| Clone Name | rbags14f23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009009.1| Triticum aestivum clone wdk3c.pk005.b17:fis, full insert mRNA sequence Length = 1620 Score = 335 bits (169), Expect = 4e-89 Identities = 213/230 (92%) Strand = Plus / Minus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 1254 gcatgtatggcatctgcaagatggggtacagttctggagctcaaaccggccatgctgatc 1195 Query: 73 ctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgacttgatcactg 132 |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 1194 ctcccatcagatgtcatgtaaatgtgatattcttgcctcatgaaggctacttgatcactg 1135 Query: 133 ttgagcccagngaaagtaaacatcccaatttgcttantgatgtgggaccaatctccangn 192 |||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| | Sbjct: 1134 ttgagcccagtgaaagtaaacatcccaatctgcttaatgatgtgggaccaatctccaggt 1075 Query: 193 gtttctntgactntcagtgcatcaaaaagctgctccctcatgctaattat 242 ||||| ||| | |||| |||| ||||||||||||||||||||||||||| Sbjct: 1074 gtttccctgattttcagcgcattaaaaagctgctccctcatgctaattat 1025
>emb|X63429.1|PMAAT2 P.miliaceum mRNA for aspartate aminotransferase (pcAAT2) Length = 1514 Score = 210 bits (106), Expect = 1e-51 Identities = 204/239 (85%) Strand = Plus / Minus Query: 4 gtaaccgcagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgcc 63 ||||| ||||| ||||||||||||||||||||||| ||| || | | ||||||| ||| Sbjct: 1263 gtaactgcagcgtgtatggcatctgcaagatggggcacattcttcatgttcaaaccagcc 1204 Query: 64 atgctgatcctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgact 123 || ||||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||| Sbjct: 1203 atactgatcctcccgtcggatgtcatgtaaatgtggtattcttgcctcatgaaggccact 1144 Query: 124 tgatcactgttgagcccagngaaagtaaacatcccaatttgcttantgatgtgggaccaa 183 || || || |||||||||| |||||||||||| |||||||||||| |||||||| |||| Sbjct: 1143 tgctcgctattgagcccagtgaaagtaaacataccaatttgcttaatgatgtggctccaa 1084 Query: 184 tctccangngtttctntgactntcagtgcatcaaaaagctgctccctcatgctaattat 242 |||||| | ||| || || | | || |||||||| ||||| | ||||||||||||||| Sbjct: 1083 tctccaggagttcctctggattttagcgcatcaaatagctgttgcctcatgctaattat 1025
>gb|BT016540.1| Zea mays clone Contig373 mRNA sequence Length = 1698 Score = 208 bits (105), Expect = 6e-51 Identities = 153/170 (90%) Strand = Plus / Minus Query: 4 gtaaccgcagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgcc 63 ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||| ||| Sbjct: 1413 gtaactgcagcgtgtatggcatctgcaagatggggcacagtcctcatgctcaaaccggcc 1354 Query: 64 atgctgatcctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgact 123 ||||||||||||||||| |||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 1353 atgctgatcctcccatcagatgtcatataaatgtggtattcctgcctcatgaatgcgact 1294 Query: 124 tgatcactgttgagcccagngaaagtaaacatcccaatttgcttantgat 173 || || || || ||||||| ||||||||||||||||||||||||| |||| Sbjct: 1293 tgttcgctattcagcccagtgaaagtaaacatcccaatttgcttaatgat 1244
>gb|BT016854.1| Zea mays clone Contig687 mRNA sequence Length = 1481 Score = 208 bits (105), Expect = 6e-51 Identities = 153/170 (90%) Strand = Plus / Plus Query: 4 gtaaccgcagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgcc 63 ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||| ||| Sbjct: 646 gtaactgcagcgtgtatggcatctgcaagatggggcacagtcctcatgctcaaaccggcc 705 Query: 64 atgctgatcctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgact 123 ||||||||||||||||| |||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 706 atgctgatcctcccatcagatgtcatataaatgtggtattcctgcctcatgaatgcgact 765 Query: 124 tgatcactgttgagcccagngaaagtaaacatcccaatttgcttantgat 173 || || || || ||||||| ||||||||||||||||||||||||| |||| Sbjct: 766 tgttcgctattcagcccagtgaaagtaaacatcccaatttgcttaatgat 815
>gb|AY103658.1| Zea mays PCO118382 mRNA sequence Length = 1690 Score = 208 bits (105), Expect = 6e-51 Identities = 153/170 (90%) Strand = Plus / Minus Query: 4 gtaaccgcagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgcc 63 ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||| ||| Sbjct: 1438 gtaactgcagcgtgtatggcatctgcaagatggggcacagtcctcatgctcaaaccggcc 1379 Query: 64 atgctgatcctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgact 123 ||||||||||||||||| |||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 1378 atgctgatcctcccatcagatgtcatataaatgtggtattcctgcctcatgaatgcgact 1319 Query: 124 tgatcactgttgagcccagngaaagtaaacatcccaatttgcttantgat 173 || || || || ||||||| ||||||||||||||||||||||||| |||| Sbjct: 1318 tgttcgctattcagcccagtgaaagtaaacatcccaatttgcttaatgat 1269
>ref|XM_463436.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 Score = 186 bits (94), Expect = 2e-44 Identities = 192/227 (84%) Strand = Plus / Minus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 ||||| || |||||||||||||| || | ||||| ||||||||| ||||| |||||| Sbjct: 1202 gcatggattgcatctgcaagatgcggaatggtcctcccgctcaaaccagccatactgatc 1143 Query: 73 ctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgacttgatcactg 132 |||||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 1142 ctcccatcagatgtcatgtaaatgtggtattcctgcctcatgaaagccacttgatcactg 1083 Query: 133 ttgagcccagngaaagtaaacatcccaatttgcttantgatgtgggaccaatctccangn 192 |||||||||| |||||| ||||| || || |||||| ||||||| ||| |||||| | Sbjct: 1082 ttgagcccagtgaaagtgaacattccgatctgcttaatgatgtgactccagtctccagga 1023 Query: 193 gtttctntgactntcagtgcatcaaaaagctgctccctcatgctaat 239 |||||| | | |||| |||||||||||||| | |||||||||||| Sbjct: 1022 gtttctctcgttttcagagcatcaaaaagctgttgcctcatgctaat 976
>dbj|AB110193.1| Oryza sativa (japonica cultivar-group) mRNA for aspartate aminotransferase, complete cds, clone: 22C4AG009 Length = 1502 Score = 186 bits (94), Expect = 2e-44 Identities = 192/227 (84%) Strand = Plus / Minus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 ||||| || |||||||||||||| || | ||||| ||||||||| ||||| |||||| Sbjct: 1258 gcatggattgcatctgcaagatgcggaatggtcctcccgctcaaaccagccatactgatc 1199 Query: 73 ctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgacttgatcactg 132 |||||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 1198 ctcccatcagatgtcatgtaaatgtggtattcctgcctcatgaaagccacttgatcactg 1139 Query: 133 ttgagcccagngaaagtaaacatcccaatttgcttantgatgtgggaccaatctccangn 192 |||||||||| |||||| ||||| || || |||||| ||||||| ||| |||||| | Sbjct: 1138 ttgagcccagtgaaagtgaacattccgatctgcttaatgatgtgactccagtctccagga 1079 Query: 193 gtttctntgactntcagtgcatcaaaaagctgctccctcatgctaat 239 |||||| | | |||| |||||||||||||| | |||||||||||| Sbjct: 1078 gtttctctcgttttcagagcatcaaaaagctgttgcctcatgctaat 1032
>dbj|D14673.1|RICAAT Oryza sativa (japonica cultivar-group) mRNA for aspartate aminotransferase, complete cds Length = 1514 Score = 186 bits (94), Expect = 2e-44 Identities = 192/227 (84%) Strand = Plus / Minus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 ||||| || |||||||||||||| || | ||||| ||||||||| ||||| |||||| Sbjct: 1270 gcatggattgcatctgcaagatgcggaatggtcctcccgctcaaaccagccatactgatc 1211 Query: 73 ctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgacttgatcactg 132 |||||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 1210 ctcccatcagatgtcatgtaaatgtggtattcctgcctcatgaaagccacttgatcactg 1151 Query: 133 ttgagcccagngaaagtaaacatcccaatttgcttantgatgtgggaccaatctccangn 192 |||||||||| |||||| ||||| || || |||||| ||||||| ||| |||||| | Sbjct: 1150 ttgagcccagtgaaagtgaacattccgatctgcttaatgatgtgactccagtctccagga 1091 Query: 193 gtttctntgactntcagtgcatcaaaaagctgctccctcatgctaat 239 |||||| | | |||| |||||||||||||| | |||||||||||| Sbjct: 1090 gtttctctcgttttcagagcatcaaaaagctgttgcctcatgctaat 1044
>dbj|AK104829.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H04, full insert sequence Length = 1519 Score = 186 bits (94), Expect = 2e-44 Identities = 192/227 (84%) Strand = Plus / Minus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 ||||| || |||||||||||||| || | ||||| ||||||||| ||||| |||||| Sbjct: 1275 gcatggattgcatctgcaagatgcggaatggtcctcccgctcaaaccagccatactgatc 1216 Query: 73 ctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgacttgatcactg 132 |||||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 1215 ctcccatcagatgtcatgtaaatgtggtattcctgcctcatgaaagccacttgatcactg 1156 Query: 133 ttgagcccagngaaagtaaacatcccaatttgcttantgatgtgggaccaatctccangn 192 |||||||||| |||||| ||||| || || |||||| ||||||| ||| |||||| | Sbjct: 1155 ttgagcccagtgaaagtgaacattccgatctgcttaatgatgtgactccagtctccagga 1096 Query: 193 gtttctntgactntcagtgcatcaaaaagctgctccctcatgctaat 239 |||||| | | |||| |||||||||||||| | |||||||||||| Sbjct: 1095 gtttctctcgttttcagagcatcaaaaagctgttgcctcatgctaat 1049
>dbj|AK103586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B14, full insert sequence Length = 1888 Score = 186 bits (94), Expect = 2e-44 Identities = 192/227 (84%) Strand = Plus / Minus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 ||||| || |||||||||||||| || | ||||| ||||||||| ||||| |||||| Sbjct: 1644 gcatggattgcatctgcaagatgcggaatggtcctcccgctcaaaccagccatactgatc 1585 Query: 73 ctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgacttgatcactg 132 |||||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 1584 ctcccatcagatgtcatgtaaatgtggtattcctgcctcatgaaagccacttgatcactg 1525 Query: 133 ttgagcccagngaaagtaaacatcccaatttgcttantgatgtgggaccaatctccangn 192 |||||||||| |||||| ||||| || || |||||| ||||||| ||| |||||| | Sbjct: 1524 ttgagcccagtgaaagtgaacattccgatctgcttaatgatgtgactccagtctccagga 1465 Query: 193 gtttctntgactntcagtgcatcaaaaagctgctccctcatgctaat 239 |||||| | | |||| |||||||||||||| | |||||||||||| Sbjct: 1464 gtttctctcgttttcagagcatcaaaaagctgttgcctcatgctaat 1418
>dbj|AK103133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120D06, full insert sequence Length = 1525 Score = 186 bits (94), Expect = 2e-44 Identities = 192/227 (84%) Strand = Plus / Minus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 ||||| || |||||||||||||| || | ||||| ||||||||| ||||| |||||| Sbjct: 1281 gcatggattgcatctgcaagatgcggaatggtcctcccgctcaaaccagccatactgatc 1222 Query: 73 ctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgacttgatcactg 132 |||||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 1221 ctcccatcagatgtcatgtaaatgtggtattcctgcctcatgaaagccacttgatcactg 1162 Query: 133 ttgagcccagngaaagtaaacatcccaatttgcttantgatgtgggaccaatctccangn 192 |||||||||| |||||| ||||| || || |||||| ||||||| ||| |||||| | Sbjct: 1161 ttgagcccagtgaaagtgaacattccgatctgcttaatgatgtgactccagtctccagga 1102 Query: 193 gtttctntgactntcagtgcatcaaaaagctgctccctcatgctaat 239 |||||| | | |||| |||||||||||||| | |||||||||||| Sbjct: 1101 gtttctctcgttttcagagcatcaaaaagctgttgcctcatgctaat 1055
>dbj|AK099338.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026J06, full insert sequence Length = 1626 Score = 186 bits (94), Expect = 2e-44 Identities = 192/227 (84%) Strand = Plus / Minus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 ||||| || |||||||||||||| || | ||||| ||||||||| ||||| |||||| Sbjct: 1382 gcatggattgcatctgcaagatgcggaatggtcctcccgctcaaaccagccatactgatc 1323 Query: 73 ctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgacttgatcactg 132 |||||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 1322 ctcccatcagatgtcatgtaaatgtggtattcctgcctcatgaaagccacttgatcactg 1263 Query: 133 ttgagcccagngaaagtaaacatcccaatttgcttantgatgtgggaccaatctccangn 192 |||||||||| |||||| ||||| || || |||||| ||||||| ||| |||||| | Sbjct: 1262 ttgagcccagtgaaagtgaacattccgatctgcttaatgatgtgactccagtctccagga 1203 Query: 193 gtttctntgactntcagtgcatcaaaaagctgctccctcatgctaat 239 |||||| | | |||| |||||||||||||| | |||||||||||| Sbjct: 1202 gtttctctcgttttcagagcatcaaaaagctgttgcctcatgctaat 1156
>dbj|AK067557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112H20, full insert sequence Length = 1668 Score = 178 bits (90), Expect = 5e-42 Identities = 191/227 (84%) Strand = Plus / Minus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 ||||| || |||||||||||||| || | ||||| ||||||||| ||||| |||||| Sbjct: 1424 gcatggattgcatctgcaagatgcggaatggtcctcccgctcaaaccagccatactgatc 1365 Query: 73 ctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgacttgatcactg 132 |||||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 1364 ctcccatcagatgtcatgtaaatgtggtattcctgcctcatgaaagccacttgatcactg 1305 Query: 133 ttgagcccagngaaagtaaacatcccaatttgcttantgatgtgggaccaatctccangn 192 |||||||||| |||||| ||||| || || |||||| ||||||| ||| |||||| | Sbjct: 1304 ttgagcccagtgaaagtgaacattccgatctgcttaatgatgtgactccagtctccagga 1245 Query: 193 gtttctntgactntcagtgcatcaaaaagctgctccctcatgctaat 239 |||||| | | |||| |||||||||||||| | ||||||||||| Sbjct: 1244 gtttctctcgttttcagagcatcaaaaagctgttgactcatgctaat 1198
>dbj|D25322.1|PNIAATA Panicum miliaceum gene for cytosolic aspartate aminotransferase, complete cds Length = 7822 Score = 137 bits (69), Expect = 2e-29 Identities = 100/111 (90%) Strand = Plus / Minus Query: 79 tcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgacttgatcactgttgagc 138 |||||||||||||||||||| ||||| |||||||||||||| ||||| || || |||||| Sbjct: 6174 tcggatgtcatgtaaatgtggtattcttgcctcatgaaggccacttgctcgctattgagc 6115 Query: 139 ccagngaaagtaaacatcccaatttgcttantgatgtgggaccaatctcca 189 |||| |||||||||||| |||||||||||| |||||||| |||||||||| Sbjct: 6114 ccagtgaaagtaaacataccaatttgcttaatgatgtggctccaatctcca 6064 Score = 60.0 bits (30), Expect = 3e-06 Identities = 62/73 (84%) Strand = Plus / Minus Query: 4 gtaaccgcagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgcc 63 ||||| ||||| ||||||||||||||||||||||| ||| || | | ||||||| ||| Sbjct: 6569 gtaactgcagcgtgtatggcatctgcaagatggggcacattcttcatgttcaaaccagcc 6510 Query: 64 atgctgatcctcc 76 || |||||||||| Sbjct: 6509 atactgatcctcc 6497 Score = 40.1 bits (20), Expect = 3.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 211 gcatcaaaaagctgctccctcatgctaattat 242 |||||||| ||||| | ||||||||||||||| Sbjct: 5517 gcatcaaatagctgttgcctcatgctaattat 5486
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 127 bits (64), Expect = 2e-26 Identities = 92/102 (90%) Strand = Plus / Plus Query: 75 cccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgacttgatcactgtt 134 |||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 31992631 cccatcagatgtcatgtaaatgtggtattcctgcctcatgaaagccacttgatcactgtt 31992690 Query: 135 gagcccagngaaagtaaacatcccaatttgcttantgatgtg 176 |||||||| |||||| ||||| || || |||||| ||||||| Sbjct: 31992691 gagcccagtgaaagtgaacattccgatctgcttaatgatgtg 31992732 Score = 65.9 bits (33), Expect = 5e-08 Identities = 59/68 (86%) Strand = Plus / Plus Query: 101 attcctgcctcatgaaggcgacttgatcactgttgagcccagngaaagtaaacatcccaa 160 |||||||||||||| ||| |||||||||| |||| |||| |||||||||||| |||| Sbjct: 31983812 attcctgcctcatggaggtcgtttgatcactgctgagtccagtgaaagtaaacattccaa 31983871 Query: 161 tttgctta 168 |||||||| Sbjct: 31983872 tttgctta 31983879 Score = 44.1 bits (22), Expect = 0.20 Identities = 31/34 (91%) Strand = Plus / Plus Query: 206 tcagtgcatcaaaaagctgctccctcatgctaat 239 |||| |||||||||||||| | |||||||||||| Sbjct: 31993380 tcagagcatcaaaaagctgttgcctcatgctaat 31993413 Score = 42.1 bits (21), Expect = 0.79 Identities = 53/64 (82%) Strand = Plus / Plus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 ||||| || |||||||||||||| || | ||||| ||||||||| ||||| |||||| Sbjct: 31992379 gcatggattgcatctgcaagatgcggaatggtcctcccgctcaaaccagccatactgatc 31992438 Query: 73 ctcc 76 |||| Sbjct: 31992439 ctcc 31992442
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 127 bits (64), Expect = 2e-26 Identities = 92/102 (90%) Strand = Plus / Plus Query: 75 cccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgacttgatcactgtt 134 |||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 34445 cccatcagatgtcatgtaaatgtggtattcctgcctcatgaaagccacttgatcactgtt 34504 Query: 135 gagcccagngaaagtaaacatcccaatttgcttantgatgtg 176 |||||||| |||||| ||||| || || |||||| ||||||| Sbjct: 34505 gagcccagtgaaagtgaacattccgatctgcttaatgatgtg 34546 Score = 65.9 bits (33), Expect = 5e-08 Identities = 59/68 (86%) Strand = Plus / Plus Query: 101 attcctgcctcatgaaggcgacttgatcactgttgagcccagngaaagtaaacatcccaa 160 |||||||||||||| ||| |||||||||| |||| |||| |||||||||||| |||| Sbjct: 25626 attcctgcctcatggaggtcgtttgatcactgctgagtccagtgaaagtaaacattccaa 25685 Query: 161 tttgctta 168 |||||||| Sbjct: 25686 tttgctta 25693 Score = 44.1 bits (22), Expect = 0.20 Identities = 31/34 (91%) Strand = Plus / Plus Query: 206 tcagtgcatcaaaaagctgctccctcatgctaat 239 |||| |||||||||||||| | |||||||||||| Sbjct: 35194 tcagagcatcaaaaagctgttgcctcatgctaat 35227 Score = 42.1 bits (21), Expect = 0.79 Identities = 53/64 (82%) Strand = Plus / Plus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 ||||| || |||||||||||||| || | ||||| ||||||||| ||||| |||||| Sbjct: 34193 gcatggattgcatctgcaagatgcggaatggtcctcccgctcaaaccagccatactgatc 34252 Query: 73 ctcc 76 |||| Sbjct: 34253 ctcc 34256
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 127 bits (64), Expect = 2e-26 Identities = 92/102 (90%) Strand = Plus / Plus Query: 75 cccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgacttgatcactgtt 134 |||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 89358 cccatcagatgtcatgtaaatgtggtattcctgcctcatgaaagccacttgatcactgtt 89417 Query: 135 gagcccagngaaagtaaacatcccaatttgcttantgatgtg 176 |||||||| |||||| ||||| || || |||||| ||||||| Sbjct: 89418 gagcccagtgaaagtgaacattccgatctgcttaatgatgtg 89459 Score = 65.9 bits (33), Expect = 5e-08 Identities = 59/68 (86%) Strand = Plus / Plus Query: 101 attcctgcctcatgaaggcgacttgatcactgttgagcccagngaaagtaaacatcccaa 160 |||||||||||||| ||| |||||||||| |||| |||| |||||||||||| |||| Sbjct: 80539 attcctgcctcatggaggtcgtttgatcactgctgagtccagtgaaagtaaacattccaa 80598 Query: 161 tttgctta 168 |||||||| Sbjct: 80599 tttgctta 80606 Score = 44.1 bits (22), Expect = 0.20 Identities = 31/34 (91%) Strand = Plus / Plus Query: 206 tcagtgcatcaaaaagctgctccctcatgctaat 239 |||| |||||||||||||| | |||||||||||| Sbjct: 90107 tcagagcatcaaaaagctgttgcctcatgctaat 90140 Score = 42.1 bits (21), Expect = 0.79 Identities = 53/64 (82%) Strand = Plus / Plus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 ||||| || |||||||||||||| || | ||||| ||||||||| ||||| |||||| Sbjct: 89106 gcatggattgcatctgcaagatgcggaatggtcctcccgctcaaaccagccatactgatc 89165 Query: 73 ctcc 76 |||| Sbjct: 89166 ctcc 89169
>gb|AF470320.1| Musa acuminata aspartate aminotransferase 2 mRNA, partial cds Length = 574 Score = 91.7 bits (46), Expect = 1e-15 Identities = 134/164 (81%) Strand = Plus / Minus Query: 4 gtaaccgcagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgcc 63 ||||| |||||||| |||||||| ||||||| || || || | ||||||||||| ||| Sbjct: 332 gtaactgcagcatgaatggcatcaacaagatgaggaactgtttttgagctcaaaccggcc 273 Query: 64 atgctgatcctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgact 123 ||||||||||||||||| || ||||||||||| ||||| || | ||||||||| ||| Sbjct: 272 atgctgatcctcccatcagaggtcatgtaaatatgatactctttggtcatgaaggtcact 213 Query: 124 tgatcactgttgagcccagngaaagtaaacatcccaatttgctt 167 || || | || ||||| | |||||||||||| ||||| ||||| Sbjct: 212 tgctcggtattaagccctgtgaaagtaaacattccaatctgctt 169
>gb|AF470319.1| Musa acuminata aspartate aminotransferase 1 mRNA, partial cds Length = 606 Score = 91.7 bits (46), Expect = 1e-15 Identities = 134/164 (81%) Strand = Plus / Minus Query: 4 gtaaccgcagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgcc 63 ||||| |||||||| |||||||| ||||||| || || || | ||||||||||| ||| Sbjct: 332 gtaactgcagcatgaatggcatcaacaagatgaggaactgtttttgagctcaaaccggcc 273 Query: 64 atgctgatcctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgact 123 ||||||||||||||||| || ||||||||||| ||||| || | ||||||||| ||| Sbjct: 272 atgctgatcctcccatcagaggtcatgtaaatatgatactctttggtcatgaaggtcact 213 Query: 124 tgatcactgttgagcccagngaaagtaaacatcccaatttgctt 167 || || | || ||||| | |||||||||||| ||||| ||||| Sbjct: 212 tgctcggtattaagccctgtgaaagtaaacattccaatctgctt 169
>gb|M92660.1|DARAAT Daucus carota aspartate aminotransferase (cytoplasmic isoform) mRNA, complete cds Length = 1523 Score = 83.8 bits (42), Expect = 2e-13 Identities = 133/164 (81%) Strand = Plus / Minus Query: 4 gtaaccgcagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgcc 63 ||||| |||||||| || |||||||||||||| || || || | ||| || | ||||||| Sbjct: 1228 gtaactgcagcatgaatagcatctgcaagatgaggaactgttcgggaactaagacctgcc 1169 Query: 64 atgctgatcctcccatcggatgtcatgtaaatgtgatattcctgcctcatgaaggcgact 123 |||||||||| |||||| ||||||| || || ||||| || | ||||||||| |||| Sbjct: 1168 atgctgatccgcccatcagatgtcaaatatatatgatactcattggtcatgaaggtgact 1109 Query: 124 tgatcactgttgagcccagngaaagtaaacatcccaatttgctt 167 || ||| ||| | ||||| ||| |||||||| ||||||||||| Sbjct: 1108 tgctcagagtttaacccagtgaatgtaaacattccaatttgctt 1065
>emb|X61577.1|MSAAT1MR M.sativa aat-1 mRNA for aspartate aminotransferase Length = 1514 Score = 65.9 bits (33), Expect = 5e-08 Identities = 65/76 (85%) Strand = Plus / Minus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 |||||||| ||||| || ||||| || || || ||||||||||||| |||||||| ||| Sbjct: 1233 gcatgtattgcatcagccagatgtgggactgttttggagctcaaaccagccatgctaatc 1174 Query: 73 ctcccatcggatgtca 88 |||||||| ||||||| Sbjct: 1173 ctcccatcagatgtca 1158 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 gaaagtaaacatcccaatttgctt 167 |||||||||||| ||||||||||| Sbjct: 1102 gaaagtaaacattccaatttgctt 1079
>gb|DQ455441.1| Medicago truncatula cDNA-AFLP fragment BT32M32_382 sequence Length = 298 Score = 65.9 bits (33), Expect = 5e-08 Identities = 65/76 (85%) Strand = Plus / Minus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 |||||||| ||||| || ||||| || || || ||||||||||||| |||||||| ||| Sbjct: 277 gcatgtattgcatcggccagatgtgggactgttttggagctcaaaccagccatgctaatc 218 Query: 73 ctcccatcggatgtca 88 |||||||| ||||||| Sbjct: 217 ctcccatcagatgtca 202 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 gaaagtaaacatcccaatttgctt 167 |||||||||||| ||||||||||| Sbjct: 146 gaaagtaaacattccaatttgctt 123
>ref|NM_104958.2| Arabidopsis thaliana ASP4 (ASPARTATE AMINOTRANSFERASE 4); catalytic/ transaminase/ transferase, transferring nitrogenous groups AT1G62800 (ASP4) transcript variant AT1G62800.1 mRNA, complete cds Length = 1490 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 60 tgccatgctgatcctcccatcggatgtcatgtaaatgtgatattc 104 ||||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 1190 tgccatgcttatcctcccatcataagtcatgtaaatgtgatattc 1146
>ref|NM_179507.1| Arabidopsis thaliana ASP4 (ASPARTATE AMINOTRANSFERASE 4); catalytic/ transaminase/ transferase, transferring nitrogenous groups AT1G62800 (ASP4) transcript variant AT1G62800.2 mRNA, complete cds Length = 1496 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 60 tgccatgctgatcctcccatcggatgtcatgtaaatgtgatattc 104 ||||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 1196 tgccatgcttatcctcccatcataagtcatgtaaatgtgatattc 1152
>ref|NM_121190.2| Arabidopsis thaliana ASP3 (ASPARTATE AMINOTRANSFERASE 3) AT5G11520 (ASP3) mRNA, complete cds Length = 1561 Score = 58.0 bits (29), Expect = 1e-05 Identities = 73/88 (82%) Strand = Plus / Minus Query: 11 cagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctga 70 ||||||| || || |||||||| || || |||||| | || |||| ||| |||||||| | Sbjct: 1373 cagcatggatagcgtctgcaaggtgaggtacagtcttcgaactcagaccagccatgctta 1314 Query: 71 tcctcccatcggatgtcatgtaaatgtg 98 ||||||| || ||||||||||| ||||| Sbjct: 1313 tcctcccgtcagatgtcatgtagatgtg 1286
>emb|X94184.1|LJAAT L.japonicus mRNA for aspartate aminotransferase Length = 1753 Score = 58.0 bits (29), Expect = 1e-05 Identities = 64/76 (84%) Strand = Plus / Minus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 |||||||| ||||| || ||||| || || || |||| |||||||| |||||||| ||| Sbjct: 1320 gcatgtatagcatccgccagatgtgggacggttttggaactcaaaccagccatgctaatc 1261 Query: 73 ctcccatcggatgtca 88 | |||||||||||||| Sbjct: 1260 cgcccatcggatgtca 1245
>gb|AY079310.1| Arabidopsis thaliana putative aspartate aminotransferase ASP3 (At5g11520) mRNA, complete cds Length = 1381 Score = 58.0 bits (29), Expect = 1e-05 Identities = 73/88 (82%) Strand = Plus / Minus Query: 11 cagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctga 70 ||||||| || || |||||||| || || |||||| | || |||| ||| |||||||| | Sbjct: 1330 cagcatggatagcgtctgcaaggtgaggtacagtcttcgaactcagaccagccatgctta 1271 Query: 71 tcctcccatcggatgtcatgtaaatgtg 98 ||||||| || ||||||||||| ||||| Sbjct: 1270 tcctcccgtcagatgtcatgtagatgtg 1243
>gb|AY050765.1| Arabidopsis thaliana putative aspartate aminotransferase Asp3 (At5g11520) mRNA, complete cds Length = 1567 Score = 58.0 bits (29), Expect = 1e-05 Identities = 73/88 (82%) Strand = Plus / Minus Query: 11 cagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctga 70 ||||||| || || |||||||| || || |||||| | || |||| ||| |||||||| | Sbjct: 1373 cagcatggatagcgtctgcaaggtgaggtacagtcttcgaactcagaccagccatgctta 1314 Query: 71 tcctcccatcggatgtcatgtaaatgtg 98 ||||||| || ||||||||||| ||||| Sbjct: 1313 tcctcccgtcagatgtcatgtagatgtg 1286
>emb|BX818344.1|CNS0AE3W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZA03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 580 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 60 tgccatgctgatcctcccatcggatgtcatgtaaatgtgatattc 104 ||||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 429 tgccatgcttatcctcccatcataagtcatgtaaatgtgatattc 385
>emb|BX831247.1|CNS0A0T5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS71ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 308 Score = 58.0 bits (29), Expect = 1e-05 Identities = 73/88 (82%) Strand = Plus / Minus Query: 11 cagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctga 70 ||||||| || || |||||||| || || |||||| | || |||| ||| |||||||| | Sbjct: 132 cagcatggatagcgtctgcaaggtgaggtacagtcttcgaactcagaccagccatgctta 73 Query: 71 tcctcccatcggatgtcatgtaaatgtg 98 ||||||| || ||||||||||| ||||| Sbjct: 72 tcctcccgtcagatgtcatgtagatgtg 45
>gb|AF034210.1|AF034210 Glycine max aspartate aminotransferase glyoxysomal isozyme AAT1 precursor and aspartate aminotransferase cytosolic isozyme AAT2 (AAT) mRNA, complete cds Length = 1690 Score = 58.0 bits (29), Expect = 1e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 13 gcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctgatc 72 |||||||| ||||| || ||| | || ||||| |||| |||| ||| |||||||| ||| Sbjct: 1500 gcatgtatcgcatccgccagaagtgggacagttttggaactcagaccagccatgctaatc 1441 Query: 73 ctcccatcggatgtcatgta 92 |||||||| ||||||||||| Sbjct: 1440 ctcccatcagatgtcatgta 1421
>gb|U15035.1|ATU15035 Arabidopsis thaliana aspartate aminotransferase (Asp4) mRNA, complete cds Length = 1444 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 60 tgccatgctgatcctcccatcggatgtcatgtaaatgtgatattc 104 ||||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 1190 tgccatgcttatcctcccatcataagtcatgtaaatgtgatattc 1146
>gb|U15034.1|ATU15034 Arabidopsis thaliana aspartate aminotransferase (Asp3) mRNA, complete cds Length = 1548 Score = 58.0 bits (29), Expect = 1e-05 Identities = 73/88 (82%) Strand = Plus / Minus Query: 11 cagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgccatgctga 70 ||||||| || || |||||||| || || |||||| | || |||| ||| |||||||| | Sbjct: 1373 cagcatggatagcgtctgcaaggtgaggtacagtcttcgaactcagaccagccatgctta 1314 Query: 71 tcctcccatcggatgtcatgtaaatgtg 98 ||||||| || ||||||||||| ||||| Sbjct: 1313 tcctcccgtcagatgtcatgtagatgtg 1286
>ref|NM_121960.3| Arabidopsis thaliana ASP2 (ASPARTATE AMINOTRANSFERASE 2) AT5G19550 (ASP2) mRNA, complete cds Length = 1535 Score = 52.0 bits (26), Expect = 8e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 57 acctgccatgctgatcctcccatcggatgtcatgtaaatgtg 98 |||||||||||| || |||||||| || |||||||||||||| Sbjct: 1247 acctgccatgcttattctcccatcagaggtcatgtaaatgtg 1206
>gb|AY128343.1| Arabidopsis thaliana aspartate aminotransferase Asp2 (At5g19550) mRNA, complete cds Length = 811 Score = 52.0 bits (26), Expect = 8e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 57 acctgccatgctgatcctcccatcggatgtcatgtaaatgtg 98 |||||||||||| || |||||||| || |||||||||||||| Sbjct: 648 acctgccatgcttattctcccatcagaggtcatgtaaatgtg 607
>emb|BX816635.1|CNS0ADC7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH5ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 610 Score = 52.0 bits (26), Expect = 8e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 63 catgctgatcctcccatcggatgtcatgtaaatgtgatattc 104 |||||| ||||||||||| | |||||||||||||||||||| Sbjct: 438 catgcttatcctcccatcataagtcatgtaaatgtgatattc 397
>emb|BX829537.1|CNS09ZWQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1486 Score = 52.0 bits (26), Expect = 8e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 57 acctgccatgctgatcctcccatcggatgtcatgtaaatgtg 98 |||||||||||| || |||||||| || |||||||||||||| Sbjct: 1245 acctgccatgcttattctcccatcagaagtcatgtaaatgtg 1204
>gb|U15033.1|ATU15033 Arabidopsis thaliana aspartate aminotransferase (Asp2) mRNA, complete cds Length = 1515 Score = 52.0 bits (26), Expect = 8e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 57 acctgccatgctgatcctcccatcggatgtcatgtaaatgtg 98 |||||||||||| || |||||||| || |||||||||||||| Sbjct: 1241 acctgccatgcttattctcccatcagaggtcatgtaaatgtg 1200
>emb|BX833089.1|CNS09Z3N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZF11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 920 Score = 48.1 bits (24), Expect = 0.013 Identities = 77/95 (81%) Strand = Plus / Minus Query: 4 gtaaccgcagcatgtatggcatctgcaagatggggnacagtcctggagctcaaacctgcc 63 ||||| |||||||| || ||||| ||||| || || || ||| | || || | |||| || Sbjct: 773 gtaactgcagcatgcatagcatcggcaaggtgaggcactgtcttcgaacttagacctacc 714 Query: 64 atgctgatcctcccatcggatgtcatgtaaatgtg 98 ||||| || |||||||| || |||||||||||||| Sbjct: 713 atgcttattctcccatcagaggtcatgtaaatgtg 679
>dbj|D10968.1|RICSS3AAT Oryza sativa mRNA for aspartate aminotransferase Length = 483 Score = 44.1 bits (22), Expect = 0.20 Identities = 31/34 (91%) Strand = Plus / Minus Query: 206 tcagtgcatcaaaaagctgctccctcatgctaat 239 |||| |||||||||||||| | |||||||||||| Sbjct: 266 tcagagcatcaaaaagctgttgcctcatgctaat 233
>gb|L25334.1|ALFAAT1A Medicago sativa aspartate aminotransferase (AAT1) gene, complete cds Length = 5474 Score = 44.1 bits (22), Expect = 0.20 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tggagctcaaacctgccatgctgatcctcc 76 ||||||||||||| |||||||| ||||||| Sbjct: 4950 tggagctcaaaccagccatgctaatcctcc 4921 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 gaaagtaaacatcccaatttgctt 167 |||||||||||| ||||||||||| Sbjct: 4224 gaaagtaaacattccaatttgctt 4201
>gb|M92094.1|LUPAATP1A L.angustifolius aspartate aminotransferase P1 (AAT-P1) mRNA, complete cds Length = 1454 Score = 44.1 bits (22), Expect = 0.20 Identities = 37/42 (88%) Strand = Plus / Minus Query: 47 tggagctcaaacctgccatgctgatcctcccatcggatgtca 88 |||| |||| ||| |||||||| ||||||||||| ||||||| Sbjct: 1243 tggaactcagaccagccatgctaatcctcccatcagatgtca 1202
>gb|AC148932.3| Pan troglodytes BAC clone CH251-571G8 from chromosome 7, complete sequence Length = 232604 Score = 42.1 bits (21), Expect = 0.79 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 aaaagctgctccctcatgcta 237 ||||||||||||||||||||| Sbjct: 135289 aaaagctgctccctcatgcta 135309
>gb|AC010085.3|AC010085 Homo sapiens BAC clone RP11-168P10 from 7, complete sequence Length = 121912 Score = 42.1 bits (21), Expect = 0.79 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 aaaagctgctccctcatgcta 237 ||||||||||||||||||||| Sbjct: 42579 aaaagctgctccctcatgcta 42559
>gb|AC018633.2|AC018633 Homo sapiens clone UWGC:djs1 or RP11-16G1 from 7p14-15, complete sequence Length = 169234 Score = 42.1 bits (21), Expect = 0.79 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 aaaagctgctccctcatgcta 237 ||||||||||||||||||||| Sbjct: 138774 aaaagctgctccctcatgcta 138794
>gb|BT016777.1| Zea mays clone Contig610 mRNA sequence Length = 1715 Score = 40.1 bits (20), Expect = 3.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 61 gccatgctgatcctcccatcggatgtcatgtaaatgtgatattc 104 |||||||| |||||||||| | |||||||||||||| ||||| Sbjct: 1370 gccatgcttatcctcccattgcgggtcatgtaaatgtggtattc 1327
>gb|AC025477.6| Homo sapiens chromosome 5 clone RP11-432A10, complete sequence Length = 154272 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 catcaaaaagctgctccctc 231 |||||||||||||||||||| Sbjct: 8097 catcaaaaagctgctccctc 8116
>gb|AC093551.3| Drosophila melanogaster 3L BAC RP98-48C13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179055 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 catcaaaaagctgctccctc 231 |||||||||||||||||||| Sbjct: 87861 catcaaaaagctgctccctc 87880
>gb|AC116364.2| Homo sapiens chromosome 5 clone RP11-767I1, complete sequence Length = 188887 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 catcaaaaagctgctccctc 231 |||||||||||||||||||| Sbjct: 24900 catcaaaaagctgctccctc 24881
>gb|AC007190.4|AC007190 Genomic sequence for Arabidopsis thaliana BAC F23N19 from chromosome I, complete sequence Length = 86801 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gtcatgtaaatgtgatattc 104 |||||||||||||||||||| Sbjct: 67669 gtcatgtaaatgtgatattc 67688
>gb|AY108926.1| Zea mays PCO126861 mRNA sequence Length = 1278 Score = 40.1 bits (20), Expect = 3.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 61 gccatgctgatcctcccatcggatgtcatgtaaatgtgatattc 104 |||||||| |||||||||| | |||||||||||||| ||||| Sbjct: 841 gccatgcttatcctcccattgcgggtcatgtaaatgtggtattc 798
>gb|AE003592.3| Drosophila melanogaster chromosome 3L, section 73 of 83 of the complete sequence Length = 323816 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 catcaaaaagctgctccctc 231 |||||||||||||||||||| Sbjct: 80741 catcaaaaagctgctccctc 80760
>gb|AC157768.4| Mus musculus chromosome 1, clone RP24-308M3, complete sequence Length = 202770 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 gccatgctgatcctcccatc 80 |||||||||||||||||||| Sbjct: 61408 gccatgctgatcctcccatc 61389 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,635,315 Number of Sequences: 3902068 Number of extensions: 1635315 Number of successful extensions: 23922 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 23813 Number of HSP's gapped (non-prelim): 94 length of query: 242 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 220 effective length of database: 17,147,199,772 effective search space: 3772383949840 effective search space used: 3772383949840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)