ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194849.1| Oryza sativa (japonica cultivar-group) putative... 52 0.003
2gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, c... 52 0.003
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.003
4dbj|AK099480.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.003
5dbj|AK059665.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.003
6gb|DQ317534.1| Oryza sativa (japonica cultivar-group) proline-ri... 52 0.003
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.003
8ref|XM_476577.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.041
9gb|AF509871.1| Petunia x hybrida nam-like protein 8 (NH8) mRNA, ... 48 0.041
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.041
11dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.041
12emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 44 0.64
13ref|NM_187496.1| Oryza sativa (japonica cultivar-group), predic... 42 2.5
14ref|XM_471729.1| Oryza sativa (japonica cultivar-group), predic... 42 2.5
15gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 2.5
16gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 2.5
17ref|XM_369919.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 2.5
18gb|AY657531.1| Synthetic construct Peudomonas aeruginosa clone F... 42 2.5
19gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 2.5
20gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.5
22gb|AY180959.1| Drosophila melanogaster companion of reaper prote... 42 2.5
23gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 2.5
24emb|BX649209.1| Mycobacterium ulcerans plasmid pMUM001, complete... 42 2.5
25emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 2.5
26emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4,... 42 2.5
27gb|AC104609.10| Drosophila melanogaster X BAC RP98-39F18 (Roswel... 42 2.5
28ref|NM_132240.2| Drosophila melanogaster Companion of reaper CG1... 42 2.5
29gb|AF022020.1|AF022020 Lycopersicon esculentum auxin-regulated I... 42 2.5
30gb|AY060803.1| Drosophila melanogaster GH26991 full length cDNA 42 2.5
31gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
32gb|AF220816.1|AF220816 Brenneria nigrifluens strain En29277 majo... 42 2.5
33gb|AF220815.1|AF220815 Brenneria nigrifluens strain En29275 majo... 42 2.5
34gb|AF220814.1|AF220814 Brenneria nigrifluens strain En13028 majo... 42 2.5
35gb|AF220813.1|AF220813 Brenneria nigrifluens strain En1391 major... 42 2.5
36gb|AF220812.1|AF220812 Brenneria nigrifluens strain En1575 major... 42 2.5
37dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
39dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
40gb|AE004820.1| Pseudomonas aeruginosa PAO1, section 381 of 529 o... 42 2.5
41dbj|AK105689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.5
42dbj|AK101153.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.5
43dbj|AK068128.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.5
44gb|AC104928.8| Mus musculus chromosome 8, clone RP24-111K8, comp... 42 2.5
45gb|AE003443.2| Drosophila melanogaster chromosome X, section 27 ... 42 2.5 
>ref|NM_194849.1| Oryza sativa (japonica cultivar-group) putative proline-rich
           protein (OSJNBb0016M10.7), mRNA
          Length = 816

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 165 cttgaagaatgggttcttcttgatgaacggcaggagcttcttgaagagct 214
           ||||| |||||| ||||||||||| || ||||| ||||||||||| ||||
Sbjct: 774 cttgaggaatggattcttcttgatcaatggcagcagcttcttgaacagct 725
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>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence
          Length = 118101

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 165   cttgaagaatgggttcttcttgatgaacggcaggagcttcttgaagagct 214
             ||||| |||||| ||||||||||| || ||||| ||||||||||| ||||
Sbjct: 57981 cttgaggaatggattcttcttgatcaatggcagcagcttcttgaacagct 58030
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                 
Query: 165     cttgaagaatgggttcttcttgatgaacggcaggagcttcttgaagagct 214
               ||||| |||||| ||||||||||| || ||||| ||||||||||| ||||
Sbjct: 2876949 cttgaggaatggattcttcttgatcaatggcagcagcttcttgaacagct 2876998
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>dbj|AK099480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025G01, full
           insert sequence
          Length = 1083

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 165 cttgaagaatgggttcttcttgatgaacggcaggagcttcttgaagagct 214
           ||||| |||||| ||||||||||| || ||||| ||||||||||| ||||
Sbjct: 831 cttgaggaatggattcttcttgatcaatggcagcagcttcttgaacagct 782
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>dbj|AK059665.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E08, full
           insert sequence
          Length = 1069

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 165 cttgaagaatgggttcttcttgatgaacggcaggagcttcttgaagagct 214
           ||||| |||||| ||||||||||| || ||||| ||||||||||| ||||
Sbjct: 816 cttgaggaatggattcttcttgatcaatggcagcagcttcttgaacagct 767
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>gb|DQ317534.1| Oryza sativa (japonica cultivar-group) proline-rich protein mRNA,
           complete cds
          Length = 1061

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 165 cttgaagaatgggttcttcttgatgaacggcaggagcttcttgaagagct 214
           ||||| |||||| ||||||||||| || ||||| ||||||||||| ||||
Sbjct: 825 cttgaggaatggattcttcttgatcaatggcagcagcttcttgaacagct 776
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                 
Query: 165     cttgaagaatgggttcttcttgatgaacggcaggagcttcttgaagagct 214
               ||||| |||||| ||||||||||| || ||||| ||||||||||| ||||
Sbjct: 2876900 cttgaggaatggattcttcttgatcaatggcagcagcttcttgaacagct 2876949
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>ref|XM_476577.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 666

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 345 cggcggcttgtgctccggcacggg 368
           ||||||||||||||||||||||||
Sbjct: 498 cggcggcttgtgctccggcacggg 521



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 297 cggcggcttgtgctccggcacggg 320
           ||||||||||||||||||||||||
Sbjct: 498 cggcggcttgtgctccggcacggg 521
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>gb|AF509871.1| Petunia x hybrida nam-like protein 8 (NH8) mRNA, complete cds
          Length = 1482

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 611 actccggcaccggcaccggcgccg 634
           ||||||||||||||||||||||||
Sbjct: 94  actccggcaccggcaccggcgccg 117
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 297     cggcggcttgtgctccggcacggg 320
               ||||||||||||||||||||||||
Sbjct: 2022768 cggcggcttgtgctccggcacggg 2022791



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 345     cggcggcttgtgctccggcacggg 368
               ||||||||||||||||||||||||
Sbjct: 2022768 cggcggcttgtgctccggcacggg 2022791
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>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0495H05
          Length = 205595

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 345    cggcggcttgtgctccggcacggg 368
              ||||||||||||||||||||||||
Sbjct: 107065 cggcggcttgtgctccggcacggg 107088



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 297    cggcggcttgtgctccggcacggg 320
              ||||||||||||||||||||||||
Sbjct: 107065 cggcggcttgtgctccggcacggg 107088
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>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 614    ccggcaccggcaccggcgccgg 635
              ||||||||||||||||||||||
Sbjct: 139621 ccggcaccggcaccggcgccgg 139642
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>ref|NM_187496.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1830

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 614 ccggcaccggcaccggcgccg 634
           |||||||||||||||||||||
Sbjct: 50  ccggcaccggcaccggcgccg 30
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>ref|XM_471729.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1485

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 614 ccggcaccggcaccggcgccg 634
           |||||||||||||||||||||
Sbjct: 782 ccggcaccggcaccggcgccg 802
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 176     ggttcttcttgatgaacggca 196
               |||||||||||||||||||||
Sbjct: 5626799 ggttcttcttgatgaacggca 5626779
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 616    ggcaccggcaccggcgccggt 636
              |||||||||||||||||||||
Sbjct: 462637 ggcaccggcaccggcgccggt 462657
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>ref|XM_369919.1| Magnaporthe grisea 70-15 hypothetical protein (MG06434.4) partial
            mRNA
          Length = 5571

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 610  tactccggcaccggcaccggc 630
            |||||||||||||||||||||
Sbjct: 5388 tactccggcaccggcaccggc 5408
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>gb|AY657531.1| Synthetic construct Peudomonas aeruginosa clone FLH040769.01F
           PA4029 gene, partial cds
          Length = 666

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 176 ggttcttcttgatgaacggca 196
           |||||||||||||||||||||
Sbjct: 550 ggttcttcttgatgaacggca 530
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 616     ggcaccggcaccggcgccggt 636
               |||||||||||||||||||||
Sbjct: 3308584 ggcaccggcaccggcgccggt 3308604
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>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07,
             complete sequence
          Length = 159932

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 614   ccggcaccggcaccggcgccg 634
             |||||||||||||||||||||
Sbjct: 50305 ccggcaccggcaccggcgccg 50325
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 614     ccggcaccggcaccggcgccg 634
               |||||||||||||||||||||
Sbjct: 8984070 ccggcaccggcaccggcgccg 8984050
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>gb|AY180959.1| Drosophila melanogaster companion of reaper protein (Corp) mRNA,
           complete cds
          Length = 1077

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 603 cggcttgtactccggcaccgg 623
           |||||||||||||||||||||
Sbjct: 518 cggcttgtactccggcaccgg 498
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 612     ctccggcaccggcaccggcgccggt 636
               ||||||||||||||||||| |||||
Sbjct: 2826495 ctccggcaccggcaccggcaccggt 2826519



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 615    cggcaccggcaccggcgccgg 635
              |||||||||||||||||||||
Sbjct: 172191 cggcaccggcaccggcgccgg 172211
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>emb|BX649209.1| Mycobacterium ulcerans plasmid pMUM001, complete plasmid genome
          Length = 174155

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 614  ccggcaccggcaccggcgccg 634
            |||||||||||||||||||||
Sbjct: 6802 ccggcaccggcaccggcgccg 6782
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 616     ggcaccggcaccggcgccggt 636
               |||||||||||||||||||||
Sbjct: 3039868 ggcaccggcaccggcgccggt 3039888
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>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03,
             complete sequence
          Length = 175555

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 614   ccggcaccggcaccggcgccg 634
             |||||||||||||||||||||
Sbjct: 38446 ccggcaccggcaccggcgccg 38466
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>gb|AC104609.10| Drosophila melanogaster X BAC RP98-39F18 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 165014

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 603    cggcttgtactccggcaccgg 623
              |||||||||||||||||||||
Sbjct: 160300 cggcttgtactccggcaccgg 160320
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>ref|NM_132240.2| Drosophila melanogaster Companion of reaper CG10965-RA (Corp), mRNA
          Length = 1079

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 603 cggcttgtactccggcaccgg 623
           |||||||||||||||||||||
Sbjct: 520 cggcttgtactccggcaccgg 500
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>gb|AF022020.1|AF022020 Lycopersicon esculentum auxin-regulated IAA9 (IAA9) mRNA, partial
           cds
          Length = 298

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 612 ctccggcaccggcaccggcgc 632
           |||||||||||||||||||||
Sbjct: 64  ctccggcaccggcaccggcgc 84
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>gb|AY060803.1| Drosophila melanogaster GH26991 full length cDNA
          Length = 1069

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 603 cggcttgtactccggcaccgg 623
           |||||||||||||||||||||
Sbjct: 492 cggcttgtactccggcaccgg 472
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>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09,
              complete sequence
          Length = 143595

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 614    ccggcaccggcaccggcgccg 634
              |||||||||||||||||||||
Sbjct: 108931 ccggcaccggcaccggcgccg 108911
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>gb|AF220816.1|AF220816 Brenneria nigrifluens strain En29277 major outer membrane protein
           (ompA) gene, partial cds
          Length = 435

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 612 ctccggcaccggcaccggcgccggt 636
           ||||||||||||| |||||||||||
Sbjct: 269 ctccggcaccggctccggcgccggt 293
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>gb|AF220815.1|AF220815 Brenneria nigrifluens strain En29275 major outer membrane protein
           (ompA) gene, partial cds
          Length = 435

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 612 ctccggcaccggcaccggcgccggt 636
           ||||||||||||| |||||||||||
Sbjct: 269 ctccggcaccggctccggcgccggt 293
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>gb|AF220814.1|AF220814 Brenneria nigrifluens strain En13028 major outer membrane protein
           (ompA) gene, partial cds
          Length = 435

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 612 ctccggcaccggcaccggcgccggt 636
           ||||||||||||| |||||||||||
Sbjct: 269 ctccggcaccggctccggcgccggt 293
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>gb|AF220813.1|AF220813 Brenneria nigrifluens strain En1391 major outer membrane protein
           (ompA) gene, partial cds
          Length = 435

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 612 ctccggcaccggcaccggcgccggt 636
           ||||||||||||| |||||||||||
Sbjct: 269 ctccggcaccggctccggcgccggt 293
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>gb|AF220812.1|AF220812 Brenneria nigrifluens strain En1575 major outer membrane protein
           (ompA) gene, partial cds
          Length = 435

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 612 ctccggcaccggcaccggcgccggt 636
           ||||||||||||| |||||||||||
Sbjct: 269 ctccggcaccggctccggcgccggt 293
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 614      ccggcaccggcaccggcgccg 634
                |||||||||||||||||||||
Sbjct: 13824787 ccggcaccggcaccggcgccg 13824807
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 614      ccggcaccggcaccggcgccg 634
                |||||||||||||||||||||
Sbjct: 17520500 ccggcaccggcaccggcgccg 17520520
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 614     ccggcaccggcaccggcgccg 634
               |||||||||||||||||||||
Sbjct: 8981905 ccggcaccggcaccggcgccg 8981885
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>gb|AE004820.1| Pseudomonas aeruginosa PAO1, section 381 of 529 of the complete
            genome
          Length = 13445

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 176  ggttcttcttgatgaacggca 196
            |||||||||||||||||||||
Sbjct: 1067 ggttcttcttgatgaacggca 1047
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>dbj|AK105689.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C02, full
           insert sequence
          Length = 1704

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 614 ccggcaccggcaccggcgccg 634
           |||||||||||||||||||||
Sbjct: 946 ccggcaccggcaccggcgccg 966
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>dbj|AK101153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027D03, full
           insert sequence
          Length = 2082

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 614 ccggcaccggcaccggcgccg 634
           |||||||||||||||||||||
Sbjct: 170 ccggcaccggcaccggcgccg 150
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>dbj|AK068128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C23, full
           insert sequence
          Length = 1708

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 614 ccggcaccggcaccggcgccg 634
           |||||||||||||||||||||
Sbjct: 851 ccggcaccggcaccggcgccg 871
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>gb|AC104928.8| Mus musculus chromosome 8, clone RP24-111K8, complete sequence
          Length = 177873

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 152    caggggggaaattcttgaaga 172
              |||||||||||||||||||||
Sbjct: 133918 caggggggaaattcttgaaga 133898
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>gb|AE003443.2| Drosophila melanogaster chromosome X, section 27 of 74 of the complete
              sequence
          Length = 299153

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 603    cggcttgtactccggcaccgg 623
              |||||||||||||||||||||
Sbjct: 154405 cggcttgtactccggcaccgg 154425


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,659,320
Number of Sequences: 3902068
Number of extensions: 5659320
Number of successful extensions: 93667
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92644
Number of HSP's gapped (non-prelim): 1020
length of query: 733
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 710
effective length of database: 17,143,297,704
effective search space: 12171741369840
effective search space used: 12171741369840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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