| Clone Name | rbags14e01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479565.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2039 Score = 204 bits (103), Expect = 2e-49 Identities = 202/235 (85%) Strand = Plus / Minus Query: 297 aagatgcaacctcgatggcgcttccgagcggccatgctgcttcaacgaacgcgtcactgt 356 ||||||||||||| ||||| ||||| || |||||||||||||| || ||||||| |||| Sbjct: 1732 aagatgcaacctcaatggcacttcccagtggccatgctgcttccacaaacgcgttgctgt 1673 Query: 357 aaggaaccttctttaccaatgtcatctcctgttggggatcaacaccaaatccatccacaa 416 |||| || ||||||||||| |||||||| || || | | ||||||||||||||||||||| Sbjct: 1672 aagggactttctttaccaaggtcatctcttggtgagaaccaacaccaaatccatccacaa 1613 Query: 417 gcagggtgtactggtaaacaagatccatgcaaatgtatggaacgttatccttctggacag 476 | | ||||||||||||||| ||||||||||| || ||||||| ||||||||| |||||| Sbjct: 1612 gtaaggtgtactggtaaacgagatccatgcagatatatggaatgttatccttttggacac 1553 Query: 477 cagggtagctagattgggcgtcgttcacgttcaatttacaagcacgcttggcagc 531 |||||||| || || |||||| |||| ||| || ||||| |||||||||||||| Sbjct: 1552 cagggtaggcagcttcggcgtccttcaagtttaacttacatgcacgcttggcagc 1498
>dbj|AK066262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059O11, full insert sequence Length = 2038 Score = 196 bits (99), Expect = 6e-47 Identities = 201/235 (85%) Strand = Plus / Minus Query: 297 aagatgcaacctcgatggcgcttccgagcggccatgctgcttcaacgaacgcgtcactgt 356 |||||||||||| ||||| ||||| || |||||||||||||| || ||||||| |||| Sbjct: 1731 aagatgcaacctaaatggcacttcccagtggccatgctgcttccacaaacgcgttgctgt 1672 Query: 357 aaggaaccttctttaccaatgtcatctcctgttggggatcaacaccaaatccatccacaa 416 |||| || ||||||||||| |||||||| || || | | ||||||||||||||||||||| Sbjct: 1671 aagggactttctttaccaaggtcatctcttggtgagaaccaacaccaaatccatccacaa 1612 Query: 417 gcagggtgtactggtaaacaagatccatgcaaatgtatggaacgttatccttctggacag 476 | | ||||||||||||||| ||||||||||| || ||||||| ||||||||| |||||| Sbjct: 1611 gtaaggtgtactggtaaacgagatccatgcagatatatggaatgttatccttttggacac 1552 Query: 477 cagggtagctagattgggcgtcgttcacgttcaatttacaagcacgcttggcagc 531 |||||||| || || |||||| |||| ||| || ||||| |||||||||||||| Sbjct: 1551 cagggtaggcagcttcggcgtccttcaagtttaacttacatgcacgcttggcagc 1497
>ref|NM_187539.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1470 Score = 157 bits (79), Expect = 5e-35 Identities = 154/179 (86%) Strand = Plus / Minus Query: 289 ctatgatgaagatgcaacctcgatggcgcttccgagcggccatgctgcttcaacgaacgc 348 ||||||||||||||||||||| ||||| || || || ||||||||||||||||| || | Sbjct: 1470 ctatgatgaagatgcaacctcaatggcactaccaaggggccatgctgcttcaacaaatga 1411 Query: 349 gtcactgtaaggaaccttctttaccaatgtcatctcctgttggggatcaacaccaaatcc 408 | || ||||| ||||||||||||||||| || ||||| | |||||| ||||||||||| Sbjct: 1410 attgctataaggcaccttctttaccaatgtaatatcctggtagggatccacaccaaatcc 1351 Query: 409 atccacaagcagggtgtactggtaaacaagatccatgcaaatgtatggaacgttatcct 467 ||||||||| | ||||||||||| || ||||||||||||| |||||||||||| |||| Sbjct: 1350 atccacaagtaacgtgtactggtagactagatccatgcaaaggtatggaacgttctcct 1292
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 400 accaaatccatccacaagcagggtgtactggtaaacaagatccatgcaaatgtatggaac 459 |||||||||||||||||| | ||||||||||||||| ||||||||||| || ||||||| Sbjct: 28913172 accaaatccatccacaagtaaggtgtactggtaaacgagatccatgcagatatatggaat 28913113 Query: 460 gttatccttctggacagcagggtagctagattgggcgtcgttcacgttcaatttacaagc 519 ||||||||| |||||| |||||||| || || |||||| |||| ||| || ||||| || Sbjct: 28913112 gttatccttttggacaccagggtaggcagcttcggcgtccttcaagtttaacttacatgc 28913053 Query: 520 acgcttggcagc 531 |||||||||||| Sbjct: 28913052 acgcttggcagc 28913041 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 297 aagatgcaacctcgatggcgcttccgagcggccatgctgcttcaacgaacgcgtcactgt 356 ||||||||||||| ||||| ||||| || |||||||||||||| || ||||||| |||| Sbjct: 28913367 aagatgcaacctcaatggcacttcccagtggccatgctgcttccacaaacgcgttgctgt 28913308 Query: 357 aaggaaccttctttaccaatgtcatctc 384 |||| || ||||||||||| |||||||| Sbjct: 28913307 aagggactttctttaccaaggtcatctc 28913280
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 400 accaaatccatccacaagcagggtgtactggtaaacaagatccatgcaaatgtatggaac 459 |||||||||||||||||| | ||||||||||||||| ||||||||||| || ||||||| Sbjct: 30709 accaaatccatccacaagtaaggtgtactggtaaacgagatccatgcagatatatggaat 30650 Query: 460 gttatccttctggacagcagggtagctagattgggcgtcgttcacgttcaatttacaagc 519 ||||||||| |||||| |||||||| || || |||||| |||| ||| || ||||| || Sbjct: 30649 gttatccttttggacaccagggtaggcagcttcggcgtccttcaagtttaacttacatgc 30590 Query: 520 acgcttggcagc 531 |||||||||||| Sbjct: 30589 acgcttggcagc 30578 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 297 aagatgcaacctcgatggcgcttccgagcggccatgctgcttcaacgaacgcgtcactgt 356 ||||||||||||| ||||| ||||| || |||||||||||||| || ||||||| |||| Sbjct: 30904 aagatgcaacctcaatggcacttcccagtggccatgctgcttccacaaacgcgttgctgt 30845 Query: 357 aaggaaccttctttaccaatgtcatctc 384 |||| || ||||||||||| |||||||| Sbjct: 30844 aagggactttctttaccaaggtcatctc 30817
>gb|BT017796.1| Zea mays clone EL01N0505C10.c mRNA sequence Length = 1131 Score = 123 bits (62), Expect = 7e-25 Identities = 155/186 (83%) Strand = Plus / Minus Query: 296 gaagatgcaacctcgatggcgcttccgagcggccatgctgcttcaacgaacgcgtcactg 355 |||||||||||||||||||| || || ||||||||||| ||||| ||| | ||||| ||| Sbjct: 851 gaagatgcaacctcgatggcactgccaagcggccatgcggcttcgacgtaggcgtcgctg 792 Query: 356 taaggaaccttctttaccaatgtcatctcctgttggggatcaacaccaaatccatccaca 415 ||||| ||||||||||| || |||||||| || | |||||||| || ||||| ||||| Sbjct: 791 taagggaccttctttactaaggtcatctcgtggtccggatcaacgccgaatccttccacg 732 Query: 416 agcagggtgtactggtaaacaagatccatgcaaatgtatggaacgttatccttctggaca 475 || | |||||||| ||||| || |||||||| || ||||||| | |||||||||| ||| Sbjct: 731 agtaatgtgtactgataaacgaggtccatgcagatatatggaatgctatccttctgtaca 672 Query: 476 gcaggg 481 ||||| Sbjct: 671 ccaggg 666
>gb|AF358764.1| Oryza sativa clone Osh47 putative apyrase mRNA, partial cds Length = 319 Score = 113 bits (57), Expect = 7e-22 Identities = 111/129 (86%) Strand = Plus / Minus Query: 289 ctatgatgaagatgcaacctcgatggcgcttccgagcggccatgctgcttcaacgaacgc 348 ||||||||||||||||||||| ||||| || || || ||||||||||||||||| || | Sbjct: 137 ctatgatgaagatgcaacctcaatggcactaccaaggggccatgctgcttcaacaaatga 78 Query: 349 gtcactgtaaggaaccttctttaccaatgtcatctcctgttggggatcaacaccaaatcc 408 | || ||||| ||||||||||||||||| || ||||| | |||||| ||||||||||| Sbjct: 77 attgctataaggcaccttctttaccaatgtaatatcctggtagggatccacaccaaatcc 18 Query: 409 atccacaag 417 ||||||||| Sbjct: 17 atccacaag 9
>gb|AY110882.1| Zea mays CL25429_1 mRNA sequence Length = 1072 Score = 89.7 bits (45), Expect = 1e-14 Identities = 154/192 (80%) Strand = Plus / Plus Query: 289 ctatgatgaagatgcaacctcgatggcgcttccgagcggccatgctgcttcaacgaacgc 348 |||||||||| |||| ||||||||||| || || || |||||||| ||||| || | || Sbjct: 326 ctatgatgaaaatgccacctcgatggcactgccaagaggccatgcggcttcgacatatgc 385 Query: 349 gtcactgtaaggaaccttctttaccaatgtcatctcctgttggggatcaacaccaaatcc 408 ||||||| || |||||||||||||| |||||||| || | |||||||| ||| Sbjct: 386 accactgtaggggaccttctttaccaaggtcatctcatggtctggatcaacgnnnnntcc 445 Query: 409 atccacaagcagggtgtactggtaaacaagatccatgcaaatgtatggaacgttatcctt 468 | |||||| | |||||||| |||||||| |||||||| || ||||||| ||||||||| Sbjct: 446 gtgcacaagtaatgtgtactgataaacaaggtccatgcagatatatggaatgttatcctt 505 Query: 469 ctggacagcagg 480 |||||| |||| Sbjct: 506 ttggacaccagg 517
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 289 ctatgatgaagatgcaacctcgatggcgcttccgagcggccatgctgcttcaacgaacgc 348 ||||||||||||||||||||| ||||| || || || ||||||||||||||||| || | Sbjct: 11995184 ctatgatgaagatgcaacctcaatggcactaccaaggggccatgctgcttcaacaaatga 11995243 Query: 349 gtcactgtaaggaaccttctttaccaatgtcatctcctgttggggatcaacacc 402 | || ||||| ||||||||||||||||| || ||||| | |||||| ||||| Sbjct: 11995244 attgctataaggcaccttctttaccaatgtaatatcctggtagggatccacacc 11995297 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 400 accaaatccatccacaagcagggtgtactggtaaacaagatccatgcaaatgtatggaac 459 |||||||||||||||||| | ||||||||||| || ||||||||||||| ||||||||| Sbjct: 11995383 accaaatccatccacaagtaacgtgtactggtagactagatccatgcaaaggtatggaac 11995442 Query: 460 gttatcct 467 ||| |||| Sbjct: 11995443 gttctcct 11995450
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 289 ctatgatgaagatgcaacctcgatggcgcttccgagcggccatgctgcttcaacgaacgc 348 ||||||||||||||||||||| ||||| || || || ||||||||||||||||| || | Sbjct: 11991947 ctatgatgaagatgcaacctcaatggcactaccaaggggccatgctgcttcaacaaatga 11992006 Query: 349 gtcactgtaaggaaccttctttaccaatgtcatctcctgttggggatcaacacc 402 | || ||||| ||||||||||||||||| || ||||| | |||||| ||||| Sbjct: 11992007 attgctataaggcaccttctttaccaatgtaatatcctggtagggatccacacc 11992060 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 400 accaaatccatccacaagcagggtgtactggtaaacaagatccatgcaaatgtatggaac 459 |||||||||||||||||| | ||||||||||| || ||||||||||||| ||||||||| Sbjct: 11992146 accaaatccatccacaagtaacgtgtactggtagactagatccatgcaaaggtatggaac 11992205 Query: 460 gttatcct 467 ||| |||| Sbjct: 11992206 gttctcct 11992213
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 289 ctatgatgaagatgcaacctcgatggcgcttccgagcggccatgctgcttcaacgaacgc 348 ||||||||||||||||||||| ||||| || || || ||||||||||||||||| || | Sbjct: 15764 ctatgatgaagatgcaacctcaatggcactaccaaggggccatgctgcttcaacaaatga 15823 Query: 349 gtcactgtaaggaaccttctttaccaatgtcatctcctgttggggatcaacacc 402 | || ||||| ||||||||||||||||| || ||||| | |||||| ||||| Sbjct: 15824 attgctataaggcaccttctttaccaatgtaatatcctggtagggatccacacc 15877 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 400 accaaatccatccacaagcagggtgtactggtaaacaagatccatgcaaatgtatggaac 459 |||||||||||||||||| | ||||||||||| || ||||||||||||| ||||||||| Sbjct: 15963 accaaatccatccacaagtaacgtgtactggtagactagatccatgcaaaggtatggaac 16022 Query: 460 gttatcct 467 ||| |||| Sbjct: 16023 gttctcct 16030
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 289 ctatgatgaagatgcaacctcgatggcgcttccgagcggccatgctgcttcaacgaacgc 348 ||||||||||||||||||||| ||||| || || || ||||||||||||||||| || | Sbjct: 96446 ctatgatgaagatgcaacctcaatggcactaccaaggggccatgctgcttcaacaaatga 96505 Query: 349 gtcactgtaaggaaccttctttaccaatgtcatctcctgttggggatcaacacc 402 | || ||||| ||||||||||||||||| || ||||| | |||||| ||||| Sbjct: 96506 attgctataaggcaccttctttaccaatgtaatatcctggtagggatccacacc 96559 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 400 accaaatccatccacaagcagggtgtactggtaaacaagatccatgcaaatgtatggaac 459 |||||||||||||||||| | ||||||||||| || ||||||||||||| ||||||||| Sbjct: 96645 accaaatccatccacaagtaacgtgtactggtagactagatccatgcaaaggtatggaac 96704 Query: 460 gttatcct 467 ||| |||| Sbjct: 96705 gttctcct 96712
>dbj|AB071370.1| Pisum sativum mRNA for PsAPY2, complete cds Length = 2211 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 401 ccaaatccatccacaagcagggtgtactggtaaacaagatccatgcaaatgtatggaa 458 ||||| ||||| ||||||| ||| ||||||||||||||||||||||||| ||||||| Sbjct: 1612 ccaaacccatcaacaagcaaggtatactggtaaacaagatccatgcaaagatatggaa 1555 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 311 atggcgcttccgagcggccatgctgcttcaac 342 ||||||||||| |||||||| ||||| ||||| Sbjct: 1702 atggcgcttcctagcggccaagctgcctcaac 1671
>gb|AC123593.1| Genomic sequence for Medicago truncatula, clone MTABa0052G10, complete sequence Length = 100769 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 400 accaaatccatccacaagcagggtgtactggtaaacaagatccatgcaaatgtatggaa 458 |||||| ||||| ||||||| || |||||||| |||||||||||||||| ||||||| Sbjct: 68576 accaaacccatcaacaagcaatgtatactggtatacaagatccatgcaaagatatggaa 68518
>gb|AY180382.1| Medicago truncatula apyrase-like protein (APY2) mRNA, complete cds Length = 2172 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 401 ccaaatccatccacaagcagggtgtactggtaaacaagatccatgcaaatgtatggaa 458 ||||| ||||| ||||||| || |||||||| |||||||||||||||| ||||||| Sbjct: 1637 ccaaacccatcaacaagcaatgtatactggtatacaagatccatgcaaagatatggaa 1580
>dbj|AB196770.1| Vigna sinensis VsNTPase2 mRNA for apyrase, complete cds Length = 2152 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 401 ccaaatccatccacaagcagggtgtactggtaaacaagatccatgcaaa 449 ||||| ||||| |||||||| || |||||||| || ||||||||||||| Sbjct: 1675 ccaaacccatcaacaagcagtgtatactggtatacgagatccatgcaaa 1627
>gb|AF156780.1|AF156780 Lotus japonicus nod factor binding lectin-nucleotide phosphohydrolase (LNP) mRNA, complete cds Length = 1489 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Minus Query: 392 ggatcaacaccaaatccatccacaagcagggtgtactggtaaacaagatcca 443 ||||||| |||||||||||| ||||||| |||||| ||| |||||||||| Sbjct: 1280 ggatcaagaccaaatccatcaacaagcaatgtgtacacgtagacaagatcca 1229
>gb|AC154048.1| Drosophila melanogaster clone BACR29A04, complete sequence Length = 159930 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 549 gtttgaccttggcaacggccgc 570 |||||||||||||||||||||| Sbjct: 61098 gtttgaccttggcaacggccgc 61077
>emb|CR749338.1| Homo sapiens mRNA; cDNA DKFZp686O088 (from clone DKFZp686O088) Length = 6858 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 281 ggtgctgcctatgatgaagatg 302 |||||||||||||||||||||| Sbjct: 385 ggtgctgcctatgatgaagatg 406
>gb|AY118977.1| Drosophila melanogaster LP01642 full insert cDNA Length = 651 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 549 gtttgaccttggcaacggccgc 570 |||||||||||||||||||||| Sbjct: 180 gtttgaccttggcaacggccgc 159
>ref|NM_132511.1| Drosophila melanogaster CG2444-RA (CG2444), mRNA Length = 625 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 549 gtttgaccttggcaacggccgc 570 |||||||||||||||||||||| Sbjct: 180 gtttgaccttggcaacggccgc 159
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 407 ccatccacaagcagggtgtactggtaaacaagatccatgcaaatgtatgg 456 ||||| ||||||| ||||||||||| | ||||||||||| |||||||| Sbjct: 16378 ccatctacaagcaatgtgtactggtagatgagatccatgcatatgtatgg 16427
>gb|AF378542.2|AF378542 Homo sapiens bradykinin receptor B2 (BDKRB2) gene, complete cds Length = 15152 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 281 ggtgctgcctatgatgaagatg 302 |||||||||||||||||||||| Sbjct: 2339 ggtgctgcctatgatgaagatg 2360
>gb|AE003486.2| Drosophila melanogaster chromosome X, section 38 of 74 of the complete sequence Length = 328128 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 549 gtttgaccttggcaacggccgc 570 |||||||||||||||||||||| Sbjct: 327849 gtttgaccttggcaacggccgc 327870
>emb|AL355102.5|CNS05TCL Human chromosome 14 DNA sequence BAC R-404P21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 201844 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 281 ggtgctgcctatgatgaagatg 302 |||||||||||||||||||||| Sbjct: 65647 ggtgctgcctatgatgaagatg 65626
>gb|L27594.1|HUMBB2R Homo sapiens bradykinin B2 receptor gene sequence Length = 7328 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 281 ggtgctgcctatgatgaagatg 302 |||||||||||||||||||||| Sbjct: 2716 ggtgctgcctatgatgaagatg 2737
>emb|AL669971.2| Human DNA sequence from clone RP11-419D21 on chromosome 13 Contains part of the ATP8A2 gene for ATPase, aminophospholipid transporter-like, Class I, type 8A, member 2 (ML-1 protein)(IB, ATP, ML-1, ATPIB, DKFZP434B1913), complete sequence Length = 80077 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 gtaatccttgtgtccttgcgt 114 ||||||||||||||||||||| Sbjct: 76793 gtaatccttgtgtccttgcgt 76813
>gb|AF156781.1|AF156781 Dolichos biflorus apyrase mRNA, complete cds Length = 1435 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 371 accaatgtcatctcctgttggggatcaacaccaaatccatc 411 |||||||| ||||| || |||||||||| ||||||||||| Sbjct: 1293 accaatgtaatctcttgctggggatcaatgccaaatccatc 1253
>gb|AY258858.1| Xiphophorus maculatus microsatellite Msb044 sequence Length = 519 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 tcatcatcatcagtacaaaaataataat 53 |||||||||||| ||||| ||||||||| Sbjct: 53 tcatcatcatcattacaataataataat 26
>ref|XM_424140.1| PREDICTED: Gallus gallus similar to karyopherin beta 1; nuclear factor p97; importin 90; importin beta-1 subunit (LOC426499), partial mRNA Length = 1959 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 cttctggacagcagggtagc 485 |||||||||||||||||||| Sbjct: 1463 cttctggacagcagggtagc 1444
>gb|AC134848.2| Mus musculus BAC clone RP24-196B3 from chromosome 8, complete sequence Length = 149146 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 431 taaacaagatccatgcaaatgtat 454 |||||||||||||||||| ||||| Sbjct: 38203 taaacaagatccatgcaagtgtat 38180
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 tcatcatcatcagtacaaaaataataat 53 |||||||||||| ||||| ||||||||| Sbjct: 585907 tcatcatcatcattacaataataataat 585880
>ref|XM_755645.1| Ustilago maydis 521 hypothetical protein (UM04591.1) partial mRNA Length = 4335 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gatgaagatgcaacctcgat 312 |||||||||||||||||||| Sbjct: 3894 gatgaagatgcaacctcgat 3875
>emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chromosome 9, complete sequence Length = 196093 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tcatcatcatcagtacaaaaataa 49 |||||||||||||||||| ||||| Sbjct: 122838 tcatcatcatcagtacaataataa 122861
>gb|AC153015.4| Mus musculus BAC clone RP23-200I3 from chromosome 8, complete sequence Length = 232038 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 431 taaacaagatccatgcaaatgtat 454 |||||||||||||||||| ||||| Sbjct: 45691 taaacaagatccatgcaagtgtat 45714
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgagcggccatgctgcttca 340 |||||||||||||||||||| Sbjct: 1457557 cgagcggccatgctgcttca 1457538
>emb|AL353753.6| Human DNA sequence from clone RP11-477G9 on chromosome 9, complete sequence Length = 178965 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 gctacccctaaattcaaaac 222 |||||||||||||||||||| Sbjct: 41136 gctacccctaaattcaaaac 41155
>emb|AL132655.13|HSJ806M20 Human DNA sequence from clone RP4-806M20 on chromosome 20 Contains a novel pseudogene, the 5' end of the GNAS complex locus and a CpG island, complete sequence Length = 126586 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ggggaggggaggctggatga 151 |||||||||||||||||||| Sbjct: 118045 ggggaggggaggctggatga 118026
>emb|X77921.1|EAAMASL E.amylovara (Ea7/74) ams- A, B, C, D, E, F, G, H, I, J, K and L genes Length = 17013 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tggcagcttcctcaaagtca 544 |||||||||||||||||||| Sbjct: 6876 tggcagcttcctcaaagtca 6895
>gb|AC026224.6| Homo sapiens chromosome 10 clone RP11-74N14, complete sequence Length = 167768 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 aaacaagatccatgcaaatg 451 |||||||||||||||||||| Sbjct: 18981 aaacaagatccatgcaaatg 19000
>gb|AF305783.1|AF305783 Pisum sativum apyrase 2 (apy2) mRNA, complete cds Length = 1790 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 413 acaagcagggtgtactggtaaacaagatccat 444 |||||||| || |||||||| ||||||||||| Sbjct: 1394 acaagcagtgtatactggtatacaagatccat 1363
>gb|AC150470.3| Macropus eugenii clone ME_KBa-588N19, complete sequence Length = 83610 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 tcatcatcatcagtacaaaaataataat 53 |||||||||||| ||||| ||||||||| Sbjct: 22523 tcatcatcatcattacaataataataat 22496
>emb|AL671906.15| Mouse DNA sequence from clone RP23-300B11 on chromosome X, complete sequence Length = 216692 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ctcatcatcatcagtacaaa 44 |||||||||||||||||||| Sbjct: 29425 ctcatcatcatcagtacaaa 29406
>emb|AJ251760.1|HSA251760 Homo sapiens NESP55, GNAS1 antisense (partial) and XLalphas (partial) genes Length = 20924 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ggggaggggaggctggatga 151 |||||||||||||||||||| Sbjct: 12169 ggggaggggaggctggatga 12150
>dbj|AP006552.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT28G12, TM0107, complete sequence Length = 97172 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 400 accaaatccatccacaagcagggtgtactggtaaacaagatcca 443 |||||||||||| ||||||| |||||| ||| |||||||||| Sbjct: 455 accaaatccatcaacaagcaatgtgtacacgtagacaagatcca 412
>dbj|AP006551.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT35D17, TM0104, complete sequence Length = 96208 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 400 accaaatccatccacaagcagggtgtactggtaaacaagatcca 443 |||||||||||| ||||||| |||||| ||| |||||||||| Sbjct: 20559 accaaatccatcaacaagcaatgtgtacacgtagacaagatcca 20516
>emb|AL645545.8| Mouse DNA sequence from clone RP23-203J4 on chromosome X, complete sequence Length = 181243 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gacaaaatggcaacttcagg 182 |||||||||||||||||||| Sbjct: 99449 gacaaaatggcaacttcagg 99468 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,231,081 Number of Sequences: 3902068 Number of extensions: 5231081 Number of successful extensions: 92457 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92249 Number of HSP's gapped (non-prelim): 201 length of query: 588 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 565 effective length of database: 17,143,297,704 effective search space: 9685963202760 effective search space used: 9685963202760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)