ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags14f13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475487.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1191 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 526 gtgccagtgcccacactgatgagagcaattcatttggtttatccagctgctccaaaattg 585 ||||||||||||| || |||||||||| |||||| ||||| |||| ||||||||||||| Sbjct: 1036 gtgccagtgcccatacggatgagagcacttcattgggtttgtccaactgctccaaaattt 977 Query: 586 tgtaatctccattcgctgcatacttgaag 614 || | ||||| || |||| ||||||||| Sbjct: 976 tgaagtctccttttgctgagtacttgaag 948 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 365 ctaaattttactgggaatcttgtgtccaaggaaagcctccaaatcacttatagatttcaa 424 ||||||||| ||||||||| ||| || |||||| ||||| | ||| ||||||||||||| Sbjct: 1191 ctaaattttgctgggaatcctgtctctaaggaatgcctctatatcttttatagatttcaa 1132 Query: 425 accttct 431 ||||||| Sbjct: 1131 accttct 1125
>dbj|AK100622.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108G08, full insert sequence Length = 2535 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 526 gtgccagtgcccacactgatgagagcaattcatttggtttatccagctgctccaaaattg 585 ||||||||||||| || |||||||||| |||||| ||||| |||| ||||||||||||| Sbjct: 2161 gtgccagtgcccatacggatgagagcacttcattgggtttgtccaactgctccaaaattt 2102 Query: 586 tgtaatctccattcgctgcatacttgaag 614 || | ||||| || |||| ||||||||| Sbjct: 2101 tgaagtctccttttgctgagtacttgaag 2073 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 352 gaaacaatcccacctaaattttactgggaatcttgtgtccaaggaaagcctccaaatcac 411 |||||| ||||| ||||||||| ||||||||| ||| || |||||| ||||| | ||| Sbjct: 2329 gaaacattcccatctaaattttgctgggaatcctgtctctaaggaatgcctctatatctt 2270 Query: 412 ttatagatttcaaaccttct 431 |||||||||||||||||||| Sbjct: 2269 ttatagatttcaaaccttct 2250
>dbj|AK060635.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-B11, full insert sequence Length = 1695 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 526 gtgccagtgcccacactgatgagagcaattcatttggtttatccagctgctccaaaattg 585 ||||||||||||| || |||||||||| |||||| ||||| |||| ||||||||||||| Sbjct: 1343 gtgccagtgcccatacggatgagagcacttcattgggtttgtccaactgctccaaaattt 1284 Query: 586 tgtaatctccattcgctgcatacttgaag 614 || | ||||| || |||| ||||||||| Sbjct: 1283 tgaagtctccttttgctgagtacttgaag 1255 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 352 gaaacaatcccacctaaattttactgggaatcttgtgtccaaggaaagcctccaaatcac 411 |||||| ||||| ||||||||| ||||||||| ||| || |||||| ||||| | ||| Sbjct: 1511 gaaacattcccatctaaattttgctgggaatcctgtctctaaggaatgcctctatatctt 1452 Query: 412 ttatagatttcaaaccttct 431 |||||||||||||||||||| Sbjct: 1451 ttatagatttcaaaccttct 1432
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 352 gaaacaatcccacctaaattttactgggaatcttgtgtccaaggaaagcctccaaatcac 411 |||||| ||||| ||||||||| ||||||||| ||| || |||||| ||||| | ||| Sbjct: 24494 gaaacattcccatctaaattttgctgggaatcctgtctctaaggaatgcctctatatctt 24553 Query: 412 ttatagatttcaaaccttct 431 |||||||||||||||||||| Sbjct: 24554 ttatagatttcaaaccttct 24573 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 526 gtgccagtgcccacactgatgagagcaattcatttggtttatccagctgctccaaaatt 584 ||||||||||||| || |||||||||| |||||| ||||| |||| ||||||||||||| Sbjct: 24662 gtgccagtgcccatacggatgagagcacttcattgggtttgtccaactgctccaaaatt 24720
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 352 gaaacaatcccacctaaattttactgggaatcttgtgtccaaggaaagcctccaaatcac 411 |||||| ||||| ||||||||| ||||||||| ||| || |||||| ||||| | ||| Sbjct: 24338704 gaaacattcccatctaaattttgctgggaatcctgtctctaaggaatgcctctatatctt 24338763 Query: 412 ttatagatttcaaaccttct 431 |||||||||||||||||||| Sbjct: 24338764 ttatagatttcaaaccttct 24338783 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 526 gtgccagtgcccacactgatgagagcaattcatttggtttatccagctgctccaaaatt 584 ||||||||||||| || |||||||||| |||||| ||||| |||| ||||||||||||| Sbjct: 24338872 gtgccagtgcccatacggatgagagcacttcattgggtttgtccaactgctccaaaatt 24338930
>ref|XM_640046.1| Dictyostelium discoideum developmental protein (DDB0220129), partial mRNA Length = 1383 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 505 atgggagtgatgatggtgcttgt 527 ||||||||||||||||||||||| Sbjct: 1054 atgggagtgatgatggtgcttgt 1032
>gb|AC116920.3| Dictyostelium discoideum chromosome 2 map 4415041-4520361 strain AX4, complete sequence Length = 105320 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 505 atgggagtgatgatggtgcttgt 527 ||||||||||||||||||||||| Sbjct: 24884 atgggagtgatgatggtgcttgt 24906
>gb|AF081800.1|AF081800 Dictyostelium discoideum developmental protein DG1074 (DG1074) gene, partial cds Length = 905 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 505 atgggagtgatgatggtgcttgt 527 ||||||||||||||||||||||| Sbjct: 725 atgggagtgatgatggtgcttgt 703
>gb|AY101355.1| Opisthonecta matiensis actin II gene, partial cds Length = 1105 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 atagcagaggttttccttaata 44 |||||||||||||||||||||| Sbjct: 615 atagcagaggttttccttaata 594
>gb|AY844991.1| Epulopiscium sp. N.l._2_clone_38 16S ribosomal RNA (rrn) gene, partial sequence Length = 1433 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 tttcctctcctgcactccggc 312 ||||||||||||||||||||| Sbjct: 608 tttcctctcctgcactccggc 588
>gb|AC164536.5| Mus musculus chromosome 18, clone RP23-425H1, complete sequence Length = 188835 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 tgtatcttttggaaaataaac 191 ||||||||||||||||||||| Sbjct: 93191 tgtatcttttggaaaataaac 93171
>emb|AL590427.15| Human DNA sequence from clone RP11-396N10 on chromosome 1 Contains the 5' end of the NTNG1 gene for netrin G1 and a CpG island, complete sequence Length = 160135 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 tgatttcctctcctgcactcc 309 ||||||||||||||||||||| Sbjct: 51338 tgatttcctctcctgcactcc 51358
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 ttcttcccaggggggctgctg 500 ||||||||||||||||||||| Sbjct: 261642 ttcttcccaggggggctgctg 261662
>gb|AC093193.11| Homo sapiens Xp BAC RP11-607K23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 83001 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 taaactgtgcattcatcaaca 207 ||||||||||||||||||||| Sbjct: 13003 taaactgtgcattcatcaaca 12983
>ref|NM_001036789.1| Arabidopsis thaliana unknown protein AT5G10320 transcript variant AT5G10320.3 mRNA, complete cds Length = 1570 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 tgatgagagcaattcatttg 561 |||||||||||||||||||| Sbjct: 893 tgatgagagcaattcatttg 912
>ref|NM_121070.3| Arabidopsis thaliana unknown protein AT5G10320 transcript variant AT5G10320.1 mRNA, complete cds Length = 1518 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 tgatgagagcaattcatttg 561 |||||||||||||||||||| Sbjct: 896 tgatgagagcaattcatttg 915
>ref|NM_001036788.1| Arabidopsis thaliana unknown protein AT5G10320 transcript variant AT5G10320.2 mRNA, complete cds Length = 1516 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 tgatgagagcaattcatttg 561 |||||||||||||||||||| Sbjct: 894 tgatgagagcaattcatttg 913
>ref|NM_115224.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT3G53640 mRNA, complete cds Length = 1929 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 gtgatgatggtgcttgtgcc 530 |||||||||||||||||||| Sbjct: 108 gtgatgatggtgcttgtgcc 89
>gb|BC079718.1| Xenopus laevis MGC81105 protein, mRNA (cDNA clone MGC:82153 IMAGE:7012450), complete cds Length = 2523 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 aggggggctgctgagaaatgggag 511 ||||||||||||| |||||||||| Sbjct: 6 aggggggctgctgggaaatgggag 29
>ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome region (PWSAS@) on chromosome 15 Length = 755217 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 ttggtttatccagctgctcc 578 |||||||||||||||||||| Sbjct: 354035 ttggtttatccagctgctcc 354054
>gb|BT011749.1| Arabidopsis thaliana At5g10320 gene, complete cds Length = 1209 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 tgatgagagcaattcatttg 561 |||||||||||||||||||| Sbjct: 776 tgatgagagcaattcatttg 795
>gb|AC116326.5| Mus musculus BAC clone RP24-64C6 from chromosome 7, complete sequence Length = 181548 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 actgatgagagcaattcatt 559 |||||||||||||||||||| Sbjct: 2578 actgatgagagcaattcatt 2559
>gb|AC121806.3| Mus musculus BAC clone RP23-448L10 from chromosome 7, complete sequence Length = 182011 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 tttggaaaataaactgtgca 197 |||||||||||||||||||| Sbjct: 42886 tttggaaaataaactgtgca 42905
>gb|AC146805.17| Medicago truncatula clone mth2-12n20, complete sequence Length = 44109 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 agatgtgtcaactttctgaa 107 |||||||||||||||||||| Sbjct: 20962 agatgtgtcaactttctgaa 20981
>emb|AL691458.7| Human DNA sequence from clone RP11-13F15 on chromosome 10, complete sequence Length = 69133 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 aacaatcccacctaaatttt 373 |||||||||||||||||||| Sbjct: 11989 aacaatcccacctaaatttt 11970
>emb|AL137003.12| Human DNA sequence from clone RP1-151F17 on chromosome 6 Contains the 3' end of the SCA1 gene for spinocerebellar ataxia 1n(olivopontocerebellar ataxia 1, autosomal dominant, ataxin 1), complete sequence Length = 113802 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gatttcctctcctgcactcc 309 |||||||||||||||||||| Sbjct: 78559 gatttcctctcctgcactcc 78540
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 agtgatgatggtgcttgtgc 529 |||||||||||||||||||| Sbjct: 2904 agtgatgatggtgcttgtgc 2923
>emb|AL360334.1|ATF18D22 Arabidopsis thaliana DNA chromosome 5, BAC clone F18D22 (ESSA project) Length = 57180 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 tgatgagagcaattcatttg 561 |||||||||||||||||||| Sbjct: 49832 tgatgagagcaattcatttg 49813
>gb|AC124303.5| Homo sapiens chromosome 15, clone RP11-145P16, complete sequence Length = 160535 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 ttggtttatccagctgctcc 578 |||||||||||||||||||| Sbjct: 124224 ttggtttatccagctgctcc 124205
>emb|CR383661.10| Zebrafish DNA sequence from clone DKEY-44L21 in linkage group 20 Contains the gene for a novel protein similar to mouse and human O-acyltransferase (membrane bound) domain containing 2 (OACT2), the 5' end of the gene for a novel protein similar to rat kinase D-interacting substance of 220 kDa (RGD:619949) and a CpG island, complete sequence Length = 116874 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 actttcagttagcaagcctg 263 |||||||||||||||||||| Sbjct: 2328 actttcagttagcaagcctg 2309
>gb|AC093013.14| Homo sapiens 12 BAC RP11-158O15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161114 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 aattcatttggtttatccag 571 |||||||||||||||||||| Sbjct: 71560 aattcatttggtttatccag 71579
>gb|AC104658.6| Homo sapiens BAC clone RP11-593M6 from 4, complete sequence Length = 140028 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tcttttggaaaataaactgt 194 |||||||||||||||||||| Sbjct: 49631 tcttttggaaaataaactgt 49612
>gb|AC091784.8| Genomic sequence for Mus musculus, clone RP23-213D23, complete sequence Length = 215410 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 atgtatcttttggaaaataa 189 |||||||||||||||||||| Sbjct: 55289 atgtatcttttggaaaataa 55308
>gb|AF250841.1|AF250841 Homo sapiens PAC clones A17157 and P0950 imprinted HBII-85 and HBII-52 small nucleolar RNA genes, complete sequence Length = 228017 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 ttggtttatccagctgctcc 578 |||||||||||||||||||| Sbjct: 47271 ttggtttatccagctgctcc 47290
>emb|BX005480.12| Mouse DNA sequence from clone RP23-142M12 on chromosome X, complete sequence Length = 196326 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 atgtatcttttggaaaataa 189 |||||||||||||||||||| Sbjct: 21830 atgtatcttttggaaaataa 21811
>gb|AC151837.4| Mus musculus BAC clone RP23-330A14 from chromosome 7, complete sequence Length = 209661 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 actgatgagagcaattcatt 559 |||||||||||||||||||| Sbjct: 52152 actgatgagagcaattcatt 52133
>dbj|AB056170.1| Uncultured rumen bacterium gene for 16S ribosomal RNA, clone:9(ER) Length = 671 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 tttcctctcctgcactccggcatg 315 |||||||||||||||||| ||||| Sbjct: 575 tttcctctcctgcactccagcatg 552
>emb|BX832119.1|CNS0A23Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH52ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1374 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 tgatgagagcaattcatttg 561 |||||||||||||||||||| Sbjct: 784 tgatgagagcaattcatttg 803
>emb|BX830334.1|CNS0A1RU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1396 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 tgatgagagcaattcatttg 561 |||||||||||||||||||| Sbjct: 783 tgatgagagcaattcatttg 802
>emb|BX830313.1|CNS0A1JS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB72ZC06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1361 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 tgatgagagcaattcatttg 561 |||||||||||||||||||| Sbjct: 684 tgatgagagcaattcatttg 703
>gb|AC104689.4| Homo sapiens BAC clone RP11-158O16 from 4, complete sequence Length = 161428 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 aattcatttggtttatccag 571 |||||||||||||||||||| Sbjct: 89556 aattcatttggtttatccag 89537
>dbj|AB196513.1| Paralichthys olivaceus COL1A1 mRNA for type 1 collagen alpha 1, complete cds Length = 5117 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 472 cctctccgttcttcccaggggggc 495 ||||||||||||| |||||||||| Sbjct: 804 cctctccgttctttccaggggggc 781
>dbj|AK176186.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL23-05-H06 Length = 1471 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 tgatgagagcaattcatttg 561 |||||||||||||||||||| Sbjct: 894 tgatgagagcaattcatttg 913
>gb|AC154543.2| Mus musculus BAC clone RP23-228E21 from 12, complete sequence Length = 197876 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 ttggaaaataaactgtgcattcat 202 |||||||||||| ||||||||||| Sbjct: 45389 ttggaaaataaaatgtgcattcat 45366
>emb|CT010578.16| Mouse DNA sequence from clone RP23-268O1 on chromosome 12, complete sequence Length = 180650 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 ttggaaaataaactgtgcattcat 202 |||||||||||| ||||||||||| Sbjct: 51580 ttggaaaataaaatgtgcattcat 51557
>emb|AL137786.3|CNS01DWO Human chromosome 14 DNA sequence BAC R-433J8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 197689 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 ctgagaaatgggagtgatga 517 |||||||||||||||||||| Sbjct: 57478 ctgagaaatgggagtgatga 57459
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 gtgatgatggtgcttgtgcc 530 |||||||||||||||||||| Sbjct: 129498 gtgatgatggtgcttgtgcc 129517
>gb|AF027390.1|AF027390 Homo sapiens 7q telomere, complete sequence Length = 225432 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tgtatcttttggaaaataaa 190 |||||||||||||||||||| Sbjct: 155550 tgtatcttttggaaaataaa 155569
>gb|AC002112.1|AC002112 Genomic sequence from Human 6, complete sequence Length = 115967 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gatttcctctcctgcactcc 309 |||||||||||||||||||| Sbjct: 62644 gatttcctctcctgcactcc 62663
>emb|AL670544.7| Mouse DNA sequence from clone RP23-16G8 on chromosome X, complete sequence Length = 236946 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tatcttttggaaaataaact 192 |||||||||||||||||||| Sbjct: 63152 tatcttttggaaaataaact 63171
>gb|AY552850.1| Meleagris gallopavo clone MNT-278 microsatellite sequence Length = 1348 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 atgtgtcaactttctgaaat 109 |||||||||||||||||||| Sbjct: 629 atgtgtcaactttctgaaat 648 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,931,673 Number of Sequences: 3902068 Number of extensions: 5931673 Number of successful extensions: 112683 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112531 Number of HSP's gapped (non-prelim): 152 length of query: 614 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 591 effective length of database: 17,143,297,704 effective search space: 10131688943064 effective search space used: 10131688943064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
