| Clone Name | rbags13o18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK073532.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046D12, full insert sequence Length = 1461 Score = 180 bits (91), Expect = 4e-42 Identities = 175/203 (86%) Strand = Plus / Minus Query: 480 agtctctcttctttcaaaagattgtggagctcagcacggcaatcgtcgagccttcggacg 539 ||||||||||||||||| ||||||||||| |||||||||||||| || ||||| | | | Sbjct: 1113 agtctctcttctttcaagagattgtggagttcagcacggcaatcatcaagcctcctaatg 1054 Query: 540 tcggaactatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatac 599 || |||||||| |||||||||||||| || ||||| ||||||||||| |||||||| || Sbjct: 1053 tctgaactatcaaccacccaaactagtccatcagtttgctcaaagtaattcctccagtaa 994 Query: 600 gaacggatggtcttctggcccccgacatcccatatgttcagcgagtacttttggtactgg 659 || ||||| |||||||| || |||| |||||||||||||| |||||||| ||||||| | Sbjct: 993 gatcggatagtcttctgtccaccgatatcccatatgttcaatgagtacttgtggtacttg 934 Query: 660 atggttttgatattaaagccgag 682 ||||| ||||| || |||||||| Sbjct: 933 atggtcttgatgttgaagccgag 911 Score = 54.0 bits (27), Expect = 6e-04 Identities = 81/99 (81%) Strand = Plus / Minus Query: 276 acgtagatgcgggaggcgatgtcctggaccagccagtcgaagccctggagcaggccatcg 335 |||||||| || || || ||||| ||||| ||||| ||||| || || || ||||| || Sbjct: 1317 acgtagatccgagatgcaatgtcttggacgagccaatcgaaaccttgaagaaggccctcc 1258 Query: 336 cccgtgtaggcgctgcagccgacgatcttccagtgccgg 374 || |||| ||||||||||| ||||||| |||||||||| Sbjct: 1257 ccggtgtgcgcgctgcagcctacgatctgccagtgccgg 1219
>ref|XM_506795.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0042G06.11 patrial mRNA Length = 1108 Score = 170 bits (86), Expect = 4e-39 Identities = 170/198 (85%) Strand = Plus / Minus Query: 485 ctcttctttcaaaagattgtggagctcagcacggcaatcgtcgagccttcggacgtcgga 544 |||||||||||| ||||||||||| |||||||||||||| || ||||| | | ||| || Sbjct: 1108 ctcttctttcaagagattgtggagttcagcacggcaatcatcaagcctcctaatgtctga 1049 Query: 545 actatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaacg 604 |||||| |||||||||||||| || ||||| ||||||||||| |||||||| || || || Sbjct: 1048 actatcaaccacccaaactagtccatcagtttgctcaaagtaattcctccagtaagatcg 989 Query: 605 gatggtcttctggcccccgacatcccatatgttcagcgagtacttttggtactggatggt 664 ||| |||||||| || |||| |||||||||||||| |||||||| ||||||| |||||| Sbjct: 988 gatagtcttctgtccaccgatatcccatatgttcaatgagtacttgtggtacttgatggt 929 Query: 665 tttgatattaaagccgag 682 ||||| || |||||||| Sbjct: 928 cttgatgttgaagccgag 911
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 141 bits (71), Expect = 3e-30 Identities = 134/155 (86%) Strand = Plus / Plus Query: 485 ctcttctttcaaaagattgtggagctcagcacggcaatcgtcgagccttcggacgtcgga 544 |||||||||||| ||||||||||| |||||||||||||| || ||||| | | ||| || Sbjct: 13181026 ctcttctttcaagagattgtggagttcagcacggcaatcatcaagcctcctaatgtctga 13181085 Query: 545 actatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaacg 604 |||||| |||||||||||||| || ||||| ||||||||||| |||||||| || || || Sbjct: 13181086 actatcaaccacccaaactagtccatcagtttgctcaaagtaattcctccagtaagatcg 13181145 Query: 605 gatggtcttctggcccccgacatcccatatgttca 639 ||| |||||||| || |||| |||||||||||||| Sbjct: 13181146 gatagtcttctgtccaccgatatcccatatgttca 13181180 Score = 54.0 bits (27), Expect = 6e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 276 acgtagatgcgggaggcgatgtcctggaccagccagtcgaagccctggagcaggccatcg 335 |||||||| || || || ||||| ||||| ||||| ||||| || || || ||||| || Sbjct: 13178293 acgtagatccgagatgcaatgtcttggacgagccaatcgaaaccttgaagaaggccctcc 13178352 Query: 336 cccgtgtaggcgctgcagccgacgatcttccagtgccgg 374 || |||| ||||||||||| ||||||| |||||||||| Sbjct: 13178353 ccggtgtgcgcgctgcagcctacgatctgccagtgccgg 13178391 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 tgtaggcgctgcagccgacga 360 ||||||||||||||||||||| Sbjct: 6678811 tgtaggcgctgcagccgacga 6678791
>dbj|AP005778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0042G06 Length = 123571 Score = 141 bits (71), Expect = 3e-30 Identities = 134/155 (86%) Strand = Plus / Plus Query: 485 ctcttctttcaaaagattgtggagctcagcacggcaatcgtcgagccttcggacgtcgga 544 |||||||||||| ||||||||||| |||||||||||||| || ||||| | | ||| || Sbjct: 51056 ctcttctttcaagagattgtggagttcagcacggcaatcatcaagcctcctaatgtctga 51115 Query: 545 actatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaacg 604 |||||| |||||||||||||| || ||||| ||||||||||| |||||||| || || || Sbjct: 51116 actatcaaccacccaaactagtccatcagtttgctcaaagtaattcctccagtaagatcg 51175 Query: 605 gatggtcttctggcccccgacatcccatatgttca 639 ||| |||||||| || |||| |||||||||||||| Sbjct: 51176 gatagtcttctgtccaccgatatcccatatgttca 51210 Score = 54.0 bits (27), Expect = 6e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 276 acgtagatgcgggaggcgatgtcctggaccagccagtcgaagccctggagcaggccatcg 335 |||||||| || || || ||||| ||||| ||||| ||||| || || || ||||| || Sbjct: 48323 acgtagatccgagatgcaatgtcttggacgagccaatcgaaaccttgaagaaggccctcc 48382 Query: 336 cccgtgtaggcgctgcagccgacgatcttccagtgccgg 374 || |||| ||||||||||| ||||||| |||||||||| Sbjct: 48383 ccggtgtgcgcgctgcagcctacgatctgccagtgccgg 48421
>ref|NM_127396.2| Arabidopsis thaliana TTN5 (TITAN 5); GTP binding AT2G18390 (TTN5) mRNA, complete cds Length = 1215 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 543 gaactatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaa 602 |||||||| ||||||||||| | ||| ||||||||||||||||| |||||||||||||| Sbjct: 451 gaactatcaaccacccaaaccaaaccatcagtctgctcaaagtaattcctccaatacgat 392 Query: 603 cggatggtcttctggcccccgacatcccatatgttcagcgagtacttttggta 655 | || ||||| || || || ||||||||||| || |||| ||||||||||| Sbjct: 391 cttatagtcttttgcccaccaacatcccatatatttagcgtatacttttggta 339 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 336 cccgtgtaggcgctgcagccgacgatcttccagtgccgg 374 |||||||| |||||||| || || ||||||||||||||| Sbjct: 658 cccgtgtatgcgctgcaacccactatcttccagtgccgg 620
>gb|AY063048.1| Arabidopsis thaliana putative ADP-ribosylation factor (At2g18390) mRNA, complete cds Length = 589 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 543 gaactatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaa 602 |||||||| ||||||||||| | ||| ||||||||||||||||| |||||||||||||| Sbjct: 281 gaactatcaaccacccaaaccaaaccatcagtctgctcaaagtaattcctccaatacgat 222 Query: 603 cggatggtcttctggcccccgacatcccatatgttcagcgagtacttttggta 655 | || ||||| || || || ||||||||||| || |||| ||||||||||| Sbjct: 221 cttatagtcttttgcccaccaacatcccatatatttagcgtatacttttggta 169 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 336 cccgtgtaggcgctgcagccgacgatcttccagtgccgg 374 |||||||| |||||||| || || ||||||||||||||| Sbjct: 488 cccgtgtatgcgctgcaacccactatcttccagtgccgg 450
>gb|AY035009.1| Arabidopsis thaliana putative ADP-ribosylation factor (At2g18390) mRNA, complete cds Length = 828 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 543 gaactatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaa 602 |||||||| ||||||||||| | ||| ||||||||||||||||| |||||||||||||| Sbjct: 408 gaactatcaaccacccaaaccaaaccatcagtctgctcaaagtaattcctccaatacgat 349 Query: 603 cggatggtcttctggcccccgacatcccatatgttcagcgagtacttttggta 655 | || ||||| || || || ||||||||||| || |||| ||||||||||| Sbjct: 348 cttatagtcttttgcccaccaacatcccatatatttagcgtatacttttggta 296 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 336 cccgtgtaggcgctgcagccgacgatcttccagtgccgg 374 |||||||| |||||||| || || ||||||||||||||| Sbjct: 615 cccgtgtatgcgctgcaacccactatcttccagtgccgg 577
>gb|AF486852.1| Arabidopsis thaliana ARL2 G-protein mRNA, complete cds Length = 558 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 543 gaactatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaa 602 |||||||| ||||||||||| | ||| ||||||||||||||||| |||||||||||||| Sbjct: 281 gaactatcaaccacccaaaccaaaccatcagtctgctcaaagtaattcctccaatacgat 222 Query: 603 cggatggtcttctggcccccgacatcccatatgttcagcgagtacttttggta 655 | || ||||| || || || ||||||||||| || |||| ||||||||||| Sbjct: 221 cttatagtcttttgcccaccaacatcccatatatttagcgtatacttttggta 169 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 336 cccgtgtaggcgctgcagccgacgatcttccagtgccgg 374 |||||||| |||||||| || || ||||||||||||||| Sbjct: 488 cccgtgtatgcgctgcaacccactatcttccagtgccgg 450
>gb|AY088331.1| Arabidopsis thaliana clone 5695 mRNA, complete sequence Length = 868 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 543 gaactatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaa 602 |||||||| ||||||||||| | ||| ||||||||||||||||| |||||||||||||| Sbjct: 451 gaactatcaaccacccaaaccaaaccatcagtctgctcaaagtaattcctccaatacgat 392 Query: 603 cggatggtcttctggcccccgacatcccatatgttcagcgagtacttttggta 655 | || ||||| || || || ||||||||||| || |||| ||||||||||| Sbjct: 391 cttatagtcttttgcccaccaacatcccatatatttagcgtatacttttggta 339 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 336 cccgtgtaggcgctgcagccgacgatcttccagtgccgg 374 |||||||| |||||||| || || ||||||||||||||| Sbjct: 658 cccgtgtatgcgctgcaacccactatcttccagtgccgg 620
>emb|BX821743.1|CNS0A8A5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZB03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 841 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 543 gaactatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaa 602 |||||||| ||||||||||| | ||| ||||||||||||||||| |||||||||||||| Sbjct: 411 gaactatcaaccacccaaaccaaaccatcagtctgctcaaagtaattcctccaatacgat 352 Query: 603 cggatggtcttctggcccccgacatcccatatgttcagcgagtacttttggta 655 | || || || || || || ||||||||||| || |||| ||||||||||| Sbjct: 351 cttatagtgttttgcccaccaacatcccatatatttagcgtatacttttggta 299 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 336 cccgtgtaggcgctgcagccgacgatcttccagtgccgg 374 |||||||| |||||||| || || ||||||||||||||| Sbjct: 622 cccgtgtatgcgctgcaacccactatcttccagtgccgg 584
>gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map mi39, complete sequence Length = 92861 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 543 gaactatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaa 602 |||||||| ||||||||||| | ||| ||||||||||||||||| |||||||||||||| Sbjct: 26651 gaactatcaaccacccaaaccaaaccatcagtctgctcaaagtaattcctccaatacgat 26710 Query: 603 cggatggtcttctggcccccgacatcccatat 634 | || ||||| || || || ||||||||||| Sbjct: 26711 cttatagtcttttgcccaccaacatcccatat 26742 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Plus Query: 336 cccgtgtaggcgctgcagccgacgatcttccagtgccgg 374 |||||||| |||||||| || || ||||||||||||||| Sbjct: 26161 cccgtgtatgcgctgcaacccactatcttccagtgccgg 26199
>dbj|AK106567.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-G01, full insert sequence Length = 925 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 595 aatacgaacggatggtcttctggcccccgacatcccatatgttcagcgagtacttttggt 654 ||||||| ||||| |||||||| || || |||||||||||||||| ||| |||| |||| Sbjct: 357 aatacgatcggattgtcttctgtccacccacatcccatatgttcaaagagaacttgtggt 298 Query: 655 actggatggttttgat 670 ||| |||||| ||||| Sbjct: 297 acttgatggtcttgat 282
>ref|XM_782272.1| PREDICTED: Strongylocentrotus purpuratus similar to ADP-ribosylation factor-like protein 2 (LOC582316), mRNA Length = 591 Score = 61.9 bits (31), Expect = 3e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||||||| || ||||||| | |||||| || || |||||||||||||| Sbjct: 282 ctcaaagtagttcctccagtaagaacggagcgacttctgaccacctacatcccatatgtt 223 Query: 638 cag 640 ||| Sbjct: 222 cag 220
>ref|XM_747773.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g14970) partial mRNA Length = 546 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 573 gtctgctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccat 632 |||| |||||||||||| ||||||| || || | ||| ||||| |||||||| |||||| Sbjct: 245 gtcttctcaaagtagtttttccaatatgaccgaagggttttctgccccccgacgtcccat 186 Query: 633 atgttca 639 ||||||| Sbjct: 185 atgttca 179
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 54.0 bits (27), Expect = 6e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 276 acgtagatgcgggaggcgatgtcctggaccagccagtcgaagccctggagcaggccatcg 335 |||||||| || || || ||||| ||||| ||||| ||||| || || || ||||| || Sbjct: 154870 acgtagatccgagatgcaatgtcttggacgagccaatcgaaaccttgaagaaggccctcc 154929 Query: 336 cccgtgtaggcgctgcagccgacgatcttccagtgccgg 374 || |||| ||||||||||| ||||||| |||||||||| Sbjct: 154930 ccggtgtgcgcgctgcagcctacgatctgccagtgccgg 154968
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 595 aatacgaacggatggtcttctggcccccgacatcccatatgttca 639 ||||||| ||||| |||||||| || || |||||||||||||||| Sbjct: 27098355 aatacgatcggattgtcttctgtccacccacatcccatatgttca 27098399
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 595 aatacgaacggatggtcttctggcccccgacatcccatatgttca 639 ||||||| ||||| |||||||| || || |||||||||||||||| Sbjct: 27023951 aatacgatcggattgtcttctgtccacccacatcccatatgttca 27023995
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 595 aatacgaacggatggtcttctggcccccgacatcccatatgttca 639 ||||||| ||||| |||||||| || || |||||||||||||||| Sbjct: 57882 aatacgatcggattgtcttctgtccacccacatcccatatgttca 57838
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 595 aatacgaacggatggtcttctggcccccgacatcccatatgttca 639 ||||||| ||||| |||||||| || || |||||||||||||||| Sbjct: 37250 aatacgatcggattgtcttctgtccacccacatcccatatgttca 37294
>ref|NM_019722.3| Mus musculus ADP-ribosylation factor-like 2 (Arl2), mRNA Length = 869 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||||||| || || || | | ||||||||| || |||||||| ||||| Sbjct: 282 ctcaaagtagttcctccagtaggagcgcagagacttctggccacctacatcccagatgtt 223 Query: 638 cagc 641 |||| Sbjct: 222 cagc 219
>ref|NM_001667.1| Homo sapiens ADP-ribosylation factor-like 2 (ARL2), mRNA Length = 902 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 257 ctcaaagtagttccgccagtaggaccgcagggacttctggccacccacatcccagatgtt 198 Query: 638 cagc 641 |||| Sbjct: 197 cagc 194
>gb|BC060259.1| Mus musculus ADP-ribosylation factor-like 2, mRNA (cDNA clone MGC:69604 IMAGE:5709669), complete cds Length = 931 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||||||| || || || | | ||||||||| || |||||||| ||||| Sbjct: 272 ctcaaagtagttcctccagtaggagcgcagagacttctggccacctacatcccagatgtt 213 Query: 638 cagc 641 |||| Sbjct: 212 cagc 209
>gb|AF143680.1| Mus musculus arf-like protein 2 (ARL2) mRNA, complete cds Length = 555 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||||||| || || || | | ||||||||| || |||||||| ||||| Sbjct: 246 ctcaaagtagttcctccagtaggagcgcagagacttctggccacctacatcccagatgtt 187 Query: 638 cagc 641 |||| Sbjct: 186 cagc 183
>ref|XM_861614.1| PREDICTED: Canis familiaris similar to ADP-ribosylation factor-like protein 2, transcript variant 2 (LOC483753), mRNA Length = 543 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 313 ctcaaagtagttccgccagtaggaccgcaaggacttctggcctcccacatcccagatgtt 254 Query: 638 cagc 641 |||| Sbjct: 253 cagc 250
>ref|XM_540874.2| PREDICTED: Canis familiaris similar to ADP-ribosylation factor-like protein 2, transcript variant 1 (LOC483753), mRNA Length = 981 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 313 ctcaaagtagttccgccagtaggaccgcaaggacttctggcctcccacatcccagatgtt 254 Query: 638 cagc 641 |||| Sbjct: 253 cagc 250
>gb|AC131114.3| Mus musculus BAC clone RP24-212G16 from chromosome 19, complete sequence Length = 160122 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||||||| || || || | | ||||||||| || |||||||| ||||| Sbjct: 45513 ctcaaagtagttcctccagtaggagcgcagagacttctggccacctacatcccagatgtt 45454 Query: 638 cagc 641 |||| Sbjct: 45453 cagc 45450
>gb|BT008026.1| Synthetic construct Homo sapiens ADP-ribosylation factor-like 2 mRNA, partial cds Length = 555 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 246 ctcaaagtagttccgccagtaggaccgcagggacttctggccacccacatcccagatgtt 187 Query: 638 cagc 641 |||| Sbjct: 186 cagc 183
>gb|BT006674.1| Homo sapiens ADP-ribosylation factor-like 2 mRNA, complete cds Length = 555 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 246 ctcaaagtagttccgccagtaggaccgcagggacttctggccacccacatcccagatgtt 187 Query: 638 cagc 641 |||| Sbjct: 186 cagc 183
>ref|NM_001038079.1| Bos taurus ADP-ribosylation factor-like 2 (ARL2), mRNA Length = 1216 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 545 ctcaaagtagttccgccagtaggaccgcagggacttctggccgcccacatcccaaatgtt 486 Query: 638 cagc 641 |||| Sbjct: 485 cagc 482
>gb|AC152422.15| Medicago truncatula clone mth2-48d4, complete sequence Length = 87210 Score = 48.1 bits (24), Expect = 0.038 Identities = 66/80 (82%) Strand = Plus / Minus Query: 555 acccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaacggatggtcttc 614 |||||||| | ||| || || |||||||||||||| ||||| || || || ||||| || Sbjct: 37288 acccaaaccaaaccatctgtttgctcaaagtagtttctccagtaagatcgaatggttttt 37229 Query: 615 tggcccccgacatcccatat 634 ||||| || ||||||||||| Sbjct: 37228 tggcctccaacatcccatat 37209
>dbj|AK096447.1| Homo sapiens cDNA FLJ39128 fis, clone NTONG2007658, highly similar to Homo sapiens sorting nexin 15 (SNX15) mRNA Length = 2396 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 274 ctcaaagtagttccgccagtaggaccgcagggacttctggccacccacatcccagatgtt 215 Query: 638 cagc 641 |||| Sbjct: 214 cagc 211
>gb|AF493888.1| Homo sapiens ADP-ribosylation factor-like protein 2 (ARL2) mRNA, complete cds Length = 555 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 246 ctcaaagtagttccgccagtaggaccgcagggacttctggccacccacatcccagatgtt 187 Query: 638 cagc 641 |||| Sbjct: 186 cagc 183
>gb|BC111133.1| Bos taurus cDNA clone MGC:134005 IMAGE:8054703, complete cds Length = 1216 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 545 ctcaaagtagttccgccagtaggaccgcagggacttctggccgcccacatcccaaatgtt 486 Query: 638 cagc 641 |||| Sbjct: 485 cagc 482
>gb|BC052938.1| Mus musculus ADP-ribosylation factor-like 2, mRNA (cDNA clone IMAGE:30017862), with apparent retained intron Length = 2313 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||||||| || || || | | ||||||||| || |||||||| ||||| Sbjct: 261 ctcaaagtagttcctccagtaggagcgcagagacttctggccacctacatcccagatgtt 202 Query: 638 cagc 641 |||| Sbjct: 201 cagc 198
>gb|BC080803.1| Mus musculus ADP-ribosylation factor-like 2, mRNA (cDNA clone IMAGE:5363634), with apparent retained intron Length = 2309 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||||||| || || || | | ||||||||| || |||||||| ||||| Sbjct: 285 ctcaaagtagttcctccagtaggagcgcagagacttctggccacctacatcccagatgtt 226 Query: 638 cagc 641 |||| Sbjct: 225 cagc 222
>dbj|AK011366.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610009M23 product:arf-like protein 2 (ARL2) mRNA, full insert sequence Length = 869 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||||||| || || || | | ||||||||| || |||||||| ||||| Sbjct: 282 ctcaaagtagttcctccagtaggagcgcagagacttctggccacctacatcccagatgtt 223 Query: 638 cagc 641 |||| Sbjct: 222 cagc 219
>dbj|AK223502.1| Homo sapiens mRNA for ADP-ribosylation factor-like 2 variant, clone: FCC121D06 Length = 663 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 319 ctcaaagtagttccgccagtaggaccgcagggacttctggccacccacatcccagatgtt 260 Query: 638 cagc 641 |||| Sbjct: 259 cagc 256
>gb|AY891824.1| Synthetic construct Homo sapiens clone FLH025316.01L ADP-ribosylation factor-like 2 (ARL2) mRNA, partial cds Length = 555 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 246 ctcaaagtagttccgccagtaggaccgcagggacttctggccacccacatcccagatgtt 187 Query: 638 cagc 641 |||| Sbjct: 186 cagc 183
>gb|AY889335.1| Synthetic construct Homo sapiens clone FLH025321.01X ADP-ribosylation factor-like 2 (ARL2) mRNA, complete cds Length = 555 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 246 ctcaaagtagttccgccagtaggaccgcagggacttctggccacccacatcccagatgtt 187 Query: 638 cagc 641 |||| Sbjct: 186 cagc 183
>gb|AY889334.1| Synthetic construct Homo sapiens clone FLH025320.01X ADP-ribosylation factor-like 2 (ARL2) mRNA, complete cds Length = 555 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 246 ctcaaagtagttccgccagtaggaccgcagggacttctggccacccacatcccagatgtt 187 Query: 638 cagc 641 |||| Sbjct: 186 cagc 183
>gb|BC002530.2| Homo sapiens ADP-ribosylation factor-like 2, mRNA (cDNA clone MGC:1800 IMAGE:3140402), complete cds Length = 956 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 273 ctcaaagtagttccgccagtaggaccgcagggacttctggccacccacatcccagatgtt 214 Query: 638 cagc 641 |||| Sbjct: 213 cagc 210
>gb|L13687.1|HUMARL2X Homo sapiens ADP-ribosylation factor-like protein 2 (ARL2) mRNA, complete cds Length = 902 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 257 ctcaaagtagttccgccagtaggaccgcagggacttctggccacccacatcccagatgtt 198 Query: 638 cagc 641 |||| Sbjct: 197 cagc 194
>gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, complete sequence Length = 236246 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||||||| || || || | | ||||||||| || |||||||| ||||| Sbjct: 16264 ctcaaagtagttcctccagtaggagcgcagagacttctggccacctacatcccagatgtt 16205 Query: 638 cagc 641 |||| Sbjct: 16204 cagc 16201
>dbj|AP000436.5| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-34H12, complete sequences Length = 117166 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||||| ||| || || || | || ||||||||| || |||||||| ||||| Sbjct: 76447 ctcaaagtagttccgccagtaggaccgcagggacttctggccacccacatcccagatgtt 76388 Query: 638 cagc 641 |||| Sbjct: 76387 cagc 76384
>ref|NM_057538.2| Drosophila melanogaster ADP ribosylation factor 84F CG7435-RA (Arf84F), mRNA Length = 670 Score = 46.1 bits (23), Expect = 0.15 Identities = 77/95 (81%) Strand = Plus / Minus Query: 546 ctatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaacgg 605 |||||||||||||| || ||||| ||||| ||| |||||||| ||||| || || || Sbjct: 357 ctatccaccacccagaccagaccatcagtggactcgaagtagtttctccagtaggatcgc 298 Query: 606 atggtcttctggcccccgacatcccatatgttcag 640 | | ||||||||| ||||||||||| || ||||| Sbjct: 297 agagacttctggccaccgacatcccacatattcag 263
>gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, region 85A-85A, BAC clone BACR33N15, complete sequence Length = 187701 Score = 46.1 bits (23), Expect = 0.15 Identities = 77/95 (81%) Strand = Plus / Plus Query: 546 ctatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaacgg 605 |||||||||||||| || ||||| ||||| ||| |||||||| ||||| || || || Sbjct: 119534 ctatccaccacccagaccagaccatcagtggactcgaagtagtttctccagtaggatcgc 119593 Query: 606 atggtcttctggcccccgacatcccatatgttcag 640 | | ||||||||| ||||||||||| || ||||| Sbjct: 119594 agagacttctggccaccgacatcccacatattcag 119628
>gb|AE003678.3| Drosophila melanogaster chromosome 3R, section 16 of 118 of the complete sequence Length = 244757 Score = 46.1 bits (23), Expect = 0.15 Identities = 77/95 (81%) Strand = Plus / Minus Query: 546 ctatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaacgg 605 |||||||||||||| || ||||| ||||| ||| |||||||| ||||| || || || Sbjct: 142347 ctatccaccacccagaccagaccatcagtggactcgaagtagtttctccagtaggatcgc 142288 Query: 606 atggtcttctggcccccgacatcccatatgttcag 640 | | ||||||||| ||||||||||| || ||||| Sbjct: 142287 agagacttctggccaccgacatcccacatattcag 142253
>gb|L14923.1|DROARF Drosophila melanogaster GTP-binding protein (ARF-like Arl84F) gene, complete cds Length = 894 Score = 46.1 bits (23), Expect = 0.15 Identities = 77/95 (81%) Strand = Plus / Minus Query: 546 ctatccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaacgg 605 |||||||||||||| || ||||| ||||| ||| |||||||| ||||| || || || Sbjct: 385 ctatccaccacccagaccagaccatcagtggactcgaagtagtttctccagtaggatcgc 326 Query: 606 atggtcttctggcccccgacatcccatatgttcag 640 | | ||||||||| ||||||||||| || ||||| Sbjct: 325 agagacttctggccaccgacatcccacatattcag 291
>gb|AC099047.2| Homo sapiens chromosome 3 clone RP11-73I17, complete sequence Length = 184296 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 154 ctacattaaacatgggagtgca 175 |||||||||||||||||||||| Sbjct: 24910 ctacattaaacatgggagtgca 24931 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 ctacattaaacatgggagtgca 100 |||||||||||||||||||||| Sbjct: 24910 ctacattaaacatgggagtgca 24931 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 ctacattaaacatgggagtgca 26 |||||||||||||||||||||| Sbjct: 24910 ctacattaaacatgggagtgca 24931
>ref|XM_464681.1| Oryza sativa (japonica cultivar-group), mRNA Length = 813 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 tgtaggcgctgcagccgacga 360 ||||||||||||||||||||| Sbjct: 769 tgtaggcgctgcagccgacga 749
>gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, complete sequence Length = 156547 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 ttgatctcagattttacatacatat 59 |||||||||||||||| |||||||| Sbjct: 110851 ttgatctcagattttatatacatat 110827
>gb|AY658701.1| Synthetic construct Peudomonas aeruginosa clone FLH034833.01F PA5180 gene, partial cds Length = 840 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gtcgaagccctggagcaggcc 331 ||||||||||||||||||||| Sbjct: 382 gtcgaagccctggagcaggcc 402
>gb|AC145800.2| Xenopus tropicalis clone CH216-60E16, complete sequence Length = 159689 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 42 cagattttacatacatattacatga 66 ||||| ||||||||||||||||||| Sbjct: 57240 cagatattacatacatattacatga 57216 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 cagattttacatacatattacatga 216 ||||| ||||||||||||||||||| Sbjct: 57240 cagatattacatacatattacatga 57216 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 cagattttacatacatattacatga 141 ||||| ||||||||||||||||||| Sbjct: 57240 cagatattacatacatattacatga 57216
>emb|CR657501.2|CNS0F6AR Tetraodon nigroviridis full-length cDNA Length = 782 Score = 42.1 bits (21), Expect = 2.4 Identities = 75/93 (80%) Strand = Plus / Minus Query: 549 tccaccacccaaactagaccgtcagtctgctcaaagtagttcctccaatacgaacggatg 608 ||||||||||| || || ||||| || ||| |||||||||||||| || || || | | Sbjct: 354 tccaccacccacaccagcccgtcggtgctctcgaagtagttcctccagtaggagcgcagg 295 Query: 609 gtcttctggcccccgacatcccatatgttcagc 641 | |||||||||||| || ||||| || |||||| Sbjct: 294 gacttctggccccccacgtcccaaatattcagc 262
>ref|XM_504946.1| Yarrowia lipolytica CLIB122, YALI0F03410g predicted mRNA Length = 3354 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 accttggcgatttcgtcaggc 422 ||||||||||||||||||||| Sbjct: 223 accttggcgatttcgtcaggc 243
>emb|AL031683.2|HS881E24 Human DNA sequence from clone RP5-881E24 on chromosome 20p12 Contains part of the PLCB1 gene for phospholipase C beta 1 (phosphoinositide-specific), complete sequence Length = 115611 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 gatgtcctggaccagccagtc 313 ||||||||||||||||||||| Sbjct: 24978 gatgtcctggaccagccagtc 24958
>gb|AC161418.4| Mus musculus BAC clone RP23-325K2 from chromosome 3, complete sequence Length = 202765 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 569 gtcagtctgctcaaagtagtt 589 ||||||||||||||||||||| Sbjct: 92285 gtcagtctgctcaaagtagtt 92265
>gb|AE004931.1| Pseudomonas aeruginosa PAO1, section 492 of 529 of the complete genome Length = 11427 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gtcgaagccctggagcaggcc 331 ||||||||||||||||||||| Sbjct: 1477 gtcgaagccctggagcaggcc 1497
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 tgtaggcgctgcagccgacga 360 ||||||||||||||||||||| Sbjct: 113186 tgtaggcgctgcagccgacga 113166
>emb|AL079303.3|CNS00M8O Human chromosome 14 DNA sequence BAC R-964E11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 199891 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 tctacattaaacatgggagtgcaaa 28 |||||| |||||||||||||||||| Sbjct: 53644 tctacagtaaacatgggagtgcaaa 53620 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 tctacattaaacatgggagtgcaaa 102 |||||| |||||||||||||||||| Sbjct: 53644 tctacagtaaacatgggagtgcaaa 53620 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 tctacattaaacatgggagtgcaaa 177 |||||| |||||||||||||||||| Sbjct: 53644 tctacagtaaacatgggagtgcaaa 53620
>gb|DQ288864.1| Sparus aurata stPrP1 mRNA, complete cds Length = 1915 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 650 ttggtactggatggttttgat 670 ||||||||||||||||||||| Sbjct: 264 ttggtactggatggttttgat 244
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 402 accttggcgatttcgtcaggc 422 ||||||||||||||||||||| Sbjct: 481676 accttggcgatttcgtcaggc 481656
>ref|NM_004535.2| Homo sapiens myelin transcription factor 1 (MYT1), mRNA Length = 5550 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cctggagcaggccatcgccc 338 |||||||||||||||||||| Sbjct: 1504 cctggagcaggccatcgccc 1523
>gb|AC120237.5| Rattus norvegicus 1 BAC CH230-453N3 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 150760 Score = 40.1 bits (20), Expect = 9.3 Identities = 50/60 (83%) Strand = Plus / Plus Query: 582 aagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgttcagc 641 |||||||||||||| || || || | | ||||||||| || |||||||| ||||||||| Sbjct: 26199 aagtagttcctccagtaggagcgcagagacttctggccacccacatcccagatgttcagc 26258
>gb|AC182645.3| Pan troglodytes BAC clone CH251-7F19 from chromosome 10, complete sequence Length = 221731 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 taaacatgggagtgcaaaac 104 |||||||||||||||||||| Sbjct: 189608 taaacatgggagtgcaaaac 189627 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 taaacatgggagtgcaaaac 179 |||||||||||||||||||| Sbjct: 189608 taaacatgggagtgcaaaac 189627 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 taaacatgggagtgcaaaac 30 |||||||||||||||||||| Sbjct: 189608 taaacatgggagtgcaaaac 189627
>ref|NM_001032445.1| Ciona intestinalis Ci-META6 (meta6), mRNA Length = 375 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 ctcttctttcaaaagattgtggag 508 ||||||||||||||||||| |||| Sbjct: 275 ctcttctttcaaaagattgaggag 252
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 tgcagccgacgatcttccagtgcc 372 ||||||||||||||||| |||||| Sbjct: 1751862 tgcagccgacgatcttcgagtgcc 1751885
>gb|AC123811.3| Mus musculus BAC clone RP24-179L19 from chromosome 9, complete sequence Length = 204171 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 attttacatacatattacat 214 |||||||||||||||||||| Sbjct: 53613 attttacatacatattacat 53632 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 attttacatacatattacat 139 |||||||||||||||||||| Sbjct: 53613 attttacatacatattacat 53632 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 attttacatacatattacat 64 |||||||||||||||||||| Sbjct: 53613 attttacatacatattacat 53632
>gb|AC134099.2| Homo sapiens 3 BAC RP11-221B6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153726 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 tacattaaacatgggagtgcaaaa 29 |||| ||||||||||||||||||| Sbjct: 147686 tacaataaacatgggagtgcaaaa 147709 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 tacattaaacatgggagtgcaaaa 103 |||| ||||||||||||||||||| Sbjct: 147686 tacaataaacatgggagtgcaaaa 147709 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 tacattaaacatgggagtgcaaaa 178 |||| ||||||||||||||||||| Sbjct: 147686 tacaataaacatgggagtgcaaaa 147709
>gb|AC145817.1| Pan troglodytes BAC clone RP43-6C4 from 7, complete sequence Length = 134049 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ctacattaaacatgggagtgcaaa 177 ||||| |||||||||||||||||| Sbjct: 11601 ctacagtaaacatgggagtgcaaa 11624 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ctacattaaacatgggagtgcaaa 28 ||||| |||||||||||||||||| Sbjct: 11601 ctacagtaaacatgggagtgcaaa 11624 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctacattaaacatgggagtgcaaa 102 ||||| |||||||||||||||||| Sbjct: 11601 ctacagtaaacatgggagtgcaaa 11624
>gb|AC137522.11| Medicago truncatula clone mth2-9h8, complete sequence Length = 117720 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 tcatcagattttacatacatatta 136 |||||||||||||| ||||||||| Sbjct: 88192 tcatcagattttacttacatatta 88169 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tcatcagattttacatacatatta 211 |||||||||||||| ||||||||| Sbjct: 88192 tcatcagattttacttacatatta 88169
>gb|BC053638.1| Homo sapiens myelin transcription factor 1, mRNA (cDNA clone IMAGE:4933873), partial cds Length = 4362 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cctggagcaggccatcgccc 338 |||||||||||||||||||| Sbjct: 235 cctggagcaggccatcgccc 254
>emb|AL591501.7| Human DNA sequence from clone RP11-305F18 on chromosome X Contains the 3' end of a novel gene, complete sequence Length = 174803 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ctacattaaacatgggagtg 24 |||||||||||||||||||| Sbjct: 142109 ctacattaaacatgggagtg 142090 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ctacattaaacatgggagtg 173 |||||||||||||||||||| Sbjct: 142109 ctacattaaacatgggagtg 142090 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctacattaaacatgggagtg 98 |||||||||||||||||||| Sbjct: 142109 ctacattaaacatgggagtg 142090
>emb|AL592104.6| Human DNA sequence from clone RP11-428K13 on chromosome 1 Contains a pseudogene similar to part of caspase 3 apoptosis-related cysteine protease (CASP3), complete sequence Length = 131489 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ctacattaaacatgggagtgcaaa 177 ||||| |||||||||||||||||| Sbjct: 61564 ctacaataaacatgggagtgcaaa 61587 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ctacattaaacatgggagtgcaaa 28 ||||| |||||||||||||||||| Sbjct: 61564 ctacaataaacatgggagtgcaaa 61587 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctacattaaacatgggagtgcaaa 102 ||||| |||||||||||||||||| Sbjct: 61564 ctacaataaacatgggagtgcaaa 61587
>emb|AL590653.11| Human DNA sequence from clone RP11-142B3 on chromosome 1 Contains part of the gene for melanoma antigen recognized by T cells 2 protein (MART2), complete sequence Length = 116103 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ctacattaaacatgggagtgcaaa 28 ||||| |||||||||||||||||| Sbjct: 106417 ctacagtaaacatgggagtgcaaa 106440 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ctacattaaacatgggagtgcaaa 177 ||||| |||||||||||||||||| Sbjct: 106417 ctacagtaaacatgggagtgcaaa 106440 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctacattaaacatgggagtgcaaa 102 ||||| |||||||||||||||||| Sbjct: 106417 ctacagtaaacatgggagtgcaaa 106440
>emb|AL590131.8| Human DNA sequence from clone RP13-102H20 on chromosome X Contains gene FLJ30058, the 5' end of a novel gene and four CpG islands, complete sequence Length = 146343 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ctacattaaacatgggagtgcaaa 177 ||||| |||||||||||||||||| Sbjct: 82050 ctacaataaacatgggagtgcaaa 82073 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ctacattaaacatgggagtgcaaa 28 ||||| |||||||||||||||||| Sbjct: 82050 ctacaataaacatgggagtgcaaa 82073 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctacattaaacatgggagtgcaaa 102 ||||| |||||||||||||||||| Sbjct: 82050 ctacaataaacatgggagtgcaaa 82073
>emb|AL512363.11| Human DNA sequence from clone RP11-524H19 on chromosome 6 Contains the 3' end of transforming protein P21A (K-RAS) (C-K-RAS) pseudogene, a novel gene, the 5' end of the gene for a novel protein and a CpG island, complete sequence Length = 113075 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ctacattaaacatgggagtgcaaa 28 ||||| |||||||||||||||||| Sbjct: 40572 ctacaataaacatgggagtgcaaa 40595 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctacattaaacatgggagtgcaaa 102 ||||| |||||||||||||||||| Sbjct: 40572 ctacaataaacatgggagtgcaaa 40595 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ctacattaaacatgggagtgcaaa 177 ||||| |||||||||||||||||| Sbjct: 40572 ctacaataaacatgggagtgcaaa 40595
>emb|AL512510.13| Human DNA sequence from clone RP11-537P24 on chromosome 6 Contains a CpG island, complete sequence Length = 170970 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 ctacattaaacatgggagtgcaaa 177 ||||| |||||||||||||||||| Sbjct: 88648 ctacaataaacatgggagtgcaaa 88625 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 ctacattaaacatgggagtgcaaa 28 ||||| |||||||||||||||||| Sbjct: 88648 ctacaataaacatgggagtgcaaa 88625 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctacattaaacatgggagtgcaaa 102 ||||| |||||||||||||||||| Sbjct: 88648 ctacaataaacatgggagtgcaaa 88625
>emb|AL390722.10| Human DNA sequence from clone RP11-474J1 on chromosome 13, complete sequence Length = 118499 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctacattaaacatgggagtgcaaa 102 ||||| |||||||||||||||||| Sbjct: 38540 ctacaataaacatgggagtgcaaa 38563 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ctacattaaacatgggagtgcaaa 177 ||||| |||||||||||||||||| Sbjct: 38540 ctacaataaacatgggagtgcaaa 38563 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ctacattaaacatgggagtgcaaa 28 ||||| |||||||||||||||||| Sbjct: 38540 ctacaataaacatgggagtgcaaa 38563
>emb|AL355977.11| Human DNA sequence from clone RP11-735G18 on chromosome 10, complete sequence Length = 171367 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tctcagattttacatacata 58 |||||||||||||||||||| Sbjct: 92366 tctcagattttacatacata 92347
>emb|AL138776.10| Human DNA sequence from clone RP11-20H6 on chromosome 1q25.1-31.1 Contains the 3' end of the RGSL1 gene for regulator of G-protein signalling like 1, the RNASEL gene for ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) and a CpG island, complete sequence Length = 100549 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ctacattaaacatgggagtgcaaa 177 ||||| |||||||||||||||||| Sbjct: 48110 ctacaataaacatgggagtgcaaa 48133 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ctacattaaacatgggagtgcaaa 28 ||||| |||||||||||||||||| Sbjct: 48110 ctacaataaacatgggagtgcaaa 48133 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctacattaaacatgggagtgcaaa 102 ||||| |||||||||||||||||| Sbjct: 48110 ctacaataaacatgggagtgcaaa 48133
>emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022E24 on chromosome 20 Contains the 3' end of the OPRL1 gene for opiate receptor-like 1 protein, the GPR8 gene encoding a G protein-coupled receptor, the KIAA0835 gene encoding a protein similar to the myelin transcription factor 1 (MYT1), a novel gene, 7 CpG islands, ESTs, STSs and GSSs, complete sequence Length = 179888 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cctggagcaggccatcgccc 338 |||||||||||||||||||| Sbjct: 113382 cctggagcaggccatcgccc 113401
>emb|Y12708.1|RNARL184 R.norvegicus mRNA for ADP-ribosylation factor-like protein ARL184 Length = 893 Score = 40.1 bits (20), Expect = 9.3 Identities = 50/60 (83%) Strand = Plus / Minus Query: 582 aagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgttcagc 641 |||||||||||||| || || || | | ||||||||| || |||||||| ||||||||| Sbjct: 272 aagtagttcctccagtaggagcgcagagacttctggccacccacatcccagatgttcagc 213
>dbj|AB028973.1| Homo sapiens mRNA for KIAA1050 protein, partial cds Length = 5969 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cctggagcaggccatcgccc 338 |||||||||||||||||||| Sbjct: 264 cctggagcaggccatcgccc 283
>gb|AC108464.5| Homo sapiens BAC clone RP11-195N23 from 4, complete sequence Length = 33398 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ctacattaaacatgggagtgcaaa 28 ||||| |||||||||||||||||| Sbjct: 6131 ctacaataaacatgggagtgcaaa 6154 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctacattaaacatgggagtgcaaa 102 ||||| |||||||||||||||||| Sbjct: 6131 ctacaataaacatgggagtgcaaa 6154 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ctacattaaacatgggagtgcaaa 177 ||||| |||||||||||||||||| Sbjct: 6131 ctacaataaacatgggagtgcaaa 6154
>gb|AC105901.2| Homo sapiens chromosome 3 clone RP11-437B5, complete sequence Length = 186224 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 tctacattaaacatgggagtgcaa 176 |||||| ||||||||||||||||| Sbjct: 22915 tctacaataaacatgggagtgcaa 22892 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 tctacattaaacatgggagtgcaa 101 |||||| ||||||||||||||||| Sbjct: 22915 tctacaataaacatgggagtgcaa 22892 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 tctacattaaacatgggagtgcaa 27 |||||| ||||||||||||||||| Sbjct: 22915 tctacaataaacatgggagtgcaa 22892
>gb|AC182491.2| Pan troglodytes BAC clone CH251-394K8 from chromosome 10, complete sequence Length = 168541 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 taaacatgggagtgcaaaac 179 |||||||||||||||||||| Sbjct: 33194 taaacatgggagtgcaaaac 33213 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 taaacatgggagtgcaaaac 30 |||||||||||||||||||| Sbjct: 33194 taaacatgggagtgcaaaac 33213 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 taaacatgggagtgcaaaac 104 |||||||||||||||||||| Sbjct: 33194 taaacatgggagtgcaaaac 33213
>gb|AC080166.6| Homo sapiens BAC clone RP11-813C7 from 2, complete sequence Length = 179961 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 ctacattaaacatgggagtgcaaa 28 ||||| |||||||||||||||||| Sbjct: 128978 ctacaataaacatgggagtgcaaa 128955 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 ctacattaaacatgggagtgcaaa 177 ||||| |||||||||||||||||| Sbjct: 128978 ctacaataaacatgggagtgcaaa 128955 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctacattaaacatgggagtgcaaa 102 ||||| |||||||||||||||||| Sbjct: 128978 ctacaataaacatgggagtgcaaa 128955
>gb|AC116351.2| Homo sapiens chromosome 5 clone RP11-43F13, complete sequence Length = 187289 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 agccctggagcaggccatcg 335 |||||||||||||||||||| Sbjct: 8745 agccctggagcaggccatcg 8764
>gb|AC134507.2| Homo sapiens 3 BAC RP11-674K24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114169 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 tacattaaacatgggagtgcaaaa 29 |||| ||||||||||||||||||| Sbjct: 33089 tacaataaacatgggagtgcaaaa 33066 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 tacattaaacatgggagtgcaaaa 103 |||| ||||||||||||||||||| Sbjct: 33089 tacaataaacatgggagtgcaaaa 33066 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 tacattaaacatgggagtgcaaaa 178 |||| ||||||||||||||||||| Sbjct: 33089 tacaataaacatgggagtgcaaaa 33066
>ref|NM_031711.1| Rattus norvegicus ADP-ribosylation factor-like 2 (Arl2), mRNA Length = 893 Score = 40.1 bits (20), Expect = 9.3 Identities = 50/60 (83%) Strand = Plus / Minus Query: 582 aagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgttcagc 641 |||||||||||||| || || || | | ||||||||| || |||||||| ||||||||| Sbjct: 272 aagtagttcctccagtaggagcgcagagacttctggccacccacatcccagatgttcagc 213
>gb|AC140060.3| Homo sapiens 12 BAC RP11-199A1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 51708 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ctacattaaacatgggagtgcaaa 177 ||||| |||||||||||||||||| Sbjct: 13708 ctacaataaacatgggagtgcaaa 13731 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ctacattaaacatgggagtgcaaa 28 ||||| |||||||||||||||||| Sbjct: 13708 ctacaataaacatgggagtgcaaa 13731 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctacattaaacatgggagtgcaaa 102 ||||| |||||||||||||||||| Sbjct: 13708 ctacaataaacatgggagtgcaaa 13731
>gb|AC009264.6|AC009264 Homo sapiens chromosome 7 clone RP11-271F4, complete sequence Length = 164824 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctacattaaacatgggagtgcaaa 102 ||||| |||||||||||||||||| Sbjct: 12022 ctacagtaaacatgggagtgcaaa 11999 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 ctacattaaacatgggagtgcaaa 28 ||||| |||||||||||||||||| Sbjct: 12022 ctacagtaaacatgggagtgcaaa 11999 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 ctacattaaacatgggagtgcaaa 177 ||||| |||||||||||||||||| Sbjct: 12022 ctacagtaaacatgggagtgcaaa 11999
>gb|AC009332.6|AC009332 Homo sapiens chromosome 7 clone RP11-348O21, complete sequence Length = 148471 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctacattaaacatgggagtgcaaa 102 ||||| |||||||||||||||||| Sbjct: 35311 ctacagtaaacatgggagtgcaaa 35288 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 ctacattaaacatgggagtgcaaa 28 ||||| |||||||||||||||||| Sbjct: 35311 ctacagtaaacatgggagtgcaaa 35288 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 ctacattaaacatgggagtgcaaa 177 ||||| |||||||||||||||||| Sbjct: 35311 ctacagtaaacatgggagtgcaaa 35288
>gb|AY816757.1| Uncultured bacterium clone LC06 small subunit ribosomal RNA gene, partial sequence Length = 453 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 658 ggatggttttgatattaaag 677 |||||||||||||||||||| Sbjct: 179 ggatggttttgatattaaag 198
>dbj|AB020642.1| Homo sapiens mRNA for KIAA0835 protein, partial cds Length = 5533 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cctggagcaggccatcgccc 338 |||||||||||||||||||| Sbjct: 1504 cctggagcaggccatcgccc 1523
>dbj|AB057449.1| Ciona intestinalis mRNA for Ci-META6, complete cds Length = 375 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 ctcttctttcaaaagattgtggag 508 ||||||||||||||||||| |||| Sbjct: 275 ctcttctttcaaaagattgaggag 252
>emb|CT573098.3| RP43-076G03, complete sequence Length = 175456 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ctacattaaacatgggagtg 24 |||||||||||||||||||| Sbjct: 131993 ctacattaaacatgggagtg 131974 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ctacattaaacatgggagtg 173 |||||||||||||||||||| Sbjct: 131993 ctacattaaacatgggagtg 131974 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctacattaaacatgggagtg 98 |||||||||||||||||||| Sbjct: 131993 ctacattaaacatgggagtg 131974
>dbj|AK113375.1| Ciona intestinalis cDNA, clone:ciad045a07, full insert sequence Length = 1543 Score = 40.1 bits (20), Expect = 9.3 Identities = 50/60 (83%) Strand = Plus / Minus Query: 578 ctcaaagtagttcctccaatacgaacggatggtcttctggcccccgacatcccatatgtt 637 |||||||||||| |||||||| ||||| | | |||||| || || |||||||| ||||| Sbjct: 279 ctcaaagtagtttctccaatatgaacgaagtgacttctgaccaccaacatcccaaatgtt 220
>emb|CT573270.1| RP43-049F09, complete sequence Length = 165723 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ctacattaaacatgggagtg 24 |||||||||||||||||||| Sbjct: 43955 ctacattaaacatgggagtg 43936 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ctacattaaacatgggagtg 173 |||||||||||||||||||| Sbjct: 43955 ctacattaaacatgggagtg 43936 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctacattaaacatgggagtg 98 |||||||||||||||||||| Sbjct: 43955 ctacattaaacatgggagtg 43936
>gb|AC113480.8| Mus musculus chromosome 13, clone RP23-309D8, complete sequence Length = 181457 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tgcaaaacaaacttgatcat 116 |||||||||||||||||||| Sbjct: 46392 tgcaaaacaaacttgatcat 46373 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 tgcaaaacaaacttgatcat 191 |||||||||||||||||||| Sbjct: 46392 tgcaaaacaaacttgatcat 46373 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,972,858 Number of Sequences: 3902068 Number of extensions: 5972858 Number of successful extensions: 129165 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 128723 Number of HSP's gapped (non-prelim): 459 length of query: 683 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 660 effective length of database: 17,143,297,704 effective search space: 11314576484640 effective search space used: 11314576484640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)