagaatacaacagaaggaaaagcttcaaaaggtttgc 1441 Query: 214 aatccaaatcatctatatccatcgaagaaccttctcggcagcctccacggttttctcaat 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1440 aatccaaatcatctatatccatcgaagaaccttctcggcagcctccacggttttctcaat 1381 Query: 274 gtcttgggtggtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagata 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1380 gtcttgggtggtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagata 1321 Query: 334 cacgccttcttccagcattccacggtggaacctcccaaacttcgctgtgtcactcttctt 393 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1320 cacgccttcgcccagcattccacggtggaacctcccaaacttcgctgtgtcactcttctt 1261 Query: 394 ggcatcatcaaagttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgat 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 ggcatcatcaaagttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgat 1201 Query: 454 gtgtcctccacacatctcgtgccctgttttagcgcccacatccaatatgccccggacaag 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 gtgtcctccacacatctcgtgccctgttttagcgcccacatccaatatgccccggacaag 1141 Query: 514 ttcaccagtgaccttgtctaagtattcataggtgccaggctccatcagacgcttgagagt 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ttcaccagtgaccttgtctaagtattcataggtgccaggctccatcagacgcttgagagt 1081 Query: 574 gtggattccagcagtcatagctaga 598 ||||||||||||||||||||||||| Sbjct: 1080 gtggattccagcagtcatagctaga 1056
>gb|BT009635.1| Triticum aestivum clone wre1n.pk183.a6:fis, full insert mRNA sequence Length = 1016 Score = 767 bits (387), Expect = 0.0 Identities = 483/515 (93%), Gaps = 10/515 (1%) Strand = Plus / Minus Query: 90 gaagaagaaaaatgggctagagacaagatactgctgctgc------acaacaaaatacaa 143 |||||||| ||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 989 gaagaagagaaatgggctagagacaatatactgctgctgctgctgcacaacaaaatacaa 930 Query: 144 tacaaaactaaacttcagccacgtacaaactaacagaatacaacagaaggaaaagcttca 203 ||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||| || Sbjct: 929 tacgaaactaaacttcagccacgtacaaac----agagtacaacagaaggaaaggctcca 874 Query: 204 aaaggtttgcaatccaaatcatctatatccatcgaagaaccttctcggcagcctccacgg 263 ||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 873 aaaggtttgcaatccgaatcatctatatccgacgaagaaccttctcagcagcctccacgg 814 Query: 264 ttttctcaatgtcttgggtggtgtgtgccaagcttgtaaaacctgcctcgaactgggatg 323 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 813 ttttctcaatgtctagggttgtgtgtgccaagcttgtaaaacctgcctcgaactgggatg 754 Query: 324 gtgccagatacacgccttcttccagcattccacggtggaacctcccaaacttcgctgtgt 383 |||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 753 gtgctaaatacacgccttcttccagcattccacggtggaacctcccaaacttcgcggtgt 694 Query: 384 cactcttcttggcatcatcaaagttgtgcactgggccacctgcgaagaagaatccgaaca 443 | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 cgctcttcttggcgtcatcaaagttgtgcactgggccacctgcgaagaagaatccgaaca 634 Query: 444 tgcctctgatgtgtcctccacacatctcgtgccctgttttagcgcccacatccaatatgc 503 |||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||| | Sbjct: 633 tgcccctgatgtgtcctccacacatctcgtgccctgttttagcacccgcatccaatatac 574 Query: 504 cccggacaagttcaccagtgaccttgtctaagtattcataggtgccaggctccatcagac 563 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 cctggacaagttcaccagtgaccttgtctaagtattcataggtgccaggctccatcagac 514 Query: 564 gcttgagagtgtggattccagcagtcatagctaga 598 ||||||||||||||||||||||||||||||||||| Sbjct: 513 gcttgagagtgtggattccagcagtcatagctaga 479
>gb|BT008916.1| Triticum aestivum clone wpa1c.pk004.m14:fis, full insert mRNA sequence Length = 1487 Score = 765 bits (386), Expect = 0.0 Identities = 456/479 (95%), Gaps = 4/479 (0%) Strand = Plus / Minus Query: 120 ctgctgctgcacaacaaaatacaatacaaaactaaacttcagccacgtacaaactaacag 179 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1382 ctgctgctgcacaacaaaatacaatacgaaactaaacttcagccacgtacaaac----ag 1327 Query: 180 aatacaacagaaggaaaagcttcaaaaggtttgcaatccaaatcatctatatccatcgaa 239 | ||||||||||||||| ||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 1326 agtacaacagaaggaaaggctccaaaaggtttgcaatccgaatcatctatatccgacgaa 1267 Query: 240 gaaccttctcggcagcctccacggttttctcaatgtcttgggtggtgtgtgccaagcttg 299 |||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 1266 gaaccttctcagcagcctccacggttttctcaatgtctagggttgtgtgtgccaagcttg 1207 Query: 300 taaaacctgcctcgaactgggatggtgccagatacacgccttcttccagcattccacggt 359 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1206 taaaacctgcctcgaactgggatggtgccaaatacacgccttcttccagcattccacggt 1147 Query: 360 ggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaaagttgtgcactgggc 419 ||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| Sbjct: 1146 ggaacctcccaaacttcgcggtgtcgctcttcttggcgtcatcaaagttgtgcactgggc 1087 Query: 420 cacctgcgaagaagaatccgaacatgcctctgatgtgtcctccacacatctcgtgccctg 479 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1086 cacctgcgaagaagaatccgaacatgcccctgatgtgtcctccacacatctcgtgccctg 1027 Query: 480 ttttagcgcccacatccaatatgccccggacaagttcaccagtgaccttgtctaagtatt 539 ||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 1026 ttttagcacccgcatccaatataccctggacaagttcaccagtgaccttgtctaagtatt 967 Query: 540 cataggtgccaggctccatcagacgcttgagagtgtggattccagcagtcatagctaga 598 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 cataggtgccaggctccatcagacgcttgagagtgtggattccagcagtcatagctaga 908
>ref|XM_483492.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 337 bits (170), Expect = 3e-89 Identities = 323/374 (86%) Strand = Plus / Minus Query: 225 tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 284 ||||||||| |||||||| ||| | || |||||||||||||| || ||||| |||| || Sbjct: 1463 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 1404 Query: 285 tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 344 ||||||||||||| || ||||||||||| ||||||||||| || || ||||| ||||||| Sbjct: 1403 tgtgtgccaagctggtgaaacctgcctcaaactgggatggagctaggtacacaccttctt 1344 Query: 345 ccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaa 404 | ||||| || |||| ||||||||||||||| || |||||||||||||| || ||| ||| Sbjct: 1343 caagcatgccccggtagaacctcccaaacttggcggtgtcactcttcttcgcgtcaccaa 1284 Query: 405 agttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccac 464 ||||||| ||||||||| | | ||||||||| |||||||| || |||||||||||||||| Sbjct: 1283 agttgtgaactgggccagcggtgaagaagaacccgaacatccccctgatgtgtcctccac 1224 Query: 465 acatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtga 524 ||||||| || || ||||| || ||| | ||||||| || || ||||| |||||||||| Sbjct: 1223 acatctcatgtccagttttcgcacccgcgtccaataccccgcgaacaagatcaccagtga 1164 Query: 525 ccttgtctaagtattcataggtgccaggctccatcagacgcttgagagtgtggattccag 584 |||||| ||||| || ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 1163 tcttgtccaagtaatcgtaggttccaggctccatcagacgcttgagtgtgtggattccag 1104 Query: 585 cagtcatagctaga 598 |||||||||||||| Sbjct: 1103 cagtcatagctaga 1090
>ref|XM_507303.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702E04.16 mRNA Length = 1719 Score = 337 bits (170), Expect = 3e-89 Identities = 323/374 (86%) Strand = Plus / Minus Query: 225 tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 284 ||||||||| |||||||| ||| | || |||||||||||||| || ||||| |||| || Sbjct: 1520 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 1461 Query: 285 tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 344 ||||||||||||| || ||||||||||| ||||||||||| || || ||||| ||||||| Sbjct: 1460 tgtgtgccaagctggtgaaacctgcctcaaactgggatggagctaggtacacaccttctt 1401 Query: 345 ccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaa 404 | ||||| || |||| ||||||||||||||| || |||||||||||||| || ||| ||| Sbjct: 1400 caagcatgccccggtagaacctcccaaacttggcggtgtcactcttcttcgcgtcaccaa 1341 Query: 405 agttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccac 464 ||||||| ||||||||| | | ||||||||| |||||||| || |||||||||||||||| Sbjct: 1340 agttgtgaactgggccagcggtgaagaagaacccgaacatccccctgatgtgtcctccac 1281 Query: 465 acatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtga 524 ||||||| || || ||||| || ||| | ||||||| || || ||||| |||||||||| Sbjct: 1280 acatctcatgtccagttttcgcacccgcgtccaataccccgcgaacaagatcaccagtga 1221 Query: 525 ccttgtctaagtattcataggtgccaggctccatcagacgcttgagagtgtggattccag 584 |||||| ||||| || ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 1220 tcttgtccaagtaatcgtaggttccaggctccatcagacgcttgagtgtgtggattccag 1161 Query: 585 cagtcatagctaga 598 |||||||||||||| Sbjct: 1160 cagtcatagctaga 1147
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 337 bits (170), Expect = 3e-89 Identities = 323/374 (86%) Strand = Plus / Plus Query: 225 tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 284 ||||||||| |||||||| ||| | || |||||||||||||| || ||||| |||| || Sbjct: 26524372 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 26524431 Query: 285 tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 344 ||||||||||||| || ||||||||||| ||||||||||| || || ||||| ||||||| Sbjct: 26524432 tgtgtgccaagctggtgaaacctgcctcaaactgggatggagctaggtacacaccttctt 26524491 Query: 345 ccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaa 404 | ||||| || |||| ||||||||||||||| || |||||||||||||| || ||| ||| Sbjct: 26524492 caagcatgccccggtagaacctcccaaacttggcggtgtcactcttcttcgcgtcaccaa 26524551 Query: 405 agttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccac 464 ||||||| ||||||||| | | ||||||||| |||||||| || |||||||||||||||| Sbjct: 26524552 agttgtgaactgggccagcggtgaagaagaacccgaacatccccctgatgtgtcctccac 26524611 Query: 465 acatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtga 524 ||||||| || || ||||| || ||| | ||||||| || || ||||| |||||||||| Sbjct: 26524612 acatctcatgtccagttttcgcacccgcgtccaataccccgcgaacaagatcaccagtga 26524671 Query: 525 ccttgtctaagtattcataggtgccaggctccatcagacgcttgagagtgtggattccag 584 |||||| ||||| || ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 26524672 tcttgtccaagtaatcgtaggttccaggctccatcagacgcttgagtgtgtggattccag 26524731 Query: 585 cagtcatagctaga 598 |||||||||||||| Sbjct: 26524732 cagtcatagctaga 26524745
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 337 bits (170), Expect = 3e-89 Identities = 323/374 (86%) Strand = Plus / Plus Query: 225 tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 284 ||||||||| |||||||| ||| | || |||||||||||||| || ||||| |||| || Sbjct: 73239 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 73298 Query: 285 tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 344 ||||||||||||| || ||||||||||| ||||||||||| || || ||||| ||||||| Sbjct: 73299 tgtgtgccaagctggtgaaacctgcctcaaactgggatggagctaggtacacaccttctt 73358 Query: 345 ccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaa 404 | ||||| || |||| ||||||||||||||| || |||||||||||||| || ||| ||| Sbjct: 73359 caagcatgccccggtagaacctcccaaacttggcggtgtcactcttcttcgcgtcaccaa 73418 Query: 405 agttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccac 464 ||||||| ||||||||| | | ||||||||| |||||||| || |||||||||||||||| Sbjct: 73419 agttgtgaactgggccagcggtgaagaagaacccgaacatccccctgatgtgtcctccac 73478 Query: 465 acatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtga 524 ||||||| || || ||||| || ||| | ||||||| || || ||||| |||||||||| Sbjct: 73479 acatctcatgtccagttttcgcacccgcgtccaataccccgcgaacaagatcaccagtga 73538 Query: 525 ccttgtctaagtattcataggtgccaggctccatcagacgcttgagagtgtggattccag 584 |||||| ||||| || ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 73539 tcttgtccaagtaatcgtaggttccaggctccatcagacgcttgagtgtgtggattccag 73598 Query: 585 cagtcatagctaga 598 |||||||||||||| Sbjct: 73599 cagtcatagctaga 73612
>dbj|AK104694.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H12, full insert sequence Length = 1575 Score = 337 bits (170), Expect = 3e-89 Identities = 323/374 (86%) Strand = Plus / Minus Query: 225 tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 284 ||||||||| |||||||| ||| | || |||||||||||||| || ||||| |||| || Sbjct: 1463 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 1404 Query: 285 tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 344 ||||||||||||| || ||||||||||| ||||||||||| || || ||||| ||||||| Sbjct: 1403 tgtgtgccaagctggtgaaacctgcctcaaactgggatggagctaggtacacaccttctt 1344 Query: 345 ccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaa 404 | ||||| || |||| ||||||||||||||| || |||||||||||||| || ||| ||| Sbjct: 1343 caagcatgccccggtagaacctcccaaacttggcggtgtcactcttcttcgcgtcaccaa 1284 Query: 405 agttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccac 464 ||||||| ||||||||| | | ||||||||| |||||||| || |||||||||||||||| Sbjct: 1283 agttgtgaactgggccagcggtgaagaagaacccgaacatccccctgatgtgtcctccac 1224 Query: 465 acatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtga 524 ||||||| || || ||||| || ||| | ||||||| || || ||||| |||||||||| Sbjct: 1223 acatctcatgtccagttttcgcacccgcgtccaataccccgcgaacaagatcaccagtga 1164 Query: 525 ccttgtctaagtattcataggtgccaggctccatcagacgcttgagagtgtggattccag 584 |||||| ||||| || ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 1163 tcttgtccaagtaatcgtaggttccaggctccatcagacgcttgagtgtgtggattccag 1104 Query: 585 cagtcatagctaga 598 |||||||||||||| Sbjct: 1103 cagtcatagctaga 1090
>dbj|AK064826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F06, full insert sequence Length = 1719 Score = 337 bits (170), Expect = 3e-89 Identities = 323/374 (86%) Strand = Plus / Minus Query: 225 tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 284 ||||||||| |||||||| ||| | || |||||||||||||| || ||||| |||| || Sbjct: 1520 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 1461 Query: 285 tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 344 ||||||||||||| || ||||||||||| ||||||||||| || || ||||| ||||||| Sbjct: 1460 tgtgtgccaagctggtgaaacctgcctcaaactgggatggagctaggtacacaccttctt 1401 Query: 345 ccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaa 404 | ||||| || |||| ||||||||||||||| || |||||||||||||| || ||| ||| Sbjct: 1400 caagcatgccccggtagaacctcccaaacttggcggtgtcactcttcttcgcgtcaccaa 1341 Query: 405 agttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccac 464 ||||||| ||||||||| | | ||||||||| |||||||| || |||||||||||||||| Sbjct: 1340 agttgtgaactgggccagcggtgaagaagaacccgaacatccccctgatgtgtcctccac 1281 Query: 465 acatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtga 524 ||||||| || || ||||| || ||| | ||||||| || || ||||| |||||||||| Sbjct: 1280 acatctcatgtccagttttcgcacccgcgtccaataccccgcgaacaagatcaccagtga 1221 Query: 525 ccttgtctaagtattcataggtgccaggctccatcagacgcttgagagtgtggattccag 584 |||||| ||||| || ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 1220 tcttgtccaagtaatcgtaggttccaggctccatcagacgcttgagtgtgtggattccag 1161 Query: 585 cagtcatagctaga 598 |||||||||||||| Sbjct: 1160 cagtcatagctaga 1147
>gb|AY112534.1| Zea mays CL13295_1 mRNA sequence Length = 629 Score = 198 bits (100), Expect = 1e-47 Identities = 295/360 (81%) Strand = Plus / Plus Query: 239 agaaccttctcggcagcctccacggttttctcaatgtcttgggtggtgtgtgccaagctt 298 ||||||||||| || ||||| ||||| ||||| ||||| |||| |||||| |||||||| Sbjct: 240 agaaccttctcagcggcctcgacggtcttctcgatgtcctgggaggtgtgcgccaagctg 299 Query: 299 gtaaaacctgcctcgaactgggatggtgccagatacacgccttcttccagcattccacgg 358 || || || ||||||||||| ||||| || | |||||||| || |||||||| |||||| Sbjct: 300 gtgaaccccgcctcgaactgcgatggagcgaagtacacgccctcctccagcatgccacgg 359 Query: 359 tggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaaagttgtgcactggg 418 | ||||||||| |||||| | ||||| ||||||||||| || | || ||||| || || Sbjct: 360 tagaacctcccgaacttctcggtgtcgctcttcttggcgtccccgaaattgtggacgggc 419 Query: 419 ccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccacacatctcgtgccct 478 || || | ||||||||| || ||||| |||||||| |||||||| |||||||| |||||| Sbjct: 420 ccgccggtgaagaagaagccaaacattcctctgatatgtcctccgcacatctcatgccct 479 Query: 479 gttttagcgcccacatccaatatgccccggacaagttcaccagtgaccttgtctaagtat 538 | ||| || || || |||| ||| || ||||| ||||| || |||| |||||| ||||| Sbjct: 480 gctttcgcaccgacgtccagtatcccacggacgagttcgccggtgatcttgtccaagtac 539 Query: 539 tcataggtgccaggctccatcagacgcttgagagtgtggattccagcagtcatagctaga 598 || |||||||| ||||| |||| |||||||| |||||||| ||||| ||||| |||||| Sbjct: 540 tcgtaggtgccgggctctgtcagccgcttgagcgtgtggatcccagcggtcatggctaga 599
>dbj|D29706.2|RICYK18 Oryza sativa mRNA, partial homologous to glutamate 1-semialdehyde-aminotransferase gene Length = 354 Score = 93.7 bits (47), Expect = 6e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 225 tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 284 ||||||||| |||||||| ||| | || |||||||||||||| || ||||| |||| || Sbjct: 173 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 114 Query: 285 tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 344 ||||||||||||| || |||||||||| ||||||||||| || || ||||| ||||||| Sbjct: 113 tgtgtgccaagctggt-gaacctgcctcaaactgggatggagctaggtacacaccttctt 55 Query: 345 ccagcat 351 | ||||| Sbjct: 54 caagcat 48
>ref|NM_114732.3| Arabidopsis thaliana glutamate-1-semialdehyde 2,1-aminomutase/ pyridoxal phosphate binding / transaminase AT3G48730 mRNA, complete cds Length = 1645 Score = 63.9 bits (32), Expect = 6e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 284 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 343 ||||| |||||||| |||||||| |||||||| || || ||||||| || || |||||| Sbjct: 1435 gtgtgagccaagctagtaaaaccggcctcgaattgagaaggtgccaagtagacaccttct 1376 Query: 344 tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 |||| |||||| | | ||| | ||||||||| |||| ||||||||||| ||||| Sbjct: 1375 tccaacattcctctgaaaaactttccaaacttctctgtatcactcttctttgcatc 1320
>gb|BT025324.1| Arabidopsis thaliana At3g48730 mRNA, complete cds Length = 1419 Score = 63.9 bits (32), Expect = 6e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 284 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 343 ||||| |||||||| |||||||| |||||||| || || ||||||| || || |||||| Sbjct: 1361 gtgtgagccaagctagtaaaaccggcctcgaattgagaaggtgccaagtagacaccttct 1302 Query: 344 tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 |||| |||||| | | ||| | ||||||||| |||| ||||||||||| ||||| Sbjct: 1301 tccaacattcctctgaaaaactttccaaacttctctgtatcactcttctttgcatc 1246
>emb|AL133315.1|ATT8P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T8P19 Length = 96679 Score = 63.9 bits (32), Expect = 6e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 284 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 343 ||||| |||||||| |||||||| |||||||| || || ||||||| || || |||||| Sbjct: 87047 gtgtgagccaagctagtaaaaccggcctcgaattgagaaggtgccaagtagacaccttct 86988 Query: 344 tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 |||| |||||| | | ||| | ||||||||| |||| ||||||||||| ||||| Sbjct: 86987 tccaacattcctctgaaaaactttccaaacttctctgtatcactcttctttgcatc 86932
>emb|BX824602.1|CNS0A5PJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZG05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1512 Score = 63.9 bits (32), Expect = 6e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 284 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 343 ||||| |||||||| |||||||| |||||||| || || ||||||| || || |||||| Sbjct: 1398 gtgtgagccaagctagtaaaaccggcctcgaattgagaaggtgccaagtagacaccttct 1339 Query: 344 tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 |||| |||||| | | ||| | ||||||||| |||| ||||||||||| ||||| Sbjct: 1338 tccaacattcctctgaaaaactttccaaacttctctgtatcactcttctttgcatc 1283
>emb|BX842127.1|CNS09YB6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS33ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1514 Score = 63.9 bits (32), Expect = 6e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 284 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 343 ||||| |||||||| |||||||| |||||||| || || ||||||| || || |||||| Sbjct: 1337 gtgtgagccaagctagtaaaaccggcctcgaattgagaaggtgccaagtagacaccttct 1278 Query: 344 tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 |||| |||||| | | ||| | ||||||||| |||| ||||||||||| ||||| Sbjct: 1277 tccaacattcctctgaaaaactttccaaacttctctgtatcactcttctttgcatc 1222
>gb|U10278.1|ATU10278 Arabidopsis thaliana Columbia glutamate-1-semialdehyde aminotransferase (gsa2) gene, complete cds Length = 2416 Score = 63.9 bits (32), Expect = 6e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 284 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 343 ||||| |||||||| |||||||| |||||||| || || ||||||| || || |||||| Sbjct: 2201 gtgtgagccaagctagtaaaaccggcctcgaattgagaaggtgccaagtagacaccttct 2142 Query: 344 tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 |||| |||||| | | ||| | ||||||||| |||| ||||||||||| ||||| Sbjct: 2141 tccaacattcctctgaaaaactttccaaacttctctgtatcactcttctttgcatc 2086
>emb|X65974.1|NTGSAMR2 N.tabacum mRNA for glutamate-1-semialdehyde aminotransferase Length = 1715 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 284 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 343 |||||||| ||||| ||||| || ||||| ||||| |||||||| | ||| || ||||| Sbjct: 1483 gtgtgtgctaagctagtaaatccagcctcaaactgtgatggtgcaaaatatacaccttcc 1424 Query: 344 tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 ||||||||||| | | ||| || ||||| || |||| ||||||||||| ||||| Sbjct: 1423 tccagcattcccctatagaatctgccaaatttttctgtatcactcttctttgcatc 1368
>emb|X65973.1|NTGSAMR1 N.tabacum mRNA for glutamate-1-semialdehyde aminotransferase Length = 1733 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 284 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 343 |||||||| ||||| ||||| || ||||| ||||| |||||||| | ||| || ||||| Sbjct: 1489 gtgtgtgctaagctagtaaatccagcctcaaactgtgatggtgcaaaatatacaccttcc 1430 Query: 344 tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 ||||||||||| | | ||| || ||||| || |||| ||||||||||| ||||| Sbjct: 1429 tccagcattcccctatagaatctgccaaatttttctgtatcactcttctttgcatc 1374
>gb|AF366293.1| Brassica napus glutamate 1-semialdehyde aminotransferase (Gsa) mRNA, complete cds; nuclear gene for chloroplast product Length = 1651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 284 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 343 ||||| |||||||| ||||| || || || ||||| || ||||| | || || |||||| Sbjct: 1415 gtgtgagccaagctagtaaacccagcttcaaactgagagggtgcaaagtaaacaccttct 1356 Query: 344 tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 |||| |||||| | | |||||| ||||||||| | ||||| |||||||||||||| Sbjct: 1355 tccaacattcccctgaagaacctaccaaacttctccgtgtcgctcttcttggcatc 1300
>gb|AF364595.1| Brassica napus glutamate 1-semialdehyde aminotransferase enzyme mRNA, complete cds; chloroplast gene for chloroplast product Length = 1695 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Minus Query: 284 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 343 ||||| |||||||| ||||| || ||||||||||| || ||||| | || || ||||| Sbjct: 1433 gtgtgagccaagctagtaaacccagcctcgaactgagacggtgcaaagtaaacaccttcc 1374 Query: 344 tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatca 403 |||| |||||| | | ||| | ||||||||| | || || ||||||||||| ||| || Sbjct: 1373 tccaacattcctctgaaaaacttaccaaacttctccgtatcgctcttcttggcgtcagca 1314 Query: 404 aagttgtgcactgggccacctgcgaagaagaatccgaacat 444 ||||||| ||| || || | ||||| ||||| |||||||| Sbjct: 1313 aagttgtacaccggaccttcagcgaaaaagaaaccgaacat 1273
>gb|U20260.1|GMU20260 Glycine max glutamate 1-semialdehyde aminotransferase (Gsa1) gene, complete cds Length = 1974 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Minus Query: 287 tgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttcttcc 346 ||||||||||| || || || ||||| |||||||| ||||||| ||| || ||||| || Sbjct: 1731 tgtgccaagctggtgaagccagcctcaaactgggaaggtgccaaatagacaccttccgcc 1672 Query: 347 agcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 |||||||| | |||||| ||||||| || || |||||||| |||||||| Sbjct: 1671 agcattccccaaaagaacctagcaaacttggccgtatcactctttttggcatc 1619
>gb|L12453.1|SOYGSA Soybean glutamate 1-semialdehyde aminotransferase mRNA, complete cds Length = 1822 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Minus Query: 287 tgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttcttcc 346 ||||||||||| || || || ||||| |||||||| ||||||| ||| || ||||| || Sbjct: 1405 tgtgccaagctggtgaagccagcctcaaactgggaaggtgccaaatagacaccttccgcc 1346 Query: 347 agcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 |||||||| | |||||| ||||||| || || |||||||| |||||||| Sbjct: 1345 agcattccccaaaagaacctagcaaacttggccgtatcactctttttggcatc 1293
>emb|AL627265.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 1/20 Length = 251050 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 320 gatggtgccagatacacgccttcttccagcat 351 ||||| ||||||||||||||||| |||||||| Sbjct: 234313 gatggcgccagatacacgccttcctccagcat 234344
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 320 gatggtgccagatacacgccttcttccagcat 351 ||||| ||||||||||||||||| |||||||| Sbjct: 234304 gatggcgccagatacacgccttcctccagcat 234335
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 437 ccgaacatgcctctgatgtgtcctccacacatctcgtg 474 ||||||||||| |||||||| || ||||||| |||||| Sbjct: 475747 ccgaacatgccactgatgtgcccaccacacacctcgtg 475710
>gb|AE017128.1| Yersinia pestis biovar Medievalis str. 91001 section 2 of 16 of the complete genome Length = 290803 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 323 ggtgccagatacacgccttcttccagcat 351 ||||||||||| || |||||||||||||| Sbjct: 17522 ggtgccagatagaccccttcttccagcat 17550
>gb|AF404302.1| Capra hircus sex-specific gonadal PISRT1 mRNA, complete sequence Length = 48420 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 aaaatacaatacaaaactaaa 155 ||||||||||||||||||||| Sbjct: 6964 aaaatacaatacaaaactaaa 6944
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 323 ggtgccagatacacgccttcttccagcat 351 ||||||||||| || |||||||||||||| Sbjct: 894824 ggtgccagatagaccccttcttccagcat 894852
>ref|XM_451426.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A09757g predicted mRNA Length = 594 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 gagacaagatactgctgctgc 129 ||||||||||||||||||||| Sbjct: 60 gagacaagatactgctgctgc 80
>gb|AC133099.3| Mus musculus BAC clone RP23-90K8 from chromosome 19, complete sequence Length = 224638 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 132 aacaaaatacaatacaaaactaaac 156 |||||||||||||||||||| |||| Sbjct: 136220 aacaaaatacaatacaaaacaaaac 136244
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 gagacaagatactgctgctgc 129 ||||||||||||||||||||| Sbjct: 855940 gagacaagatactgctgctgc 855920
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 323 ggtgccagatacacgccttcttccagcat 351 ||||||||||| || |||||||||||||| Sbjct: 892378 ggtgccagatagaccccttcttccagcat 892406
>emb|AJ414156.1| Yersinia pestis strain CO92 complete genome; segment 16/20 Length = 220050 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 323 ggtgccagatacacgccttcttccagcat 351 ||||||||||| || |||||||||||||| Sbjct: 203732 ggtgccagatagaccccttcttccagcat 203704
>gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR37K07, complete sequence Length = 157722 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 caaaatacaatacaaaactaa 154 ||||||||||||||||||||| Sbjct: 144141 caaaatacaatacaaaactaa 144161
>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR21J17, complete sequence Length = 174974 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 caaaatacaatacaaaactaa 154 ||||||||||||||||||||| Sbjct: 23560 caaaatacaatacaaaactaa 23580
>emb|AL954652.3| Zebrafish DNA sequence from clone CH211-239O15 in linkage group 4, complete sequence Length = 152900 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tagatgtaataatagtattat 23 ||||||||||||||||||||| Sbjct: 23172 tagatgtaataatagtattat 23152
>gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52 of 83 of the complete sequence Length = 236144 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 caaaatacaatacaaaactaa 154 ||||||||||||||||||||| Sbjct: 151484 caaaatacaatacaaaactaa 151504
>gb|AC174769.1| Gasterosteus aculeatus clone VMRC28-49K14, complete sequence Length = 135249 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tagtattatgagaagaaaatg 35 ||||||||||||||||||||| Sbjct: 120836 tagtattatgagaagaaaatg 120816
>gb|AC111074.4| Mus musculus chromosome 1, clone RP24-390A1, complete sequence Length = 124758 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 aacagaatacaacagaaggaaaag 198 |||||||||||||||| ||||||| Sbjct: 59231 aacagaatacaacagatggaaaag 59254
>gb|AC102638.13| Mus musculus chromosome 3, clone RP23-406D2, complete sequence Length = 172817 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 aaaatggaggtcgtagccaa 49 |||||||||||||||||||| Sbjct: 78959 aaaatggaggtcgtagccaa 78978
>gb|AF337025.1| Aphidius ervi clone 76 microsatellite sequence Length = 752 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 caacaaaatacaatacaaaa 150 |||||||||||||||||||| Sbjct: 617 caacaaaatacaatacaaaa 598
>gb|AF336994.1| Aphidius ervi clone 74 microsatellite sequence Length = 720 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 caacaaaatacaatacaaaa 150 |||||||||||||||||||| Sbjct: 614 caacaaaatacaatacaaaa 595
>ref|XM_461671.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G03432g) partial mRNA Length = 6618 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 aaaagcttcaaaaggtttgc 213 |||||||||||||||||||| Sbjct: 2536 aaaagcttcaaaaggtttgc 2555
>gb|AE006862.1| Sulfolobus solfataricus P2 section 221 of 272 of the complete genome Length = 11224 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 taactcagaagaagaaaaat 102 |||||||||||||||||||| Sbjct: 6149 taactcagaagaagaaaaat 6168
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 atgtaataatagtattatga 25 |||||||||||||||||||| Sbjct: 61502 atgtaataatagtattatga 61521
>gb|AC134552.4| Mus musculus BAC clone RP24-279K10 from chromosome 8, complete sequence Length = 154774 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 actaacagaatacaacagaaggaa 195 ||||||||||||||||||| |||| Sbjct: 72819 actaacagaatacaacagatggaa 72842
>gb|BT013916.1| Lycopersicon esculentum clone 132913F, mRNA sequence Length = 1637 Score = 40.1 bits (20), Expect = 8.1 Identities = 92/116 (79%) Strand = Plus / Minus Query: 284 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 343 |||||||| ||||| ||||| || ||||| ||||| |||||||| | || || ||||| Sbjct: 1472 gtgtgtgctaagctagtaaatccagcctcaaactgtgatggtgcaaagtaaacaccttcc 1413 Query: 344 tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 |||||||| || | | ||| || ||||| || |||| ||||||||||| ||||| Sbjct: 1412 tccagcatccctctatagaatctgccaaatttttctgtatcactcttctttgcatc 1357
>gb|AC009600.20| Homo sapiens 2 BAC RP11-436K12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 217304 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 tcagccacgtacaaactaac 177 |||||||||||||||||||| Sbjct: 132181 tcagccacgtacaaactaac 132162
>gb|AC122905.3| Mus musculus BAC clone RP23-47A1 from 10, complete sequence Length = 152690 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aaaatacaatacaaaactaa 154 |||||||||||||||||||| Sbjct: 36308 aaaatacaatacaaaactaa 36289
>gb|AC147501.9| Medicago truncatula clone mth2-12n2, complete sequence Length = 140523 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aactcagaagaagaaaaatg 103 |||||||||||||||||||| Sbjct: 93524 aactcagaagaagaaaaatg 93505
>gb|AC151744.23| Medicago truncatula clone mth2-32k10, complete sequence Length = 110897 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 tgcacaacaaaatacaatac 146 |||||||||||||||||||| Sbjct: 22874 tgcacaacaaaatacaatac 22855
>emb|AL031643.1|HS769D20 Human DNA sequence from clone RP4-769D20 on chromosome Xp21.1-21.3 Contains the 5' end of four variants of the DMD gene for dystrophin (muscular dystrophy, Duchenne and Becker types), complete sequence Length = 133889 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atgtaataatagtattatga 25 |||||||||||||||||||| Sbjct: 72862 atgtaataatagtattatga 72843
>emb|AL162493.21| Human DNA sequence from clone RP11-120L14 on chromosome 13, complete sequence Length = 158083 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 caaaatacaatacaaaacta 153 |||||||||||||||||||| Sbjct: 120819 caaaatacaatacaaaacta 120800
>emb|CR933103.10| Zebrafish DNA sequence from clone CH211-147G15 in linkage group 8, complete sequence Length = 147936 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aacaaaatacaatacaaaac 151 |||||||||||||||||||| Sbjct: 118571 aacaaaatacaatacaaaac 118552
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 ctgctgcacaacaaaataca 142 |||||||||||||||||||| Sbjct: 744838 ctgctgcacaacaaaataca 744857
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 aaaagcttcaaaaggtttgc 213 |||||||||||||||||||| Sbjct: 253805 aaaagcttcaaaaggtttgc 253824
>emb|BX883051.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 10/11 Length = 348946 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 gagagtgtggattccagcag 587 |||||||||||||||||||| Sbjct: 95157 gagagtgtggattccagcag 95138
>emb|AL603793.4| Mouse DNA sequence from clone RP23-131A14 on chromosome 11, complete sequence Length = 201815 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 aacagaatacaacagaaggaaaag 198 |||||||||||||||| ||||||| Sbjct: 51642 aacagaatacaacagatggaaaag 51619
>emb|BX629343.11| Zebrafish DNA sequence from clone DKEY-66M17 in linkage group 13, complete sequence Length = 207677 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 123 ctgctgcacaacaaaatacaatacaaaa 150 |||||||||||||||| ||||| ||||| Sbjct: 16971 ctgctgcacaacaaaacacaatgcaaaa 16998
>gb|AF411807.1| Lycopersicon esculentum BAC clone Clemson_Id 127E11, complete sequence Length = 95845 Score = 40.1 bits (20), Expect = 8.1 Identities = 92/116 (79%) Strand = Plus / Plus Query: 284 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 343 |||||||| ||||| ||||| || ||||| ||||| |||||||| | || || ||||| Sbjct: 87252 gtgtgtgctaagctagtaaatccagcctcaaactgtgatggtgcaaagtaaacaccttcc 87311 Query: 344 tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 |||||||| || | | ||| || ||||| || |||| ||||||||||| ||||| Sbjct: 87312 tccagcatccctctatagaatctgccaaatttttctgtatcactcttctttgcatc 87367
>gb|AC093432.2| Homo sapiens chromosome 1 clone RP11-136D19, complete sequence Length = 174520 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 ctcttcttggcatcatcaaa 405 |||||||||||||||||||| Sbjct: 133510 ctcttcttggcatcatcaaa 133491
>emb|BX784035.4| Zebrafish DNA sequence from clone CH211-233O18 in linkage group 1, complete sequence Length = 66194 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 89 agaagaagaaaaatgggctagagacaag 116 ||||||||||||||||| |||| ||||| Sbjct: 49336 agaagaagaaaaatgggttagaaacaag 49309
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 gaaccttctcggcagcctcc 259 |||||||||||||||||||| Sbjct: 1682005 gaaccttctcggcagcctcc 1681986
>gb|AC015723.8|AC015723 Homo sapiens chromosome , clone RP11-168G16, complete sequence Length = 163386 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 agacaaaatcaccccaaatg 81 |||||||||||||||||||| Sbjct: 142430 agacaaaatcaccccaaatg 142411
>gb|AC025750.10| Homo sapiens BAC clone RP11-804P20 from 2, complete sequence Length = 151367 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tcttcttggcatcatcaaag 406 |||||||||||||||||||| Sbjct: 76577 tcttcttggcatcatcaaag 76558
>gb|AC138655.1| Homo sapiens BAC clone RP11-436K12 from 2, complete sequence Length = 139150 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 tcagccacgtacaaactaac 177 |||||||||||||||||||| Sbjct: 54028 tcagccacgtacaaactaac 54009
>gb|AC093756.3| Homo sapiens BAC clone RP11-56A1 from 2, complete sequence Length = 158073 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gaactgggatggtgccagat 332 |||||||||||||||||||| Sbjct: 133577 gaactgggatggtgccagat 133596
>gb|AC148974.5| Mus musculus BAC clone RP24-165K23 from chromosome y, complete sequence Length = 200783 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 aacagaatacaacagaaggaaaag 198 |||||||||||||||| ||||||| Sbjct: 116333 aacagaatacaacagatggaaaag 116310
>emb|BX469897.6| Zebrafish DNA sequence from clone CH211-39F22 in linkage group 4, complete sequence Length = 186500 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 caacaaaatacaatacaaaa 150 |||||||||||||||||||| Sbjct: 174828 caacaaaatacaatacaaaa 174809
>emb|CT573025.12| Mouse DNA sequence from clone RP23-36H17 on chromosome 14, complete sequence Length = 116550 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 aacagaatacaacagaaggaaaag 198 |||||||||||| ||||||||||| Sbjct: 28082 aacagaatacaaaagaaggaaaag 28059
>gb|AC154698.2| Mus musculus BAC clone RP23-137A20 from 14, complete sequence Length = 197874 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 aacagaatacaacagaaggaaaag 198 |||||||||||| ||||||||||| Sbjct: 45302 aacagaatacaaaagaaggaaaag 45325
>gb|AC117231.4| Mus musculus BAC clone RP23-394M5 from 8, complete sequence Length = 195936 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ctagagacaagatactgctg 125 |||||||||||||||||||| Sbjct: 92460 ctagagacaagatactgctg 92479
>emb|BX511192.4| Zebrafish DNA sequence from clone DKEYP-89C11 in linkage group 4, complete sequence Length = 154256 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 cacaacaaaatacaatacaaaact 152 ||||| |||||||||||||||||| Sbjct: 77522 cacaataaaatacaatacaaaact 77499
>emb|AL157971.4|CNS01RGG Human chromosome 14 DNA sequence BAC R-933I1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176368 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tagatgtaataatagtatta 22 |||||||||||||||||||| Sbjct: 102841 tagatgtaataatagtatta 102822
>dbj|AP000757.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-728F11, complete sequences Length = 184926 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ctgctgctgcacaacaaaat 139 |||||||||||||||||||| Sbjct: 129318 ctgctgctgcacaacaaaat 129299
>gb|U52151.1|APU52151 Aspergillus parasiticus polyketide synthase PKSL2 (pksL2) gene, complete cds Length = 9894 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cagaagaagaaaaatgggct 107 |||||||||||||||||||| Sbjct: 9645 cagaagaagaaaaatgggct 9626
>gb|AC125369.4| Mus musculus BAC clone RP24-380D10 from 8, complete sequence Length = 169338 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 aacagaatacaacagaaggaaaag 198 |||||||||||| ||||||||||| Sbjct: 126262 aacagaatacaagagaaggaaaag 126285
>gb|AC134435.3| Mus musculus BAC clone RP24-423J19 from 1, complete sequence Length = 225687 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 aacagaatacaacagaaggaaaag 198 |||||||||||||||| ||||||| Sbjct: 82888 aacagaatacaacagatggaaaag 82865
>gb|AC131685.4| Mus musculus BAC clone RP23-372G24 from 1, complete sequence Length = 163474 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 aacagaatacaacagaaggaaaag 198 |||||||||||||||| ||||||| Sbjct: 95298 aacagaatacaacagatggaaaag 95275
>gb|M11813.1|PZACG Bacteriophage PZA (from B.subtilis), complete genome Length = 19366 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agtattatgagaagaaaatg 35 |||||||||||||||||||| Sbjct: 2000 agtattatgagaagaaaatg 2019
>emb|AL844863.7| Mouse DNA sequence from clone RP23-273C23 on chromosome X, complete sequence Length = 143387 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 aacaaaatacaatacaaaactaaa 155 |||||||||||| ||||||||||| Sbjct: 42533 aacaaaatacaaaacaaaactaaa 42510
>emb|AL683881.12| Mouse DNA sequence from clone RP23-10M6 on chromosome 2, complete sequence Length = 155168 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aacaaaatacaatacaaaac 151 |||||||||||||||||||| Sbjct: 154728 aacaaaatacaatacaaaac 154709
>gb|L39279.1|TOMGSAAM Lycopersicon esculentum (clone GFPGSAAM) glutamate 1-semialdehyde 2,1-aminomutase mRNA, complete cds Length = 1664 Score = 40.1 bits (20), Expect = 8.1 Identities = 92/116 (79%) Strand = Plus / Minus Query: 284 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 343 |||||||| ||||| ||||| || ||||| ||||| |||||||| | || || ||||| Sbjct: 1412 gtgtgtgctaagctagtaaatccagcctcaaactgtgatggtgcaaagtaaacaccttcc 1353 Query: 344 tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 399 |||||||| || | | ||| || ||||| || |||| ||||||||||| ||||| Sbjct: 1352 tccagcatccctctatagaatctgccaaatttttctgtatcactcttctttgcatc 1297
>emb|AL713871.8| Mouse DNA sequence from clone RP23-40P1 on chromosome X, complete sequence Length = 230701 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 aacagaatacaacagaaggaaaag 198 ||||||||||||||| |||||||| Sbjct: 33948 aacagaatacaacaggaggaaaag 33925
>emb|AL844493.6| Mouse DNA sequence from clone RP23-396G18 on chromosome 2, complete sequence Length = 166025 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aacaaaatacaatacaaaac 151 |||||||||||||||||||| Sbjct: 1560 aacaaaatacaatacaaaac 1541
>gb|U03632.1|CRU03632 Chlamydomonas reinhardtii NO- glutamate-1-semialdehyde aminotransferase (gsa) mRNA, complete cds Length = 2002 Score = 40.1 bits (20), Expect = 8.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 308 gcctcgaactgggatggtgccagatacacgccttcttccagcattccacggtggaa 363 ||||||||||| || || ||||| || ||||| || |||||||| || |||||||| Sbjct: 1329 gcctcgaactgcgagggagccaggtagacgccctcctccagcatgccgcggtggaa 1274 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,491,482 Number of Sequences: 3902068 Number of extensions: 6491482 Number of successful extensions: 133913 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 133569 Number of HSP's gapped (non-prelim): 345 length of query: 598 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 575 effective length of database: 17,143,297,704 effective search space: 9857396179800 effective search space used: 9857396179800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)