>ATU2_YEAST (P38995) Copper-transporting ATPase (EC 3.6.3.4) (Cu(2+)-ATPase)|
          Length = 1004

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +2

Query: 41  ERNRSQLTTCYNLQGTIE-RTVTHHDDTRTWQTTILMSTSLQVTLILLHPA*PFLW 205
           ER   + T   NL  T + R ++  D+ R W+   + ST L +  +LL+   P +W
Sbjct: 224 ERTGYKFTVFSNLDNTTQLRLLSKEDEIRFWKKNSIKSTLLAIICMLLYMIVPMMW 279

>MCRS1_MOUSE (Q99L90) Microspherule protein 1 (58 kDa microspherule protein)|
          Length = 462

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -3

Query: 603 GNHRLNSPKIVGSPRRRSAGKNIPGLEHVDEARRKAILQELRRMKAAGR*SSQRCYG 433
           G  R +S  +   P+RRS+ + I   +  DE    ++ +   R+K AG   S RC G
Sbjct: 30  GQKRASSQALGTIPKRRSSSRFIKRKKFDDELVESSLAKSSTRVKGAGGVESGRCSG 86

>RPTN_MOUSE (P97347) Repetin|
          Length = 1130

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +2

Query: 221  TSDSKCTQSEIQGSTGTGQR*AGLSTDELETDEAQQHGCQSSSPAAKQSRVQI 379
            +  S C QSEI  +   GQ    L TD    D   +H  +S   + + SR ++
Sbjct: 854  SQSSHCGQSEIGKTENQGQNRHSLGTDRTRRDSYVEHSGRSGKLSQQNSREEV 906

>HOX1A_MAIZE (P46605) Homeobox protein HOX1A|
          Length = 719

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -3

Query: 573 VGSPRRRSAGKNIPGLEHVDEARRKAILQELRRMK 469
           VG  +  SA    PG +  ++AR+KAI QELR+ K
Sbjct: 682 VGGSKVDSAEDQNPGPDLAEKARQKAIQQELRKKK 716


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,165,273
Number of Sequences: 219361
Number of extensions: 1624182
Number of successful extensions: 3788
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3787
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)