Clone Information

BLAST Search Result

Clone Name	rbags14i12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	AAKG2_MOUSE (Q91WG5) 5'-AMP-activated protein kinase, gamma-2 su...	79	1e-14
2	AAKG2_HUMAN (Q9UGJ0) 5'-AMP-activated protein kinase, gamma-2 su...	76	1e-13
3	AAKG2_PONPY (Q5R4S0) 5'-AMP-activated protein kinase, gamma-2 su...	75	2e-13
4	YL28_SCHPO (Q10343) Hypothetical protein C1556.08c in chromosome I	75	2e-13
5	AAKG3_HUMAN (Q9UGI9) 5'-AMP-activated protein kinase, gamma-3 su...	75	3e-13
6	AAKG3_PIG (Q9MYP4) 5'-AMP-activated protein kinase, gamma-3 subu...	74	4e-13
7	AAKG1_HUMAN (P54619) 5'-AMP-activated protein kinase, gamma-1 su...	73	1e-12
8	AAKG1_PIG (Q09138) 5'-AMP-activated protein kinase, gamma-1 subu...	73	1e-12
9	AAKG1_BOVIN (P58108) 5'-AMP-activated protein kinase, gamma-1 su...	73	1e-12
10	AAKG3_MOUSE (Q8BGM7) 5'-AMP-activated protein kinase, gamma-3 su...	72	1e-12
11	AAKG1_RAT (P80385) 5'-AMP-activated protein kinase, gamma-1 subu...	72	2e-12
12	AAKG1_MOUSE (O54950) 5'-AMP-activated protein kinase, gamma-1 su...	72	2e-12
13	SNF4_YEAST (P12904) Nuclear protein SNF4 (Regulatory protein CAT3)	71	3e-12
14	SNF4_KLULA (Q9P869) Nuclear protein SNF4	58	3e-08
15	YGF6_YEAST (P53172) Hypothetical 58.1 kDa protein in UBC2-OLE1 i...	44	7e-04
16	IMDH_CHLTE (Q8KCW4) Inosine-5'-monophosphate dehydrogenase (EC 1...	38	0.038
17	YB64_YEAST (P38314) Protein YBR214W	38	0.038
18	IMDH_PYRHO (O58045) Inosine-5'-monophosphate dehydrogenase (EC 1...	36	0.15
19	IMDH_PYRFU (P42851) Inosine-5'-monophosphate dehydrogenase (EC 1...	36	0.15
20	E2AK4_MOUSE (Q9QZ05) Eukaryotic translation initiation factor 2-...	36	0.15
21	Y922_METJA (Q58332) Hypothetical protein MJ0922	34	0.42
22	Y525_METKA (P50100) Hypothetical protein MK0525 (OrfX)	33	0.94
23	IMDH_PYRAB (Q9UY49) Inosine-5'-monophosphate dehydrogenase (EC 1...	33	0.94
24	Y067_PSYAR (Q4FVL7) UPF0090 protein Psyc_0067	32	2.1
25	CBS_YEAST (P32582) Cystathionine beta-synthase (EC 4.2.1.22) (Se...	31	3.6
26	IBP2_RAT (P12843) Insulin-like growth factor-binding protein 2 p...	30	6.1
27	COG2_CAEEL (Q21444) Conserved oligomeric Golgi complex component...	30	8.0
28	IMDH_METJA (Q59011) Inosine-5'-monophosphate dehydrogenase (EC 1...	30	8.0

>AAKG2_MOUSE (Q91WG5) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK|
           gamma-2 chain) (AMPK gamma2)
          Length = 566

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 63/217 (29%), Positives = 107/217 (49%)
 Frame = -1

Query: 697 RPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFLCSKLQE 518
           +PLV++    +L D   ++I+N+I  +P+      ISG  L  L T   ILKFL   + +
Sbjct: 356 KPLVNISPDASLFDAVYSLIKNKIHRLPVIDP---ISGNALYIL-THKRILKFLQLFMSD 411

Query: 517 QPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLITCLDFLLEDRISSIPIVD 338
            P+    ++  +  + IGT+           +       P+I  L+  +E RIS++P+VD
Sbjct: 412 MPKP-AFMKQNLDELGIGTY---------HNIAFIHPDTPIIKALNIFVERRISALPVVD 461

Query: 337 DNGSLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQYQVNGRRPCHTCLSTSTLLE 158
           ++G ++D+YS  D++ LA    Y  +    +TV  A  LQ++         C    TL  
Sbjct: 462 ESGKVVDIYSKFDVINLAAEKTYNNL---DITVTQA--LQHRSQYFEGVVKCSKLETLET 516

Query: 157 VLDQLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
           ++D++    V RLV +     S+ GIISL D +  L+
Sbjct: 517 IVDRIVRAEVHRLVVVNE-ADSIVGIISLSDILQALI 552

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>AAKG2_HUMAN (Q9UGJ0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK|
           gamma-2 chain) (AMPK gamma2) (H91620p)
          Length = 569

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 62/217 (28%), Positives = 106/217 (48%)
 Frame = -1

Query: 697 RPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFLCSKLQE 518
           +PLV++    +L D   ++I+N+I  +P+      ISG  L  L T   ILKFL   + +
Sbjct: 359 KPLVNISPDASLFDAVYSLIKNKIHRLPVIDP---ISGNALYIL-THKRILKFLQLFMSD 414

Query: 517 QPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLITCLDFLLEDRISSIPIVD 338
            P+    ++  +  + IGT+           +       P+I  L+  +E RIS++P+VD
Sbjct: 415 MPKP-AFMKQNLDELGIGTY---------HNIAFIHPDTPIIKALNIFVERRISALPVVD 464

Query: 337 DNGSLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQYQVNGRRPCHTCLSTSTLLE 158
           ++G ++D+YS  D++ LA    Y  +    +TV  A  LQ++         C     L  
Sbjct: 465 ESGKVVDIYSKFDVINLAAEKTYNNL---DITVTQA--LQHRSQYFEGVVKCNKLEILET 519

Query: 157 VLDQLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
           ++D++    V RLV +     S+ GIISL D +  L+
Sbjct: 520 IVDRIVRAEVHRLVVVNE-ADSIVGIISLSDILQALI 555

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>AAKG2_PONPY (Q5R4S0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK|
           gamma-2 chain) (AMPK gamma2)
          Length = 524

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 62/217 (28%), Positives = 106/217 (48%)
 Frame = -1

Query: 697 RPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFLCSKLQE 518
           +PLV++    +L D   ++I+N+I  +P+      ISG  L  L T   ILKFL   + +
Sbjct: 314 KPLVNISPDASLLDAVYSLIKNKIHRLPVIDP---ISGNALYIL-THKRILKFLQLFMSD 369

Query: 517 QPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLITCLDFLLEDRISSIPIVD 338
            P+    ++  +  + IGT+           +       P+I  L+  +E RIS++P+VD
Sbjct: 370 MPKP-AFMKQNLDELGIGTY---------HNIAFIHPDTPIIKALNIFVERRISALPVVD 419

Query: 337 DNGSLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQYQVNGRRPCHTCLSTSTLLE 158
           ++G ++D+YS  D++ LA    Y  +    +TV  A  LQ++         C     L  
Sbjct: 420 ESGKVVDIYSKFDVINLAAEKTYNNL---DITVTQA--LQHRSQYFEGVVKCNKLEILET 474

Query: 157 VLDQLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
           ++D++    V RLV +     S+ GIISL D +  L+
Sbjct: 475 IVDRIVRAEVHRLV-VANEADSIVGIISLSDILQALI 510

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>YL28_SCHPO (Q10343) Hypothetical protein C1556.08c in chromosome I|
          Length = 334

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 55/214 (25%), Positives = 102/214 (47%)
 Frame = -1

Query: 688 VHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFLCSKLQEQPE 509
           ++V    +L D  L + ++    +P+     +     ++++ T   ILKF+    +E   
Sbjct: 120 IYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKETA- 178

Query: 508 GYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLITCLDFLLEDRISSIPIVDDNG 329
              +LR  ++ + IGTWS          L T+ +   +   +  L E  IS++PIV+  G
Sbjct: 179 ---MLRVPLNQMTIGTWSN---------LATASMETKVYDVIKMLAEKNISAVPIVNSEG 226

Query: 328 SLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQYQVNGRRPCHTCLSTSTLLEVLD 149
           +LL+VY   D+M L ++  Y+   L+    E  L+     +G    HTC +T  L  + D
Sbjct: 227 TLLNVYESVDVMHLIQDGDYS--NLDLSVGEALLKRPANFDG---VHTCRATDRLDGIFD 281

Query: 148 QLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
            +    V RL  ++   K ++GI+SL D + +++
Sbjct: 282 AIKHSRVHRLFVVDENLK-LEGILSLADILNYII 314

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>AAKG3_HUMAN (Q9UGI9) 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK|
           gamma-3 chain) (AMPK gamma3)
          Length = 489

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 2/219 (0%)
 Frame = -1

Query: 697 RPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFL--CSKL 524
           +PLV +  +D+L +   T+I+N I  +P+      +SG  +L++ T   +LKFL     L
Sbjct: 282 KPLVSISPNDSLFEAVYTLIKNRIHRLPVLDP---VSG-NVLHILTHKRLLKFLHIFGSL 337

Query: 523 QEQPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLITCLDFLLEDRISSIPI 344
             +P     L   I  + IGT+         R L     +AP++T LD  ++ R+S++P+
Sbjct: 338 LPRPS---FLYRTIQDLGIGTF---------RDLAVVLETAPILTALDIFVDRRVSALPV 385

Query: 343 VDDNGSLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQYQVNGRRPCHTCLSTSTL 164
           V++ G ++ +YS  D++ LA    Y       L +     L+ +        +C    +L
Sbjct: 386 VNECGQVVGLYSRFDVIHLAAQQTY-----NHLDMSVGEALRQRTLCLEGVLSCQPHESL 440

Query: 163 LEVLDQLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
            EV+D+++   V RLV ++  T+ + G++SL D +  L+
Sbjct: 441 GEVIDRIAREQVHRLVLVDE-TQHLLGVVSLSDILQALV 478

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>AAKG3_PIG (Q9MYP4) 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK|
           gamma-3 chain) (AMPK gamma3)
          Length = 514

 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
 Frame = -1

Query: 697 RPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFL--CSKL 524
           +PLV +  +D+L +    +I+N I  +P+      +SG  +L++ T   +LKFL     L
Sbjct: 307 KPLVSISPNDSLFEAVYALIKNRIHRLPVLDP---VSGA-VLHILTHKRLLKFLHIFGTL 362

Query: 523 QEQPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLITCLDFLLEDRISSIPI 344
             +P     L   I  + IGT+         R L     +AP++T LD  ++ R+S++P+
Sbjct: 363 LPRPS---FLYRTIQDLGIGTF---------RDLAVVLETAPILTALDIFVDRRVSALPV 410

Query: 343 VDDNGSLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQYQVNGRRPCHTCLSTSTL 164
           V++ G ++ +YS  D++ LA    Y       L +     L+ +        +C    TL
Sbjct: 411 VNETGQVVGLYSRFDVIHLAAQQTY-----NHLDMNVGEALRQRTLCLEGVLSCQPHETL 465

Query: 163 LEVLDQLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
            EV+D++    V RLV ++  T+ + G++SL D +  L+
Sbjct: 466 GEVIDRIVREQVHRLVLVDE-TQHLLGVVSLSDILQALV 503

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>AAKG1_HUMAN (P54619) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 331

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 56/217 (25%), Positives = 104/217 (47%)
 Frame = -1

Query: 697 RPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFLCSKLQE 518
           +PLV +  + +L D   ++I+N+I  +P+    +  +    L + T   ILKFL   + E
Sbjct: 127 KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNT----LYILTHKRILKFLKLFITE 182

Query: 517 QPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLITCLDFLLEDRISSIPIVD 338
            P+    +   +  + IGT++          +   R + P+   L   ++ R+S++P+VD
Sbjct: 183 FPKP-EFMSKSLEELQIGTYAN---------IAMVRTTTPVYVALGIFVQHRVSALPVVD 232

Query: 337 DNGSLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQYQVNGRRPCHTCLSTSTLLE 158
           + G ++D+YS  D++ LA    Y       L V     LQ++ +       C    TL  
Sbjct: 233 EKGRVVDIYSKFDVINLAAEKTY-----NNLDVSVTKALQHRSHYFEGVLKCYLHETLET 287

Query: 157 VLDQLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
           ++++L    V RLV ++     V+GI+SL D +  L+
Sbjct: 288 IINRLVEAEVHRLVVVDE-NDVVKGIVSLSDILQALV 323

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>AAKG1_PIG (Q09138) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg) (38 kDa subunit)
          Length = 330

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 56/217 (25%), Positives = 104/217 (47%)
 Frame = -1

Query: 697 RPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFLCSKLQE 518
           +PLV +  + +L D   ++I+N+I  +P+    +  +    L + T   ILKFL   + E
Sbjct: 127 KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNT----LYILTHKRILKFLKLFITE 182

Query: 517 QPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLITCLDFLLEDRISSIPIVD 338
            P+    +   +  + IGT++          +   R + P+   L   ++ R+S++P+VD
Sbjct: 183 FPKP-EFMSKSLEELQIGTYAN---------IAMVRTTTPVYVALGIFVQHRVSALPVVD 232

Query: 337 DNGSLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQYQVNGRRPCHTCLSTSTLLE 158
           + G ++D+YS  D++ LA    Y       L V     LQ++ +       C    TL  
Sbjct: 233 EKGRVVDIYSKFDVINLAAEKTY-----NNLDVSVTKALQHRSHYFEGVLKCYLHETLET 287

Query: 157 VLDQLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
           ++++L    V RLV ++     V+GI+SL D +  L+
Sbjct: 288 IINRLVEAEVHRLVVVDE-NDVVKGIVSLSDILQALV 323

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>AAKG1_BOVIN (P58108) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 330

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 56/217 (25%), Positives = 104/217 (47%)
 Frame = -1

Query: 697 RPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFLCSKLQE 518
           +PLV +  + +L D   ++I+N+I  +P+    +  +    L + T   ILKFL   + E
Sbjct: 127 KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNT----LYILTHKRILKFLKLFITE 182

Query: 517 QPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLITCLDFLLEDRISSIPIVD 338
            P+    +   +  + IGT++          +   R + P+   L   ++ R+S++P+VD
Sbjct: 183 FPKP-EFMSKSLEELQIGTYAN---------IAMVRTTTPVYVALGIFVQHRVSALPVVD 232

Query: 337 DNGSLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQYQVNGRRPCHTCLSTSTLLE 158
           + G ++D+YS  D++ LA    Y       L V     LQ++ +       C    TL  
Sbjct: 233 EKGRVVDIYSKFDVINLAAEKTY-----NNLDVSVTKALQHRSHYFEGVLKCYLHETLET 287

Query: 157 VLDQLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
           ++++L    V RLV ++     V+GI+SL D +  L+
Sbjct: 288 IINRLVEAEVHRLVVVDE-NDVVKGIVSLSDILQALV 323

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>AAKG3_MOUSE (Q8BGM7) 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK|
           gamma-3 chain) (AMPK gamma3)
          Length = 489

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 2/219 (0%)
 Frame = -1

Query: 697 RPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFL--CSKL 524
           +PLV +  +D+L +    +I+N I  +P+      +SG  +L + T   +LKFL     L
Sbjct: 282 KPLVSISPNDSLFEAVYALIKNRIHRLPVLDP---VSGT-VLYILTHKRLLKFLHIFGAL 337

Query: 523 QEQPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLITCLDFLLEDRISSIPI 344
             +P     L   I  + IGT+         R L     +AP++T LD  ++ R+S++P+
Sbjct: 338 LPRPS---FLCRTIQDLGIGTF---------RDLAVVLETAPVLTALDIFVDRRVSALPV 385

Query: 343 VDDNGSLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQYQVNGRRPCHTCLSTSTL 164
           V+++G ++ +YS  D++ LA    Y       L +     L+ +        +C    +L
Sbjct: 386 VNESGQVVGLYSRFDVIHLAAQQTY-----NHLDMSVGEALRQRTLCLEGVLSCQPHESL 440

Query: 163 LEVLDQLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
            EV+D+++   V RLV ++  T+ + G++SL D +  L+
Sbjct: 441 GEVIDRIAREQVHRLVLVDE-TQHLLGVVSLSDILQALV 478

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>AAKG1_RAT (P80385) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 330

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 56/217 (25%), Positives = 104/217 (47%)
 Frame = -1

Query: 697 RPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFLCSKLQE 518
           +PLV +  + +L D   ++I+N+I  +P+    +  +    L + T   ILKFL   + E
Sbjct: 126 KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNT----LYILTHKRILKFLKLFITE 181

Query: 517 QPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLITCLDFLLEDRISSIPIVD 338
            P+    +   +  + IGT++          +   R + P+   L   ++ R+S++P+VD
Sbjct: 182 FPKP-EFMSKSLEELQIGTYAN---------IAMVRTTTPVYVALGIFVQHRVSALPVVD 231

Query: 337 DNGSLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQYQVNGRRPCHTCLSTSTLLE 158
           + G ++D+YS  D++ LA    Y       L V     LQ++ +       C    TL  
Sbjct: 232 EKGRVVDIYSKFDVINLAAEKTY-----NNLDVSVTKALQHRSHYFEGVLKCYLHETLEA 286

Query: 157 VLDQLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
           ++++L    V RLV ++     V+GI+SL D +  L+
Sbjct: 287 IINRLVEAEVHRLVVVDE-HDVVKGIVSLSDILQALV 322

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>AAKG1_MOUSE (O54950) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 330

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 56/217 (25%), Positives = 104/217 (47%)
 Frame = -1

Query: 697 RPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFLCSKLQE 518
           +PLV +  + +L D   ++I+N+I  +P+    +  +    L + T   ILKFL   + E
Sbjct: 126 KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNT----LYILTHKRILKFLKLFITE 181

Query: 517 QPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLITCLDFLLEDRISSIPIVD 338
            P+    +   +  + IGT++          +   R + P+   L   ++ R+S++P+VD
Sbjct: 182 FPKP-EFMSKSLQELQIGTYAN---------IAMVRTTTPVYVALGIFVQHRVSALPVVD 231

Query: 337 DNGSLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQYQVNGRRPCHTCLSTSTLLE 158
           + G ++D+YS  D++ LA    Y       L V     LQ++ +       C    TL  
Sbjct: 232 EKGRVVDIYSKFDVINLAAEKTY-----NNLDVSVTKALQHRSHYFEGVLKCYLHETLET 286

Query: 157 VLDQLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
           ++++L    V RLV ++     V+GI+SL D +  L+
Sbjct: 287 IINRLVEAEVHRLVVVDE-HDVVKGIVSLSDILQALV 322

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>SNF4_YEAST (P12904) Nuclear protein SNF4 (Regulatory protein CAT3)|
          Length = 322

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 52/235 (22%), Positives = 107/235 (45%), Gaps = 3/235 (1%)
 Frame = -1

Query: 742 KLQYYGGADVA---GMQRRPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLL 572
           KLQ  G  D+    G+ +     +  S  L +  L ++++    +P+     +     ++
Sbjct: 103 KLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVV 162

Query: 571 NLATLPGILKFLCSKLQEQPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLI 392
           ++ T   ILKF+    +E              IPIG  +  T       +++ +++ P+I
Sbjct: 163 SVLTQYRILKFVALNCRE---------THFLKIPIGDLNIIT----QDNMKSCQMTTPVI 209

Query: 391 TCLDFLLEDRISSIPIVDDNGSLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQYQ 212
             +  L + R+SS+PI+D+NG L++VY   D++ L K  +Y       L++     L  +
Sbjct: 210 DVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIY-----NDLSLSVGEALMRR 264

Query: 211 VNGRRPCHTCLSTSTLLEVLDQLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
            +     +TC     L  ++D +    V R   ++ + + V G+++L D + ++L
Sbjct: 265 SDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLV-GVLTLSDILKYIL 318

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>SNF4_KLULA (Q9P869) Nuclear protein SNF4|
          Length = 328

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 52/236 (22%), Positives = 101/236 (42%), Gaps = 4/236 (1%)
 Frame = -1

Query: 742 KLQYYGGADVA---GMQRRPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLL 572
           KLQ  G  D+    G+Q      +     L +  + +I++    +P+     +     ++
Sbjct: 108 KLQLNGLKDIERAIGIQPYDTRSIHPFRPLYEACVKMIESRSRRIPLIDQDEETQREIVV 167

Query: 571 NLATLPGILKFLCSKLQEQPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLI 392
           ++ T   ILKF+    +E       L+  +  + I          ST  + + ++S P+I
Sbjct: 168 SVLTQYRILKFVALNCKE----IRYLKRPLRELDI---------ISTNNIMSCQMSTPVI 214

Query: 391 TCLDFL-LEDRISSIPIVDDNGSLLDVYSLSDIMALAKNDVYTCIKLEQLTVENALELQY 215
             +  L L   +SS+PIVD+ G L++VY   D++ L K  +Y       L++     L  
Sbjct: 215 DVIQLLTLAGGVSSVPIVDEQGKLVNVYEAVDVLGLIKGGIY-----NDLSLSVGEALMR 269

Query: 214 QVNGRRPCHTCLSTSTLLEVLDQLSVPGVRRLVAIEPMTKSVQGIISLRDAITFLL 47
           + +      TC     L  +LD +    V R   ++     + G+++L D + ++L
Sbjct: 270 RSDDFEGVFTCTENDKLSSILDTVRKSRVHRFFVVD-SNGFLTGVLTLSDILKYIL 324

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>YGF6_YEAST (P53172) Hypothetical 58.1 kDa protein in UBC2-OLE1 intergenic|
           region
          Length = 527

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 32/146 (21%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
 Frame = -1

Query: 700 RRPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFLCSKLQ 521
           + P   + +++NL  V + I+ + +  V I    T++    +  + +   ++K+L    +
Sbjct: 188 KNPFYKLPETENLSTV-IGILGSGVHRVAI----TNVEMTQIKGILSQRRLIKYLWENAR 242

Query: 520 EQPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAP--LITCLDFLLEDRISSIP 347
             P   P+L + +  + IG  +    + + +Q R   +     LI  L  +  +RISSI 
Sbjct: 243 SFPNLKPLLDSSLEELNIGVLNAARDKPTFKQSRVISIQGDEHLIMALHKMYVERISSIA 302

Query: 346 IVDDNGSLLDVYSLSDIMALAKNDVY 269
           +VD  G+L+   S++D+  + +   Y
Sbjct: 303 VVDPQGNLIGNISVTDVKHVTRTSQY 328

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>IMDH_CHLTE (Q8KCW4) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 494

 Score = 37.7 bits (86), Expect = 0.038
 Identities = 30/142 (21%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
 Frame = -1

Query: 712 AGMQRRPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLNLATLPGILKFLC 533
           +G+ R P +H+ +   ++D    +I++ IS +P+ +  T                     
Sbjct: 91  SGIIRNP-IHLFEDATIQDAIDLMIRHSISGIPVVEHPT--------------------- 128

Query: 532 SKLQEQPEGYPILRNQISSIPIGTWSQHTGRAST---RQLRTSRLSAPLITCLDFLLEDR 362
                 PEG  +L+  +++  +   +    + +T     L T++    L+T  D L+ ++
Sbjct: 129 ------PEGCLLLKGIVTNRDLRMTASSDEKITTIMTTNLVTAKEGIDLLTAEDILMRNK 182

Query: 361 ISSIPIVDDNGSLLDVYSLSDI 296
           I  + I+DDNG L  + +  DI
Sbjct: 183 IEKLLIIDDNGYLKGLITFKDI 204

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>YB64_YEAST (P38314) Protein YBR214W|
          Length = 527

 Score = 37.7 bits (86), Expect = 0.038
 Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
 Frame = -1

Query: 550 ILKFLCSKLQEQPEGYPILRNQISSIPIGTWSQHTGRASTRQLRTSRLSA--PLITCLDF 377
           ++K+L    +      P+L + +  + IG  +  + + ++RQ R   +    PLI  L  
Sbjct: 246 LIKYLWDNARSFTSLEPLLNSSLQDLHIGVLNIQS-KPTSRQSRVISIQGEEPLIMGLYK 304

Query: 376 LLEDRISSIPIVDDNGSLLDVYSLSDIMALAKNDVY 269
           +  +RISSI ++D  G+LL   S++D+  + +   Y
Sbjct: 305 MHVERISSIAVIDKQGNLLGNISVTDVKHVTRTSQY 340

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>IMDH_PYRHO (O58045) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 486

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 16/51 (31%), Positives = 32/51 (62%)
 Frame = -1

Query: 433 TRQLRTSRLSAPLITCLDFLLEDRISSIPIVDDNGSLLDVYSLSDIMALAK 281
           T+++ T   S  +   L  ++E+RI  +P+VD+ G L+ + ++SD++A  K
Sbjct: 157 TKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207

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>IMDH_PYRFU (P42851) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 485

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 16/51 (31%), Positives = 33/51 (64%)
 Frame = -1

Query: 433 TRQLRTSRLSAPLITCLDFLLEDRISSIPIVDDNGSLLDVYSLSDIMALAK 281
           TR++ T   S  +   L  ++E+RI  +P+V+++G L+ + ++SD++A  K
Sbjct: 157 TREVITVPESVDVEEALKIMMENRIDRLPVVNEDGKLVGLITMSDLVARKK 207

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>E2AK4_MOUSE (Q9QZ05) Eukaryotic translation initiation factor 2-alpha kinase 4|
           (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
          Length = 1648

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
 Frame = -1

Query: 556 PGILKFLCSKLQEQPEGY--PILRNQISSIPIGTWSQHTGRASTRQLRTSRLSAPLITCL 383
           P I+++     +E+ +     IL   +S I + T   H+G     QLR  + +A L+  L
Sbjct: 355 PNIVRYFAMNSREEEDSIVIDILAEHVSGISLATHLSHSGPVPAHQLR--KYTAQLLAGL 412

Query: 382 DFLLEDRI------SSIPIVDDNGSL-LDVYSLSDIMA-LAKNDVY 269
           D+L  + +      +S  +VD  G++ +  YS+S  +A + K DV+
Sbjct: 413 DYLHSNSVVHKVLSASSVLVDAEGTVKITDYSISKRLADICKEDVF 458

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>Y922_METJA (Q58332) Hypothetical protein MJ0922|
          Length = 138

 Score = 34.3 bits (77), Expect = 0.42
 Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
 Frame = -1

Query: 433 TRQLRTSRLSAPLITCLDFLLEDRISSIPIVDDNGSLLDVYSLSDIMALAKNDVYTCIKL 254
           T+ + T++    ++   + +L+ +ISS+P++DD   ++ + + +DI      D YT    
Sbjct: 15  TKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTL--- 71

Query: 253 EQLTVENALELQYQVNGRRPCHTCLSTSTLLEVLDQLSVPG-----VRRLVAIEPMTKSV 89
            + T+ + +         +   T    +++LE + ++ + G     + +L  ++   K V
Sbjct: 72  -ETTIGDVM--------TKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLV 122

Query: 88  QGIISLRDAI 59
            GIIS  D I
Sbjct: 123 -GIISDGDII 131

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>Y525_METKA (P50100) Hypothetical protein MK0525 (OrfX)|
          Length = 196

 Score = 33.1 bits (74), Expect = 0.94
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
 Frame = -1

Query: 409 LSAPLIT---------CLDFLLEDRISSIPIVDDNGSLLDVYSLSDIMALAKNDVYTC-- 263
           +S P+IT          +  +++  I  +PIVDDNG L+ + ++ DI+ +    V T   
Sbjct: 76  MSQPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVEPYLVATIEE 135

Query: 262 -IKLEQLTVENALELQYQVNGRRPCHTCLSTSTLLEVLD 149
            +K  Q  +E   E+   + G   C  C + S  L  +D
Sbjct: 136 EMKKFQEELEELEEVSEIIEG--VCDLCETYSEELRFVD 172

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>IMDH_PYRAB (Q9UY49) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 485

 Score = 33.1 bits (74), Expect = 0.94
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = -1

Query: 385 LDFLLEDRISSIPIVDDNGSLLDVYSLSDIMALAK 281
           L  ++E+RI  +P+VD  G L+ + ++SD++A  K
Sbjct: 173 LKIMIENRIDRLPVVDKEGRLIGLITMSDLVARKK 207

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>Y067_PSYAR (Q4FVL7) UPF0090 protein Psyc_0067|
          Length = 166

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
 Frame = -1

Query: 442 RASTRQLRTSRLSAPLITCLDFLLEDRISSIPIVDDNGSLLDVYSLSDIMALAKNDVYTC 263
           + ST+    + + AP +   D  L   I   P    N SLL +Y    I AL +      
Sbjct: 2   KLSTKVTELTNIIAPAVAACDVALWG-IEFAP--QGNRSLLRIY----IEALPEEQAQN- 53

Query: 262 IKLEQLTVENALELQYQVNGRRPCHTCLSTSTLLEVLDQLSVPGV-RRLVAIEPMTKSVQ 86
              +Q+T+EN   + +QV+G    H  ++   +LEV    S PG  R   + E M   V 
Sbjct: 54  ---KQVTIENCAAVNHQVSGILEVHDPIAGEFILEV----SSPGFDRAFFSDEQMHAYVG 106

Query: 85  GIISLR 68
             +SLR
Sbjct: 107 QTVSLR 112

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>CBS_YEAST (P32582) Cystathionine beta-synthase (EC 4.2.1.22) (Serine|
           sulfhydrase) (Beta-thionase)
          Length = 507

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = -1

Query: 730 YGGADVAGMQRRPLVHVKDSDNLRDVALTIIQNEISSVPIFKSSTDISGIPLLN 569
           +G A V  +  +P+V VK++  + DV   +  N    +P+      +SG+  L+
Sbjct: 364 FGNATVKDLHLKPVVSVKETAKVTDVIKILKDNGFDQLPVLTEDGKLSGLVTLS 417

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>IBP2_RAT (P12843) Insulin-like growth factor-binding protein 2 precursor|
           (IGFBP-2) (IBP-2) (IGF-binding protein 2) (BRL-BP)
          Length = 304

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 28/101 (27%), Positives = 47/101 (46%)
 Frame = -1

Query: 469 IGTWSQHTGRASTRQLRTSRLSAPLITCLDFLLEDRISSIPIVDDNGSLLDVYSLSDIMA 290
           +G  ++H      ++LR      P    LD +LE RIS++ + DD G L  +YSL  I  
Sbjct: 182 MGKGAKHLSLEEPKKLRPPPARTPCQQELDQVLE-RISTMRLPDDRGPLEHLYSL-HIPN 239

Query: 289 LAKNDVYTCIKLEQLTVENALELQYQVNGRRPCHTCLSTST 167
             K+ +Y           N  + +  +NG+R    C++ +T
Sbjct: 240 CDKHGLY-----------NLKQCKMSLNGQRGECWCVNPNT 269

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>COG2_CAEEL (Q21444) Conserved oligomeric Golgi complex component 2 (LDLC|
           protein homolog)
          Length = 681

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 16/70 (22%), Positives = 33/70 (47%)
 Frame = +3

Query: 72  NEIIPCTDLVIGSIATSRRTPGTDN*SNTSSNVLVLKQV*HGLRPFT*YCSSKAFSTVNC 251
           NE++   +    S++  +R   TD+ S  + +  + +Q+ H  + F  Y  +  FS  + 
Sbjct: 591 NEVLDSVEATGSSLSRFKRKTTTDSGSTVTDDDKIKQQIYHDAKYFLSYAENLVFSQADL 650

Query: 252 SSLMQV*TSF 281
           + L +V   F
Sbjct: 651 TGLQEVVNRF 660

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>IMDH_METJA (Q59011) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 496

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 385 LDFLLEDRISSIPIVDDNGSLLDVYSLSDIMALAK 281
           L+ +  +R+  +PIVDD   L+ + +L DI+   K
Sbjct: 173 LELMYANRVERLPIVDDENRLIGIITLRDILKRRK 207


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,897,114
Number of Sequences: 219361
Number of extensions: 2205001
Number of successful extensions: 5405
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5385
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7876239983
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result