>dbj|AB085212.1| Triticum aestivum Tria27 mRNA for 27K protein, partial cds
          Length = 798

 Score =  297 bits (150), Expect = 2e-77
 Identities = 312/366 (85%)
 Strand = Plus / Minus

                                                                       
Query: 283 ggatggcccttgtacgccttgcagacgtaagcttcaaagttctcgtaatcctcgtagagc 342
           |||| |||||||||||||||||||| ||||||||  |||||| ||||||| | |||||||
Sbjct: 548 ggatagcccttgtacgccttgcagatgtaagctttgaagttcccgtaatcgttgtagagc 489

                                                                       
Query: 343 ggctcgccatcaaccaccacccatggaacgtacttgtgcggaggcacaagtgcatcagtc 402
           |||| ||| || |||||||||||||||||| ||| ||| |||||||| ||  || | |||
Sbjct: 488 ggcttgccgtcgaccaccacccatggaacgaactggtgaggaggcacgagctcagctgtc 429

                                                                       
Query: 403 tgtttcccatacttgagcgaaagcttgtggccatgctcactgttgtagcactccatgaca 462
           ||| ||||||||| |||||| || ||||||||| |||| |  |||||||||||| |||| 
Sbjct: 428 tgtctcccatactcgagcgatagattgtggccacgctcgcccttgtagcactccgtgact 369

                                                                       
Query: 463 ggcttggggtcaagcccctgtttctggaagcacgactgccattcctcgcgcttgcggttc 522
           ||||| ||||||||||||||||||||||||||||||| ||| |||  | |||||   |||
Sbjct: 368 ggctttgggtcaagcccctgtttctggaagcacgactcccactcccggtgcttgttcttc 309

                                                                       
Query: 523 atcaccaggtcttccacgcagttgatgaaaccgaaatgcacattcaaatccggccaggcc 582
           | |||||||||   ||||||||  ||||| |||| |||||| ||||  ||||||||||| 
Sbjct: 308 aacaccaggtccgacacgcagtaaatgaagccgagatgcaccttcacgtccggccaggcg 249

                                                                       
Query: 583 tcgatggcgcaagcctccacgttgttcagaaggcattcatcggggccatgctggcaggtg 642
           ||||||||||||||||||||| |||| ||||||||||| |||||||||||||| |||| |
Sbjct: 248 tcgatggcgcaagcctccacggtgttgagaaggcattcctcggggccatgctgacaggag 189

                 
Query: 643 atggtg 648
           ||||||
Sbjct: 188 atggtg 183

>dbj|AK106050.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F01, full
           insert sequence
          Length = 942

 Score =  151 bits (76), Expect = 3e-33
 Identities = 181/216 (83%)
 Strand = Plus / Minus

                                                                       
Query: 255 acggcccagcccttggcaaatcttgggaggatggcccttgtacgccttgcagacgtaagc 314
           |||| ||||||| | ||| | ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 681 acgggccagcccctcgcacaccttgggaggatggcccttgtaggccttgcagatgtaagc 622

                                                                       
Query: 315 ttcaaagttctcgtaatcctcgtagagcggctcgccatcaaccaccacccatggaacgta 374
            || ||||||||||||||||||||||||||||  || || || |||||||| ||||||||
Sbjct: 621 ctcgaagttctcgtaatcctcgtagagcggctgaccgtcgacgaccacccagggaacgta 562

                                                                       
Query: 375 cttgtgcggaggcacaagtgcatcagtctgtttcccatacttgagcgaaagcttgtggcc 434
           |||||| ||||||   |  || ||||||||| | |||||||||||||| |||| ||||||
Sbjct: 561 cttgtggggaggctgcaaagcgtcagtctgtcttccatacttgagcgagagctggtggcc 502

                                               
Query: 435 atgctcactgttgtagcactccatgacaggcttggg 470
             | || |  |||||||| ||  |||||||||||||
Sbjct: 501 gcgttcgcccttgtagcagtcggtgacaggcttggg 466



 Score =  121 bits (61), Expect = 3e-24
 Identities = 112/129 (86%)
 Strand = Plus / Minus

                                                                       
Query: 512 gcttgcggttcatcaccaggtcttccacgcagttgatgaaaccgaaatgcacattcaaat 571
           ||||| |||||| ||||||||| |||||||||| |||||||| |||||||||  ||||||
Sbjct: 424 gcttgtggttcaccaccaggtcctccacgcagtagatgaaacggaaatgcactctcaaat 365

                                                                       
Query: 572 ccggccaggcctcgatggcgcaagcctccacgttgttcagaaggcattcatcggggccat 631
           ||||||| || ||||||||||||||||||||| ||||||| | ||| || |||   ||||
Sbjct: 364 ccggccatgcatcgatggcgcaagcctccacggtgttcaggaagcactcctcgcttccat 305

                    
Query: 632 gctggcagg 640
           |||||||||
Sbjct: 304 gctggcagg 296

>dbj|AK071633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102J23, full
           insert sequence
          Length = 1076

 Score =  151 bits (76), Expect = 3e-33
 Identities = 181/216 (83%)
 Strand = Plus / Minus

                                                                       
Query: 255 acggcccagcccttggcaaatcttgggaggatggcccttgtacgccttgcagacgtaagc 314
           |||| ||||||| | ||| | ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 762 acgggccagcccctcgcacaccttgggaggatggcccttgtaggccttgcagatgtaagc 703

                                                                       
Query: 315 ttcaaagttctcgtaatcctcgtagagcggctcgccatcaaccaccacccatggaacgta 374
            || ||||||||||||||||||||||||||||  || || || |||||||| ||||||||
Sbjct: 702 ctcgaagttctcgtaatcctcgtagagcggctgaccgtcgacgaccacccagggaacgta 643

                                                                       
Query: 375 cttgtgcggaggcacaagtgcatcagtctgtttcccatacttgagcgaaagcttgtggcc 434
           |||||| ||||||   |  || ||||||||| | |||||||||||||| |||| ||||||
Sbjct: 642 cttgtggggaggctgcaaagcgtcagtctgtcttccatacttgagcgagagctggtggcc 583

                                               
Query: 435 atgctcactgttgtagcactccatgacaggcttggg 470
             | || |  |||||||| ||  |||||||||||||
Sbjct: 582 gcgttcgcccttgtagcagtcggtgacaggcttggg 547



 Score =  143 bits (72), Expect = 8e-31
 Identities = 129/148 (87%)
 Strand = Plus / Minus

                                                                       
Query: 512 gcttgcggttcatcaccaggtcttccacgcagttgatgaaaccgaaatgcacattcaaat 571
           ||||| |||||| ||||||||| |||||||||| |||||||| |||||||||  ||||||
Sbjct: 505 gcttgtggttcaccaccaggtcctccacgcagtagatgaaacggaaatgcactctcaaat 446

                                                                       
Query: 572 ccggccaggcctcgatggcgcaagcctccacgttgttcagaaggcattcatcggggccat 631
           ||||||| || ||||||||||||||||||||| ||||||| | ||| || |||   ||||
Sbjct: 445 ccggccatgcatcgatggcgcaagcctccacggtgttcaggaagcactcctcgcttccat 386

                                       
Query: 632 gctggcaggtgatggtgttgttggcgcc 659
           ||||||| | ||||||||||||||||||
Sbjct: 385 gctggcaagagatggtgttgttggcgcc 358

>dbj|AK068091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131A15, full
           insert sequence
          Length = 1161

 Score =  129 bits (65), Expect = 1e-26
 Identities = 116/133 (87%)
 Strand = Plus / Minus

                                                                       
Query: 255 acggcccagcccttggcaaatcttgggaggatggcccttgtacgccttgcagacgtaagc 314
           |||| ||||||| | ||| | ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 874 acgggccagcccctcgcacaccttgggaggatggcccttgtaggccttgcagaagtaagc 815

                                                                       
Query: 315 ttcaaagttctcgtaatcctcgtagagcggctcgccatcaaccaccacccatggaacgta 374
            || |||||||||||||||||||||||||| |  || || || |||||||| ||||||||
Sbjct: 814 ctcgaagttctcgtaatcctcgtagagcggatgaccgtcgacgaccacccaaggaacgta 755

                        
Query: 375 cttgtgcggaggc 387
           |||||| ||||||
Sbjct: 754 cttgtggggaggc 742



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                       
Query: 573 cggccaggcctcgatggcgcaagcctccacgttgttcagaaggcattcatcggggccatg 632
           |||||| || ||||||||||||||||||||| ||||||| | ||| || |||   |||||
Sbjct: 449 cggccatgcatcgatggcgcaagcctccacggtgttcaggaagcactcctcgcttccatg 390

                                   
Query: 633 ctggcaggtgatggtgttgttggc 656
           |||||| | |||||||||||||||
Sbjct: 389 ctggcaagagatggtgttgttggc 366

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                            
Query: 255      acggcccagcccttggcaaatcttgggaggatggcccttgtacgccttgcagacgtaagc 314
                |||| ||||||| | ||| | ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 10327972 acgggccagcccctcgcacaccttgggaggatggcccttgtaggccttgcagatgtaagc 10328031

                                    
Query: 315      ttcaaagttctcgtaatcct 334
                 || ||||||||||||||||
Sbjct: 10328032 ctcgaagttctcgtaatcct 10328051



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 567      caaatccggccaggcctcgatggcgcaagcctccacgttgttcag 611
                |||||||||||| || ||||||||||||||||||||| |||||||
Sbjct: 10328727 caaatccggccatgcatcgatggcgcaagcctccacggtgttcag 10328771



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 80/96 (83%)
 Strand = Plus / Plus

                                                                            
Query: 332      cctcgtagagcggctcgccatcaaccaccacccatggaacgtacttgtgcggaggcacaa 391
                |||||||||||||||  || || || |||||||| |||||||||||||| ||||||   |
Sbjct: 10328206 cctcgtagagcggctgaccgtcgacgaccacccagggaacgtacttgtggggaggctgca 10328265

                                                    
Query: 392      gtgcatcagtctgtttcccatacttgagcgaaagct 427
                  || ||||||||| | |||||||||||||| ||||
Sbjct: 10328266 aagcgtcagtctgtcttccatacttgagcgagagct 10328301

>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone
             OSJNBb0036D03, from chromosome 3, complete sequence
          Length = 125800

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                         
Query: 255   acggcccagcccttggcaaatcttgggaggatggcccttgtacgccttgcagacgtaagc 314
             |||| ||||||| | ||| | ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 41438 acgggccagcccctcgcacaccttgggaggatggcccttgtaggccttgcagatgtaagc 41497

                                 
Query: 315   ttcaaagttctcgtaatcct 334
              || ||||||||||||||||
Sbjct: 41498 ctcgaagttctcgtaatcct 41517



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                          
Query: 567   caaatccggccaggcctcgatggcgcaagcctccacgttgttcag 611
             |||||||||||| || ||||||||||||||||||||| |||||||
Sbjct: 42193 caaatccggccatgcatcgatggcgcaagcctccacggtgttcag 42237



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 80/96 (83%)
 Strand = Plus / Plus

                                                                         
Query: 332   cctcgtagagcggctcgccatcaaccaccacccatggaacgtacttgtgcggaggcacaa 391
             |||||||||||||||  || || || |||||||| |||||||||||||| ||||||   |
Sbjct: 41672 cctcgtagagcggctgaccgtcgacgaccacccagggaacgtacttgtggggaggctgca 41731

                                                 
Query: 392   gtgcatcagtctgtttcccatacttgagcgaaagct 427
               || ||||||||| | |||||||||||||| ||||
Sbjct: 41732 aagcgtcagtctgtcttccatacttgagcgagagct 41767

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                            
Query: 255      acggcccagcccttggcaaatcttgggaggatggcccttgtacgccttgcagacgtaagc 314
                |||| ||||||| | ||| | ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 10326073 acgggccagcccctcgcacaccttgggaggatggcccttgtaggccttgcagatgtaagc 10326132

                                    
Query: 315      ttcaaagttctcgtaatcct 334
                 || ||||||||||||||||
Sbjct: 10326133 ctcgaagttctcgtaatcct 10326152



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 567      caaatccggccaggcctcgatggcgcaagcctccacgttgttcag 611
                |||||||||||| || ||||||||||||||||||||| |||||||
Sbjct: 10326828 caaatccggccatgcatcgatggcgcaagcctccacggtgttcag 10326872



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 80/96 (83%)
 Strand = Plus / Plus

                                                                            
Query: 332      cctcgtagagcggctcgccatcaaccaccacccatggaacgtacttgtgcggaggcacaa 391
                |||||||||||||||  || || || |||||||| |||||||||||||| ||||||   |
Sbjct: 10326307 cctcgtagagcggctgaccgtcgacgaccacccagggaacgtacttgtggggaggctgca 10326366

                                                    
Query: 392      gtgcatcagtctgtttcccatacttgagcgaaagct 427
                  || ||||||||| | |||||||||||||| ||||
Sbjct: 10326367 aagcgtcagtctgtcttccatacttgagcgagagct 10326402

>gb|AE011932.1| Xanthomonas axonopodis pv. citri str. 306,  section 310 of 469 of the
            complete genome
          Length = 12264

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 219  gcctacctccaccacctgttg 239
            |||||||||||||||||||||
Sbjct: 4455 gcctacctccaccacctgttg 4435

>gb|AF443077.1| HIV-1 isolate 98BWMC13.4 from Botswana, complete genome
          Length = 9079

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 470  ggtcaagcccctgtttctgga 490
            |||||||||||||||||||||
Sbjct: 2901 ggtcaagcccctgtttctgga 2881

>emb|AL805919.10| Mouse DNA sequence from clone RP23-395M3 on chromosome 4, complete
             sequence
          Length = 199130

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 415   ttgagcgaaagcttgtggccatgct 439
             |||||| ||||||||||||||||||
Sbjct: 26339 ttgagctaaagcttgtggccatgct 26315

>ref|XM_629861.1| Dictyostelium discoideum hypothetical protein (DDB0184259), partial
           mRNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 ggtgatggtgttgttggcgc 658
           ||||||||||||||||||||
Sbjct: 440 ggtgatggtgttgttggcgc 421

>gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, complete sequence
          Length = 274518

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    gacatacaatttatcaattg 150
              ||||||||||||||||||||
Sbjct: 114446 gacatacaatttatcaattg 114465

>gb|AC165959.5| Mus musculus BAC clone RP23-390B24 from chromosome 7, complete sequence
          Length = 217760

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 449    agcactccatgacaggcttg 468
              ||||||||||||||||||||
Sbjct: 199808 agcactccatgacaggcttg 199789

>gb|AC140235.3| Mus musculus BAC clone RP24-272D15 from chromosome 7, complete sequence
          Length = 185617

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    agcactccatgacaggcttg 468
              ||||||||||||||||||||
Sbjct: 169236 agcactccatgacaggcttg 169255

>gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosome 8, complete sequence
          Length = 187246

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    gacatacaatttatcaattg 150
              ||||||||||||||||||||
Sbjct: 123751 gacatacaatttatcaattg 123770

>emb|AJ400878.1|MMU400878 Mus musculus Ascl3 gene, Cegp1 gene, D7H11orf14 gene, D7H11orf15
            gene, D7H11orf16 gene and C11orf17 gene
          Length = 234169

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 449  agcactccatgacaggcttg 468
            ||||||||||||||||||||
Sbjct: 9847 agcactccatgacaggcttg 9866

>gb|AC093114.2| Homo sapiens chromosome 3 clone RP11-339O5, complete sequence
          Length = 167241

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    aagatgaaactgtcctatgt 98
             ||||||||||||||||||||
Sbjct: 50828 aagatgaaactgtcctatgt 50809

>gb|AC092393.3| Homo sapiens chromosome 1 clone RP4-736I12, complete sequence
          Length = 90526

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    aattaacctgaacagaaaga 82
             ||||||||||||||||||||
Sbjct: 10581 aattaacctgaacagaaaga 10600

>gb|AC008413.7| Homo sapiens chromosome 5 clone CTC-281M20, complete sequence
          Length = 143200

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 629  catgctggcaggtgatggtg 648
            ||||||||||||||||||||
Sbjct: 3018 catgctggcaggtgatggtg 3037

>gb|AC027316.3|AC027316 Homo sapiens chromosome 5 clone CTC-304C4, complete sequence
          Length = 112361

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 629   catgctggcaggtgatggtg 648
             ||||||||||||||||||||
Sbjct: 45838 catgctggcaggtgatggtg 45857

>gb|U39043.1|PHU39043 Pasteurella haemolytica UDP-galactose 4-epimerase (galE) gene,
            complete cds
          Length = 3269

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 347  cgccatcaaccaccacccat 366
            ||||||||||||||||||||
Sbjct: 1416 cgccatcaaccaccacccat 1397

>gb|AC155338.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH138P04, complete sequence
          Length = 137697

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 349   ccatcaaccaccacccatggaacgtact 376
             ||||||||||| ||||| ||||||||||
Sbjct: 19417 ccatcaaccactacccaaggaacgtact 19390


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,741,260
Number of Sequences: 3902068
Number of extensions: 4741260
Number of successful extensions: 81492
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81391
Number of HSP's gapped (non-prelim): 93
length of query: 659
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 636
effective length of database: 17,143,297,704
effective search space: 10903137339744
effective search space used: 10903137339744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)