>VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A)|
          Length = 605

 Score = 35.4 bits (80), Expect = 0.26
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -3

Query: 654 DQSNDSCDHKCQ-HHKVPARKKQCVDECHRREHHHPSRAACERKCSHWRDPTRKE 493
           D+    C  +CQ   + P RK+QCV EC  +    P +   E K   WR+   +E
Sbjct: 119 DKQFKECQQRCQWQEQRPERKQQCVKECREQYQEDPWKGERENK---WREEEEEE 170



 Score = 30.8 bits (68), Expect = 6.3
 Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
 Frame = -3

Query: 636 CDHKCQHHKVPAR---KKQCVDECHRREHHHPSRA--ACERKCSHWRD--PTRKERCVQT 478
           C   CQ  +   R   ++ C ++  +++   P +    C+++C  W++  P RK++CV+ 
Sbjct: 87  CRQHCQQEERRLRPHCEQSCREQYEKQQQQQPDKQFKECQQRCQ-WQEQRPERKQQCVKE 145

Query: 477 C 475
           C
Sbjct: 146 C 146

>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system|
           defective) (Homeobox protein NK-2)
          Length = 723

 Score = 34.3 bits (77), Expect = 0.57
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
 Frame = -3

Query: 714 RGRPVTMSSSAPTPKEVEVDDQSNDS--------CDHKC--QHHKVPARKKQCVDECHRR 565
           +G   + S+ +PTP  V  D+  N S         DH    +HH  P+  +Q     H +
Sbjct: 245 QGSHTSPSALSPTPAGVSADEHHNGSGTGGGAGEADHHSTTEHHAPPSHPQQ--QHPHHQ 302

Query: 564 EHHHP 550
           +HHHP
Sbjct: 303 QHHHP 307

>VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B)|
          Length = 588

 Score = 34.3 bits (77), Expect = 0.57
 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
 Frame = -3

Query: 729 RXQPRRGRPVTMSSSAPTPKEVEVDDQSNDSCDHKCQHH-----KVPARKKQCVDECHRR 565
           R Q  R RP          K  E + Q +     +CQ H     + P RK+QCV EC  R
Sbjct: 95  RQQEERQRPQCQQRCL---KRFEQEQQQSQRQFQECQQHCHQQEQRPERKQQCVRECRER 151

Query: 564 EHHHPSRAACERK 526
              +P R   E +
Sbjct: 152 YQENPWRREREEE 164

>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)|
          Length = 1426

 Score = 33.9 bits (76), Expect = 0.75
 Identities = 23/61 (37%), Positives = 28/61 (45%)
 Frame = +3

Query: 495  PSLSGLSNGYTSSRKPPCSGDDAPVCGTRPRTASSSPELYDVGTCGRTSRCSDHRPPPPS 674
            PSL   S G+TSS KPP      P     P T +S   L +V + G         PPPP+
Sbjct: 924  PSLPAPSPGWTSSPKPPLQSPGIPPNHKAPLTMASPAMLGNVESGG---------PPPPT 974

Query: 675  A 677
            A
Sbjct: 975  A 975

>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)|
          Length = 1425

 Score = 33.5 bits (75), Expect = 0.97
 Identities = 23/61 (37%), Positives = 27/61 (44%)
 Frame = +3

Query: 495  PSLSGLSNGYTSSRKPPCSGDDAPVCGTRPRTASSSPELYDVGTCGRTSRCSDHRPPPPS 674
            PSL   S G+TSS KPP      P     P T +S   L  V + G         PPPP+
Sbjct: 923  PSLPAPSPGWTSSPKPPLQSPGIPPNHKAPLTMASPAMLGSVESGG---------PPPPT 973

Query: 675  A 677
            A
Sbjct: 974  A 974

>ROM1_YEAST (P53046) RHO1 GDP-GTP exchange protein 1 (Protein kinase C|
           suppressor SKC1)
          Length = 1155

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -3

Query: 684 APTPKEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAACERKC-SHWRD 508
           +PT K++ ++D +     + C     P++K+  V   H R+H  PS  +  +   SH  D
Sbjct: 112 SPTNKKISINDSTRQDKGNSCTTTSSPSQKRSNVLLPHVRKHSSPSLLSFSKNSGSHMGD 171

Query: 507 PTR 499
           P +
Sbjct: 172 PNQ 174

>LHX8_MOUSE (O35652) LIM/homeobox protein Lhx8 (LIM homeodomain Lhx7) (L3)|
          Length = 367

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +1

Query: 115 SSCGKHT*QTNLLKEGKGTEFHGALF*ERHRQSCCYCKLLVFYSHAFAVIASKTYTRAY 291
           S CG+H   T+ ++  KG  +H A F      +C  CK  +     FA++  K   R +
Sbjct: 158 SRCGRHIHSTDWVRRAKGNVYHLACF------ACFSCKRQLSTGEEFALVEEKVLCRVH 210

>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)|
          Length = 1391

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 13/56 (23%), Positives = 26/56 (46%)
 Frame = -3

Query: 636  CDHKCQHHKVPARKKQCVDECHRREHHHPSRAACERKCSHWRDPTRKERCVQTCMR 469
            C+ + +  K  A KK+C +E  +RE     +  C       ++ T K++C +   +
Sbjct: 1112 CEERAKKEKEAAEKKRC-EEAAKREKEAAEKKKCAEAAKKEKEATEKQKCAEAAKK 1166



 Score = 31.2 bits (69), Expect = 4.8
 Identities = 14/65 (21%), Positives = 28/65 (43%)
 Frame = -3

Query: 663  EVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAACERKCSHWRDPTRKERCV 484
            E +      C+ + +  K  A KKQC +E  ++E     +  CE      ++   K++C 
Sbjct: 1087 EKEAAEKKQCEERAKKLKEAAEKKQC-EERAKKEKEAAEKKRCEEAAKREKEAAEKKKCA 1145

Query: 483  QTCMR 469
            +   +
Sbjct: 1146 EAAKK 1150

>ACH91_ONCMY (Q8JFN7) Neuronal acetylcholine receptor protein, alpha-9-I subunit|
           precursor (Nicotinic acetylcholine receptor subunit
           alpha 9-I) (NACHR alpha 9-I)
          Length = 572

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = -3

Query: 696 MSSSAPTPKEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAACERKCSH 517
           ++   P PKE  ++  S  +C   C HHK      Q +  C R +     RA C  K + 
Sbjct: 487 LNEPLPYPKEKHLNPASAPACSCPCPHHKQVVYNIQYIANCFREQ-----RATC-AKGAE 540

Query: 516 WR 511
           W+
Sbjct: 541 WK 542

>YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragment)|
          Length = 373

 Score = 30.8 bits (68), Expect = 6.3
 Identities = 24/95 (25%), Positives = 35/95 (36%)
 Frame = +3

Query: 525 TSSRKPPCSGDDAPVCGTRPRTASSSPELYDVGTCGRTSRCSDHRPPPPSAWGRSMTSSP 704
           +S++    S DDA    +   T+SSS  L    +   TS  S     P S+   S  SSP
Sbjct: 110 SSAQSSHSSTDDATSTSSTSTTSSSSSSL----SSSSTSSSSKQSSSPQSSTMSSTDSSP 165

Query: 705 XXXXXXXXXXXXXXXXXFLXCRVSSMATLSXRKTP 809
                            F   + SS ++ +   TP
Sbjct: 166 TSSSLSASSTTTSSISSFSFSQSSSSSSTTSSSTP 200

>SIA8B_PANTR (P61643) Alpha-2,8-sialyltransferase 8B (EC 2.4.99.-) (ST8Sia II)|
          Length = 375

 Score = 30.4 bits (67), Expect = 8.2
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -3

Query: 768 GKXETVRAAVHALRXQPRRGRPVTMSSSAPTPKEVEVDDQSNDSCDHKCQ 619
           G   T+R+AV++L  +  R   V   SS+P      V D+SN+S  H  Q
Sbjct: 36  GGRGTIRSAVNSLHSKSNRAEVVINGSSSPA-----VVDRSNESIKHNIQ 80

>SIA8B_HUMAN (Q92186) Alpha-2,8-sialyltransferase 8B (EC 2.4.99.-) (ST8Sia II)|
           (Sialyltransferase X) (STX)
          Length = 375

 Score = 30.4 bits (67), Expect = 8.2
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -3

Query: 768 GKXETVRAAVHALRXQPRRGRPVTMSSSAPTPKEVEVDDQSNDSCDHKCQ 619
           G   T+R+AV++L  +  R   V   SS+P      V D+SN+S  H  Q
Sbjct: 36  GGRGTIRSAVNSLHSKSNRAEVVINGSSSPA-----VVDRSNESIKHNIQ 80

>ADA19_HUMAN (Q9H013) ADAM 19 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 19) (Meltrin beta)
           (Metalloprotease and disintegrin dentritic antigen
           marker) (MADDAM)
          Length = 956

 Score = 30.4 bits (67), Expect = 8.2
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +2

Query: 158 KEKEQSSMELSSRRGIANHAATASYWSFILTPLPS*LARRIRGRIYRSVYTR 313
           +E E SS+ LS+ RGI      +S  S+++ PLP    + +   IYRS + +
Sbjct: 121 RETELSSVTLSTCRGIRGLITVSSNLSYVIEPLPDSKGQHL---IYRSEHLK 169


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,079,771
Number of Sequences: 219361
Number of extensions: 1897488
Number of successful extensions: 5500
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5485
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 10641047660
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)