| Clone Name | rbags13p21 |
|---|---|
| Clone Library Name | barley_pub |
>UMP3_ARATH (Q9LEV3) Protein At5g10860, mitochondrial precursor| Length = 206 Score = 91.7 bits (226), Expect = 7e-19 Identities = 45/57 (78%), Positives = 50/57 (87%) Frame = -3 Query: 426 RVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVSEHKEELNRLNAFIQGGY 256 +VL+AMQLMTD RIRHIPVI M+GMVSIGDVVRAVV EH+EEL RLNA+IQGGY Sbjct: 150 KVLRAMQLMTDNRIRHIPVIKDKGMIGMVSIGDVVRAVVHEHREELQRLNAYIQGGY 206
>YR33_THEPE (P15889) Hypothetical 33.4 kDa protein in ribosomal RNA operon| Length = 300 Score = 38.1 bits (87), Expect = 0.009 Identities = 15/40 (37%), Positives = 30/40 (75%) Frame = -3 Query: 423 VLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVSE 304 + + M++M+++RIR +P++SG ++ G+V+I DV+ V E Sbjct: 165 LFEGMRVMSERRIRRLPLVSGEELRGIVTIKDVLSYVSRE 204 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = -3 Query: 426 RVLQAMQLMTDKRIRHIPVISGAQMM-GMVSIGDVV 322 RVL + M R+RH+P++ ++ GMVS D+V Sbjct: 22 RVLDVLVAMGRNRVRHVPLVDERGVLKGMVSARDLV 57
>YBP3_ACIAM (P32987) Hypothetical 17.7 kDa protein in bps2 3'region (ORF3)| Length = 164 Score = 35.4 bits (80), Expect = 0.058 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Frame = -3 Query: 423 VLQAMQLMTDKRIRHIPVI-SGAQMMGMVSIGDVVRAVVSEHKEELNRLNAFIQG 262 V A+ +M + RH+P+I S ++ G+VSI D+ RA++ H + + ++G Sbjct: 85 VTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFGKPAEEVKG 139
>YHCV_BACSU (P54606) Hypothetical protein yhcV| Length = 140 Score = 30.4 bits (67), Expect = 1.9 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = -3 Query: 414 AMQLMTDKRIRHIPVISGAQMMGMVSIGDV 325 A QLM +IR +P++ ++G+V++GD+ Sbjct: 88 ASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117
>CSAG2_HUMAN (Q9Y5P2) Chondrosarcoma-associated protein 2 (Taxol| resistant-associated protein 3) (TRAG-3) Length = 127 Score = 29.3 bits (64), Expect = 4.1 Identities = 22/74 (29%), Positives = 28/74 (37%) Frame = +2 Query: 128 QVQQPVSTKKHGLFRHHHPGRYCRVHSKGRPANATRRGPGNP*YPPWMKALSRFSSSLCS 307 QV + + GL + R S P RRG G P +ALS+F L Sbjct: 53 QVDWSILLRDAGLVKMSRKPRASSPLSNNHPPTPKRRGSGRHPLNPGPEALSKFPRQL-- 110 Query: 308 LTTARTTSPIETIP 349 R PIE +P Sbjct: 111 ---GREKGPIEEVP 121
>Y653_METJA (Q58069) Hypothetical protein MJ0653| Length = 194 Score = 29.3 bits (64), Expect = 4.1 Identities = 10/35 (28%), Positives = 23/35 (65%) Frame = -3 Query: 423 VLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVVR 319 + +A ++M I+ +PV+ +++G+V+ D+VR Sbjct: 91 ITEAAKIMATHGIKRLPVVKDGELVGIVTQSDIVR 125
>PPAC_THEMA (Q9WZ56) Probable manganese-dependent inorganic pyrophosphatase (EC| 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 548 Score = 29.3 bits (64), Expect = 4.1 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = -3 Query: 405 LMTDKRIRHIPVISGAQMMGMVSIGDVVRAVVSEHKEE 292 LM + I+++PV+S +M+G+V+ ++ R V K E Sbjct: 96 LMESRGIKNVPVVSKEKMIGVVTESNIARVYVRRLKIE 133
>ACE2_SCHPO (O14258) Metallothionein expression activator| Length = 533 Score = 28.9 bits (63), Expect = 5.4 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +2 Query: 155 KHGLFRHHHPGRYCRVHSKGRP 220 K G RHH R+ R+H GRP Sbjct: 479 KAGFVRHHDLKRHLRIHENGRP 500
>K502_ACTCH (P43394) Fruit protein PKIWI502| Length = 317 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = +2 Query: 32 MVYTLQXTSTRRRARPRKYTLNKRENITHTQIQVQQPVSTKKHGLFRHHHPGRYCRVHS 208 M TL S R + R +L +++H +PV+ +H R+HH GR V S Sbjct: 1 MSITLSRPSLSRPSLSRHPSLTLHSSLSHAPPH-HRPVAFLRHPTLRYHHHGRLLSVAS 58
>PA22_ERIMA (P24294) Phospholipase A2 isozyme PLA-2 (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) Length = 121 Score = 28.5 bits (62), Expect = 7.1 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 149 TKKHGLFRHHHPGRYCRVHSKGRPANATRR 238 T GLF + + G YC + KG+P +AT R Sbjct: 13 TGTFGLFSYVYYGCYCGLGGKGKPLDATDR 42
>PA2A_AGKCA (Q7LZQ4) Phospholipase A2, acidic (EC 3.1.1.4) (Phosphatidylcholine| 2-acylhydrolase) Length = 124 Score = 28.5 bits (62), Expect = 7.1 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 152 KKHGLFRHHHPGRYCRVHSKGRPANATRR 238 KK G+F + + G YC +GRP +AT R Sbjct: 14 KKSGMFWYSNYGCYCGWGGQGRPQDATDR 42
>PA21B_AGKHP (P14418) Phospholipase A2, acidic (EC 3.1.1.4) (Phosphatidylcholine| 2-acylhydrolase) Length = 124 Score = 28.5 bits (62), Expect = 7.1 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 152 KKHGLFRHHHPGRYCRVHSKGRPANATRR 238 KK G+F + + G YC +GRP +AT R Sbjct: 14 KKSGMFWYSNYGCYCGWGGQGRPQDATDR 42
>WECC_SHIFL (P67067) UDP-N-acetyl-D-mannosamine dehydrogenase (EC 1.1.1.-)| (UDP-ManNAc dehydrogenase) Length = 420 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +1 Query: 265 LDEGVEPVQLLLVLADHRAHDVTNRDHPHHLCAADHRNV 381 LDE + +L++L DH V N D+ H D + V Sbjct: 380 LDEALATADVLVMLVDHSQFKVINGDNVHQQYVVDAKGV 418
>WECC_ECOLI (P27829) UDP-N-acetyl-D-mannosamine dehydrogenase (EC 1.1.1.-)| (UDP-ManNAc dehydrogenase) Length = 420 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +1 Query: 265 LDEGVEPVQLLLVLADHRAHDVTNRDHPHHLCAADHRNV 381 LDE + +L++L DH V N D+ H D + V Sbjct: 380 LDEALATADVLVMLVDHSQFKVINGDNVHQQYVVDAKGV 418
>WECC_ECO57 (P67066) UDP-N-acetyl-D-mannosamine dehydrogenase (EC 1.1.1.-)| (UDP-ManNAc dehydrogenase) Length = 420 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +1 Query: 265 LDEGVEPVQLLLVLADHRAHDVTNRDHPHHLCAADHRNV 381 LDE + +L++L DH V N D+ H D + V Sbjct: 380 LDEALATADVLVMLVDHSQFKVINGDNVHQQYVVDAKGV 418
>KING1_ARATH (Q8LBB2) SNF1-related protein kinase regulatory gamma subunit 1| (AKIN gamma1) (AKING1) Length = 424 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 2/35 (5%) Frame = -3 Query: 423 VLQAMQLMTDKRIRHIPVI--SGAQMMGMVSIGDV 325 VLQA +LM KRI IPVI + + +G +S+ DV Sbjct: 277 VLQAFKLMRRKRIGGIPVIERNSEKPVGNISLRDV 311
>CF182_RAT (Q6AXZ4) Protein C6orf182 homolog| Length = 430 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +2 Query: 65 RRARPRKYTLNKRENITHTQIQVQQPVSTKKHGLFRHHHPGRYCRVHSKGRP 220 R+ P+K KRE HT + + P S ++ FR R HS G P Sbjct: 239 RKKLPKKTNCLKREPPQHTDCRFRGPASERERPPFRMTSSAR-AEPHSSGEP 289 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,271,847 Number of Sequences: 219361 Number of extensions: 842799 Number of successful extensions: 2622 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2545 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2621 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)