ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13o21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_184007.1| Oryza sativa (japonica cultivar-group), predic... 357 3e-95
2dbj|AK100444.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 3e-95
3dbj|AK099063.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 3e-95
4dbj|AK062168.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 3e-95
5gb|AY109470.1| Zea mays CL2102_5 mRNA sequence 238 2e-59
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
7dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
8dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
9ref|NM_185270.1| Oryza sativa (japonica cultivar-group), predic... 90 1e-14
10dbj|AK102420.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
11gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome... 78 4e-11
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
13gb|BT014107.1| Lycopersicon esculentum clone 133211F, mRNA sequence 46 0.15
14gb|AC154621.2| Mus musculus BAC clone RP23-323P15 from chromosom... 44 0.58
15ref|NM_111566.2| Arabidopsis thaliana MFP2 (MULTIFUNCTIONAL PROT... 42 2.3
16gb|AC018491.9| Drosophila melanogaster clone BACR11H15, complete... 42 2.3
17gb|BC014149.2| Homo sapiens cDNA clone IMAGE:3613441, partial cds 42 2.3
18emb|AL596450.8| Mouse DNA sequence from clone RP23-373H2 on chro... 42 2.3
19emb|AL670939.6| Mouse DNA sequence from clone RP23-59O12 on chro... 42 2.3
20gb|AY062650.1| Arabidopsis thaliana fatty acid multifunctional p... 42 2.3
21gb|AY062621.1| Arabidopsis thaliana fatty acid multifunctional p... 42 2.3
22gb|AF123254.1|AF123254 Arabidopsis thaliana MFP2 mRNA, complete cds 42 2.3
23gb|AC017104.8| Homo sapiens BAC clone RP11-562I5 from 2, complet... 42 2.3
24gb|AE002611.5| Drosophila melanogaster chromosome X, section 66 ... 42 2.3
25gb|AC153563.3| Mus musculus 10 BAC RP23-455D21 (Roswell Park Can... 42 2.3
26gb|AC127368.3| Mus musculus BAC clone RP23-22J14 from chromosome... 40 9.1
27gb|AC122488.3| Mus musculus BAC clone RP24-383B2 from chromosome... 40 9.1
28gb|AC003085.2| Homo sapiens BAC clone CTB-94H21 from 7, complete... 40 9.1
29gb|AC142286.1| Pan troglodytes BAC clone RP43-169G24 from 7, com... 40 9.1
30gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosom... 40 9.1
31emb|AL928688.3| Human DNA sequence from clone RP11-77N10 on chro... 40 9.1
32emb|AL158157.8| Human DNA sequence from clone RP11-413D24 on chr... 40 9.1
33gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 9.1
34emb|AJ000886.1|BNJ000886 Brassica napus multifunctional protein ... 40 9.1
35gb|AF275633.1|AF275633 Phanerochaete chrysosporium lipG/lipH int... 40 9.1
36gb|AE014847.1| Plasmodium falciparum 3D7 chromosome 12, section ... 40 9.1
37emb|AL772166.15| Mouse DNA sequence from clone RP23-413I12 on ch... 40 9.1
38emb|AL110505.5|CNS01DRA Human chromosome 14 DNA sequence BAC R-8... 40 9.1

>ref|NM_184007.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2184

 Score =  357 bits (180), Expect = 3e-95
 Identities = 330/380 (86%)
 Strand = Plus / Minus

                                                                        
Query: 287  ggtgcactcagaggaatccctttcgccgctctttcggcgaggtaggagcaaggctcgaag 346
            |||||||||||||||| ||| || || |||||||| || |||||||| ||||||| ||||
Sbjct: 2156 ggtgcactcagaggaaccccatttgctgctctttctgcaaggtaggaacaaggcttgaag 2097

                                                                        
Query: 347  aagctgccgtaccgcttcgcccactgctgcaacttttcgtggatgtattttgcgccgatg 406
            | |  ||  |||||||||||||||  || |||||| || |||||||| ||||| || |||
Sbjct: 2096 atgtcgctataccgcttcgcccacacctccaacttgtcatggatgtactttgcaccaatg 2037

                                                                        
Query: 407  gaatctccccacaacatgacccctcccctgtaaggtgggaatcccatgccaaagattgag 466
            |||||| |||| |||||||  |||||||| || |||||||||||||||||||||||||||
Sbjct: 2036 gaatctgcccagaacatgattcctcccctatacggtgggaatcccatgccaaagattgag 1977

                                                                        
Query: 467  gcgatgtcaagatctgacgcctttactgcaatgccctcatcaaggacacggcacgcttcg 526
            || |||||||| || || ||||| |||||||| ||||||||||| |||||||| || || 
Sbjct: 1976 gcaatgtcaaggtcagaagccttgactgcaattccctcatcaagaacacggcaagcctca 1917

                                                                        
Query: 527  tttatgaccgggaagaacaccatctcaactatgtccttgtcacttagcttcatcaactca 586
            |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1916 tttatgactgggaagaagaccatctcaactatgtccttctcacttagcttcatcaactca 1857

                                                                        
Query: 587  gcgtctggagtgactcctgccatgctcctagatttctgaatatacgtcataatttcagga 646
            | |||||| || ||||| ||||| ||||||||||| | ||||||  |||||||||| |||
Sbjct: 1856 gtgtctggtgttactccagccatactcctagatttttcaatatatttcataatttcggga 1797

                                
Query: 647  tcaggagttgccttcctctt 666
            ||||||||||||||||||||
Sbjct: 1796 tcaggagttgccttcctctt 1777



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>dbj|AK100444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090D07, full
            insert sequence
          Length = 2677

 Score =  357 bits (180), Expect = 3e-95
 Identities = 330/380 (86%)
 Strand = Plus / Minus

                                                                        
Query: 287  ggtgcactcagaggaatccctttcgccgctctttcggcgaggtaggagcaaggctcgaag 346
            |||||||||||||||| ||| || || |||||||| || |||||||| ||||||| ||||
Sbjct: 2372 ggtgcactcagaggaaccccatttgctgctctttctgcaaggtaggaacaaggcttgaag 2313

                                                                        
Query: 347  aagctgccgtaccgcttcgcccactgctgcaacttttcgtggatgtattttgcgccgatg 406
            | |  ||  |||||||||||||||  || |||||| || |||||||| ||||| || |||
Sbjct: 2312 atgtcgctataccgcttcgcccacacctccaacttgtcatggatgtactttgcaccaatg 2253

                                                                        
Query: 407  gaatctccccacaacatgacccctcccctgtaaggtgggaatcccatgccaaagattgag 466
            |||||| |||| |||||||  |||||||| || |||||||||||||||||||||||||||
Sbjct: 2252 gaatctgcccagaacatgattcctcccctatacggtgggaatcccatgccaaagattgag 2193

                                                                        
Query: 467  gcgatgtcaagatctgacgcctttactgcaatgccctcatcaaggacacggcacgcttcg 526
            || |||||||| || || ||||| |||||||| ||||||||||| |||||||| || || 
Sbjct: 2192 gcaatgtcaaggtcagaagccttgactgcaattccctcatcaagaacacggcaagcctca 2133

                                                                        
Query: 527  tttatgaccgggaagaacaccatctcaactatgtccttgtcacttagcttcatcaactca 586
            |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2132 tttatgactgggaagaagaccatctcaactatgtccttctcacttagcttcatcaactca 2073

                                                                        
Query: 587  gcgtctggagtgactcctgccatgctcctagatttctgaatatacgtcataatttcagga 646
            | |||||| || ||||| ||||| ||||||||||| | ||||||  |||||||||| |||
Sbjct: 2072 gtgtctggtgttactccagccatactcctagatttttcaatatatttcataatttcggga 2013

                                
Query: 647  tcaggagttgccttcctctt 666
            ||||||||||||||||||||
Sbjct: 2012 tcaggagttgccttcctctt 1993



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>dbj|AK099063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157A11, full
           insert sequence
          Length = 941

 Score =  357 bits (180), Expect = 3e-95
 Identities = 330/380 (86%)
 Strand = Plus / Minus

                                                                       
Query: 287 ggtgcactcagaggaatccctttcgccgctctttcggcgaggtaggagcaaggctcgaag 346
           |||||||||||||||| ||| || || |||||||| || |||||||| ||||||| ||||
Sbjct: 598 ggtgcactcagaggaaccccatttgctgctctttctgcaaggtaggaacaaggcttgaag 539

                                                                       
Query: 347 aagctgccgtaccgcttcgcccactgctgcaacttttcgtggatgtattttgcgccgatg 406
           | |  ||  |||||||||||||||  || |||||| || |||||||| ||||| || |||
Sbjct: 538 atgtcgctataccgcttcgcccacacctccaacttgtcatggatgtactttgcaccaatg 479

                                                                       
Query: 407 gaatctccccacaacatgacccctcccctgtaaggtgggaatcccatgccaaagattgag 466
           |||||| |||| |||||||  |||||||| || |||||||||||||||||||||||||||
Sbjct: 478 gaatctgcccagaacatgattcctcccctatacggtgggaatcccatgccaaagattgag 419

                                                                       
Query: 467 gcgatgtcaagatctgacgcctttactgcaatgccctcatcaaggacacggcacgcttcg 526
           || |||||||| || || ||||| |||||||| ||||||||||| |||||||| || || 
Sbjct: 418 gcaatgtcaaggtcagaagccttgactgcaattccctcatcaagaacacggcaagcctca 359

                                                                       
Query: 527 tttatgaccgggaagaacaccatctcaactatgtccttgtcacttagcttcatcaactca 586
           |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 358 tttatgactgggaagaagaccatctcaactatgtccttctcacttagcttcatcaactca 299

                                                                       
Query: 587 gcgtctggagtgactcctgccatgctcctagatttctgaatatacgtcataatttcagga 646
           | |||||| || ||||| ||||| ||||||||||| | ||||||  |||||||||| |||
Sbjct: 298 gtgtctggtgttactccagccatactcctagatttttcaatatatttcataatttcggga 239

                               
Query: 647 tcaggagttgccttcctctt 666
           ||||||||||||||||||||
Sbjct: 238 tcaggagttgccttcctctt 219



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>dbj|AK062168.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-B11, full
           insert sequence
          Length = 1148

 Score =  357 bits (180), Expect = 3e-95
 Identities = 330/380 (86%)
 Strand = Plus / Minus

                                                                       
Query: 287 ggtgcactcagaggaatccctttcgccgctctttcggcgaggtaggagcaaggctcgaag 346
           |||||||||||||||| ||| || || |||||||| || |||||||| ||||||| ||||
Sbjct: 840 ggtgcactcagaggaaccccatttgctgctctttctgcaaggtaggaacaaggcttgaag 781

                                                                       
Query: 347 aagctgccgtaccgcttcgcccactgctgcaacttttcgtggatgtattttgcgccgatg 406
           | |  ||  |||||||||||||||  || |||||| || |||||||| ||||| || |||
Sbjct: 780 atgtcgctataccgcttcgcccacacctccaacttgtcatggatgtactttgcaccaatg 721

                                                                       
Query: 407 gaatctccccacaacatgacccctcccctgtaaggtgggaatcccatgccaaagattgag 466
           |||||| |||| |||||||  |||||||| || |||||||||||||||||||||||||||
Sbjct: 720 gaatctgcccagaacatgattcctcccctatacggtgggaatcccatgccaaagattgag 661

                                                                       
Query: 467 gcgatgtcaagatctgacgcctttactgcaatgccctcatcaaggacacggcacgcttcg 526
           || |||||||| || || ||||| |||||||| ||||||||||| |||||||| || || 
Sbjct: 660 gcaatgtcaaggtcagaagccttgactgcaattccctcatcaagaacacggcaagcctca 601

                                                                       
Query: 527 tttatgaccgggaagaacaccatctcaactatgtccttgtcacttagcttcatcaactca 586
           |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 600 tttatgactgggaagaagaccatctcaactatgtccttctcacttagcttcatcaactca 541

                                                                       
Query: 587 gcgtctggagtgactcctgccatgctcctagatttctgaatatacgtcataatttcagga 646
           | |||||| || ||||| ||||| ||||||||||| | ||||||  |||||||||| |||
Sbjct: 540 gtgtctggtgttactccagccatactcctagatttttcaatatatttcataatttcggga 481

                               
Query: 647 tcaggagttgccttcctctt 666
           ||||||||||||||||||||
Sbjct: 480 tcaggagttgccttcctctt 461



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>gb|AY109470.1| Zea mays CL2102_5 mRNA sequence
          Length = 1160

 Score =  238 bits (120), Expect = 2e-59
 Identities = 275/330 (83%)
 Strand = Plus / Plus

                                                                       
Query: 287 ggtgcactcagaggaatccctttcgccgctctttcggcgaggtaggagcaaggctcgaag 346
           ||||||||||||||| ||||||| || |||||||| |||||||| ||||| |||| ||||
Sbjct: 158 ggtgcactcagaggattcccttttgcagctctttcagcgaggtaagagcagggcttgaag 217

                                                                       
Query: 347 aagctgccgtaccgcttcgcccactgctgcaacttttcgtggatgtattttgcgccgatg 406
           |||      |||||||| | ||||| || ||||||| | |||||||| ||||||||||||
Sbjct: 218 aagnnnnnataccgctttgtccactcctccaactttccatggatgtactttgcgccgatg 277

                                                                       
Query: 407 gaatctccccacaacatgacccctcccctgtaaggtgggaatcccatgccaaagattgag 466
           |||||| ||||   |||||| |||||||| ||||||||||| |||||||| ||||| || 
Sbjct: 278 gaatctgcccagtgcatgacacctcccctataaggtgggaaccccatgccgaagatcgaa 337

                                                                       
Query: 467 gcgatgtcaagatctgacgcctttactgcaatgccctcatcaaggacacggcacgcttcg 526
           |||||||| || || || ||||| || || || |||||||||||||| ||||| ||||| 
Sbjct: 338 gcgatgtctaggtcagaagccttgacggcgataccctcatcaaggactcggcaggcttca 397

                                                                       
Query: 527 tttatgaccgggaagaacaccatctcaactatgtccttgtcacttagcttcatcaactca 586
           ||||| ||||||     ||||||||| |||||||| || |||||||||||||||| ||||
Sbjct: 398 tttatcaccgggnnnnncaccatctcgactatgtctttctcacttagcttcatcagctca 457

                                         
Query: 587 gcgtctggagtgactcctgccatgctccta 616
           |  ||||| || ||||||||||||||||||
Sbjct: 458 ggatctggtgtaactcctgccatgctccta 487



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  184 bits (93), Expect = 2e-43
 Identities = 132/145 (91%)
 Strand = Plus / Minus

                                                                            
Query: 440      ggtgggaatcccatgccaaagattgaggcgatgtcaagatctgacgcctttactgcaatg 499
                ||||||||||||||||||||||||||||| |||||||| || || ||||| |||||||| 
Sbjct: 13875253 ggtgggaatcccatgccaaagattgaggcaatgtcaaggtcagaagccttgactgcaatt 13875194

                                                                            
Query: 500      ccctcatcaaggacacggcacgcttcgtttatgaccgggaagaacaccatctcaactatg 559
                ||||||||||| |||||||| || || |||||||| |||||||| |||||||||||||||
Sbjct: 13875193 ccctcatcaagaacacggcaagcctcatttatgactgggaagaagaccatctcaactatg 13875134

                                         
Query: 560      tccttgtcacttagcttcatcaact 584
                ||||| |||||||||||||||||||
Sbjct: 13875133 tccttctcacttagcttcatcaact 13875109



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                            
Query: 583      ctcagcgtctggagtgactcctgccatgctcctagatttctgaatatacgtcataatttc 642
                ||||| |||||| || ||||| ||||| ||||||||||| | ||||||  ||||||||||
Sbjct: 13874663 ctcagtgtctggtgttactccagccatactcctagatttttcaatatatttcataatttc 13874604

                                        
Query: 643      aggatcaggagttgccttcctctt 666
                 |||||||||||||||||||||||
Sbjct: 13874603 gggatcaggagttgccttcctctt 13874580



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 117/142 (82%)
 Strand = Plus / Minus

                                                                            
Query: 295      cagaggaatccctttcgccgctctttcggcgaggtaggagcaaggctcgaagaagctgcc 354
                |||||||| ||| || || |||||||| || |||||||| ||||||| ||||| |  || 
Sbjct: 13875484 cagaggaaccccatttgctgctctttctgcaaggtaggaacaaggcttgaagatgtcgct 13875425

                                                                            
Query: 355      gtaccgcttcgcccactgctgcaacttttcgtggatgtattttgcgccgatggaatctcc 414
                 |||||||||||||||  || |||||| || |||||||| ||||| || ||||||||| |
Sbjct: 13875424 ataccgcttcgcccacacctccaacttgtcatggatgtactttgcaccaatggaatctgc 13875365

                                      
Query: 415      ccacaacatgacccctcccctg 436
                ||| |||||||  |||||||||
Sbjct: 13875364 ccagaacatgattcctcccctg 13875343



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>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1051E10
          Length = 207782

 Score =  184 bits (93), Expect = 2e-43
 Identities = 132/145 (91%)
 Strand = Plus / Minus

                                                                         
Query: 440   ggtgggaatcccatgccaaagattgaggcgatgtcaagatctgacgcctttactgcaatg 499
             ||||||||||||||||||||||||||||| |||||||| || || ||||| |||||||| 
Sbjct: 35555 ggtgggaatcccatgccaaagattgaggcaatgtcaaggtcagaagccttgactgcaatt 35496

                                                                         
Query: 500   ccctcatcaaggacacggcacgcttcgtttatgaccgggaagaacaccatctcaactatg 559
             ||||||||||| |||||||| || || |||||||| |||||||| |||||||||||||||
Sbjct: 35495 ccctcatcaagaacacggcaagcctcatttatgactgggaagaagaccatctcaactatg 35436

                                      
Query: 560   tccttgtcacttagcttcatcaact 584
             ||||| |||||||||||||||||||
Sbjct: 35435 tccttctcacttagcttcatcaact 35411



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                         
Query: 583   ctcagcgtctggagtgactcctgccatgctcctagatttctgaatatacgtcataatttc 642
             ||||| |||||| || ||||| ||||| ||||||||||| | ||||||  ||||||||||
Sbjct: 34965 ctcagtgtctggtgttactccagccatactcctagatttttcaatatatttcataatttc 34906

                                     
Query: 643   aggatcaggagttgccttcctctt 666
              |||||||||||||||||||||||
Sbjct: 34905 gggatcaggagttgccttcctctt 34882



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 117/142 (82%)
 Strand = Plus / Minus

                                                                         
Query: 295   cagaggaatccctttcgccgctctttcggcgaggtaggagcaaggctcgaagaagctgcc 354
             |||||||| ||| || || |||||||| || |||||||| ||||||| ||||| |  || 
Sbjct: 35786 cagaggaaccccatttgctgctctttctgcaaggtaggaacaaggcttgaagatgtcgct 35727

                                                                         
Query: 355   gtaccgcttcgcccactgctgcaacttttcgtggatgtattttgcgccgatggaatctcc 414
              |||||||||||||||  || |||||| || |||||||| ||||| || ||||||||| |
Sbjct: 35726 ataccgcttcgcccacacctccaacttgtcatggatgtactttgcaccaatggaatctgc 35667

                                   
Query: 415   ccacaacatgacccctcccctg 436
             ||| |||||||  |||||||||
Sbjct: 35666 ccagaacatgattcctcccctg 35645



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>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0440D10
          Length = 144340

 Score =  184 bits (93), Expect = 2e-43
 Identities = 132/145 (91%)
 Strand = Plus / Minus

                                                                          
Query: 440    ggtgggaatcccatgccaaagattgaggcgatgtcaagatctgacgcctttactgcaatg 499
              ||||||||||||||||||||||||||||| |||||||| || || ||||| |||||||| 
Sbjct: 112656 ggtgggaatcccatgccaaagattgaggcaatgtcaaggtcagaagccttgactgcaatt 112597

                                                                          
Query: 500    ccctcatcaaggacacggcacgcttcgtttatgaccgggaagaacaccatctcaactatg 559
              ||||||||||| |||||||| || || |||||||| |||||||| |||||||||||||||
Sbjct: 112596 ccctcatcaagaacacggcaagcctcatttatgactgggaagaagaccatctcaactatg 112537

                                       
Query: 560    tccttgtcacttagcttcatcaact 584
              ||||| |||||||||||||||||||
Sbjct: 112536 tccttctcacttagcttcatcaact 112512



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                          
Query: 583    ctcagcgtctggagtgactcctgccatgctcctagatttctgaatatacgtcataatttc 642
              ||||| |||||| || ||||| ||||| ||||||||||| | ||||||  ||||||||||
Sbjct: 112066 ctcagtgtctggtgttactccagccatactcctagatttttcaatatatttcataatttc 112007

                                      
Query: 643    aggatcaggagttgccttcctctt 666
               |||||||||||||||||||||||
Sbjct: 112006 gggatcaggagttgccttcctctt 111983



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 117/142 (82%)
 Strand = Plus / Minus

                                                                          
Query: 295    cagaggaatccctttcgccgctctttcggcgaggtaggagcaaggctcgaagaagctgcc 354
              |||||||| ||| || || |||||||| || |||||||| ||||||| ||||| |  || 
Sbjct: 112887 cagaggaaccccatttgctgctctttctgcaaggtaggaacaaggcttgaagatgtcgct 112828

                                                                          
Query: 355    gtaccgcttcgcccactgctgcaacttttcgtggatgtattttgcgccgatggaatctcc 414
               |||||||||||||||  || |||||| || |||||||| ||||| || ||||||||| |
Sbjct: 112827 ataccgcttcgcccacacctccaacttgtcatggatgtactttgcaccaatggaatctgc 112768

                                    
Query: 415    ccacaacatgacccctcccctg 436
              ||| |||||||  |||||||||
Sbjct: 112767 ccagaacatgattcctcccctg 112746



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>ref|NM_185270.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2151

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 141/173 (81%)
 Strand = Plus / Minus

                                                                        
Query: 395  tttgcgccgatggaatctccccacaacatgacccctcccctgtaaggtgggaatcccatg 454
            |||||||||||||||||  ||||  ||| ||  || |||||||| ||||| |||||||||
Sbjct: 2012 tttgcgccgatggaatcggcccagtacacgatgccacccctgtatggtggaaatcccatg 1953

                                                                        
Query: 455  ccaaagattgaggcgatgtcaagatctgacgcctttactgcaatgccctcatcaaggaca 514
            || ||||||||||||||||| || || || || ||    ||||||||||||   ||||| 
Sbjct: 1952 ccgaagattgaggcgatgtcgaggtccgaggctttgttggcaatgccctcactgaggacc 1893

                                                                 
Query: 515  cggcacgcttcgtttatgaccgggaagaacaccatctcaactatgtccttgtc 567
             |||| || ||||| || || ||||||||||||||||| ||||| ||||||||
Sbjct: 1892 tggcaggcctcgttgataacagggaagaacaccatctccactatttccttgtc 1840



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>dbj|AK102420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093D14, full
            insert sequence
          Length = 2757

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 141/173 (81%)
 Strand = Plus / Minus

                                                                        
Query: 395  tttgcgccgatggaatctccccacaacatgacccctcccctgtaaggtgggaatcccatg 454
            |||||||||||||||||  ||||  ||| ||  || |||||||| ||||| |||||||||
Sbjct: 2271 tttgcgccgatggaatcggcccagtacacgatgccacccctgtatggtggaaatcccatg 2212

                                                                        
Query: 455  ccaaagattgaggcgatgtcaagatctgacgcctttactgcaatgccctcatcaaggaca 514
            || ||||||||||||||||| || || || || ||    ||||||||||||   ||||| 
Sbjct: 2211 ccgaagattgaggcgatgtcgaggtccgaggctttgttggcaatgccctcactgaggacc 2152

                                                                 
Query: 515  cggcacgcttcgtttatgaccgggaagaacaccatctcaactatgtccttgtc 567
             |||| || ||||| || || ||||||||||||||||| ||||| ||||||||
Sbjct: 2151 tggcaggcctcgttgataacagggaagaacaccatctccactatttccttgtc 2099



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>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05,
             complete sequence
          Length = 145044

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 111/135 (82%)
 Strand = Plus / Plus

                                                                         
Query: 433   cctgtaaggtgggaatcccatgccaaagattgaggcgatgtcaagatctgacgcctttac 492
             |||||| ||||| ||||||||||| ||||||||||||||||| || || || || ||   
Sbjct: 38173 cctgtatggtggaaatcccatgccgaagattgaggcgatgtcgaggtccgaggctttgtt 38232

                                                                         
Query: 493   tgcaatgccctcatcaaggacacggcacgcttcgtttatgaccgggaagaacaccatctc 552
              ||||||||||||   |||||  |||| || ||||| || || |||||||||||||||||
Sbjct: 38233 ggcaatgccctcactgaggacctggcaggcctcgttgataacagggaagaacaccatctc 38292

                            
Query: 553   aactatgtccttgtc 567
              ||||| ||||||||
Sbjct: 38293 cactatttccttgtc 38307



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 111/135 (82%)
 Strand = Plus / Plus

                                                                           
Query: 433     cctgtaaggtgggaatcccatgccaaagattgaggcgatgtcaagatctgacgcctttac 492
               |||||| ||||| ||||||||||| ||||||||||||||||| || || || || ||   
Sbjct: 3160456 cctgtatggtggaaatcccatgccgaagattgaggcgatgtcgaggtccgaggctttgtt 3160515

                                                                           
Query: 493     tgcaatgccctcatcaaggacacggcacgcttcgtttatgaccgggaagaacaccatctc 552
                ||||||||||||   |||||  |||| || ||||| || || |||||||||||||||||
Sbjct: 3160516 ggcaatgccctcactgaggacctggcaggcctcgttgataacagggaagaacaccatctc 3160575

                              
Query: 553     aactatgtccttgtc 567
                ||||| ||||||||
Sbjct: 3160576 cactatttccttgtc 3160590



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>gb|BT014107.1| Lycopersicon esculentum clone 133211F, mRNA sequence
          Length = 2510

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 422  atgacccctcccctgtaaggtgggaatcccatgcc 456
            |||| |||||| |||||||| ||||||||||||||
Sbjct: 2084 atgatccctcctctgtaaggagggaatcccatgcc 2050



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>gb|AC154621.2| Mus musculus BAC clone RP23-323P15 from chromosome 14, complete sequence
          Length = 211243

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 615    tagatttctgaatatacgtcat 636
              ||||||||||||||||||||||
Sbjct: 192845 tagatttctgaatatacgtcat 192824



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>ref|NM_111566.2| Arabidopsis thaliana MFP2 (MULTIFUNCTIONAL PROTEIN); enoyl-CoA
            hydratase AT3G06860 (MFP2) mRNA, complete cds
          Length = 2535

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 401  ccgatggaatctccccacaacatgacccctcccctgtaaggtgggaatcccat 453
            |||||||||||  |||| |||||||  ||||| ||||||||||| || |||||
Sbjct: 2093 ccgatggaatcagcccagaacatgattcctcctctgtaaggtggaaaacccat 2041



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>gb|AC018491.9| Drosophila melanogaster clone BACR11H15, complete sequence
          Length = 177953

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 71     atatattacataaacctcatt 91
              |||||||||||||||||||||
Sbjct: 128414 atatattacataaacctcatt 128394



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>gb|BC014149.2| Homo sapiens cDNA clone IMAGE:3613441, partial cds
          Length = 1326

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 428 cctcccctgtaaggtgggaat 448
           |||||||||||||||||||||
Sbjct: 938 cctcccctgtaaggtgggaat 958



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>emb|AL596450.8| Mouse DNA sequence from clone RP23-373H2 on chromosome 11 Contains the
             3' end of the Ddc gene for dopa decarboxylase, the Fignl1
             gene for fidgetin-like 1, the Znfn1a1 gene for zinc finger
             protein, subfamily 1A, 1 (Ikaros), two novel genes and two
             CpG islands, complete sequence
          Length = 203257

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 206   ctcggtgacataattccttca 226
             |||||||||||||||||||||
Sbjct: 39964 ctcggtgacataattccttca 39944



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>emb|AL670939.6| Mouse DNA sequence from clone RP23-59O12 on chromosome 4 Contains the 3'
              end of the Mpdz gene for multiple PDZ domain protein,
              complete sequence
          Length = 180629

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 154    ttattattattcagctccctc 174
              |||||||||||||||||||||
Sbjct: 166505 ttattattattcagctccctc 166485



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>gb|AY062650.1| Arabidopsis thaliana fatty acid multifunctional protein (AtMFP2)
            (At3g06860; F17A9.1) mRNA, complete cds
          Length = 2589

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 401  ccgatggaatctccccacaacatgacccctcccctgtaaggtgggaatcccat 453
            |||||||||||  |||| |||||||  ||||| ||||||||||| || |||||
Sbjct: 2179 ccgatggaatcagcccagaacatgattcctcctctgtaaggtggaaaacccat 2127



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>gb|AY062621.1| Arabidopsis thaliana fatty acid multifunctional protein (AtMFP2)
            (F17A9.1) mRNA, complete cds
          Length = 2535

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 401  ccgatggaatctccccacaacatgacccctcccctgtaaggtgggaatcccat 453
            |||||||||||  |||| |||||||  ||||| ||||||||||| || |||||
Sbjct: 2093 ccgatggaatcagcccagaacatgattcctcctctgtaaggtggaaaacccat 2041



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>gb|AF123254.1|AF123254 Arabidopsis thaliana MFP2 mRNA, complete cds
          Length = 2489

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 401  ccgatggaatctccccacaacatgacccctcccctgtaaggtgggaatcccat 453
            |||||||||||  |||| |||||||  ||||| ||||||||||| || |||||
Sbjct: 2036 ccgatggaatcagcccagaacatgattcctcctctgtaaggtggaaaacccat 1984



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>gb|AC017104.8| Homo sapiens BAC clone RP11-562I5 from 2, complete sequence
          Length = 168880

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 428  cctcccctgtaaggtgggaat 448
            |||||||||||||||||||||
Sbjct: 3143 cctcccctgtaaggtgggaat 3163



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>gb|AE002611.5| Drosophila melanogaster chromosome X, section 66 of 74 of the complete
              sequence
          Length = 297848

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 71     atatattacataaacctcatt 91
              |||||||||||||||||||||
Sbjct: 219276 atatattacataaacctcatt 219256



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>gb|AC153563.3| Mus musculus 10 BAC RP23-455D21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 171018

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 636   taatttcaggatcaggagttg 656
             |||||||||||||||||||||
Sbjct: 94485 taatttcaggatcaggagttg 94465



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>gb|AC127368.3| Mus musculus BAC clone RP23-22J14 from chromosome 18, complete sequence
          Length = 206102

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 379    cttttcgtggatgtattttg 398
              ||||||||||||||||||||
Sbjct: 117838 cttttcgtggatgtattttg 117819



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>gb|AC122488.3| Mus musculus BAC clone RP24-383B2 from chromosome 17, complete sequence
          Length = 206003

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 563    ttgtcacttagcttcatcaa 582
              ||||||||||||||||||||
Sbjct: 131061 ttgtcacttagcttcatcaa 131042



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>gb|AC003085.2| Homo sapiens BAC clone CTB-94H21 from 7, complete sequence
          Length = 124836

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    tgttgttattattattcagc 168
              ||||||||||||||||||||
Sbjct: 116265 tgttgttattattattcagc 116284



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>gb|AC142286.1| Pan troglodytes BAC clone RP43-169G24 from 7, complete sequence
          Length = 194546

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   tgttgttattattattcagc 168
             ||||||||||||||||||||
Sbjct: 28546 tgttgttattattattcagc 28527



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>gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosome 13, complete sequence
          Length = 199388

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 575    ttcatcaactcagcgtctggagtg 598
              ||||| ||||||||||||||||||
Sbjct: 125689 ttcataaactcagcgtctggagtg 125712



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>emb|AL928688.3| Human DNA sequence from clone RP11-77N10 on chromosome 10, complete
             sequence
          Length = 165910

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 611   ctcctagatttctgaatata 630
             ||||||||||||||||||||
Sbjct: 27662 ctcctagatttctgaatata 27643



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>emb|AL158157.8| Human DNA sequence from clone RP11-413D24 on chromosome 9, complete
              sequence
          Length = 183410

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    actaatcaccaccttcttca 195
              ||||||||||||||||||||
Sbjct: 171612 actaatcaccaccttcttca 171631



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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 179     aatcaccaccttcttcacgc 198
               ||||||||||||||||||||
Sbjct: 2267334 aatcaccaccttcttcacgc 2267353



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>emb|AJ000886.1|BNJ000886 Brassica napus multifunctional protein of glyoxysomal beta-oxidation
          Length = 2494

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 404  atggaatctccccacaacatgacccctcccctgtaaggtgggaatcccatgccaaa 459
            ||||||||  |||| |||||||  ||||| ||||||||||| || ||||| |||||
Sbjct: 2053 atggaatcagcccagaacatgattcctcctctgtaaggtggaaaacccattccaaa 1998



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>gb|AF275633.1|AF275633 Phanerochaete chrysosporium lipG/lipH intergenic region
          Length = 5242

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 496  aatgccctcatcaaggacac 515
            ||||||||||||||||||||
Sbjct: 5019 aatgccctcatcaaggacac 5038



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>gb|AE014847.1| Plasmodium falciparum 3D7 chromosome 12, section 4 of 9 of the complete
             sequence
          Length = 252650

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    atatattacataaacctcat 90
             ||||||||||||||||||||
Sbjct: 81124 atatattacataaacctcat 81143



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>emb|AL772166.15| Mouse DNA sequence from clone RP23-413I12 on chromosome 2, complete
              sequence
          Length = 184547

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    ttccttcagctgacagaaac 238
              ||||||||||||||||||||
Sbjct: 141436 ttccttcagctgacagaaac 141417



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>emb|AL110505.5|CNS01DRA Human chromosome 14 DNA sequence BAC R-816J8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 198441

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 157    ttattattcagctccctccactaa 180
              |||||||||| |||||||||||||
Sbjct: 173505 ttattattcatctccctccactaa 173482


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,219,430
Number of Sequences: 3902068
Number of extensions: 6219430
Number of successful extensions: 119018
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118854
Number of HSP's gapped (non-prelim): 157
length of query: 667
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 644
effective length of database: 17,143,297,704
effective search space: 11040283721376
effective search space used: 11040283721376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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