ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags13o22 |
|---|---|
| Clone Library Name | barley_pub |
>CFDP1_CHICK (Q75QI0) Craniofacial development protein 1 (Bucentaur)| Length = 290 Score = 85.5 bits (210), Expect = 1e-16 Identities = 50/132 (37%), Positives = 79/132 (59%), Gaps = 17/132 (12%) Frame = -2 Query: 524 GKVEITEVRDFAGKDIEIKKLVDADSKEAVE--------KASAVGAAP--------SAVD 393 G+V IT+V DFAG+++ + K VD+ SKEA ++SA G+ P S + Sbjct: 157 GRVTITKVFDFAGEEVRVTKEVDSSSKEAKSFLKQQEKWQSSAPGSLPTVSGVKRPSGIS 216 Query: 392 NILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRADYRE 216 ++L +I KKQK+S L+K+K DW EL + + + Y++R++FL+R D+R+ Sbjct: 217 SLLGKIGSKKQKMSTLEKSKLDWENFKEEEGIVEELAIHNRGKDGYIERKAFLERVDHRQ 276 Query: 215 YELERDARLSLM 180 +E+ERD RLS M Sbjct: 277 FEIERDIRLSRM 288
>CFDP1_HUMAN (Q9UEE9) Craniofacial development protein 1 (Bucentaur)| Length = 299 Score = 81.6 bits (200), Expect = 2e-15 Identities = 59/179 (32%), Positives = 84/179 (46%), Gaps = 23/179 (12%) Frame = -2 Query: 647 NDQVPKNE-QQQTQQKTSEXXXXXXXXXXXXXXXXXXXASGRGKVEITEVRDFAGKDIEI 471 ND PK++ TQ K E KV+IT+V DFAG+++ + Sbjct: 119 NDVGPKSKVPPSTQVKKGEETEETSSSKLLVKAEELEKPKETEKVKITKVFDFAGEEVRV 178 Query: 470 KKLVDADSKEAV------EKASAVGAAPSAV---------------DNILEQI-RKKQKL 357 K VDA SKEA EK PSA+ ++L +I KKQK+ Sbjct: 179 TKEVDATSKEAKSFFKQNEKEKPQANVPSALPSLPAGSGLKRSSGMSSLLGKIGAKKQKM 238 Query: 356 SVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRADYREYELERDARLSLM 180 S L+K+K DW EL + + Y++R++FL R D+R++E+ERD RLS M Sbjct: 239 STLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRVDHRQFEIERDLRLSKM 297
>CFDP1_CAMDR (Q4ADK7) Craniofacial development protein 1 (Bucentaur)| Length = 297 Score = 81.3 bits (199), Expect = 3e-15 Identities = 58/179 (32%), Positives = 84/179 (46%), Gaps = 23/179 (12%) Frame = -2 Query: 647 NDQVPKNE-QQQTQQKTSEXXXXXXXXXXXXXXXXXXXASGRGKVEITEVRDFAGKDIEI 471 ND PK++ TQ K E KV+IT+V DFAG+++ + Sbjct: 117 NDVGPKSKVPPSTQVKREEETEETGSSKLLVKAEELEKPKETEKVKITKVFDFAGEEVRV 176 Query: 470 KKLVDADSKEAVE----------KASAVGAAPS-----------AVDNILEQI-RKKQKL 357 K VDA SKEA + + A PS + N+L +I KKQK+ Sbjct: 177 TKEVDATSKEAKSFFKQNEKEKPQTNVPAALPSLPAGSGLKRSSGMSNLLGKIGAKKQKM 236 Query: 356 SVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRADYREYELERDARLSLM 180 S L+K+K DW EL + + Y++R++FL R D+R++E+ERD RLS M Sbjct: 237 STLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRVDHRQFEIERDLRLSKM 295
>CFDP1_MOUSE (O88271) Craniofacial development protein 1 (Bucentaur) (27 kDa| craniofacial protein) (Protein Cp27) Length = 295 Score = 81.3 bits (199), Expect = 3e-15 Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 22/136 (16%) Frame = -2 Query: 521 KVEITEVRDFAGKDIEIKKLVDADSKEAV--------EKASAVGAAP------------- 405 KV+IT+V DFAG+++ + K VDA SKEA EK A+ +P Sbjct: 158 KVKITKVFDFAGEEVRVTKEVDAASKEAKSFLKQTEREKPQALVTSPATPLPAGSGIKRA 217 Query: 404 SAVDNILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRA 228 S + ++L +I KKQK+S L+K+K DW EL + + Y++R++FL R Sbjct: 218 SGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRV 277 Query: 227 DYREYELERDARLSLM 180 D+R++E+ERD RLS M Sbjct: 278 DHRQFEIERDLRLSKM 293
>CFDP1_RAT (Q75UQ2) Craniofacial development protein 1 (Bucentaur)| Length = 295 Score = 80.5 bits (197), Expect = 4e-15 Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 22/136 (16%) Frame = -2 Query: 521 KVEITEVRDFAGKDIEIKKLVDADSKEAV--------EKASAV---GAAP---------- 405 KV+IT+V DFAG+++ + K VDA SKEA EK A+ A P Sbjct: 158 KVKITKVFDFAGEEVRVTKEVDATSKEAKSFLKQTEKEKPQALVTSAATPPPAGSGIKRT 217 Query: 404 SAVDNILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRA 228 S + ++L +I KKQK+S L+K+K DW EL + + Y++R++FL+R Sbjct: 218 SGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLERV 277 Query: 227 DYREYELERDARLSLM 180 D+R++E+ERD RLS M Sbjct: 278 DHRQFEIERDLRLSKM 293
>CFDP1_TRAJA (Q60FC2) Craniofacial development protein 1 (Bucentaur) (h-type| BCNT protein) Length = 298 Score = 79.0 bits (193), Expect = 1e-14 Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 22/136 (16%) Frame = -2 Query: 521 KVEITEVRDFAGKDIEIKKLVDADSKEAV--------EKA-----SAVGAAP-------- 405 KV+IT+V DFAG+++ + K VD SKEA EK SAV + P Sbjct: 161 KVKITKVFDFAGEEVRVTKEVDPTSKEAKSFFKQSEKEKPQPNVPSAVSSLPAGSGLKRS 220 Query: 404 SAVDNILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRA 228 S + ++L +I KKQK+S L+K+K DW EL + + Y++R++FL R Sbjct: 221 SGMSSLLGKIGAKKQKMSTLEKSKLDWENFKEEEGIAEELAIHNRGKEGYIERKAFLDRV 280 Query: 227 DYREYELERDARLSLM 180 D+R++E+ERD RLS M Sbjct: 281 DHRQFEIERDLRLSKM 296
>CFDP1_BOVIN (Q8HXY9) Craniofacial development protein 1 (Bucentaur) (h-type| BCNT protein) Length = 297 Score = 78.6 bits (192), Expect = 2e-14 Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 22/136 (16%) Frame = -2 Query: 521 KVEITEVRDFAGKDIEIKKLVDADSKEAV------EKASAVGAAPSAV------------ 396 KV+IT+V DFAG+++ + K VDA SKEA EK P AV Sbjct: 160 KVKITKVFDFAGEEVRVIKEVDATSKEAKSFFKQNEKEKPQSNVPPAVPSLPAGSGLKRS 219 Query: 395 ---DNILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRA 228 ++L +I KKQK+S L+K+K DW EL + + Y++R++FL R Sbjct: 220 SGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRV 279 Query: 227 DYREYELERDARLSLM 180 D+R++E+ERD RLS M Sbjct: 280 DHRQFEIERDLRLSKM 295
>CFDP1_MUNRE (Q4ADK4) Craniofacial development protein 1 (Bucentaur)| Length = 298 Score = 76.6 bits (187), Expect = 6e-14 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 22/136 (16%) Frame = -2 Query: 521 KVEITEVRDFAGKDIEIKKLVDADSKEAVE----------KASAVGAAPS---------- 402 KV+IT+V DFAG+++ + K VDA SKEA +++ + PS Sbjct: 161 KVKITKVFDFAGEEVRVIKEVDATSKEAKSFFKQNEKEKPQSNISSSVPSLSAGSGLKRS 220 Query: 401 -AVDNILEQI-RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRA 228 + ++L +I KKQK+S L+K+K DW EL + + Y++R++FL R Sbjct: 221 SGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRV 280 Query: 227 DYREYELERDARLSLM 180 D+R++E+ERD RLS M Sbjct: 281 DHRQFEIERDLRLSQM 296
>SWC5_DEBHA (Q6BWZ7) SWR1-complex protein 5| Length = 341 Score = 44.7 bits (104), Expect = 3e-04 Identities = 45/147 (30%), Positives = 57/147 (38%), Gaps = 37/147 (25%) Frame = -2 Query: 521 KVEITEVRDFAGKDIEIKKLVDADSKEAVE-------------KASAVGAA--------- 408 KV+I FAGK I KLVDA S EA KASA + Sbjct: 181 KVKIESSYTFAGKVITESKLVDAGSAEAKAYFNSTKGITASNLKASAATRSFVPIIRTIP 240 Query: 407 --------------PSAVDNILEQIR-KKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKK 273 PS +D L KKQKLS L+K++ DW +L + K Sbjct: 241 GSTEPTELRIKLKRPSLIDKFLSTYGDKKQKLSTLEKSRLDWASFVDQKKLKDDLSTHNK 300 Query: 272 SSNQYLDRQSFLKRADYREYELERDAR 192 YLD+Q FL R + E + A+ Sbjct: 301 GG--YLDKQEFLGRLQDKRDEHYQKAK 325
>SWC5_ASHGO (Q754T8) SWR1-complex protein 5| Length = 286 Score = 39.7 bits (91), Expect = 0.008 Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 23/136 (16%) Frame = -2 Query: 494 FAGKDIEIKKLVDADSKEAVEKASAVGAAPSAV--------------------DNILEQI 375 FAG+ + KK+V S EA E +++ P + ILEQI Sbjct: 153 FAGEMVREKKMVLKSSAEAQEYLNSLKFKPKELVPSTMQEMDGGSKLRRPLKRPPILEQI 212 Query: 374 ---RKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRADYREYELE 204 K KL+ L+K+K DW EL + K YL +Q FL++ D + E Sbjct: 213 IAGALKPKLTTLEKSKLDWATYVDKEGINEELQLFNKDG--YLAKQDFLRKVDGIQNEQY 270 Query: 203 RDARLSLMAKRKSESM 156 ++ R + K ++ M Sbjct: 271 KELRRQELQKNGAQGM 286
>SWC5_CANGA (Q6FML0) SWR1-complex protein 5| Length = 299 Score = 38.1 bits (87), Expect = 0.025 Identities = 45/164 (27%), Positives = 59/164 (35%), Gaps = 44/164 (26%) Frame = -2 Query: 533 SGRGKVEITEVRDFAGKDIEIKKLVDADSKEAVE---------KASAVGAAPSAVDNI-- 387 +G V I V FAG+ I KK V S EAVE G+ ++ I Sbjct: 133 AGEEMVTIERVYKFAGETIREKKTVPISSAEAVEYLNNLKFRKSTDQAGSTKRKLEEIDV 192 Query: 386 -----------------------------LEQIRK---KQKLSVLDKTKKDWXXXXXXXX 303 LEQI K KLS L+K+K DW Sbjct: 193 KENNNTNEDTSESGIDRKKLRRPLKRPPFLEQIISGALKPKLSTLEKSKLDWATYVDKEG 252 Query: 302 XXXELGAYKKSSNQYLDRQSFLKRAD-YREYELERDARLSLMAK 174 EL A+ K YL +Q FL + D +E E + R +M + Sbjct: 253 INDELSAHNKDG--YLAKQDFLNKVDSVKENEYKELRRKEMMIR 294
>SWC5_GIBZE (Q4I650) SWR1-complex protein 5| Length = 327 Score = 37.0 bits (84), Expect = 0.055 Identities = 20/60 (33%), Positives = 32/60 (53%) Frame = -2 Query: 365 QKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLKRADYREYELERDARLS 186 +KL+V+DK++ DW EL KS + Y+ R+ FL +++ E R ARL+ Sbjct: 265 KKLNVVDKSRMDWAGYVDKEGIKDELALAGKSKDSYMAREDFLAKSEAMRDEDSRRARLA 324
>SWC5_CANAL (Q5A8H7) SWR1-complex protein 5| Length = 338 Score = 37.0 bits (84), Expect = 0.055 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Frame = -2 Query: 407 PSAVDNILE--QIRKKQKLSVLDKTKKDWXXXXXXXXXXXELGAYKKSSNQYLDRQSFLK 234 PS +D L KK KLS L+K++ DW EL + K+ YLD+Q F+ Sbjct: 254 PSLIDRFLSINGNSKKMKLSTLEKSRLDWASFVDKRNINEELKIHNKAG--YLDKQDFIN 311 Query: 233 RADYREYELERDAR 192 R + + +L A+ Sbjct: 312 RMNSKRDDLYLQAK 325
>SPO15_SCHPO (Q10411) Sporulation-specific protein 15| Length = 1957 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 8/62 (12%) Frame = -2 Query: 515 EITEVRDFAGKDI--------EIKKLVDADSKEAVEKASAVGAAPSAVDNILEQIRKKQK 360 EI RDF K I +++ +++ S E EK++ + ++N+ EQI++++K Sbjct: 445 EINSERDFQNKKIKDFEKIEQDLRACLNSSSNELKEKSALIDKKDQELNNLREQIKEQKK 504 Query: 359 LS 354 +S Sbjct: 505 VS 506
>VATE_CANAL (O94072) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 226 Score = 30.8 bits (68), Expect = 3.9 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Frame = -2 Query: 521 KVEITEVRDFAGKDIEIKKL---VDADSKEAVEKASAVGAAPSAVDNILEQIRKKQKLS 354 K E+++++ F K+ + K + AD + +EKAS V + +A+D+ EQ KK L+ Sbjct: 9 KSELSKMQAFIEKEAKEKAKEIKLKADEEYEIEKASIVRSETAAIDSTYEQKLKKASLA 67
>ICK_HUMAN (Q9UPZ9) Serine/threonine-protein kinase ICK (EC 2.7.11.22)| (Intestinal cell kinase) (hICK) (MAK-related kinase) (MRK) (Laryngeal cancer kinase 2) (LCK2) Length = 632 Score = 30.8 bits (68), Expect = 3.9 Identities = 22/73 (30%), Positives = 32/73 (43%) Frame = +2 Query: 428 PSQPLPLNPHLRVS*FQYPCQQSPVPRLSPLSLFQMQQWRHL*QLQEHLPQVFWYPRLFS 607 P+QP P PH R+S Q+ Q P+ P ++ + H LQE P +P L + Sbjct: 322 PAQP-PAKPHTRISSRQHQASQPPLHLTYPYKA-EVSRTDHPSHLQEDKPSPLLFPSLHN 379 Query: 608 VVSVVAHFLGLDH 646 GL+H Sbjct: 380 KHPQSKITAGLEH 392 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,674,264 Number of Sequences: 219361 Number of extensions: 1243833 Number of successful extensions: 3744 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3637 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3729 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
