ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags14f02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017448.1| Zea mays clone EL01N0406C01.c mRNA sequence Length = 770 Score = 446 bits (225), Expect = e-122 Identities = 325/357 (91%), Gaps = 1/357 (0%) Strand = Plus / Minus Query: 187 tttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgc 246 ||||||| |||||||| ||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 421 tttgaggaagtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgc 362 Query: 247 tcctcaaccaagaaagcacggatgatcctttccctcactgcagttccagagagcactcca 306 || ||||||| ||||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 361 tcttcaaccaggaaagcacggatgatcctttctctaactgcagttccagatagtactccc 302 Query: 307 ccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgtattcagta 366 |||||||||||||||||||| |||||||||||||||| ||| || |||||||| |||| Sbjct: 301 ccatagggacggttcacagttctgcggttcctagacaacctggaccttttgtactcagct 242 Query: 367 ggcctgaggtggggaataccctggatcttcttcccggtcacagggcacttggggccgctc 426 ||||| || |||||||| ||||||||||||||||||||||| || |||||||| ||||| Sbjct: 241 ggcctcagatggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctg 182 Query: 427 gccctcttcttggtgtactggtacacgagcttgccacctggggtcttgacgaccccgcgt 486 || ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 181 gctctcttcttggtgtactggtacacgagcttgccaccaggggtcttgacga-cccgcgt 123 Query: 487 ctggttggacttggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 543 |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 122 ctggttggacttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccat 66
>gb|AY104935.1| Zea mays PCO108550 mRNA sequence Length = 762 Score = 446 bits (225), Expect = e-122 Identities = 325/357 (91%), Gaps = 1/357 (0%) Strand = Plus / Minus Query: 187 tttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgc 246 ||||||| |||||||| ||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 449 tttgaggaagtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgc 390 Query: 247 tcctcaaccaagaaagcacggatgatcctttccctcactgcagttccagagagcactcca 306 || ||||||| ||||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 389 tcttcaaccaggaaagcacggatgatcctttctctaactgcagttccagatagtactccc 330 Query: 307 ccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgtattcagta 366 |||||||||||||||||||| |||||||||||||||| ||| || |||||||| |||| Sbjct: 329 ccatagggacggttcacagttctgcggttcctagacaacctggaccttttgtactcagct 270 Query: 367 ggcctgaggtggggaataccctggatcttcttcccggtcacagggcacttggggccgctc 426 ||||| || |||||||| ||||||||||||||||||||||| || |||||||| ||||| Sbjct: 269 ggcctcagatggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctg 210 Query: 427 gccctcttcttggtgtactggtacacgagcttgccacctggggtcttgacgaccccgcgt 486 || ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 209 gctctcttcttggtgtactggtacacgagcttgccaccaggggtcttgacga-cccgcgt 151 Query: 487 ctggttggacttggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 543 |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 150 ctggttggacttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccat 94
>ref|XM_482582.1| Oryza sativa (japonica cultivar-group), mRNA Length = 647 Score = 412 bits (208), Expect = e-112 Identities = 314/348 (90%), Gaps = 1/348 (0%) Strand = Plus / Minus Query: 196 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 255 |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 421 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgctcctcgacc 362 Query: 256 aagaaagcacggatgatcctttccctcactgcagttccagagagcactccaccataggga 315 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 361 aagaaagcacggatgatcctttccctaactgcagttccagagagcactccaccatatgga 302 Query: 316 cggttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgagg 375 |||||||||||||||||||||||||||| ||| || || ||||| |||| |||||| | | Sbjct: 301 cggttcacagtcctgcggttcctagacaacctggacctcttgtactcagcaggcctcaag 242 Query: 376 tggggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttc 435 |||||||| |||||||||||||||||||| || |||||||| || ||||||||||||||| Sbjct: 241 tggggaatcccctggatcttcttcccggtgacggggcacttcggcccgctcgccctcttc 182 Query: 436 ttggtgtactggtacacgagcttgccacctggggtcttgacgaccccgcgtctggttgga 495 || |||||||||||||| ||| | |||||||||||||||||||||| | |||||||| || Sbjct: 181 ttcgtgtactggtacacaagcctcccacctggggtcttgacgaccctg-gtctggttcga 123 Query: 496 cttggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 543 ||| || || |||||||| | |||||||||||| || ||||||||||| Sbjct: 122 cttagtcgcgtagctgtgacgcttccggtaggtgagccgctgcaccat 75
>dbj|AK062479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-G01, full insert sequence Length = 647 Score = 404 bits (204), Expect = e-109 Identities = 313/348 (89%), Gaps = 1/348 (0%) Strand = Plus / Minus Query: 196 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 255 |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 421 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgctcctcgacc 362 Query: 256 aagaaagcacggatgatcctttccctcactgcagttccagagagcactccaccataggga 315 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 361 aagaaagcacggatgatcctttccctaactgcagttccagagagcactccaccatatgga 302 Query: 316 cggttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgagg 375 |||||||||||||||||||||||||||| ||| || || ||||| |||| |||||| | | Sbjct: 301 cggttcacagtcctgcggttcctagacaacctggacctcttgtactcagcaggcctcaag 242 Query: 376 tggggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttc 435 |||||||| |||||||||||||||||||| || |||||||| || ||||||||||||||| Sbjct: 241 tggggaatcccctggatcttcttcccggtgacggggcacttcggcccgctcgccctcttc 182 Query: 436 ttggtgtactggtacacgagcttgccacctggggtcttgacgaccccgcgtctggttgga 495 || |||||||||||||| ||| | ||||||||| |||||||||||| | |||||||| || Sbjct: 181 ttcgtgtactggtacacaagcctcccacctgggatcttgacgaccctg-gtctggttcga 123 Query: 496 cttggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 543 ||| || || |||||||| | |||||||||||| || ||||||||||| Sbjct: 122 cttagtcgcgtagctgtgacgcttccggtaggtgagccgctgcaccat 75
>gb|BT017980.1| Zea mays clone EL01N0525C04.c mRNA sequence Length = 722 Score = 327 bits (165), Expect = 2e-86 Identities = 313/361 (86%), Gaps = 1/361 (0%) Strand = Plus / Minus Query: 183 ttactttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatctt 242 |||||||| || |||||||||||||| || |||||||||| |||||||| |||||||| Sbjct: 432 ttactttgcggctgtcttgtccttggttttttgtattttcaggaccttcttgacaatctt 373 Query: 243 ctgctcctcaaccaagaaagcacggatgatcctttccctcactgcagttccagagagcac 302 ||||||||| |||||||| ||||| ||||| || ||||| || ||| |||||||||| || Sbjct: 372 ctgctcctcgaccaagaaggcacgaatgattctctccctaacagcaattccagagagtac 313 Query: 303 tccaccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgtattc 362 ||||||||| ||||||||||||||||||||| |||||| || ||| || |||||||| || Sbjct: 312 tccaccataaggacggttcacagtcctgcggctcctaggcaacctggaccttttgtactc 253 Query: 363 agtaggcctgaggtggggaataccctggatcttcttcccggtcacagggcacttggggcc 422 || |||||| | ||| || || |||||||| ||||||||||| || ||||||||||| || Sbjct: 252 agcaggcctcaagtgagggatcccctggattttcttcccggtgacggggcacttgggccc 193 Query: 423 gctcgccctcttcttggtgtactggtacacgagcttgccacctggggtcttgacgacccc 482 |||||||||||||||||||||||||||||| ||||| || |||||||||||||||| | | Sbjct: 192 gctcgccctcttcttggtgtactggtacacaagcttcccgcctggggtcttgacga-ctc 134 Query: 483 gcgtctggttggacttggtggcatagctgtgcctcttccggtaggtcagacgctgcacca 542 | |||||||||||||| || || |||||||| | ||||||||| || || |||||||||| Sbjct: 133 gggtctggttggacttcgtagcgtagctgtgacgcttccggtacgtgaggcgctgcacca 74 Query: 543 t 543 | Sbjct: 73 t 73
>gb|AY105537.1| Zea mays PCO097944 mRNA sequence Length = 694 Score = 325 bits (164), Expect = 9e-86 Identities = 303/348 (87%), Gaps = 1/348 (0%) Strand = Plus / Minus Query: 196 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 255 |||||||||||||| || |||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 423 gtcttgtccttggttttttgtattttcaggaccttcttgacaatcttctgctcctcgacc 364 Query: 256 aagaaagcacggatgatcctttccctcactgcagttccagagagcactccaccataggga 315 ||||| ||||| ||||| || ||||| || ||| |||||||||| ||||||||||| ||| Sbjct: 363 aagaaggcacgaatgattctctccctaacagcaattccagagagtactccaccataagga 304 Query: 316 cggttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgagg 375 |||||||||||||||||| |||||| || ||| || |||||||| |||| |||||| | | Sbjct: 303 cggttcacagtcctgcggctcctaggcaacctggaccttttgtactcagcaggcctcaag 244 Query: 376 tggggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttc 435 || || || |||||||| ||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 243 tgagggatcccctggattttcttcccggtgacggggcacttgggcccgctcgccctcttc 184 Query: 436 ttggtgtactggtacacgagcttgccacctggggtcttgacgaccccgcgtctggttgga 495 ||||||||||||||||| ||||| || |||||||||||||||| | || ||||||||||| Sbjct: 183 ttggtgtactggtacacaagcttcccgcctggggtcttgacga-ctcgggtctggttgga 125 Query: 496 cttggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 543 ||| || || |||||||| | ||||||||| || || ||||||||||| Sbjct: 124 cttcgtagcgtagctgtgacgcttccggtacgtgaggcgctgcaccat 77
>ref|XM_480178.1| Oryza sativa (japonica cultivar-group), mRNA Length = 666 Score = 305 bits (154), Expect = 8e-80 Identities = 299/346 (86%), Gaps = 1/346 (0%) Strand = Plus / Minus Query: 198 cttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaa 257 |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 420 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 361 Query: 258 gaaagcacggatgatcctttccctcactgcagttccagagagcactccaccatagggacg 317 ||||| ||||||||||| || || |||||||| ||||| || || ||||| || ||||| Sbjct: 360 aaaagcccggatgatcctctctctgactgcagtaccagacaggacaccaccgtaaggacg 301 Query: 318 gttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgaggtg 377 |||||| |||||||| ||||| |||| || || || ||||| |||| ||| || ||||| Sbjct: 300 gttcacggtcctgcgattccttgacaatctggacctcttgtactcagcaggtctcaggtg 241 Query: 378 gggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttctt 437 ||||| || ||||||||||||||||| || ||||| || || |||||||||| |||||| Sbjct: 240 tggaattccttggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttctt 181 Query: 438 ggtgtactggtacacgagcttgccacctggggtcttgacgaccccgcgtctggttggact 497 ||||||||||||||| ||| | ||||| ||||||||||||| | || ||||||||||| | Sbjct: 180 ggtgtactggtacacaagcctcccaccgggggtcttgacga-cgcgggtctggttggatt 122 Query: 498 tggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 543 | ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 121 tcgtggcgtagctgtgccgcttccggtaggtcagccgctgcaccat 76
>dbj|AK103424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K17, full insert sequence Length = 666 Score = 305 bits (154), Expect = 8e-80 Identities = 299/346 (86%), Gaps = 1/346 (0%) Strand = Plus / Minus Query: 198 cttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaa 257 |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 420 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 361 Query: 258 gaaagcacggatgatcctttccctcactgcagttccagagagcactccaccatagggacg 317 ||||| ||||||||||| || || |||||||| ||||| || || ||||| || ||||| Sbjct: 360 aaaagcccggatgatcctctctctgactgcagtaccagacaggacaccaccgtaaggacg 301 Query: 318 gttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgaggtg 377 |||||| |||||||| ||||| |||| || || || ||||| |||| ||| || ||||| Sbjct: 300 gttcacggtcctgcgattccttgacaatctggacctcttgtactcagcaggtctcaggtg 241 Query: 378 gggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttctt 437 ||||| || ||||||||||||||||| || ||||| || || |||||||||| |||||| Sbjct: 240 tggaattccttggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttctt 181 Query: 438 ggtgtactggtacacgagcttgccacctggggtcttgacgaccccgcgtctggttggact 497 ||||||||||||||| ||| | ||||| ||||||||||||| | || ||||||||||| | Sbjct: 180 ggtgtactggtacacaagcctcccaccgggggtcttgacga-cgcgggtctggttggatt 122 Query: 498 tggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 543 | ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 121 tcgtggcgtagctgtgccgcttccggtaggtcagccgctgcaccat 76
>gb|AY105535.1| Zea mays PCO097943 mRNA sequence Length = 589 Score = 280 bits (141), Expect = 5e-72 Identities = 237/269 (88%) Strand = Plus / Minus Query: 196 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 255 |||||||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 537 gtcttgtccttggttttctgtattttcaggaccttcttgacaatattctgctcctcaacc 478 Query: 256 aagaaagcacggatgatcctttccctcactgcagttccagagagcactccaccataggga 315 |||||||||||||| || || ||||| || ||| |||||||||| ||||||||||| ||| Sbjct: 477 aagaaagcacggataattctctccctaacagcaattccagagagtactccaccataagga 418 Query: 316 cggttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgagg 375 ||||| |||||||||||||||||||||| ||| || || ||||| || | ||| || | | Sbjct: 417 cggttaacagtcctgcggttcctagacaacctggacctcttgtactcggcaggtctcaag 358 Query: 376 tggggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttc 435 ||||| || |||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 357 tgggggatcccctggatcttcttcccggtgacggggcacttgggaccgctcgccctcttc 298 Query: 436 ttggtgtactggtacacgagcttgccacc 464 |||||||| |||||||| ||||| ||||| Sbjct: 297 ttggtgtattggtacacaagcttcccacc 269 Score = 52.0 bits (26), Expect = 0.002 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 462 acctggggtcttgacgaccccgcgtctggttggacttggtggcatagctgtgcctcttcc 521 |||||||||||| ||||||| | ||||| ||||| || || || |||||||| | ||| | Sbjct: 257 acctggggtcttcacgacccgg-gtctgattggattttgtcgcgtagctgtgacgctttc 199 Query: 522 ggtaggtcagacgctgcaccat 543 ||||||| || ||||||||||| Sbjct: 198 ggtaggtgaggcgctgcaccat 177
>gb|AY846826.1| Triticum aestivum ribosomal protein l34 mRNA, complete cds Length = 404 Score = 238 bits (120), Expect = 2e-59 Identities = 292/348 (83%), Gaps = 1/348 (0%) Strand = Plus / Minus Query: 196 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 255 ||||| |||||||||||||| || || | ||||||||||||||||||||||||||| ||| Sbjct: 389 gtcttctccttggtcttctggatcttaagcaccttcttcacaatcttctgctcctccacc 330 Query: 256 aagaaagcacggatgatcctttccctcactgcagttccagagagcactccaccataggga 315 || || || | |||||||| ||||| ||||||| ||||| || || |||||||| ||| Sbjct: 329 aaaaacgccctaatgatcctctccctgactgcaggaccagacagaacaccaccataagga 270 Query: 316 cggttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgagg 375 |||||||||||||| | |||||| |||| || | || ||||| ||||||||||| ||| Sbjct: 269 cggttcacagtcctcctgttcctcgacaatctgggcctcttgtactcagtaggcctcagg 210 Query: 376 tggggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttc 435 || || || || ||||||||||| ||||| || ||||| || || || ||||||| |||| Sbjct: 209 tgtgggattccttggatcttcttgccggtaaccgggcattttggcccactcgcccgcttc 150 Query: 436 ttggtgtactggtacacgagcttgccacctggggtcttgacgaccccgcgtctggttgga 495 |||||||||||||| || ||||| ||||||||||||||||||| | || ||||| || || Sbjct: 149 ttggtgtactggtagacaagcttcccacctggggtcttgacga-cgcgagtctgattcga 91 Query: 496 cttggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 543 ||||||||| |||||||| | ||| ||||| ||||| ||||||||||| Sbjct: 90 cttggtggcgtagctgtggcgctttcggtatgtcagccgctgcaccat 43
>dbj|AK059470.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-D12, full insert sequence Length = 562 Score = 238 bits (120), Expect = 2e-59 Identities = 150/160 (93%) Strand = Plus / Minus Query: 184 tactttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttc 243 |||||||||| | |||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 324 tactttgaggctgacttgtccttggttttctgtattttcaagactttcttcacaatcttc 265 Query: 244 tgctcctcaaccaagaaagcacggatgatcctttccctcactgcagttccagagagcact 303 ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 264 tgctcttcaaccaagaaagcacgaatgatcctttccctaactgcagttccagagagcact 205 Query: 304 ccaccatagggacggttcacagtcctgcggttcctagaca 343 ||||||||||||||||||||||| |||||||||||||||| Sbjct: 204 ccaccatagggacggttcacagttctgcggttcctagaca 165 Score = 87.7 bits (44), Expect = 4e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 462 acctggggtcttgacgaccccgcgtctggttggacttggtggcatagctgtgcctcttcc 521 |||||| ||||||||||||| ||||||| || ||||| ||||||||||||||||| || | Sbjct: 164 acctggagtcttgacgaccc-gcgtctgattagacttcgtggcatagctgtgccttttgc 106 Query: 522 ggtaggtcagacgctgcaccatgtttccgtcgtctccgccgccg 565 |||| ||||| ||||||||||| | |||||| | ||||||||| Sbjct: 105 ggtacgtcaggcgctgcaccatctcgccgtcgccgccgccgccg 62 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 75 ctaaaacatttagctagaagggactaaaccattgatcataaccaccaacaaaaatatttt 134 |||||||||| ||||||||| | ||| |||||||||||| |||| |||||||||| |||| Sbjct: 429 ctaaaacattcagctagaagaggctagaccattgatcatcaccatcaacaaaaatgtttt 370 Query: 135 ccttgttta 143 ||||||||| Sbjct: 369 ccttgttta 361
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 273 cctttccctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcg 332 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 14636947 cctttccctaactgcagttccagagagcactccaccatagggacggttcacagttctgcg 14637006 Query: 333 gttcctagacagccttgatcttttgtattcagtaggcctgaggtggggaat 383 ||||||||||| ||| ||||| ||||| |||| ||||||||| |||||||| Sbjct: 14637007 gttcctagacaacctggatctcttgtactcagcaggcctgagatggggaat 14637057 Score = 147 bits (74), Expect = 5e-32 Identities = 80/82 (97%) Strand = Plus / Plus Query: 385 ccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtac 444 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 14638108 ccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttcttggtgtac 14638167 Query: 445 tggtacacgagcttgccacctg 466 |||||||||||||||||||||| Sbjct: 14638168 tggtacacgagcttgccacctg 14638189 Score = 119 bits (60), Expect = 1e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 184 tactttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttc 243 |||||||||| | |||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 14636774 tactttgaggctgacttgtccttggttttctgtattttcaagactttcttcacaatcttc 14636833 Query: 244 tgctcctcaaccaagaaagcacggatgatcct 275 ||||| ||||||||||||||||| |||||||| Sbjct: 14636834 tgctcttcaaccaagaaagcacgaatgatcct 14636865 Score = 87.7 bits (44), Expect = 4e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 462 acctggggtcttgacgaccccgcgtctggttggacttggtggcatagctgtgcctcttcc 521 |||||| ||||||||||||| ||||||| || ||||| ||||||||||||||||| || | Sbjct: 14638300 acctggagtcttgacgaccc-gcgtctgattagacttcgtggcatagctgtgccttttgc 14638358 Query: 522 ggtaggtcagacgctgcaccatgtttccgtcgtctccgccgccg 565 |||| ||||| ||||||||||| | |||||| | ||||||||| Sbjct: 14638359 ggtacgtcaggcgctgcaccatctcgccgtcgccgccgccgccg 14638402 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 75 ctaaaacatttagctagaagggactaaaccattgatcataaccaccaacaaaaatatttt 134 |||||||||| ||||||||| | ||| |||||||||||| |||| |||||||||| |||| Sbjct: 14636669 ctaaaacattcagctagaagaggctagaccattgatcatcaccatcaacaaaaatgtttt 14636728 Query: 135 ccttgttta 143 ||||||||| Sbjct: 14636729 ccttgttta 14636737
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 273 cctttccctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcg 332 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 58614 cctttccctaactgcagttccagagagcactccaccatagggacggttcacagttctgcg 58673 Query: 333 gttcctagacagccttgatcttttgtattcagtaggcctgaggtggggaat 383 ||||||||||| ||| ||||| ||||| |||| ||||||||| |||||||| Sbjct: 58674 gttcctagacaacctggatctcttgtactcagcaggcctgagatggggaat 58724 Score = 147 bits (74), Expect = 5e-32 Identities = 80/82 (97%) Strand = Plus / Plus Query: 385 ccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtac 444 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 59775 ccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttcttggtgtac 59834 Query: 445 tggtacacgagcttgccacctg 466 |||||||||||||||||||||| Sbjct: 59835 tggtacacgagcttgccacctg 59856 Score = 119 bits (60), Expect = 1e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 184 tactttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttc 243 |||||||||| | |||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 58441 tactttgaggctgacttgtccttggttttctgtattttcaagactttcttcacaatcttc 58500 Query: 244 tgctcctcaaccaagaaagcacggatgatcct 275 ||||| ||||||||||||||||| |||||||| Sbjct: 58501 tgctcttcaaccaagaaagcacgaatgatcct 58532 Score = 87.7 bits (44), Expect = 4e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 462 acctggggtcttgacgaccccgcgtctggttggacttggtggcatagctgtgcctcttcc 521 |||||| ||||||||||||| ||||||| || ||||| ||||||||||||||||| || | Sbjct: 59967 acctggagtcttgacgaccc-gcgtctgattagacttcgtggcatagctgtgccttttgc 60025 Query: 522 ggtaggtcagacgctgcaccatgtttccgtcgtctccgccgccg 565 |||| ||||| ||||||||||| | |||||| | ||||||||| Sbjct: 60026 ggtacgtcaggcgctgcaccatctcgccgtcgccgccgccgccg 60069 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 75 ctaaaacatttagctagaagggactaaaccattgatcataaccaccaacaaaaatatttt 134 |||||||||| ||||||||| | ||| |||||||||||| |||| |||||||||| |||| Sbjct: 58336 ctaaaacattcagctagaagaggctagaccattgatcatcaccatcaacaaaaatgtttt 58395 Query: 135 ccttgttta 143 ||||||||| Sbjct: 58396 ccttgttta 58404
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 273 cctttccctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcg 332 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 21214454 cctttccctaactgcagttccagagagcactccaccatatggacggttcacagtcctgcg 21214513 Query: 333 gttcctagacagccttgatcttttgtattcagtaggcctgaggtggggaat 383 ||||||||||| ||| || || ||||| |||| |||||| | ||||||||| Sbjct: 21214514 gttcctagacaacctggacctcttgtactcagcaggcctcaagtggggaat 21214564 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Plus Query: 196 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 255 |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 21214292 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgctcctcgacc 21214351 Query: 256 aagaaagcacggatgatcct 275 |||||||||||||||||||| Sbjct: 21214352 aagaaagcacggatgatcct 21214371 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Minus Query: 198 cttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaa 257 |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 3289299 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 3289240 Query: 258 gaaagcacggatgatcct 275 ||||| ||||||||||| Sbjct: 3289239 aaaagcccggatgatcct 3289222 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 385 ccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtac 444 |||||||||||||||||||| || |||||||| || ||||||||||||||||| |||||| Sbjct: 21215479 ccctggatcttcttcccggtgacggggcacttcggcccgctcgccctcttcttcgtgtac 21215538 Query: 445 tggtacacgagcttgccacctg 466 |||||||| ||| | ||||||| Sbjct: 21215539 tggtacacaagcctcccacctg 21215560 Score = 85.7 bits (43), Expect = 1e-13 Identities = 74/83 (89%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 461 cacctggggtcttgacgaccccgcgtctggttggacttggtggcatagctgtgcctcttc 520 |||| |||||||||||||| | | ||||||||||| || ||||| |||||||||| |||| Sbjct: 3286942 caccgggggtcttgacgacgcgg-gtctggttggatttcgtggcgtagctgtgccgcttc 3286884 Query: 521 cggtaggtcagacgctgcaccat 543 ||||||||||| ||||||||||| Sbjct: 3286883 cggtaggtcagccgctgcaccat 3286861 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 388 tggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtactgg 447 ||||||||||||||||| || ||||| || || |||||||||| |||||||||||||||| Sbjct: 3287295 tggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttcttggtgtactgg 3287236 Query: 448 tacacgagcttgccacct 465 ||||| ||| | |||||| Sbjct: 3287235 tacacaagcctcccacct 3287218 Score = 75.8 bits (38), Expect = 1e-10 Identities = 72/82 (87%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 462 acctggggtcttgacgaccccgcgtctggttggacttggtggcatagctgtgcctcttcc 521 |||||||||||||||||||| | |||||||| ||||| || || |||||||| | ||||| Sbjct: 21215657 acctggggtcttgacgaccctg-gtctggttcgacttagtcgcgtagctgtgacgcttcc 21215715 Query: 522 ggtaggtcagacgctgcaccat 543 ||||||| || ||||||||||| Sbjct: 21215716 ggtaggtgagccgctgcaccat 21215737 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 283 actgcagttccagagagcactccaccatagggacggttcacagtcctgcggttcctagac 342 |||||||| ||||| || || ||||| || ||||||||||| |||||||| ||||| ||| Sbjct: 3289141 actgcagtaccagacaggacaccaccgtaaggacggttcacggtcctgcgattccttgac 3289082 Query: 343 a 343 | Sbjct: 3289081 a 3289081 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 atcaaatgtttcacaatctctg 43 |||||||||||||||||||||| Sbjct: 18477035 atcaaatgtttcacaatctctg 18477014
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 273 cctttccctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcg 332 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 40731 cctttccctaactgcagttccagagagcactccaccatatggacggttcacagtcctgcg 40790 Query: 333 gttcctagacagccttgatcttttgtattcagtaggcctgaggtggggaat 383 ||||||||||| ||| || || ||||| |||| |||||| | ||||||||| Sbjct: 40791 gttcctagacaacctggacctcttgtactcagcaggcctcaagtggggaat 40841 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Plus Query: 196 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 255 |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 40569 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgctcctcgacc 40628 Query: 256 aagaaagcacggatgatcct 275 |||||||||||||||||||| Sbjct: 40629 aagaaagcacggatgatcct 40648 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 385 ccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtac 444 |||||||||||||||||||| || |||||||| || ||||||||||||||||| |||||| Sbjct: 41756 ccctggatcttcttcccggtgacggggcacttcggcccgctcgccctcttcttcgtgtac 41815 Query: 445 tggtacacgagcttgccacctg 466 |||||||| ||| | ||||||| Sbjct: 41816 tggtacacaagcctcccacctg 41837 Score = 75.8 bits (38), Expect = 1e-10 Identities = 72/82 (87%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 462 acctggggtcttgacgaccccgcgtctggttggacttggtggcatagctgtgcctcttcc 521 |||||||||||||||||||| | |||||||| ||||| || || |||||||| | ||||| Sbjct: 41934 acctggggtcttgacgaccctg-gtctggttcgacttagtcgcgtagctgtgacgcttcc 41992 Query: 522 ggtaggtcagacgctgcaccat 543 ||||||| || ||||||||||| Sbjct: 41993 ggtaggtgagccgctgcaccat 42014
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Minus Query: 198 cttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaa 257 |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 66866 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 66807 Query: 258 gaaagcacggatgatcct 275 ||||| ||||||||||| Sbjct: 66806 aaaagcccggatgatcct 66789 Score = 85.7 bits (43), Expect = 1e-13 Identities = 74/83 (89%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 461 cacctggggtcttgacgaccccgcgtctggttggacttggtggcatagctgtgcctcttc 520 |||| |||||||||||||| | | ||||||||||| || ||||| |||||||||| |||| Sbjct: 64509 caccgggggtcttgacgacgcgg-gtctggttggatttcgtggcgtagctgtgccgcttc 64451 Query: 521 cggtaggtcagacgctgcaccat 543 ||||||||||| ||||||||||| Sbjct: 64450 cggtaggtcagccgctgcaccat 64428 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 388 tggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtactgg 447 ||||||||||||||||| || ||||| || || |||||||||| |||||||||||||||| Sbjct: 64862 tggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttcttggtgtactgg 64803 Query: 448 tacacgagcttgccacct 465 ||||| ||| | |||||| Sbjct: 64802 tacacaagcctcccacct 64785 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 283 actgcagttccagagagcactccaccatagggacggttcacagtcctgcggttcctagac 342 |||||||| ||||| || || ||||| || ||||||||||| |||||||| ||||| ||| Sbjct: 66708 actgcagtaccagacaggacaccaccgtaaggacggttcacggtcctgcgattccttgac 66649 Query: 343 a 343 | Sbjct: 66648 a 66648
>gb|L27107.1|TOB6RPLA Nicotiana tabacum (TSC40-4) 60S ribosomal protein L34 mRNA, complete cds Length = 597 Score = 99.6 bits (50), Expect = 1e-17 Identities = 249/314 (79%), Gaps = 1/314 (0%) Strand = Plus / Minus Query: 202 tccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaagaaa 261 ||||||| ||||| || ||||| ||||||||||||||||| || || || ||||| || Sbjct: 373 tccttggctttctggatcttcaaaaccttcttcacaatcttttgttcttccaccaaaaag 314 Query: 262 gcacggatgatcctttccctcactgcagttccagagagcactccaccatagggacggttc 321 || | ||||||||||| | || ||| | || || | ||| |||||||| | ||||||| Sbjct: 313 gctcttatgatcctttcacgtacagcactgcctgacaacacaccaccataagcacggttc 254 Query: 322 acagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgaggtgggga 381 |||||||| | ||| || |||| ||||| || ||||||||||||||||| | ||| ||| Sbjct: 253 acagtcctcctgtttctcgacaatcttgacctcttgtattcagtaggcctcaagtgagga 194 Query: 382 ataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtg 441 || || || || | || || || ||||||||||| || || || |||||||||||||| Sbjct: 193 atcccttgaattctttttccagtaacagggcacttaggtccactagccctcttcttggta 134 Query: 442 tactggtacacgagcttgccacctggggtcttgacgaccccgcgtctggttggacttggt 501 |||||| | ||||| ||||||||||| ||||| |||| || ||||| || ||||| Sbjct: 133 ctctggtaaatcagctttccacctggggttttgacaaccctatgt-tggttagatttggt 75 Query: 502 ggcatagctgtgcc 515 |||||||||||||| Sbjct: 74 ggcatagctgtgcc 61
>gb|DQ160155.1| Taraxacum officinale TO121-23 (To121-23) mRNA, partial cds Length = 243 Score = 91.7 bits (46), Expect = 2e-15 Identities = 179/222 (80%), Gaps = 1/222 (0%) Strand = Plus / Minus Query: 322 acagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgaggtgggga 381 |||||||| | |||||| || | |||||| |||||||||||||| ||||| | ||| ||| Sbjct: 241 acagtccttctgttccttgataaccttgaccttttgtattcagttggcctcaagtgagga 182 Query: 382 ataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtg 441 || ||||| || |||| ||||| |||||||| || || || || || |||||||| ||| Sbjct: 181 atcccctgaattctcttgccggtaacagggcatttaggtccactagctctcttcttagtg 122 Query: 442 tactggtacacgagcttgccacctggggtcttgacgaccccgcgtctggttggacttggt 501 |||||| || ||||| ||||| ||||| |||||||| | || |||||||| ||||| Sbjct: 121 gtctggtagaccagctttccaccaggggttttgacgactctatgt-tggttggatttggt 63 Query: 502 ggcatagctgtgcctcttccggtaggtcagacgctgcaccat 543 |||||||| || | |||||||| || |||||||||||||| Sbjct: 62 agcatagctatggcgtttccggtaagtgagacgctgcaccat 21
>emb|AJ718263.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT4-24-380, cultivar Bright Yellow 2 Length = 271 Score = 87.7 bits (44), Expect = 4e-14 Identities = 171/212 (80%), Gaps = 1/212 (0%) Strand = Plus / Plus Query: 304 ccaccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgtattca 363 |||||||| | ||||||||||||||| | ||| || |||| ||||| || ||||||||| Sbjct: 49 ccaccataagcacggttcacagtcctcctgtttctcgacaatcttgacctcttgtattca 108 Query: 364 gtaggcctgaggtggggaataccctggatcttcttcccggtcacagggcacttggggccg 423 |||||||| | ||| ||||| || || || | || || || ||||||||||| || || Sbjct: 109 gtaggcctcaagtgaggaatcccttgaattctttttccagtaacagggcacttaggtcca 168 Query: 424 ctcgccctcttcttggtgtactggtacacgagcttgccacctggggtcttgacgaccccg 483 || |||||||||||||| |||||| | ||||| ||||||||||| ||||| |||| Sbjct: 169 ctagccctcttcttggtactctggtaaatcagctttccacctggggttttgacaacccta 228 Query: 484 cgtctggttggacttggtggcatagctgtgcc 515 || ||||| || ||||||||||||||||||| Sbjct: 229 tgt-tggttagatttggtggcatagctgtgcc 259
>gb|DQ407752.1| Gymnadenia conopsea ribosomal protein mRNA, complete cds Length = 773 Score = 85.7 bits (43), Expect = 1e-13 Identities = 122/147 (82%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 397 ttcccggtcacagggcacttggggccgctcgccctcttcttggtgtactggtacacgagc 456 ||||||||||||||||| || || || ||||||||||| || |||||||||||||| ||| Sbjct: 224 ttcccggtcacagggcatttcggcccactcgccctcttattcgtgtactggtacacaagc 165 Query: 457 ttgccacctggggtcttgacgaccccgcgtctggttggacttggtggcatagctgtgcct 516 | || || ||||| || || | ||| |||||||| ||||| ||||||||||| |||| Sbjct: 164 ctcccgcccggggttttcac-aaccctagtctggttagacttcgtggcatagctatgccg 106 Query: 517 cttccggtaggtcagacgctgcaccat 543 ||| | ||| || |||||||||||||| Sbjct: 105 ctttctgtatgtgagacgctgcaccat 79 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 198 cttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaa 257 |||||| |||| |||||| || |||| |||||||| |||||||| |||||||| |||| Sbjct: 423 cttgtctttggccttctggatcttcagaaccttcttaacaatcttttgctcctccaccag 364 Query: 258 gaaagcacggatgatcctttccct 281 || || ||||| ||||||||||| Sbjct: 363 aaaggcccggataatcctttccct 340
>gb|AY174764.1| Orobanche cumana 60S ribosomal protein L34 mRNA, partial cds Length = 548 Score = 85.7 bits (43), Expect = 1e-13 Identities = 211/267 (79%) Strand = Plus / Minus Query: 210 cttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggat 269 |||||| || ||||| |||||||||||||| || ||||| || || || ||||| || || Sbjct: 279 cttctgaatcttcaataccttcttcacaattttttgctcttccactaaaaaagcccgaat 220 Query: 270 gatcctttccctcactgcagttccagagagcactccaccatagggacggttcacagtcct 329 ||||| |||||||| ||| ||||||| | || |||||||| |||||| | |||||||| Sbjct: 219 aatcctctccctcacagcaattccagataatacaccaccataaggacgggttacagtcct 160 Query: 330 gcggttcctagacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 389 |||||| || | || | ||||| ||||| |||| |||||| | || ||||| || || Sbjct: 159 gcggtttctgggcaatcgagatctcttgtactcagcaggcctcaaatgaggaatcccttg 100 Query: 390 gatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtactggta 449 ||| |||| ||||| || || || ||||| ||||| ||||||||||| ||| | |||| Sbjct: 99 gattctcttgccggttacgggacatttgggtccgctagccctcttcttagtgctccggta 40 Query: 450 cacgagcttgccacctggggtcttgac 476 ||| ||||| || || ||||| ||||| Sbjct: 39 caccagcttccccccaggggttttgac 13
>gb|L27089.1|TOB6RPL Nicotiana tabacum (TSC40-3) 60S ribosomal protein L34 mRNA, complete cds Length = 630 Score = 83.8 bits (42), Expect = 6e-13 Identities = 247/314 (78%), Gaps = 1/314 (0%) Strand = Plus / Minus Query: 202 tccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaagaaa 261 ||||||| ||||| || ||||| ||||||||||||||||| || || || ||||| || Sbjct: 359 tccttggctttctggatcttcaaaaccttcttcacaatcttttgttcttccaccaaaaag 300 Query: 262 gcacggatgatcctttccctcactgcagttccagagagcactccaccatagggacggttc 321 || | ||||||||||| | || ||| | || || | ||| |||||||| | ||||||| Sbjct: 299 gctcttatgatcctttcacgtacggcactgcctgacaacacgccaccataagcacggttc 240 Query: 322 acagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgaggtgggga 381 |||||||| | ||| || |||| ||||| || ||||||||||||||||| | ||| ||| Sbjct: 239 acagtcctcctgtttctggacaatcttgacctcttgtattcagtaggcctcaagtgagga 180 Query: 382 ataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtg 441 || || || || | || || || ||||||||||| || || || ||||||||||| || Sbjct: 179 atcccttgaattctttttccagtaacagggcacttaggtccactagccctcttcttagta 120 Query: 442 tactggtacacgagcttgccacctggggtcttgacgaccccgcgtctggttggacttggt 501 ||| || | ||||| ||||||||||| ||||| |||| || ||||| || ||||| Sbjct: 119 ctctgataaatcagctttccacctggggttttgacaaccctatgt-tggttagatttggt 61 Query: 502 ggcatagctgtgcc 515 |||||||||||||| Sbjct: 60 ggcatagctgtgcc 47
>dbj|AK059401.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-B04, full insert sequence Length = 303 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 75 ctaaaacatttagctagaagggactaaaccattgatcataaccaccaacaaaaatatttt 134 |||||||||| ||||||||| | ||| |||||||||||| |||| |||||||||| |||| Sbjct: 170 ctaaaacattcagctagaagaggctagaccattgatcatcaccatcaacaaaaatgtttt 111 Query: 135 ccttgttta 143 ||||||||| Sbjct: 110 ccttgttta 102 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 184 tactttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttc 243 |||||||||| | |||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 65 tactttgaggctgacttgtccttggttttctgtattttcaagactttcttcacaatcttc 6 Query: 244 tgctc 248 ||||| Sbjct: 5 tgctc 1
>gb|AY389653.1| Hyacinthus orientalis ribosomal protein L34 (RPL34) mRNA, complete cds Length = 608 Score = 75.8 bits (38), Expect = 1e-10 Identities = 189/238 (79%), Gaps = 1/238 (0%) Strand = Plus / Minus Query: 202 tccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaagaaa 261 ||||||| |||||| || |||| || |||||||||||||||||||| || |||||| | Sbjct: 368 tccttggccttctgaatcttcagaactttcttcacaatcttctgctcttctaccaag-ag 310 Query: 262 gcacggatgatcctttccctcactgcagttccagagagcactccaccatagggacggttc 321 || |||||||| || ||| |||| || | |||||||| ||||||||||| | ||| ||| Sbjct: 309 gcccggatgattctctccttcaccgcgctgccagagagaactccaccatatgcacgattc 250 Query: 322 acagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgaggtgggga 381 || ||||| | |||||| | || ||| || || ||||| |||||||| || || || ||| Sbjct: 249 actgtcctcctgttccttgccaacctagacctcttgtactcagtaggtctaagatgagga 190 Query: 382 ataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttgg 439 || || || || |||| || || ||||||||| | || || ||||||||||||||| Sbjct: 189 atcccttgaattctctttccagtgacagggcaccttggccctttcgccctcttcttgg 132
>gb|BT013115.1| Lycopersicon esculentum clone 114402R, mRNA sequence Length = 663 Score = 75.8 bits (38), Expect = 1e-10 Identities = 246/314 (78%), Gaps = 1/314 (0%) Strand = Plus / Minus Query: 202 tccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaagaaa 261 ||||||| ||||| || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 377 tccttggctttctggatcttcaaaaccttcttcacgatcttttgttcttcaaccaaaaag 318 Query: 262 gcacggatgatcctttccctcactgcagttccagagagcactccaccatagggacggttc 321 || | |||||||||||| | || ||| | || || | ||| |||||||| | ||||||| Sbjct: 317 gctctgatgatcctttcacgtacagcactgccggacaacacaccaccataagcacggttc 258 Query: 322 acagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgaggtgggga 381 |||||||| | ||||||||| | ||| ||||| ||||| |||| ||| || | ||| ||| Sbjct: 257 acagtcctcctgttcctagataacctggatctcttgtactcagcaggtctcaagtgtgga 198 Query: 382 ataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtg 441 || || || || |||| || || ||||||||||| || || | ||||||||||| || Sbjct: 197 atcccttgaattctctttccagttacagggcacttaggtccattagccctcttcttcgta 138 Query: 442 tactggtacacgagcttgccacctggggtcttgacgaccccgcgtctggttggacttggt 501 |||||| | ||||| ||||||||||| || || |||| || ||||| |||||||| Sbjct: 137 gtctggtaaatcagctttccacctggggttttcacaaccctatgt-tggttcgacttggt 79 Query: 502 ggcatagctgtgcc 515 |||||||| |||| Sbjct: 78 tgcatagctatgcc 65
>ref|NM_113811.3| Arabidopsis thaliana structural constituent of ribosome AT3G28900 mRNA, complete cds Length = 574 Score = 73.8 bits (37), Expect = 6e-10 Identities = 157/197 (79%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| |||||||||||||||||||| || ||||||||||| || | || |||||| ||| Sbjct: 357 ttcaaaaccttcttcacaatcttctgttcttcaaccaagaaggccctgacgatcctctcc 298 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || ||| |||||| || || |||||||| | ||| ||||| ||||| |||||| Sbjct: 297 ctaacagcaactccagatagaacaccaccatatgcacgattcactgtcctctcgttcctt 238 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctggatcttcttc 399 | || |||||| |||||||| |||| ||| || | || ||||| || ||||| |||| Sbjct: 237 gccaaccttgaccttttgtactcagcaggtctcaaatgcggaatcccttggattctcttg 178 Query: 400 ccggtcacagggcactt 416 || || ||||||||||| Sbjct: 177 ccagtaacagggcactt 161
>gb|AY091359.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At3g28900) mRNA, complete cds Length = 394 Score = 73.8 bits (37), Expect = 6e-10 Identities = 157/197 (79%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| |||||||||||||||||||| || ||||||||||| || | || |||||| ||| Sbjct: 323 ttcaaaaccttcttcacaatcttctgttcttcaaccaagaaggccctgacgatcctctcc 264 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || ||| |||||| || || |||||||| | ||| ||||| ||||| |||||| Sbjct: 263 ctaacagcaactccagatagaacaccaccatatgcacgattcactgtcctctcgttcctt 204 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctggatcttcttc 399 | || |||||| |||||||| |||| ||| || | || ||||| || ||||| |||| Sbjct: 203 gccaaccttgaccttttgtactcagcaggtctcaaatgcggaatcccttggattctcttg 144 Query: 400 ccggtcacagggcactt 416 || || ||||||||||| Sbjct: 143 ccagtaacagggcactt 127
>gb|AY045818.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At3g28900) mRNA, complete cds Length = 568 Score = 73.8 bits (37), Expect = 6e-10 Identities = 157/197 (79%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| |||||||||||||||||||| || ||||||||||| || | || |||||| ||| Sbjct: 357 ttcaaaaccttcttcacaatcttctgttcttcaaccaagaaggccctgacgatcctctcc 298 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || ||| |||||| || || |||||||| | ||| ||||| ||||| |||||| Sbjct: 297 ctaacagcaactccagatagaacaccaccatatgcacgattcactgtcctctcgttcctt 238 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctggatcttcttc 399 | || |||||| |||||||| |||| ||| || | || ||||| || ||||| |||| Sbjct: 237 gccaaccttgaccttttgtactcagcaggtctcaaatgcggaatcccttggattctcttg 178 Query: 400 ccggtcacagggcactt 416 || || ||||||||||| Sbjct: 177 ccagtaacagggcactt 161
>emb|BX825773.1|CNS0A6BE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 547 Score = 73.8 bits (37), Expect = 6e-10 Identities = 157/197 (79%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| |||||||||||||||||||| || ||||||||||| || | || |||||| ||| Sbjct: 330 ttcaaaaccttcttcacaatcttctgttcttcaaccaagaaggccctgacgatcctctcc 271 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || ||| |||||| || || |||||||| | ||| ||||| ||||| |||||| Sbjct: 270 ctaacagcaactccagaaagaacaccaccatatgcacgattcactgtcctctcgttcctt 211 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctggatcttcttc 399 | || |||||| |||||||| |||| ||| || | || ||||| || ||||| |||| Sbjct: 210 gccaaccttgaccttttgtactcagcaggtctcaaatgcggaatcccttggattctcttg 151 Query: 400 ccggtcacagggcactt 416 || || ||||||||||| Sbjct: 150 ccagttacagggcactt 134
>emb|CR955009.1| Medicago truncatula chromosome 5 clone mth2-38i20, COMPLETE SEQUENCE Length = 123473 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 301 actccaccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgtat 360 ||||| ||||| | ||||||||||||||| ||||| |||| |||||||||||| ||||| Sbjct: 76427 actccgccataagcacggttcacagtcctacggtttctaggcagccttgatctcttgtac 76368 Query: 361 tcagtaggcct 371 || |||||||| Sbjct: 76367 tctgtaggcct 76357 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 226 accttcttcacaatcttctgctcctcaaccaagaaagc 263 ||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 76600 acctttttcacgatcttttgctcttcaaccaagaaagc 76563
>ref|NM_105630.2| Arabidopsis thaliana RPL34 (RIBOSOMAL PROTEIN L34); structural constituent of ribosome AT1G69620 (RPL34) mRNA, complete cds Length = 664 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| ||||||||||||||||| |||||||| || | ||| ||||| ||||| |||||| Sbjct: 385 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 326 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 325 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 266 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 389 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 265 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 216
>gb|AF349526.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At1g69620) mRNA, complete cds Length = 410 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| ||||||||||||||||| |||||||| || | ||| ||||| ||||| |||||| Sbjct: 323 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 264 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 263 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 204 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 389 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 203 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 154
>gb|AF327531.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At1g69620) mRNA, complete cds Length = 598 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| ||||||||||||||||| |||||||| || | ||| ||||| ||||| |||||| Sbjct: 384 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 325 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 324 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 265 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 389 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 264 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 215
>gb|AF446885.1|AF446885 Arabidopsis thaliana F24J1.23/F24J1.23 mRNA, complete cds Length = 360 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| ||||||||||||||||| |||||||| || | ||| ||||| ||||| |||||| Sbjct: 323 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 264 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 263 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 204 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 389 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 203 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 154
>gb|AY052720.1| Arabidopsis thaliana F24J1.23/F24J1.23 mRNA, complete cds Length = 539 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| ||||||||||||||||| |||||||| || | ||| ||||| ||||| |||||| Sbjct: 385 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 326 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 325 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 266 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 389 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 265 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 216
>emb|BX816733.1|CNS0ABV7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZB06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1297 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| ||||||||||||||||| |||||||| || | ||| ||||| ||||| |||||| Sbjct: 995 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 936 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcct 329 || || |||| ||||| | || |||||||| | ||||||||| ||||| Sbjct: 935 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcct 886
>emb|BX814797.1|CNS0AC1Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 525 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| ||||||||||||||||| |||||||| || | ||| ||||| ||||| |||||| Sbjct: 371 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 312 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 311 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 252 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 389 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 251 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 202
>emb|BX818608.1|CNS0AAXR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZG11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 577 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| ||||||||||||||||| |||||||| || | ||| ||||| ||||| |||||| Sbjct: 337 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 278 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 277 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 218 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 389 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 217 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 168
>gb|AF324703.1|AF324703 Arabidopsis thaliana T6C23.18 mRNA, complete cds Length = 599 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| ||||||||||||||||| |||||||| || | ||| ||||| ||||| |||||| Sbjct: 385 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 326 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 325 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 266 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 389 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 265 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 216
>gb|AY085544.1| Arabidopsis thaliana clone 1568 mRNA, complete sequence Length = 582 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| ||||||||||||||||| |||||||| || | ||| ||||| ||||| |||||| Sbjct: 385 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 326 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 325 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 266 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 389 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 265 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 216
>emb|BX814692.1|CNS0ADOU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 518 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 221 tcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttccc 280 ||||||| ||||| |||||||| ||||| || || | ||| || || ||||||||||||| Sbjct: 333 tcaacactttctttacaatcttttgctcttcgacaaggaatgcccgaatgatcctttccc 274 Query: 281 tcactgcagttccagagagcactccaccatagggacggttcacagtcct 329 ||||||||| ||||| | |||||||| || | |||||||||||||| Sbjct: 273 tcactgcagaaccagacaagactccaccgtatgctcggttcacagtcct 225
>emb|BX825772.1|CNS0A6BD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 544 Score = 65.9 bits (33), Expect = 1e-07 Identities = 156/197 (79%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttcc 279 ||||| |||||||| ||||||||||| || ||||||||||| || | || |||||| ||| Sbjct: 330 ttcaaaaccttctttacaatcttctgttcttcaaccaagaaggccctgacgatcctctcc 271 Query: 280 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 339 || || ||| |||||| || || |||||||| | ||| || || ||||| |||||| Sbjct: 270 ctaacagcaactccagatagaacaccaccatatgcacgatttactgtcctctcgttcctt 211 Query: 340 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctggatcttcttc 399 | || |||||| |||||||| |||| ||| || | || ||||| || ||||| ||||| Sbjct: 210 gccaaccttgaccttttgtactcagcaggactcaaatgcggaatcccttggattttcttg 151 Query: 400 ccggtcacagggcactt 416 || || ||||||||||| Sbjct: 150 ccagtaacagggcactt 134
>ref|XM_359481.1| Magnaporthe grisea 70-15 hypothetical protein (MG05296.4) partial mRNA Length = 351 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 225 caccttcttcacaatcttctgctcctcaaccaagaaagcacgga 268 ||||||||| ||||||||||||||||| | |||||||||||||| Sbjct: 315 caccttcttgacaatcttctgctcctcgatcaagaaagcacgga 272
>gb|AY849626.1| Magnaporthe grisea 60S ribosomal protein L34-B-like protein mRNA, complete cds Length = 683 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 225 caccttcttcacaatcttctgctcctcaaccaagaaagcacgga 268 ||||||||| ||||||||||||||||| | |||||||||||||| Sbjct: 375 caccttcttgacaatcttctgctcctcgatcaagaaagcacgga 332
>ref|NM_102452.3| Arabidopsis thaliana structural constituent of ribosome AT1G26880 mRNA, complete cds Length = 668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 219 tttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttc 278 ||||||||| |||||||||||||| ||||| || || | ||| || || ||||||||||| Sbjct: 372 tttcaacactttcttcacaatcttttgctcttcgacaaggaatgcccgaatgatcctttc 313 Query: 279 cctcactgcag 289 ||| ||||||| Sbjct: 312 cctgactgcag 302
>gb|AY117327.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At1g26880) mRNA, complete cds Length = 394 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 219 tttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttc 278 ||||||||| |||||||||||||| ||||| || || | ||| || || ||||||||||| Sbjct: 324 tttcaacactttcttcacaatcttttgctcttcgacaaggaatgcccgaatgatcctttc 265 Query: 279 cctcactgcag 289 ||| ||||||| Sbjct: 264 cctgactgcag 254
>gb|AY080712.1| Arabidopsis thaliana putative 60s ribosomal protein L34 (At1g26880) mRNA, complete cds Length = 653 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 219 tttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttc 278 ||||||||| |||||||||||||| ||||| || || | ||| || || ||||||||||| Sbjct: 345 tttcaacactttcttcacaatcttttgctcttcgacaaggaatgcccgaatgatcctttc 286 Query: 279 cctcactgcag 289 ||| ||||||| Sbjct: 285 cctgactgcag 275
>emb|BX814361.1|CNS0AEHP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZD07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 628 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 219 tttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttc 278 ||||||||| |||||||||||||| ||||| || || | ||| || || ||||||||||| Sbjct: 332 tttcaacactttcttcacaatcttttgctcttcgacaaggaatgcccgaatgatcctttc 273 Query: 279 cctcactgcag 289 ||| ||||||| Sbjct: 272 cctgactgcag 262
>gb|AY088495.1| Arabidopsis thaliana clone 7182 mRNA, complete sequence Length = 515 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 219 tttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgatcctttc 278 ||||||||| |||||||||||||| ||||| || || | ||| || || ||||||||||| Sbjct: 373 tttcaacactttcttcacaatcttttgctcttcgacaaggaatgcccgaatgatcctttc 314 Query: 279 cctcactgcag 289 ||| ||||||| Sbjct: 313 cctgactgcag 303
>gb|AY023446.1| Oryza sativa microsatellite MRG5771 containing (TCC)X8, genomic sequence Length = 224 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 500 gtggcatagctgtgcctcttccggtaggtcagacgctgcaccatgtttccgtcgtctccg 559 ||||||||||||||||| || ||||| ||||| ||||||||||| | |||||| | ||| Sbjct: 223 gtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccgtcgccgccg 164 Query: 560 ccgccg 565 |||||| Sbjct: 163 ccgccg 158
>gb|DQ066310.1| Ixodes scapularis isolate IS-6-12L-37 ribosomal protein L34 mRNA, complete cds Length = 360 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 234 cacaatcttctgctcctcaaccaagaaagcacggatgatcct 275 |||||||||||||||||||| || |||||| ||||||||||| Sbjct: 303 cacaatcttctgctcctcaatcaggaaagcccggatgatcct 262
>gb|U10047.1|PSU10047 Pisum sativum ribosomal protein L34 homolog (RPL34) mRNA, complete cds Length = 494 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 208 gtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacgg 267 ||||||||||| ||||| || ||||| ||||| || ||||| ||||| | ||||||||| Sbjct: 355 gtcttctgtatcttcaaaactttcttaacaattttttgctcttcaacaaggaaagcacga 296 Query: 268 atgatcctttccct 281 || ||||||||||| Sbjct: 295 ataatcctttccct 282 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Minus Query: 355 ttgtattcagtaggcctgaggtggggaataccctggatcttcttcccggtcacagggcac 414 |||||||||||||| || | || ||||| || |||||| |||| || || ||||| ||| Sbjct: 208 ttgtattcagtaggtctcaaatgtggaatcccttggatcctctttccagtaacaggacac 149 Query: 415 ttggggccgctcgccctcttctt 437 || || || |||||||||||||| Sbjct: 148 ttaggtccactcgccctcttctt 126
>dbj|AP000386.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MLD15 Length = 82430 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaa 260 ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 49190 ttcaaaaccttcttcacaatcttctgttcttcaaccaagaa 49230
>gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH097M21, complete sequence Length = 131063 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaa 260 ||||| ||||||||||||||||||||||| || |||||||| Sbjct: 36858 ttcaaaaccttcttcacaatcttctgctcttccaccaagaa 36818
>gb|AF378548.1|AF378548 Ophiostoma novo-ulmi clone 10 ribosomal protein L34-like protein mRNA, complete cds Length = 555 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 226 accttcttcacaatcttctgctcctcaa 253 |||||||||||||||||||||||||||| Sbjct: 316 accttcttcacaatcttctgctcctcaa 289
>gb|AC166313.2| Medicago truncatula chromosome 7 BAC clone mte1-4j13, complete sequence Length = 123373 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 487 ctggttggacttggtggcatagctgtgcctc 517 ||||||||| ||||||||||||||||||||| Sbjct: 26478 ctggttggatttggtggcatagctgtgcctc 26508
>gb|AC122544.1| Genomic sequence for Lycopersicon esculentum, clone L136C6, complete sequence Length = 121637 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 277 tccctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggtt 335 ||||| || ||| ||||||| ||||| || ||||| | ||||||||||||||||||||| Sbjct: 64174 tcccttacagcacttccagatagcacacctccataagcacggttcacagtcctgcggtt 64232
>gb|AC148762.2| Medicago truncatula chromosome 7 BAC clone mth2-15p5, complete sequence Length = 136116 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 487 ctggttggacttggtggcatagctgtgcctc 517 ||||||||| ||||||||||||||||||||| Sbjct: 84457 ctggttggatttggtggcatagctgtgcctc 84427
>gb|AC149288.1| Solanum demissum chromosome 5 clone PGEC446J10 map MAP_LOC, complete sequence Length = 102692 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 202 tccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaagaaa 261 ||||||| ||||| || ||||| ||||||||||||||||| || || |||||||| || Sbjct: 95543 tccttggctttctggatcttcaaaaccttcttcacaatcttttgttcttcaaccaaaaag 95602 Query: 262 gcacggatgatcct 275 || | ||||||||| Sbjct: 95603 gctctgatgatcct 95616 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 304 ccaccatagggacggttcacagtcct 329 |||||||||| ||||||||||||||| Sbjct: 95733 ccaccataggcacggttcacagtcct 95758
>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence Length = 81567 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 202 tccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaagaaa 261 ||||||| ||||| || ||||| ||||||||||||||||| || || |||||||| || Sbjct: 47927 tccttggctttctggatcttcaaaaccttcttcacaatcttttgttcttcaaccaaaaag 47986 Query: 262 gcacggatgatcct 275 || | ||||||||| Sbjct: 47987 gctctgatgatcct 48000 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 304 ccaccatagggacggttcacagtcct 329 |||||||||| ||||||||||||||| Sbjct: 48117 ccaccataggcacggttcacagtcct 48142
>ref|XM_384325.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04149.1) partial mRNA Length = 333 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaa 253 |||||||||||||| || |||||||||||||||| Sbjct: 302 ttcaacaccttcttgacgatcttctgctcctcaa 269
>gb|AC013289.11|AC013289 Arabidopsis thaliana chromosome 1 BAC T6C23 genomic sequence, complete sequence Length = 87148 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgat 272 ||||| ||||||||||||||||| |||||||| || | ||| ||||| ||||| Sbjct: 79858 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgat 79910
>gb|AC021046.2|AC021046 Arabidopsis thaliana chromosome 1 BAC F24J1 genomic sequence, complete sequence Length = 44430 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggatgat 272 ||||| ||||||||||||||||| |||||||| || | ||| ||||| ||||| Sbjct: 9792 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgat 9844
>gb|AC140033.3| Medicago truncatula clone mth2-24f11, complete sequence Length = 120384 Score = 48.1 bits (24), Expect = 0.032 Identities = 93/116 (80%) Strand = Plus / Minus Query: 244 tgctcctcaaccaagaaagcacggatgatcctttccctcactgcagttccagagagcact 303 ||||| |||||||||||||| | |||||| ||||||| || ||| |||||| | | | Sbjct: 90945 tgctcttcaaccaagaaagccctaatgatcatttccctaacagcacctccagacaaaatt 90886 Query: 304 ccaccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgta 359 |||||||| | || |||||| || |||||||| |||| | ||||||||| ||||| Sbjct: 90885 ccaccatacgcacagttcactgtgctgcggtttctaggtaaccttgatctcttgta 90830
>gb|AC140025.7| Medicago truncatula clone mth2-11i16, complete sequence Length = 130592 Score = 48.1 bits (24), Expect = 0.032 Identities = 93/116 (80%) Strand = Plus / Minus Query: 244 tgctcctcaaccaagaaagcacggatgatcctttccctcactgcagttccagagagcact 303 ||||| |||||||||||||| | |||||| ||||||| || ||| |||||| | | | Sbjct: 40398 tgctcttcaaccaagaaagccctaatgatcatttccctaacagcacctccagacaaaatt 40339 Query: 304 ccaccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgta 359 |||||||| | || |||||| || |||||||| |||| | ||||||||| ||||| Sbjct: 40338 ccaccatacgcacagttcactgtgctgcggtttctaggtaaccttgatctcttgta 40283
>gb|AY961475.1| Phytophthora infestans clone MY-23-A-10 ribosomal protein L34 mRNA, complete cds Length = 515 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 225 caccttcttcacaatcttctgctcctcaaccaagaaagcacgga 268 ||||||||| || |||||||||||||||| || |||||| |||| Sbjct: 354 caccttcttaacgatcttctgctcctcaatcaggaaagcgcgga 311 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 432 cttcttggtgtactggtacacgagcttgccacctggggtcttgac 476 ||||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 153 cttcttgatgtactgggcgacaagcttgccaccaggggtcttgac 109
>ref|XM_958025.1| Neurospora crassa OR74A hypothetical protein ( (AF378548) ribosomal protein L34-like protein [Ophiostoma novo-ulmi] ) (NCU07857.1) partial mRNA Length = 354 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 226 accttcttcacaatcttctgctcctcaaccaagaaagcacgga 268 |||||||| || |||||||||||||||| | ||||||||||| Sbjct: 314 accttcttgacgatcttctgctcctcaatgaggaaagcacgga 272
>ref|XM_328562.1| Neurospora crassa OR74A hypothetical protein ( (AF378548) ribosomal protein L34-like protein [Ophiostoma novo-ulmi] ) (NCU07857.1) partial mRNA Length = 354 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 226 accttcttcacaatcttctgctcctcaaccaagaaagcacgga 268 |||||||| || |||||||||||||||| | ||||||||||| Sbjct: 314 accttcttgacgatcttctgctcctcaatgaggaaagcacgga 272
>ref|XM_744346.1| Aspergillus fumigatus Af293 ribosomal protein L34 protein (Afu2g03040) partial mRNA Length = 579 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 226 accttcttcacaatcttctgctcctcaaccaagaaagcacgga 268 |||||||| || || ||||||||||||| || ||||||||||| Sbjct: 539 accttcttgacgattttctgctcctcaatcaggaaagcacgga 497
>dbj|AB226191.1| Aspergillus oryzae cDNA, contig sequence: AoEST3050 Length = 605 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 226 accttcttcacaatcttctgctcctcaaccaagaaagcacgga 268 |||||||| || |||||||||||||| | || ||||||||||| Sbjct: 388 accttcttgacgatcttctgctcctcgatcaggaaagcacgga 346
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 226 accttcttcacaatcttctgctcctcaaccaagaaagcacgga 268 |||||||| || |||||||||||||| | || ||||||||||| Sbjct: 1807889 accttcttgacgatcttctgctcctcgatcaggaaagcacgga 1807847
>gb|AY168761.1| Branchiostoma belcheri tsingtaunese ribosomal protein L34 mRNA, complete cds Length = 466 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 234 cacaatcttctgctcctcaaccaagaaagcacggatgatcctttccc 280 |||||||||||| ||||||| || ||||||||| | |||||||||| Sbjct: 336 cacaatcttctgttcctcaatcaggaaagcacgaacaatcctttccc 290
>dbj|AK062367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-H12, full insert sequence Length = 472 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 454 agcttgccacctggggtcttgacgacc 480 ||||||||||| ||||||||||||||| Sbjct: 145 agcttgccaccaggggtcttgacgacc 119 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 caccttcttcacaatcttctgctcctcaa 253 ||||||||| || |||||||||||||||| Sbjct: 368 caccttcttgacgatcttctgctcctcaa 340
>ref|XM_482187.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2928 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 atcaaatgtttcacaatctctg 43 |||||||||||||||||||||| Sbjct: 971 atcaaatgtttcacaatctctg 992
>ref|NM_032975.2| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 2, mRNA Length = 6072 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 359 attcagtaggcctgaggtgggg 380 |||||||||||||||||||||| Sbjct: 3986 attcagtaggcctgaggtgggg 3965
>ref|NM_001390.3| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 1, mRNA Length = 6166 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 359 attcagtaggcctgaggtgggg 380 |||||||||||||||||||||| Sbjct: 4080 attcagtaggcctgaggtgggg 4059
>ref|NM_032980.2| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 6, mRNA Length = 5221 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 359 attcagtaggcctgaggtgggg 380 |||||||||||||||||||||| Sbjct: 3135 attcagtaggcctgaggtgggg 3114
>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete sequence Length = 121915 Score = 44.1 bits (22), Expect = 0.49 Identities = 61/74 (82%) Strand = Plus / Minus Query: 202 tccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaagaaa 261 ||||||| ||||| || ||||| |||||||||||||| || || || |||||||| || Sbjct: 102756 tccttggctttctggatcttcaaaaccttcttcacaattttttgttcttcaaccaaaaag 102697 Query: 262 gcacggatgatcct 275 || | ||||||||| Sbjct: 102696 gctctgatgatcct 102683
>ref|XM_420489.1| PREDICTED: Gallus gallus similar to ribosomal protein L34; 60S ribosomal protein L34 (LOC422526), mRNA Length = 899 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaa 253 |||||||||||| ||||||||||||||||||| Sbjct: 826 ttcaacaccttcacaacaatcttctgctcctcaa 793
>ref|XM_657034.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4522.2), mRNA Length = 351 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 225 caccttcttcacaatcttctgctcctcaaccaagaaagcacg 266 ||||||||| || |||||||||||||| | || ||||||||| Sbjct: 315 caccttcttgacgatcttctgctcctcgatcaggaaagcacg 274
>emb|AL589923.11| Human DNA sequence from clone RP11-374O2 on chromosome 9 Contains part of a novel gene, complete sequence Length = 104685 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 272 tcctttccctcactgcagttcc 293 |||||||||||||||||||||| Sbjct: 71854 tcctttccctcactgcagttcc 71833
>ref|XM_792139.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9354-PA, isoform A (LOC592626), mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 238 atcttctgctcctcaaccaagaaagcacggatgatcct 275 |||||||||||||| | |||||||||||| | |||||| Sbjct: 335 atcttctgctcctcgatcaagaaagcacgcacgatcct 298
>gb|AC068506.10| Homo sapiens chromosome 18, clone RP11-96A15, complete sequence Length = 175885 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 359 attcagtaggcctgaggtgggg 380 |||||||||||||||||||||| Sbjct: 50528 attcagtaggcctgaggtgggg 50549
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 226 accttcttcacaatcttctgctcctcaaccaagaaagc 263 |||||||| || |||||||||||||| | ||||||||| Sbjct: 548765 accttcttgacgatcttctgctcctcgatcaagaaagc 548802
>gb|AC022166.7| Homo sapiens chromosome 16 clone RP11-525K10, complete sequence Length = 163998 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 201 gtccttggtcttctgtattttc 222 |||||||||||||||||||||| Sbjct: 161309 gtccttggtcttctgtattttc 161288
>emb|CR338843.2| Gallus gallus finished cDNA, clone ChEST69d4 Length = 1011 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaa 253 |||||||||||| ||||||||||||||||||| Sbjct: 938 ttcaacaccttcacaacaatcttctgctcctcaa 905
>gb|AC108483.3| Homo sapiens chromosome 16 clone RP11-170P24, complete sequence Length = 163976 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 gtccttggtcttctgtattttc 222 |||||||||||||||||||||| Sbjct: 115953 gtccttggtcttctgtattttc 115974
>emb|BX950575.1| Gallus gallus finished cDNA, clone ChEST566l24 Length = 665 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaa 253 |||||||||||| ||||||||||||||||||| Sbjct: 592 ttcaacaccttcacaacaatcttctgctcctcaa 559
>emb|BX932642.1| Gallus gallus finished cDNA, clone ChEST494g15 Length = 903 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaa 253 |||||||||||| ||||||||||||||||||| Sbjct: 827 ttcaacaccttcacaacaatcttctgctcctcaa 794
>emb|BX931507.1| Gallus gallus finished cDNA, clone ChEST391o10 Length = 866 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaa 253 |||||||||||| ||||||||||||||||||| Sbjct: 814 ttcaacaccttcacaacaatcttctgctcctcaa 781
>gb|AC009277.4|AC009277 Homo sapiens chromosome 18, clone RP11-481E24, complete sequence Length = 160401 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 359 attcagtaggcctgaggtgggg 380 |||||||||||||||||||||| Sbjct: 136617 attcagtaggcctgaggtgggg 136638
>gb|AY909414.1| Siniperca chuatsi clone C46 60S ribosomal protein L34 mRNA, partial cds Length = 294 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 238 atcttctgctcctcaaccaagaaagcacggatgatcct 275 |||||||||||||||| || ||||||||| ||||||| Sbjct: 205 atcttctgctcctcaatcaggaaagcacgcttgatcct 168
>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0671F11 Length = 159409 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 atcaaatgtttcacaatctctg 43 |||||||||||||||||||||| Sbjct: 59058 atcaaatgtttcacaatctctg 59037
>ref|NM_209371.1| Eremothecium gossypii ADL078Cp (ADL078C), mRNA Length = 381 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 226 accttcttcacaatcttctgctcctcaaccaagaaagc 263 |||||||| || |||||||||||||| | ||||||||| Sbjct: 311 accttcttgacgatcttctgctcctcgatcaagaaagc 274
>gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P11 genomic sequence, complete sequence Length = 85372 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 219 tttcaacaccttcttcacaatcttctgctc 248 ||||||||| |||||||||||||| ||||| Sbjct: 23592 tttcaacactttcttcacaatcttttgctc 23621
>dbj|AB209102.1| Homo sapiens mRNA for dystrobrevin alpha isoform 2 variant protein Length = 6015 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 359 attcagtaggcctgaggtgggg 380 |||||||||||||||||||||| Sbjct: 3954 attcagtaggcctgaggtgggg 3933
>emb|AL833285.1|HSM804598 Homo sapiens mRNA; cDNA DKFZp451O128 (from clone DKFZp451O128) Length = 6066 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 359 attcagtaggcctgaggtgggg 380 |||||||||||||||||||||| Sbjct: 3980 attcagtaggcctgaggtgggg 3959
>ref|XM_461331.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F24167g) partial mRNA Length = 369 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 ccacctggggtcttgacgacc 480 ||||||||||||||||||||| Sbjct: 83 ccacctggggtcttgacgacc 63
>emb|CR639118.2|CNS0ES44 Tetraodon nigroviridis full-length cDNA Length = 402 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 235 acaatcttctgctcctcaaccaagaaagcacggatgatcct 275 ||||||||||||||||||| || ||| || ||| ||||||| Sbjct: 319 acaatcttctgctcctcaatcaggaatgcgcggttgatcct 279
>emb|AL136096.7| Human DNA sequence from clone RP1-23D17 on chromosome 6q15-16.2 Contains the SPACA1 gene for sperm acrosome associated 1, part of the CNR1 gene for cannabinoid receptor 1 (brain) and a CpG island, complete sequence Length = 112212 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 cctttccctcactgcagttcc 293 ||||||||||||||||||||| Sbjct: 68141 cctttccctcactgcagttcc 68161
>emb|AL031622.1|HS740A11 Human DNA sequence from clone RP4-740A11 on chromosome Xq22.2-23 Contains part of the COL4A5 gene for type IV alpha 5 collagen (Alport syndrome), complete sequence Length = 104674 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 aaaaatattttccttgtttac 144 ||||||||||||||||||||| Sbjct: 97452 aaaaatattttccttgtttac 97472
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 ccacctggggtcttgacgacc 480 ||||||||||||||||||||| Sbjct: 1919187 ccacctggggtcttgacgacc 1919207
>emb|BX825288.1|CNS0A6GY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL27ZA02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 565 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaa 260 ||||| |||||||| ||| ||||||| || ||||||||||| Sbjct: 347 ttcaaaaccttcttaacagtcttctgttcttcaaccaagaa 307
>gb|AC097506.3| Homo sapiens BAC clone RP11-366P6 from 2, complete sequence Length = 43657 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 ccaacaaaaatattttccttgttta 143 |||| |||||||||||||||||||| Sbjct: 39526 ccaagaaaaatattttccttgttta 39550
>gb|AF401588.1| Ictalurus punctatus ribosomal protein L34 mRNA, complete cds Length = 408 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 235 acaatcttctgctcctcaaccaagaaagcacggatgatcct 275 ||||||||||||||||||| | ||||||||| ||||||| Sbjct: 324 acaatcttctgctcctcaataaggaaagcacgcttgatcct 284
>gb|AC024910.5| Homo sapiens chromosome 3 clone RP11-380A22 map 3p, complete sequence Length = 207606 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 attcagtaggcctgaggtggg 379 ||||||||||||||||||||| Sbjct: 5121 attcagtaggcctgaggtggg 5141
>gb|AC066580.4| Homo sapiens chromosome 3 clone RP11-109J15 map 3p, complete sequence Length = 149252 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 attcagtaggcctgaggtggg 379 ||||||||||||||||||||| Sbjct: 102085 attcagtaggcctgaggtggg 102065
>gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1004_F02 map C8, complete sequence Length = 116304 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 ccgtcgtctccgccgccggc 567 |||||||||||||||||||| Sbjct: 75977 ccgtcgtctccgccgccggc 75958
>gb|AC121137.18| Mus musculus chromosome 14, clone RP23-406K12, complete sequence Length = 164557 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 ggcagaaggatttcaagtac 73 |||||||||||||||||||| Sbjct: 92614 ggcagaaggatttcaagtac 92595
>ref|XM_381604.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01428.1) partial mRNA Length = 1878 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 gggacggttcacagtcctgc 331 |||||||||||||||||||| Sbjct: 55 gggacggttcacagtcctgc 74
>gb|AC012061.4| Homo sapiens BAC clone CTD-2052D1 from 7, complete sequence Length = 81670 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 aaaaatattttccttgttta 143 |||||||||||||||||||| Sbjct: 43436 aaaaatattttccttgttta 43455
>emb|AL445240.8| Human DNA sequence from clone RP11-242A15 on chromosome 10 Contains the 5' end of a novel gene, complete sequence Length = 152898 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 aacaaaaatattttccttgt 140 |||||||||||||||||||| Sbjct: 143936 aacaaaaatattttccttgt 143917
>emb|AL359208.14| Human DNA sequence from clone RP11-320N6 on chromosome 13, complete sequence Length = 139649 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 attcagtaggcctgaggtgg 378 |||||||||||||||||||| Sbjct: 57962 attcagtaggcctgaggtgg 57943
>emb|AL157766.9| Human DNA sequence from clone RP11-40O20 on chromosome 13q12.11-12.2 Contains the 3' end of the SGCG gene for sarcoglycan gamma (35kD dystrophin-associated glycoprotein), the SACS gene for spastic ataxia of Charlevoix-Saguenay (sacsin), a ribosomal protein large P1 (RPLP1) pseudogene and a CpG island, complete sequence Length = 92693 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ccaccaacaaaaatattttc 135 |||||||||||||||||||| Sbjct: 29408 ccaccaacaaaaatattttc 29427
>emb|AL391069.11| Human DNA sequence from clone RP11-126K1 on chromosome 1 Contains the 3' end of the PSMD4 gene for proteasome (prosome, macropain) 26S subunit non-ATPase 4, two novel genes, gene KIAA1441 (FLJ13043), the PIK4CB genen for phosphatidylinositol 4-kinase catalytic beta polypeptide, the RFX5 gene for regulatory factor X 5 (influences HLA class II expression), the SELENBP1 gene for selenium binding protein 1 and two CpG islands, complete sequence Length = 121357 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 ctgtattttcaacaccttcttcac 236 |||||||||||||| ||||||||| Sbjct: 84057 ctgtattttcaacagcttcttcac 84034
>emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on chromosome 11 Contains a novel gene, the Tob1 gene for transducer of ErbB-2.1, the gene for a novel protein (AY100450) (WFIKKN-like growth and differentiation factor-associated serum protein 1) (Gasp1), a novel gene, the gene for a novel protein (3300001P08Rik) (Luc7a) and one CpG island, complete sequence Length = 188962 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 ggcagaaggatttcaagtac 73 |||||||||||||||||||| Sbjct: 102590 ggcagaaggatttcaagtac 102571
>gb|AC091175.11| Homo sapiens chromosome 8, clone RP11-146E23, complete sequence Length = 84551 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 aaatattttccttgtttaca 145 |||||||||||||||||||| Sbjct: 13826 aaatattttccttgtttaca 13845
>gb|AC118480.3| Homo sapiens BAC clone RP11-393K13 from 4, complete sequence Length = 108490 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 tattttcaacaccttcttca 235 |||||||||||||||||||| Sbjct: 74505 tattttcaacaccttcttca 74524
>gb|AC025479.8| Homo sapiens chromosome 8, clone RP11-358J8, complete sequence Length = 176647 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 tttcaaacagattactttga 191 |||||||||||||||||||| Sbjct: 38735 tttcaaacagattactttga 38754
>gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0014J14, complete sequence Length = 191397 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 ccgtcgtctccgccgccggc 567 |||||||||||||||||||| Sbjct: 44717 ccgtcgtctccgccgccggc 44698
>gb|AC093876.3| Homo sapiens BAC clone RP11-631I21 from 4, complete sequence Length = 183972 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aaaaatattttccttgttta 143 |||||||||||||||||||| Sbjct: 66451 aaaaatattttccttgttta 66432
>gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, complete sequence Length = 184520 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ccaccaacaaaaatattttc 135 |||||||||||||||||||| Sbjct: 65418 ccaccaacaaaaatattttc 65437
>ref|XM_683014.1| PREDICTED: Danio rerio similar to superkiller viralicidic activity 2-like (LOC559653), mRNA Length = 3231 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ttctgctcctcaaccaagaa 260 |||||||||||||||||||| Sbjct: 35 ttctgctcctcaaccaagaa 54
>gb|AC068399.9| Homo sapiens chromosome 8, clone RP11-809K10, complete sequence Length = 195367 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 tttcaaacagattactttga 191 |||||||||||||||||||| Sbjct: 179290 tttcaaacagattactttga 179309
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 ccgtcgtctccgccgccggc 567 |||||||||||||||||||| Sbjct: 7219359 ccgtcgtctccgccgccggc 7219340
>gb|AF287343.1|AF287343 Fuchsia hybrid cultivar Qiu 94208 ribosomal protein S10 mRNA, partial cds; nuclear gene for mitochondrial product Length = 407 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 ccttcttcacaatcttctgctcct 250 |||||||||| ||||||||||||| Sbjct: 232 ccttcttcaccatcttctgctcct 209
>gb|AC136977.4| Homo sapiens 12 BAC RP11-439H13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 33795 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 aaaaatattttccttgttta 143 |||||||||||||||||||| Sbjct: 15867 aaaaatattttccttgttta 15886
>gb|AC161614.4| Pan troglodytes BAC clone CH251-575E11 from chromosome unknown, complete sequence Length = 172771 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 ctgtattttcaacaccttcttcac 236 |||||||||||||| ||||||||| Sbjct: 138439 ctgtattttcaacagcttcttcac 138462
>dbj|AP005366.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB565H3, complete sequence Length = 101002 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 tttcaaacagattactttga 191 |||||||||||||||||||| Sbjct: 54495 tttcaaacagattactttga 54476
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 ccgtcgtctccgccgccggc 567 |||||||||||||||||||| Sbjct: 7222655 ccgtcgtctccgccgccggc 7222636
>gb|AF061604.1|AF061604 Pichia angusta ubiquitin-conjugating enzyme homolog peroxin 4 (PEX4) gene, complete cds Length = 1507 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 220 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagc 263 |||||||||||||| || ||||| || || |||| ||||||||| Sbjct: 1122 ttcaacaccttcttgacgatcttttgttcttcaatcaagaaagc 1165
>emb|BX510319.11| Zebrafish DNA sequence from clone CH211-221E5 in linkage group 8, complete sequence Length = 113234 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 caaaaatattttccttgttt 142 |||||||||||||||||||| Sbjct: 17524 caaaaatattttccttgttt 17505
>emb|AL732615.15| Mouse DNA sequence from clone RP23-190O8 on chromosome 4, complete sequence Length = 189819 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ttcccggtcacagggcactt 416 |||||||||||||||||||| Sbjct: 110565 ttcccggtcacagggcactt 110546 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,886,406 Number of Sequences: 3902068 Number of extensions: 5886406 Number of successful extensions: 125271 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 124703 Number of HSP's gapped (non-prelim): 538 length of query: 567 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 544 effective length of database: 17,143,297,704 effective search space: 9325953950976 effective search space used: 9325953950976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
