ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY130254.1| Thermus thermophilus strain AT-62 putative sugar ... 64 5e-07
2emb|Y16753.3|TTBETAGLY Thermus thermophilus b-gly gene and parti... 64 5e-07
3gb|AF322365.1| Thermus caldophilus beta-glycosidase gene, comple... 64 5e-07
4gb|AY130256.1| Thermus filiformis strain Wai33 A1 beta-glycosida... 64 5e-07
5gb|AY130255.1| Thermus thermophilus strain HB8 beta-glycosidase ... 64 5e-07
6dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, comp... 64 5e-07
7gb|AF135400.2|AF135400 Thermus thermophilus strain TH125 beta-gl... 64 5e-07
8gb|AY130258.1| Thermus sp. IB-21 clone tib10 beta-glycosidase ge... 64 5e-07
9gb|AY130257.1| Thermus sp. IB-21 clone tib2 beta-glycosidase gen... 64 5e-07
10gb|AF225213.1|AF225213 Thermus nonproteolyticus beta-glycosidase... 64 5e-07
11gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete... 64 5e-07
12dbj|AB034947.1| Thermus sp. Z-1 gene for beta-glucosidase, compl... 64 5e-07
13ref|XM_473159.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
14emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4,... 62 2e-06
15emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4,... 62 2e-06
16dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
17ref|XM_473160.1| Oryza sativa (japonica cultivar-group), predic... 58 3e-05
18dbj|AK068772.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
19gb|AY528410.1| Synthetic construct thermostable beta-glucosidase... 56 1e-04
20dbj|AK066850.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
21emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 48 0.032
22emb|CR361541.11| Zebrafish DNA sequence from clone DKEY-99G10 in... 44 0.49
23dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
24dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
25gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
26ref|XM_788028.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.0
27emb|AL049575.7|HSDJ316D7 Human DNA sequence from clone RP1-316D7... 42 2.0
28gb|CP000088.1| Thermobifida fusca YX, complete genome 42 2.0
29gb|AC035138.9| Homo sapiens chromosome 10 clone RP11-314D6, comp... 42 2.0
30gb|AF086819.2|AF086819 Thermobifida fusca SbpA (sbpA) gene, part... 42 2.0
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
32gb|AC132487.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
33gb|AC165963.4| Mus musculus BAC clone RP23-338N22 from chromosom... 40 7.7
34gb|AC160538.8| Mus musculus chromosome 15, clone RP24-156D3, com... 40 7.7
35gb|AC132246.2| Mus musculus BAC clone RP24-421K16 from chromosom... 40 7.7
36gb|AC129221.3| Mus musculus BAC clone RP24-480M20 from chromosom... 40 7.7
37gb|AC141628.2| Mus musculus BAC clone RP24-358E15 from chromosom... 40 7.7
38gb|AC127423.4| Mus musculus BAC clone RP24-487D5 from chromosome... 40 7.7
39gb|AC122924.2| Mus musculus BAC clone RP23-39M16 from 12, comple... 40 7.7
40gb|AC113976.13| Mus musculus chromosome 15, clone RP23-146F23, c... 40 7.7
41emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete ... 40 7.7
42emb|CR376745.11| Zebrafish DNA sequence from clone CH211-147K10 ... 40 7.7
43emb|BX470121.7| Zebrafish DNA sequence from clone DKEY-267G17 in... 40 7.7
44gb|AC020630.21| Homo sapiens 3 BAC RP11-197N19 (Roswell Park Can... 40 7.7
45gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 7.7
46dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.7
47gb|AC133647.3| Mus musculus BAC clone RP23-287D22 from chromosom... 40 7.7
48emb|BX088724.6| Zebrafish DNA sequence from clone DKEY-15G22, co... 40 7.7
49emb|Z29625.1|SSBGL3GE Streptomyces sp. QM-B814 (ATCC 11238) bgl3... 40 7.7
50dbj|AB073638.2| Neotermes koshunensis NkBG mRNA for beta-glucosi... 40 7.7
51gb|AC110160.10| Mus musculus chromosome 1, clone RP23-66A20, com... 40 7.7
52gb|AC149056.6| Mus musculus BAC clone RP23-344G11 from chromosom... 40 7.7
53gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome 40 7.7
54emb|AL935182.13| Zebrafish DNA sequence from clone CH211-121I12,... 40 7.7
55gb|AC149279.3| Mus musculus BAC clone RP24-89F23 from 7, complet... 40 7.7
56emb|CR388402.15| Zebrafish DNA sequence from clone DKEY-97I21 in... 40 7.7
57gb|AC149869.2| Mus musculus BAC clone RP23-3E12 from 7, complete... 40 7.7
58gb|AC149087.4| Mus musculus BAC clone RP23-240E3 from 18, comple... 40 7.7
59gb|AC147029.3| Mus musculus BAC clone RP23-239P5 from 12, comple... 40 7.7
60emb|AL844559.14| Zebrafish DNA sequence from clone DKEY-14K1, co... 40 7.7
61emb|AL714021.12| Mouse DNA sequence from clone RP23-305F20 on ch... 40 7.7 
>gb|AY130254.1| Thermus thermophilus strain AT-62 putative sugar permease and
            beta-glycosidase genes, complete cds
          Length = 3997

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 407  cccactcgaagttgtccatgaggctccacacgaagtagcc 446
            ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 2799 cccactcaaagttgtccatgaggctccagacgaagtagcc 2760
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>emb|Y16753.3|TTBETAGLY Thermus thermophilus b-gly gene and partial gene for sugar permease
          Length = 1950

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 407  cccactcgaagttgtccatgaggctccacacgaagtagcc 446
            ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1712 cccactcaaagttgtccatgaggctccagacgaagtagcc 1673
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>gb|AF322365.1| Thermus caldophilus beta-glycosidase gene, complete cds
          Length = 2177

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 407  cccactcgaagttgtccatgaggctccacacgaagtagcc 446
            ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1566 cccactcaaagttgtccatgaggctccagacgaagtagcc 1527
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>gb|AY130256.1| Thermus filiformis strain Wai33 A1 beta-glycosidase gene, complete
            cds
          Length = 1738

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 407  cccactcgaagttgtccatgaggctccacacgaagtagcc 446
            ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1472 cccactcaaagttgtccatgaggctccagacgaagtagcc 1433
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>gb|AY130255.1| Thermus thermophilus strain HB8 beta-glycosidase gene, complete cds
          Length = 1933

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 407  cccactcgaagttgtccatgaggctccacacgaagtagcc 446
            ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1700 cccactcaaagttgtccatgaggctccagacgaagtagcc 1661
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>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence
          Length = 256992

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 407   cccactcgaagttgtccatgaggctccacacgaagtagcc 446
             ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 78500 cccactcaaagttgtccatgaggctccagacgaagtagcc 78461
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>gb|AF135400.2|AF135400 Thermus thermophilus strain TH125 beta-glycosidase (bglT) gene,
            complete cds
          Length = 2506

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 407  cccactcgaagttgtccatgaggctccacacgaagtagcc 446
            ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1566 cccactcaaagttgtccatgaggctccagacgaagtagcc 1527
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>gb|AY130258.1| Thermus sp. IB-21 clone tib10 beta-glycosidase gene, complete cds
          Length = 1805

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 407  cccactcgaagttgtccatgaggctccacacgaagtagcc 446
            ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1519 cccactcaaagttgtccatgaggctccagacgaagtagcc 1480
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>gb|AY130257.1| Thermus sp. IB-21 clone tib2 beta-glycosidase gene, complete cds
          Length = 1634

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 407  cccactcgaagttgtccatgaggctccacacgaagtagcc 446
            ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1490 cccactcaaagttgtccatgaggctccagacgaagtagcc 1451
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>gb|AF225213.1|AF225213 Thermus nonproteolyticus beta-glycosidase gene, complete cds
          Length = 2623

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 407  cccactcgaagttgtccatgaggctccacacgaagtagcc 446
            ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1368 cccactcaaagttgtccatgaggctccagacgaagtagcc 1329
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>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence
          Length = 232605

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 407   cccactcgaagttgtccatgaggctccacacgaagtagcc 446
             ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 39492 cccactcaaagttgtccatgaggctccagacgaagtagcc 39453
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>dbj|AB034947.1| Thermus sp. Z-1 gene for beta-glucosidase, complete cds
          Length = 2028

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 407  cccactcgaagttgtccatgaggctccacacgaagtagcc 446
            ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1701 cccactcaaagttgtccatgaggctccagacgaagtagcc 1662
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>ref|XM_473159.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1083

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                        
Query: 301  gagcccgtgagaaagtctcggtaccacttccccgacatctttggagtcctctcctgcgtt 360
            ||||||||||| || ||||  ||||||||  | |||||||| ||| ||||||||||||| 
Sbjct: 1034 gagcccgtgaggaaatctctataccacttggcagacatcttgggaatcctctcctgcgtg 975

                       
Query: 361  tcaaaatccac 371
            |||||||||||
Sbjct: 974  tcaaaatccac 964



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 494 taaccctgcaggtaattcactcttncaacgtcattgatcaagtcctccat 543
           ||||| |||||||| || || ||| |||||||||||||||| || |||||
Sbjct: 842 taaccttgcaggtagttgaccctttcaacgtcattgatcaaatcttccat 793
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>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16,
            complete sequence
          Length = 130718

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                        
Query: 301  gagcccgtgagaaagtctcggtaccacttccccgacatctttggagtcctctcctgcgtt 360
            ||||||||||| || ||||  ||||||||  | |||||||| ||| ||||||||||||| 
Sbjct: 3338 gagcccgtgaggaaatctctataccacttggcagacatcttgggaatcctctcctgcgtg 3397

                       
Query: 361  tcaaaatccac 371
            |||||||||||
Sbjct: 3398 tcaaaatccac 3408



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 494  taaccctgcaggtaattcactcttncaacgtcattgatcaagtcctccat 543
            ||||| |||||||| || || ||| |||||||||||||||| || |||||
Sbjct: 3656 taaccttgcaggtagttgaccctttcaacgtcattgatcaaatcttccat 3705



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 512   actcttncaacgtcattgatcaagtcctccatactgttatcgctg 556
             |||||| | ||||| ||||||||||| ||||| ||| ||||||||
Sbjct: 19534 actctttcgacgtcgttgatcaagtcttccatgctggtatcgctg 19490
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>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05,
              complete sequence
          Length = 158601

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                          
Query: 301    gagcccgtgagaaagtctcggtaccacttccccgacatctttggagtcctctcctgcgtt 360
              ||||||||||| || ||||  ||||||||  | |||||||| ||| ||||||||||||| 
Sbjct: 109809 gagcccgtgaggaaatctctataccacttggcagacatcttgggaatcctctcctgcgtg 109868

                         
Query: 361    tcaaaatccac 371
              |||||||||||
Sbjct: 109869 tcaaaatccac 109879



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                
Query: 494    taaccctgcaggtaattcactcttncaacgtcattgatcaagtcctccat 543
              ||||| |||||||| || || ||| |||||||||||||||| || |||||
Sbjct: 110127 taaccttgcaggtagttgaccctttcaacgtcattgatcaaatcttccat 110176



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                           
Query: 512    actcttncaacgtcattgatcaagtcctccatactgttatcgctg 556
              |||||| | ||||| ||||||||||| ||||| ||| ||||||||
Sbjct: 126005 actctttcgacgtcgttgatcaagtcttccatgctggtatcgctg 125961
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                            
Query: 301      gagcccgtgagaaagtctcggtaccacttccccgacatctttggagtcctctcctgcgtt 360
                ||||||||||| || ||||  ||||||||  | |||||||| ||| ||||||||||||| 
Sbjct: 25623611 gagcccgtgaggaaatctctataccacttggcagacatcttgggaatcctctcctgcgtg 25623670

                           
Query: 361      tcaaaatccac 371
                |||||||||||
Sbjct: 25623671 tcaaaatccac 25623681



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 494      taaccctgcaggtaattcactcttncaacgtcattgatcaagtcctccat 543
                ||||| |||||||| || || ||| |||||||||||||||| || |||||
Sbjct: 25623929 taaccttgcaggtagttgaccctttcaacgtcattgatcaaatcttccat 25623978



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                             
Query: 512      actcttncaacgtcattgatcaagtcctccatactgttatcgctg 556
                |||||| | ||||| ||||||||||| ||||| ||| ||||||||
Sbjct: 25639807 actctttcgacgtcgttgatcaagtcttccatgctggtatcgctg 25639763
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>ref|XM_473160.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1551

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 200/256 (78%), Gaps = 1/256 (0%)
 Strand = Plus / Minus

                                                                        
Query: 301  gagcccgtgagaaagtctcggtaccacttccccgacatctttggagtcctctcctgcgtt 360
            |||| |||||| || ||||  ||||||||  | |||||| ||||| |||| |||||||| 
Sbjct: 1502 gagctcgtgaggaaatctctataccacttggcagacatccttggaatcctttcctgcgtg 1443

                                                                        
Query: 361  tcaaaatccacgtaatacagcccgaacctcacggtgaagccaaaaccccactcgaagttg 420
            || |||||||| |  |||| ||| ||| | |||||| | ||| || ||||||| || |||
Sbjct: 1442 tcgaaatccacttggtacaacccaaacttgacggtgtaaccataaacccactcaaaattg 1383

                                                                        
Query: 421  tccatgaggctccacacgaagtagccaccgcacgtttgctcctctcctgactgctgaaga 480
            |||| ||    |||| |||||||||| ||  |||||||||||  |||||| |||||||||
Sbjct: 1382 tccacgattgaccacgcgaagtagccccct-acgtttgctcccttcctgattgctgaaga 1324

                                                                        
Query: 481  aatgcacgtcagataaccctgcaggtaattcactcttncaacgtcattgatcaagtcctc 540
             |   || | || ||| | |||| ||| || |||||| | ||||| ||||||||||| ||
Sbjct: 1323 gagatacttgaggtaatcatgcatgtagttgactctttcgacgtcgttgatcaagtcttc 1264

                            
Query: 541  catactgttatcgctg 556
            ||| ||| ||||||||
Sbjct: 1263 catgctggtatcgctg 1248
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>dbj|AK068772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164L07, full
            insert sequence
          Length = 1827

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 200/256 (78%), Gaps = 1/256 (0%)
 Strand = Plus / Minus

                                                                        
Query: 301  gagcccgtgagaaagtctcggtaccacttccccgacatctttggagtcctctcctgcgtt 360
            |||| |||||| || ||||  ||||||||  | |||||| ||||| |||| |||||||| 
Sbjct: 1451 gagctcgtgaggaaatctctataccacttggcagacatccttggaatcctttcctgcgtg 1392

                                                                        
Query: 361  tcaaaatccacgtaatacagcccgaacctcacggtgaagccaaaaccccactcgaagttg 420
            || |||||||| |  |||| ||| ||| | |||||| | ||| || ||||||| || |||
Sbjct: 1391 tcgaaatccacttggtacaacccaaacttgacggtgtaaccataaacccactcaaaattg 1332

                                                                        
Query: 421  tccatgaggctccacacgaagtagccaccgcacgtttgctcctctcctgactgctgaaga 480
            |||| ||    |||| |||||||||| ||  |||||||||||  |||||| |||||||||
Sbjct: 1331 tccacgattgaccacgcgaagtagccccct-acgtttgctcccttcctgattgctgaaga 1273

                                                                        
Query: 481  aatgcacgtcagataaccctgcaggtaattcactcttncaacgtcattgatcaagtcctc 540
             |   || | || ||| | |||| ||| || |||||| | ||||| ||||||||||| ||
Sbjct: 1272 gagatacttgaggtaatcatgcatgtagttgactctttcgacgtcgttgatcaagtcttc 1213

                            
Query: 541  catactgttatcgctg 556
            ||| ||| ||||||||
Sbjct: 1212 catgctggtatcgctg 1197
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>gb|AY528410.1| Synthetic construct thermostable beta-glucosidase (BglA) gene,
            complete cds
          Length = 1425

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 407  cccactcgaagttgtccatgaggctccacacgaagtagcc 446
            ||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 1294 cccactcaaagttgtccatcaggctccacacaaagtagcc 1255
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>dbj|AK066850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013081O13, full
            insert sequence
          Length = 2770

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 175/223 (78%), Gaps = 1/223 (0%)
 Strand = Plus / Minus

                                                                        
Query: 334  gacatctttggagtcctctcctgcgtttcaaaatccacgtaatacagcccgaacctcacg 393
            |||||| ||||| |||| |||||||| || |||||||| |  |||| ||| ||| | |||
Sbjct: 2757 gacatccttggaatcctttcctgcgtgtcgaaatccacttggtacaacccaaacttgacg 2698

                                                                        
Query: 394  gtgaagccaaaaccccactcgaagttgtccatgaggctccacacgaagtagccaccgcac 453
            ||| | ||| || ||||||| || ||||||| ||    |||| |||||||||| ||  ||
Sbjct: 2697 gtgtaaccataaacccactcaaaattgtccacgattgaccacgcgaagtagccccct-ac 2639

                                                                        
Query: 454  gtttgctcctctcctgactgctgaagaaatgcacgtcagataaccctgcaggtaattcac 513
            |||||||||  |||||| ||||||||| |   || | || ||| | |||| ||| || ||
Sbjct: 2638 gtttgctcccttcctgattgctgaagagagatacttgaggtaatcatgcatgtagttgac 2579

                                                       
Query: 514  tcttncaacgtcattgatcaagtcctccatactgttatcgctg 556
            |||| | ||||| ||||||||||| ||||| ||| ||||||||
Sbjct: 2578 tctttcgacgtcgttgatcaagtcttccatgctggtatcgctg 2536
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>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 407  cccactcgaagttgtccatgaggctccacacgaagtagcc 446
            |||||||||||||||||| |||   |||||||||||||||
Sbjct: 6248 cccactcgaagttgtccaggagcgaccacacgaagtagcc 6209
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>emb|CR361541.11| Zebrafish DNA sequence from clone DKEY-99G10 in linkage group 17,
              complete sequence
          Length = 123196

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 151    taatattttcctataagaaaaa 172
              ||||||||||||||||||||||
Sbjct: 120855 taatattttcctataagaaaaa 120876
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 128      atgtgtagcagactagcagtac 149
                ||||||||||||||||||||||
Sbjct: 18318026 atgtgtagcagactagcagtac 18318005
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>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0463G11
          Length = 154188

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 128   atgtgtagcagactagcagtac 149
             ||||||||||||||||||||||
Sbjct: 32762 atgtgtagcagactagcagtac 32741
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>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06,
             complete sequence
          Length = 134001

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 131   tgtagcagactagcagtacctaata 155
             |||||||||||||||||||| ||||
Sbjct: 36201 tgtagcagactagcagtaccaaata 36177
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>ref|XM_788028.1| PREDICTED: Strongylocentrotus purpuratus similar to Lactase-phlorizin
            hydrolase precursor (Lactase-glycosylceramidase)
            (LOC588338), mRNA
          Length = 1242

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 408  ccactcgaagttgtccatgag 428
            |||||||||||||||||||||
Sbjct: 1047 ccactcgaagttgtccatgag 1027
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>emb|AL049575.7|HSDJ316D7 Human DNA sequence from clone RP1-316D7 on chromosome 11p13 Contains
             part of the gene for G2 protein, ESTs, STSs and GSSs,
             complete sequence
          Length = 94835

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 460   tcctctcctgactgctgaaga 480
             |||||||||||||||||||||
Sbjct: 42884 tcctctcctgactgctgaaga 42904
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 407     cccactcgaagttgtccatga 427
               |||||||||||||||||||||
Sbjct: 1103521 cccactcgaagttgtccatga 1103501
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>gb|AC035138.9| Homo sapiens chromosome 10 clone RP11-314D6, complete sequence
          Length = 184328

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 146   gtacctaatattttcctataa 166
             |||||||||||||||||||||
Sbjct: 35666 gtacctaatattttcctataa 35686
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>gb|AF086819.2|AF086819 Thermobifida fusca SbpA (sbpA) gene, partial cds; BglA (bglA), BglB
            (bglB), BglC (bglC), and transcription regulator CelR
            (celR) genes, complete cds; and unknown gene
          Length = 5996

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 407  cccactcgaagttgtccatga 427
            |||||||||||||||||||||
Sbjct: 3875 cccactcgaagttgtccatga 3855
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 131     tgtagcagactagcagtacctaata 155
               |||||||||||||||||||| ||||
Sbjct: 7758615 tgtagcagactagcagtaccaaata 7758591
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>gb|AC132487.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0499F10,
             complete sequence
          Length = 75032

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 131   tgtagcagactagcagtacctaata 155
             |||||||||||||||||||| ||||
Sbjct: 69123 tgtagcagactagcagtaccaaata 69099
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>gb|AC165963.4| Mus musculus BAC clone RP23-338N22 from chromosome 7, complete sequence
          Length = 218284

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 58    atataccttcacatcaccctaaat 81
             |||||||||||||| |||||||||
Sbjct: 18253 atataccttcacatgaccctaaat 18276
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>gb|AC160538.8| Mus musculus chromosome 15, clone RP24-156D3, complete sequence
          Length = 158943

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   tgatcaagtcctccatactg 547
             ||||||||||||||||||||
Sbjct: 57071 tgatcaagtcctccatactg 57090
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>gb|AC132246.2| Mus musculus BAC clone RP24-421K16 from chromosome 7, complete sequence
          Length = 155682

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 58     atataccttcacatcaccctaaat 81
              |||||||||||||| |||||||||
Sbjct: 127776 atataccttcacatgaccctaaat 127799
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>gb|AC129221.3| Mus musculus BAC clone RP24-480M20 from chromosome 7, complete sequence
          Length = 202119

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 58     atataccttcacatcaccctaaat 81
              |||||||||||||| |||||||||
Sbjct: 102118 atataccttcacatgaccctaaat 102141
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>gb|AC141628.2| Mus musculus BAC clone RP24-358E15 from chromosome 18, complete sequence
          Length = 170129

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    tacctaatattttcctataa 166
              ||||||||||||||||||||
Sbjct: 153988 tacctaatattttcctataa 154007
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>gb|AC127423.4| Mus musculus BAC clone RP24-487D5 from chromosome 7, complete sequence
          Length = 160293

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 58    atataccttcacatcaccctaaat 81
             |||||||||||||| |||||||||
Sbjct: 75942 atataccttcacatgaccctaaat 75919
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>gb|AC122924.2| Mus musculus BAC clone RP23-39M16 from 12, complete sequence
          Length = 228614

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   tattttcctataagaaaaag 173
             ||||||||||||||||||||
Sbjct: 94717 tattttcctataagaaaaag 94736
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>gb|AC113976.13| Mus musculus chromosome 15, clone RP23-146F23, complete sequence
          Length = 184010

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   tgatcaagtcctccatactg 547
             ||||||||||||||||||||
Sbjct: 47897 tgatcaagtcctccatactg 47878
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>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29
          Length = 302007

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 407   cccactcgaagttgtccatgaggctccacacgaagtagcc 446
             ||||||||||||||||||  |||  ||||| |||||||||
Sbjct: 16493 cccactcgaagttgtccagcagggaccacaggaagtagcc 16454
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>emb|CR376745.11| Zebrafish DNA sequence from clone CH211-147K10 in linkage group 25,
             complete sequence
          Length = 186587

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   agtctgctctcagcgtctgc 282
             ||||||||||||||||||||
Sbjct: 84381 agtctgctctcagcgtctgc 84400
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>emb|BX470121.7| Zebrafish DNA sequence from clone DKEY-267G17 in linkage group 7,
             complete sequence
          Length = 97476

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   tatcatgagtctgctctcag 275
             ||||||||||||||||||||
Sbjct: 11739 tatcatgagtctgctctcag 11758
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>gb|AC020630.21| Homo sapiens 3 BAC RP11-197N19 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 164519

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 62   accttcacatcaccctaaat 81
            ||||||||||||||||||||
Sbjct: 1653 accttcacatcaccctaaat 1672
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 407     cccactcgaagttgtccatgaggctcca 434
               ||||||||||||||||||  ||||||||
Sbjct: 1181795 cccactcgaagttgtccagcaggctcca 1181768
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 407     cccactcgaagttgtccatgaggctccacacgaagtagcc 446
               ||||||||||||||||||  ||   |||||||||||||||
Sbjct: 6771304 cccactcgaagttgtccagcagcgaccacacgaagtagcc 6771343
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>gb|AC133647.3| Mus musculus BAC clone RP23-287D22 from chromosome 7, complete sequence
          Length = 197003

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 58    atataccttcacatcaccctaaat 81
             |||||||||||||| |||||||||
Sbjct: 10607 atataccttcacatgaccctaaat 10630
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>emb|BX088724.6| Zebrafish DNA sequence from clone DKEY-15G22, complete sequence
          Length = 198368

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    tatagtatctatattcactg 200
              ||||||||||||||||||||
Sbjct: 128401 tatagtatctatattcactg 128382
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>emb|Z29625.1|SSBGL3GE Streptomyces sp. QM-B814 (ATCC 11238) bgl3 gene for beta-glucosidase
          Length = 2081

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 407  cccactcgaagttgtccatgaggctccacacgaagtagcc 446
            ||||||||||||||||||  |||  ||||| |||||||||
Sbjct: 1500 cccactcgaagttgtccagcagggaccacaggaagtagcc 1461
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>dbj|AB073638.2| Neotermes koshunensis NkBG mRNA for beta-glucosidase, complete cds
          Length = 1677

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 408  ccactcgaagttgtccatgaggctccac 435
            |||||||||||||||||| || ||||||
Sbjct: 1398 ccactcgaagttgtccatcagactccac 1371
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>gb|AC110160.10| Mus musculus chromosome 1, clone RP23-66A20, complete sequence
          Length = 179096

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    aagtgatgacaacctgaagt 48
             ||||||||||||||||||||
Sbjct: 39062 aagtgatgacaacctgaagt 39081
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>gb|AC149056.6| Mus musculus BAC clone RP23-344G11 from chromosome 7, complete sequence
          Length = 199549

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 58     atataccttcacatcaccctaaat 81
              |||||||||||||| |||||||||
Sbjct: 196050 atataccttcacatgaccctaaat 196073
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>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 142    agcagtacctaatattttcctata 165
              |||| |||||||||||||||||||
Sbjct: 944222 agcattacctaatattttcctata 944199
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>emb|AL935182.13| Zebrafish DNA sequence from clone CH211-121I12, complete sequence
          Length = 186045

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   tatagtatctatattcactg 200
             ||||||||||||||||||||
Sbjct: 76970 tatagtatctatattcactg 76951
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>gb|AC149279.3| Mus musculus BAC clone RP24-89F23 from 7, complete sequence
          Length = 210311

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 58    atataccttcacatcaccctaaat 81
             |||||||||||||| |||||||||
Sbjct: 28544 atataccttcacatgaccctaaat 28567
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>emb|CR388402.15| Zebrafish DNA sequence from clone DKEY-97I21 in linkage group 1, complete
              sequence
          Length = 155300

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    taatattttcctataagaaa 170
              ||||||||||||||||||||
Sbjct: 135984 taatattttcctataagaaa 136003
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>gb|AC149869.2| Mus musculus BAC clone RP23-3E12 from 7, complete sequence
          Length = 195392

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 58    atataccttcacatcaccctaaat 81
             |||||||||||||| |||||||||
Sbjct: 10680 atataccttcacatgaccctaaat 10703
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>gb|AC149087.4| Mus musculus BAC clone RP23-240E3 from 18, complete sequence
          Length = 227785

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   tacctaatattttcctataa 166
             ||||||||||||||||||||
Sbjct: 72711 tacctaatattttcctataa 72730
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>gb|AC147029.3| Mus musculus BAC clone RP23-239P5 from 12, complete sequence
          Length = 194385

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   tattttcctataagaaaaag 173
             ||||||||||||||||||||
Sbjct: 63955 tattttcctataagaaaaag 63936
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>emb|AL844559.14| Zebrafish DNA sequence from clone DKEY-14K1, complete sequence
          Length = 216608

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   taatattttcctataagaaa 170
             ||||||||||||||||||||
Sbjct: 30483 taatattttcctataagaaa 30502
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>emb|AL714021.12| Mouse DNA sequence from clone RP23-305F20 on chromosome X, complete
              sequence
          Length = 182607

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 229    tggatctgacagtagaatggctgc 252
              |||||||||||||||| |||||||
Sbjct: 139635 tggatctgacagtagattggctgc 139658


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,657,152
Number of Sequences: 3902068
Number of extensions: 3657152
Number of successful extensions: 57810
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 57628
Number of HSP's gapped (non-prelim): 183
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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