ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14h01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1T2R46_MACMU (Q645T4) Taste receptor type 2 member 46 (T2R46) 31 3.3
2FA5_PIG (Q9GLP1) Coagulation factor V precursor (Activated prote... 30 9.7

>T2R46_MACMU (Q645T4) Taste receptor type 2 member 46 (T2R46)|
          Length = 308

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = +3

Query: 474 TFGEL*FLH-KNNTKAILLKTASVQVSSIQIMQIRVQNKGKRVWKSRYDGDLSTPPSLKP 650
           TF  L FLH K   K+++L T    +  + +  + V N    VW+  Y+G+++    L+ 
Sbjct: 112 TFSNLIFLHLKRKVKSVILVTLLGPLLFL-VCHLFVMNMNHIVWRKEYEGNITWRIKLRS 170

Query: 651 CLSSSN-SVDKLREIKTLT 704
            +  SN +V  L  +  LT
Sbjct: 171 AMYLSNVTVTMLANLIPLT 189



to top

>FA5_PIG (Q9GLP1) Coagulation factor V precursor (Activated protein C|
           cofactor) [Contains: Coagulation factor V heavy chain;
           Coagulation factor V light chain]
          Length = 2258

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 465 FTEIISGKYEKYLRKDPPDLRMASLWGP 382
           F +I+  +YE Y +K+ P  RM+ L GP
Sbjct: 61  FKKIVYREYEAYFQKEKPPSRMSGLLGP 88


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,164,795
Number of Sequences: 219361
Number of extensions: 1919401
Number of successful extensions: 4932
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4931
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7366267610
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top