ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14f21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X98244.2|ZMANNP33 Z.mays mRNA for annexin p33 232 1e-57
2gb|AY105151.1| Zea mays PCO072293 mRNA sequence 232 1e-57
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
4dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
5dbj|AK072559.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 5e-35
6gb|AF542967.1| Triticum aestivum annexin P35-like mRNA, partial ... 96 2e-16
7ref|XM_467846.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
9dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
10dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
11dbj|AK101787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
12emb|X98245.1|ZMANNP35 Z.mays mRNA for annexin p35 86 2e-13
13gb|AY105105.1| Zea mays PCO122403 mRNA sequence 86 2e-13
14gb|AF006197.1| Lavatera thuringiaca annexin (AnxLt1) mRNA, compl... 50 0.009
15gb|U73746.2|GHU73746 Gossypium hirsutum annexin (AnnGh1) mRNA, p... 48 0.035
16gb|AC016758.7| Homo sapiens BAC clone RP11-535E19 from 2, comple... 46 0.14
17gb|AC016705.4|AC016705 Homo sapiens BAC clone RP11-210M15 from 1... 44 0.54
18emb|AL732571.8| Mouse DNA sequence from clone RP23-23D11 on chro... 44 0.54
19emb|BX322542.23| Zebrafish DNA sequence from clone CH211-214I13 ... 42 2.1
20emb|AL512641.9| Human DNA sequence from clone RP11-139J15 on chr... 42 2.1
21dbj|AK172422.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 2.1
22dbj|AK089650.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 2.1
23dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.1
24gb|AC102632.8| Mus musculus chromosome 5, clone RP23-286C5, comp... 42 2.1
25gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, comp... 42 2.1
26gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 2.1
27emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chr... 42 2.1
28gb|AC141632.4| Mus musculus BAC clone RP24-100G24 from 3, comple... 42 2.1
29gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome... 40 8.5
30gb|AF186998.5| Homo sapiens chromosome 8 clone CTB-878E2 map q21... 40 8.5
31gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, co... 40 8.5
32gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosom... 40 8.5
33gb|AC132095.3| Mus musculus BAC clone RP24-381M10 from chromosom... 40 8.5
34emb|Z73974.1|CEF29F11 Caenorhabditis elegans Cosmid F29F11, comp... 40 8.5
35gb|AC103770.5| Homo sapiens chromosome 8, clone RP11-122A3, comp... 40 8.5
36ref|XM_815175.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.5
37gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, comple... 40 8.5
38gb|AC073068.8| Homo sapiens BAC clone RP11-159I18 from 7, comple... 40 8.5
39emb|AL353806.9| Human DNA sequence from clone RP11-174A8 on chro... 40 8.5
40emb|AL035660.16|HS300I2 Human DNA sequence from clone RP1-300I2 ... 40 8.5
41emb|CR381695.4| Zebrafish DNA sequence from clone CH211-265I20 i... 40 8.5
42gb|DP000041.1| Gorilla gorilla gorilla target 106 genomic scaffold 40 8.5
43gb|DP000045.1| Pongo pygmaeus target 106 genomic scaffold 40 8.5
44emb|BX511003.9| Zebrafish DNA sequence from clone CH211-69F16 in... 40 8.5
45emb|BX855591.11| Zebrafish DNA sequence from clone DKEY-237H21 i... 40 8.5
46dbj|AK037541.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 8.5
47gb|AY634306.1| Caenorhabditis briggsae strain AF16 gsa-1 gene, c... 40 8.5
48emb|BX465203.6| Zebrafish DNA sequence from clone CH211-221F10 i... 40 8.5
49gb|U89609.1|GHU89609 Gossypium hirsutum fiber annexin mRNA, comp... 40 8.5
50emb|AL928611.9| Mouse DNA sequence from clone RP23-263O5 on chro... 40 8.5
51gb|AC122424.4| Mus musculus BAC clone RP24-173E19 from 8, comple... 40 8.5
52dbj|AB015752.1| Homo sapiens genomic DNA, chromosome 8q21, BAC c... 40 8.5 
>emb|X98244.2|ZMANNP33 Z.mays mRNA for annexin p33
          Length = 1277

 Score =  232 bits (117), Expect = 1e-57
 Identities = 246/289 (85%)
 Strand = Plus / Minus

                                                                        
Query: 335  tcactccttccccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgc 394
            |||||||| ||||||||| || ||||||||| |||||||||||||||||||||| || ||
Sbjct: 1029 tcactcctgccccaggagcgcgaggagcatgctctcgtagtcgccggaggtgtcccccgc 970

                                                                        
Query: 395  gacggccttctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcag 454
            |||||||  |||||  || || ||||||||||||||||| ||||| || ||||| || ||
Sbjct: 969  gacggcccgctccagcggcacgctgttcctcttctggtacgcctccttaatcagtttgag 910

                                                                        
Query: 455  gtccacctcggcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccc 514
            ||||||||| |||||||| || |||||||| || |||||||||||||| || ||   |||
Sbjct: 909  gtccacctcagcgcgggtggtgatgaccctggtcagggagttctcatctgtgcctagccc 850

                                                                        
Query: 515  tgcaatggccaacctggcaaccttctcaaagtacctatcagggcaggtgaagcaccggat 574
             || ||||||  ||| || ||||||||||||||||| ||||||||  |||||||||||||
Sbjct: 849  cgctatggcctgcctagccaccttctcaaagtacctgtcagggcaactgaagcaccggat 790

                                                             
Query: 575  aaccgcccgcagggttttgaggaactcatccttggggtcagccttcaga 623
             | ||||||||| ||| ||||| |||| |||| ||||||||||||||||
Sbjct: 789  gatcgcccgcagcgttctgaggtactcgtcctgggggtcagccttcaga 741
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>gb|AY105151.1| Zea mays PCO072293 mRNA sequence
          Length = 1369

 Score =  232 bits (117), Expect = 1e-57
 Identities = 246/289 (85%)
 Strand = Plus / Minus

                                                                        
Query: 335  tcactccttccccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgc 394
            |||||||| ||||||||| || ||||||||| |||||||||||||||||||||| || ||
Sbjct: 1046 tcactcctgccccaggagcgcgaggagcatgctctcgtagtcgccggaggtgtcccccgc 987

                                                                        
Query: 395  gacggccttctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcag 454
            |||||||  |||||  || || ||||||||||||||||| ||||| || ||||| || ||
Sbjct: 986  gacggcccgctccagcggcacgctgttcctcttctggtacgcctccttaatcagtttgag 927

                                                                        
Query: 455  gtccacctcggcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccc 514
            ||||||||| |||||||| || |||||||| || |||||||||||||| || ||   |||
Sbjct: 926  gtccacctcagcgcgggtggtgatgaccctggtcagggagttctcatctgtgcctagccc 867

                                                                        
Query: 515  tgcaatggccaacctggcaaccttctcaaagtacctatcagggcaggtgaagcaccggat 574
             || ||||||  ||| || ||||||||||||||||| ||||||||  |||||||||||||
Sbjct: 866  cgctatggcctgcctagccaccttctcaaagtacctgtcagggcaactgaagcaccggat 807

                                                             
Query: 575  aaccgcccgcagggttttgaggaactcatccttggggtcagccttcaga 623
             | ||||||||| ||| ||||| |||| |||| ||||||||||||||||
Sbjct: 806  gatcgcccgcagcgttctgaggtactcgtcctgggggtcagccttcaga 758
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  157 bits (79), Expect = 5e-35
 Identities = 181/215 (84%)
 Strand = Plus / Minus

                                                                           
Query: 345     cccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgcgacggccttc 404
               ||||| || ||||| |||||  |||||||||| ||||||||||| |||||||| ||   |
Sbjct: 6264287 cccagaagagcaagaagcatcctctcgtagtccccggaggtgtcccctgcgaccgcacgc 6264228

                                                                           
Query: 405     tccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcg 464
               ||||  ||||||||||||||||||||||| |||||  ||||||||||||| |||||||||
Sbjct: 6264227 tccagcgggacactgttcctcttctggtacgcctccgtgatcagcttcagatccacctcg 6264168

                                                                           
Query: 465     gcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccctgcaatggcc 524
               || || || || |||| |||||||||||||||||| || |||||  | ||||| ||||||
Sbjct: 6264167 gcacgagtggtaatgatcctagtgagggagttctcgtctgttcccatgcctgcgatggcc 6264108

                                                  
Query: 525     aacctggcaaccttctcaaagtacctatcagggca 559
               ||||||   || ||||| |||||||| ||||||||
Sbjct: 6264107 aacctgatgactttctcgaagtacctgtcagggca 6264073
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>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0516A04
          Length = 145107

 Score =  157 bits (79), Expect = 5e-35
 Identities = 181/215 (84%)
 Strand = Plus / Minus

                                                                         
Query: 345   cccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgcgacggccttc 404
             ||||| || ||||| |||||  |||||||||| ||||||||||| |||||||| ||   |
Sbjct: 58363 cccagaagagcaagaagcatcctctcgtagtccccggaggtgtcccctgcgaccgcacgc 58304

                                                                         
Query: 405   tccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcg 464
             ||||  ||||||||||||||||||||||| |||||  ||||||||||||| |||||||||
Sbjct: 58303 tccagcgggacactgttcctcttctggtacgcctccgtgatcagcttcagatccacctcg 58244

                                                                         
Query: 465   gcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccctgcaatggcc 524
             || || || || |||| |||||||||||||||||| || |||||  | ||||| ||||||
Sbjct: 58243 gcacgagtggtaatgatcctagtgagggagttctcgtctgttcccatgcctgcgatggcc 58184

                                                
Query: 525   aacctggcaaccttctcaaagtacctatcagggca 559
             ||||||   || ||||| |||||||| ||||||||
Sbjct: 58183 aacctgatgactttctcgaagtacctgtcagggca 58149
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>dbj|AK072559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132A10, full
            insert sequence
          Length = 1274

 Score =  157 bits (79), Expect = 5e-35
 Identities = 181/215 (84%)
 Strand = Plus / Minus

                                                                        
Query: 345  cccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgcgacggccttc 404
            ||||| || ||||| |||||  |||||||||| ||||||||||| |||||||| ||   |
Sbjct: 1036 cccagaagagcaagaagcatcctctcgtagtccccggaggtgtcccctgcgaccgcacgc 977

                                                                        
Query: 405  tccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcg 464
            ||||  ||||||||||||||||||||||| |||||  ||||||||||||| |||||||||
Sbjct: 976  tccagcgggacactgttcctcttctggtacgcctccgtgatcagcttcagatccacctcg 917

                                                                        
Query: 465  gcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccctgcaatggcc 524
            || || || || |||| |||||||||||||||||| || |||||  | ||||| ||||||
Sbjct: 916  gcacgagtggtaatgatcctagtgagggagttctcgtctgttcccatgcctgcgatggcc 857

                                               
Query: 525  aacctggcaaccttctcaaagtacctatcagggca 559
            ||||||   || ||||| |||||||| ||||||||
Sbjct: 856  aacctgatgactttctcgaagtacctgtcagggca 822
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>gb|AF542967.1| Triticum aestivum annexin P35-like mRNA, partial sequence
          Length = 766

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 166/204 (81%), Gaps = 1/204 (0%)
 Strand = Plus / Minus

                                                                       
Query: 411 gggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcggcgcgg 470
           ||||| ||||||||||||||||| ||||| || |||| ||||||||||||||||||||| 
Sbjct: 636 gggacgctgttcctcttctggtacgcctcctttatcaccttcaggtccacctcggcgcga 577

                                                                       
Query: 471 gtcgttatgaccctagt-gagggagttctcatcggttccattccctgcaatggccaacct 529
           || ||||||||||| ||  |||| |||||| || || ||    ||| ||| |||||||| 
Sbjct: 576 gtggttatgaccctcgtaaagggtgttctcgtctgtgccgacgcctccaagggccaaccg 517

                                                                       
Query: 530 ggcaaccttctcaaagtacctatcagggcaggtgaagcaccggataaccgcccgcagggt 589
           |   | |||||||||||| || |||||||| ||||| ||||  || | ||||| ||||||
Sbjct: 516 gatgatcttctcaaagtatctgtcagggcaagtgaaacaccttatgatcgccctcagggt 457

                                   
Query: 590 tttgaggaactcatccttggggtc 613
           |  ||||||||| | |||||||||
Sbjct: 456 tgagaggaactcgttcttggggtc 433
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>ref|XM_467846.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1223

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                       
Query: 404 ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 463
           |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 991 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 932

                                               
Query: 464 ggcgcgggtcgttatgaccctagtgagggagttctc 499
           ||| || || ||||||| ||| || || ||||||||
Sbjct: 931 ggcacgagttgttatgatccttgtaagagagttctc 896



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 537 ttctcaaagtacctatcagggcaggtgaagca 568
           ||||||||||| || |||||||| ||||||||
Sbjct: 858 ttctcaaagtatctgtcagggcaagtgaagca 827
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                            
Query: 404      ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 463
                |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 31716929 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 31716988

                                                    
Query: 464      ggcgcgggtcgttatgaccctagtgagggagttctc 499
                ||| || || ||||||| ||| || || ||||||||
Sbjct: 31716989 ggcacgagttgttatgatccttgtaagagagttctc 31717024



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 537      ttctcaaagtacctatcagggcaggtgaagca 568
                ||||||||||| || |||||||| ||||||||
Sbjct: 31717062 ttctcaaagtatctgtcagggcaagtgaagca 31717093
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>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0627E03
          Length = 159861

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                         
Query: 404   ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 463
             |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 12727 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 12786

                                                 
Query: 464   ggcgcgggtcgttatgaccctagtgagggagttctc 499
             ||| || || ||||||| ||| || || ||||||||
Sbjct: 12787 ggcacgagttgttatgatccttgtaagagagttctc 12822



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 537   ttctcaaagtacctatcagggcaggtgaagca 568
             ||||||||||| || |||||||| ||||||||
Sbjct: 12860 ttctcaaagtatctgtcagggcaagtgaagca 12891
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>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1288_G09
          Length = 109672

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                         
Query: 404   ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 463
             |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 96716 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 96775

                                                 
Query: 464   ggcgcgggtcgttatgaccctagtgagggagttctc 499
             ||| || || ||||||| ||| || || ||||||||
Sbjct: 96776 ggcacgagttgttatgatccttgtaagagagttctc 96811



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 537   ttctcaaagtacctatcagggcaggtgaagca 568
             ||||||||||| || |||||||| ||||||||
Sbjct: 96849 ttctcaaagtatctgtcagggcaagtgaagca 96880
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>dbj|AK101787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065F07, full
           insert sequence
          Length = 1223

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                       
Query: 404 ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 463
           |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 991 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 932

                                               
Query: 464 ggcgcgggtcgttatgaccctagtgagggagttctc 499
           ||| || || ||||||| ||| || || ||||||||
Sbjct: 931 ggcacgagttgttatgatccttgtaagagagttctc 896



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 537 ttctcaaagtacctatcagggcaggtgaagca 568
           ||||||||||| || |||||||| ||||||||
Sbjct: 858 ttctcaaagtatctgtcagggcaagtgaagca 827
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>emb|X98245.1|ZMANNP35 Z.mays mRNA for annexin p35
          Length = 1257

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                       
Query: 537 ttctcaaagtacctatcagggcaggtgaagcaccggataaccgcccgcagggttttgagg 596
           ||||| ||||| || ||||||||||||||||||||||| | ||||||||| |||   || 
Sbjct: 874 ttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgcccgcagtgttgaaaga 815

                                      
Query: 597 aactcatccttggggtcagccttcaga 623
           |||||||||||||||||||| ||||||
Sbjct: 814 aactcatccttggggtcagctttcaga 788



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                       
Query: 414 acactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcggcgcgggtc 473
           |||||||| |||||||| || ||||| || |||||||||||||| ||||||||||| || 
Sbjct: 997 acactgtttctcttctgataagcctcctttatcagcttcaggtcgacctcggcgcgagta 938

                             
Query: 474 gttatgaccctagtgagg 491
           |||| |||||| ||||||
Sbjct: 937 gttacgaccctggtgagg 920
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>gb|AY105105.1| Zea mays PCO122403 mRNA sequence
          Length = 1401

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                       
Query: 537 ttctcaaagtacctatcagggcaggtgaagcaccggataaccgcccgcagggttttgagg 596
           ||||| ||||| || ||||||||||||||||||||||| | ||||||||| |||   || 
Sbjct: 968 ttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgcccgcagtgttgaaaga 909

                                      
Query: 597 aactcatccttggggtcagccttcaga 623
           |||||||||||||||||||| ||||||
Sbjct: 908 aactcatccttggggtcagctttcaga 882



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                        
Query: 414  acactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcggcgcgggtc 473
            |||||||| |||||||| || ||||| || |||||||||||||| ||||||||||| || 
Sbjct: 1091 acactgtttctcttctgataagcctcctttatcagcttcaggtcgacctcggcgcgagta 1032

                              
Query: 474  gttatgaccctagtgagg 491
            |||| |||||| ||||||
Sbjct: 1031 gttacgaccctggtgagg 1014
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>gb|AF006197.1| Lavatera thuringiaca annexin (AnxLt1) mRNA, complete cds
          Length = 1112

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 594 aggaactcatccttggggtcagccttcag 622
           |||||||||||||| ||||||||||||||
Sbjct: 687 aggaactcatccttagggtcagccttcag 659
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>gb|U73746.2|GHU73746 Gossypium hirsutum annexin (AnnGh1) mRNA, partial cds
          Length = 948

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 594 aggaactcatccttggggtcagccttca 621
           |||||||||||||| |||||||||||||
Sbjct: 683 aggaactcatccttagggtcagccttca 656
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>gb|AC016758.7| Homo sapiens BAC clone RP11-535E19 from 2, complete sequence
          Length = 64256

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 16    tctttaaaagatttaggaactga 38
             |||||||||||||||||||||||
Sbjct: 34964 tctttaaaagatttaggaactga 34942
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>gb|AC016705.4|AC016705 Homo sapiens BAC clone RP11-210M15 from 15, complete sequence
          Length = 177964

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 140    tgaacatctaagctagtacaaa 161
              ||||||||||||||||||||||
Sbjct: 121419 tgaacatctaagctagtacaaa 121440
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>emb|AL732571.8| Mouse DNA sequence from clone RP23-23D11 on chromosome 4, complete
             sequence
          Length = 214061

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 9     ttctccctctttaaaagattta 30
             ||||||||||||||||||||||
Sbjct: 99806 ttctccctctttaaaagattta 99785
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>emb|BX322542.23| Zebrafish DNA sequence from clone CH211-214I13 in linkage group 7,
             complete sequence
          Length = 59593

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    ttcaattcaagcaaaatacag 68
             |||||||||||||||||||||
Sbjct: 55712 ttcaattcaagcaaaatacag 55732
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>emb|AL512641.9| Human DNA sequence from clone RP11-139J15 on chromosome 10 Contains the
              5' end of a novel gene (LOC221078) (FLJ23743), two novel
              genes, the gene for ADP-ribosylation-like factor 8 (ARL8),
              a programmed cell death 8 (apoptosis-inducing factor)
              (PDCD8) pseudogene and a CpG island, complete sequence
          Length = 172688

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     cagatgcaattcagatttttc 86
              |||||||||||||||||||||
Sbjct: 154076 cagatgcaattcagatttttc 154056
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>dbj|AK172422.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830206O22 product:unclassifiable, full
            insert sequence
          Length = 2363

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 80   atttttcaggcttacagaaaa 100
            |||||||||||||||||||||
Sbjct: 1711 atttttcaggcttacagaaaa 1691
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>dbj|AK089650.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830007A21 product:unclassifiable, full
            insert sequence
          Length = 2363

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 80   atttttcaggcttacagaaaa 100
            |||||||||||||||||||||
Sbjct: 1711 atttttcaggcttacagaaaa 1691
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 376     cgccggaggtgtcgcctgcgacggc 400
               |||||||||||||||| ||||||||
Sbjct: 4911239 cgccggaggtgtcgcccgcgacggc 4911263
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>gb|AC102632.8| Mus musculus chromosome 5, clone RP23-286C5, complete sequence
          Length = 200020

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 187   gtaaagcacacctctctctat 207
             |||||||||||||||||||||
Sbjct: 67083 gtaaagcacacctctctctat 67103
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>gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, complete sequence
          Length = 209209

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 80     atttttcaggcttacagaaaa 100
              |||||||||||||||||||||
Sbjct: 189863 atttttcaggcttacagaaaa 189843
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 455    gtccacctcggcgcgggtcgt 475
              |||||||||||||||||||||
Sbjct: 497372 gtccacctcggcgcgggtcgt 497352
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>emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chromosome 11, complete
             sequence
          Length = 114581

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 94    cagaaaactcacttttttaac 114
             |||||||||||||||||||||
Sbjct: 25467 cagaaaactcacttttttaac 25447
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>gb|AC141632.4| Mus musculus BAC clone RP24-100G24 from 3, complete sequence
          Length = 180488

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 80    atttttcaggcttacagaaaa 100
             |||||||||||||||||||||
Sbjct: 21222 atttttcaggcttacagaaaa 21202
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>gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome 6, complete sequence
          Length = 176868

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    agaaaactcacttttttaac 114
             ||||||||||||||||||||
Sbjct: 36980 agaaaactcacttttttaac 36999
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>gb|AF186998.5| Homo sapiens chromosome 8 clone CTB-878E2 map q21.3, complete sequence
          Length = 125222

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 338   ctccttccccaggagggcaaggagcatg 365
             ||||||||||| |||||||||| |||||
Sbjct: 25802 ctccttccccaagagggcaaggggcatg 25829
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>gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, complete sequence
          Length = 168641

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    agaaaactcacttttttaac 114
             ||||||||||||||||||||
Sbjct: 49680 agaaaactcacttttttaac 49661
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>gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosome 8, complete sequence
          Length = 208404

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    cagggtttattctctgattt 291
              ||||||||||||||||||||
Sbjct: 160599 cagggtttattctctgattt 160618
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>gb|AC132095.3| Mus musculus BAC clone RP24-381M10 from chromosome 17, complete
             sequence
          Length = 187926

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    aattcagatttttcaggctt 92
             ||||||||||||||||||||
Sbjct: 19739 aattcagatttttcaggctt 19720
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>emb|Z73974.1|CEF29F11 Caenorhabditis elegans Cosmid F29F11, complete sequence
          Length = 36258

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 63    atacagatgcaattcagatttttc 86
             |||||||||||||| |||||||||
Sbjct: 24808 atacagatgcaattaagatttttc 24785
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>gb|AC103770.5| Homo sapiens chromosome 8, clone RP11-122A3, complete sequence
          Length = 176632

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 338    ctccttccccaggagggcaaggagcatg 365
              ||||||||||| |||||||||| |||||
Sbjct: 130824 ctccttccccaagagggcaaggggcatg 130797
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>ref|XM_815175.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508277.80) partial mRNA
          Length = 822

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 555 gggcaggtgaagcaccggat 574
           ||||||||||||||||||||
Sbjct: 637 gggcaggtgaagcaccggat 656
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>gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, complete sequence
          Length = 194372

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     aattcagatttttcaggctt 92
              ||||||||||||||||||||
Sbjct: 163987 aattcagatttttcaggctt 163968
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>gb|AC073068.8| Homo sapiens BAC clone RP11-159I18 from 7, complete sequence
          Length = 171058

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   tttgagatatgaaaaggata 308
             ||||||||||||||||||||
Sbjct: 78955 tttgagatatgaaaaggata 78936
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>emb|AL353806.9| Human DNA sequence from clone RP11-174A8 on chromosome 9 Contains part
             of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor
             protein 2 (paralemmin 2), complete sequence
          Length = 111051

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    actgatgtactcgattcaat 53
             ||||||||||||||||||||
Sbjct: 78491 actgatgtactcgattcaat 78472
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>emb|AL035660.16|HS300I2 Human DNA sequence from clone RP1-300I2 on chromosome 20q12-13.12
             Contains a novel gene and the SLPI gene for secretory
             leukocyte protease inhibitor (antileukoproteinase),
             complete sequence
          Length = 63796

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tttcaggcttacagaaaact 102
             ||||||||||||||||||||
Sbjct: 53321 tttcaggcttacagaaaact 53302
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>emb|CR381695.4| Zebrafish DNA sequence from clone CH211-265I20 in linkage group 14,
            complete sequence
          Length = 81999

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 291  tgagatatgaaaaggataac 310
            ||||||||||||||||||||
Sbjct: 8517 tgagatatgaaaaggataac 8498
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>gb|DP000041.1| Gorilla gorilla gorilla target 106 genomic scaffold
          Length = 355851

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     tttcaggcttacagaaaact 102
              ||||||||||||||||||||
Sbjct: 327099 tttcaggcttacagaaaact 327080
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>gb|DP000045.1| Pongo pygmaeus target 106 genomic scaffold
          Length = 644818

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     tttcaggcttacagaaaact 102
              ||||||||||||||||||||
Sbjct: 442530 tttcaggcttacagaaaact 442511
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>emb|BX511003.9| Zebrafish DNA sequence from clone CH211-69F16 in linkage group 1,
             complete sequence
          Length = 151271

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 537   ttctcaaagtacctatcagg 556
             ||||||||||||||||||||
Sbjct: 90000 ttctcaaagtacctatcagg 89981
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>emb|BX855591.11| Zebrafish DNA sequence from clone DKEY-237H21 in linkage group 1,
             complete sequence
          Length = 131858

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 537   ttctcaaagtacctatcagg 556
             ||||||||||||||||||||
Sbjct: 64924 ttctcaaagtacctatcagg 64905
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>dbj|AK037541.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130024J05 product:hypothetical protein,
            full insert sequence
          Length = 2807

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 200  ctctctatcttattctcacc 219
            ||||||||||||||||||||
Sbjct: 1958 ctctctatcttattctcacc 1977
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>gb|AY634306.1| Caenorhabditis briggsae strain AF16 gsa-1 gene, complete cds
          Length = 7325

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 73   aattcagatttttcaggcttacagaaaa 100
            |||||| ||||||||||||| |||||||
Sbjct: 4937 aattcaaatttttcaggctttcagaaaa 4910
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>emb|BX465203.6| Zebrafish DNA sequence from clone CH211-221F10 in linkage group 14,
              complete sequence
          Length = 150992

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    tgagatatgaaaaggataac 310
              ||||||||||||||||||||
Sbjct: 142477 tgagatatgaaaaggataac 142496
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>gb|U89609.1|GHU89609 Gossypium hirsutum fiber annexin mRNA, complete cds
          Length = 1141

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 594 aggaactcatccttggggtcagccttca 621
           |||||||||||||| || ||||||||||
Sbjct: 719 aggaactcatccttaggatcagccttca 692
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>emb|AL928611.9| Mouse DNA sequence from clone RP23-263O5 on chromosome 2, complete
              sequence
          Length = 199317

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    ctctctatcttattctcacc 219
              ||||||||||||||||||||
Sbjct: 170111 ctctctatcttattctcacc 170130
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>gb|AC122424.4| Mus musculus BAC clone RP24-173E19 from 8, complete sequence
          Length = 175181

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    cagggtttattctctgattt 291
              ||||||||||||||||||||
Sbjct: 139626 cagggtttattctctgattt 139607
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>dbj|AB015752.1| Homo sapiens genomic DNA, chromosome 8q21, BAC clone 521F14, complete
             sequence
          Length = 116160

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 480   accctagtgagggagttctc 499
             ||||||||||||||||||||
Sbjct: 35355 accctagtgagggagttctc 35374


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,482,248
Number of Sequences: 3902068
Number of extensions: 5482248
Number of successful extensions: 110205
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109962
Number of HSP's gapped (non-prelim): 241
length of query: 623
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 600
effective length of database: 17,143,297,704
effective search space: 10285978622400
effective search space used: 10285978622400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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