| Clone Name | rbags14d17 |
|---|---|
| Clone Library Name | barley_pub |
>PDZK8_HUMAN (Q8NEN9) PDZ domain-containing protein 8 (Sarcoma antigen| NY-SAR-84/NY-SAR-104) Length = 1154 Score = 32.7 bits (73), Expect = 0.80 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -2 Query: 415 GITLCKEAFQDTQFSSPEHLIFGEKKIWKR 326 G+T K +FQDTQF +P + +KK+W + Sbjct: 835 GLTENKHSFQDTQFQNPTWCDYCKKKVWTK 864
>ANXA4_PIG (P08132) Annexin A4 (Annexin IV) (Lipocortin IV) (Endonexin I)| (Chromobindin-4) (Protein II) (P32.5) (Placental anticoagulant protein I) (PAP-II) (PP4-X) (35-beta calcimedin) Length = 318 Score = 31.2 bits (69), Expect = 2.3 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -3 Query: 507 DLREVTQGGKSKFGSDSKTLLRVLCHRNDSEASHYVKKHFKI 382 D +++ + G+ K+G+D L VLC RN + H ++ +I Sbjct: 173 DAQDLYEAGEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRI 214
>ANXA4_HUMAN (P09525) Annexin A4 (Annexin IV) (Lipocortin IV) (Endonexin I)| (Chromobindin-4) (Protein II) (P32.5) (Placental anticoagulant protein II) (PAP-II) (PP4-X) (35-beta calcimedin) (Carbohydrate-binding protein P33/P41) (P33/41) Length = 318 Score = 31.2 bits (69), Expect = 2.3 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -3 Query: 507 DLREVTQGGKSKFGSDSKTLLRVLCHRNDSEASHYVKKHFKI 382 D +++ + G+ K+G+D L VLC RN + H ++ +I Sbjct: 173 DAQDLYEAGEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRI 214
>ANXA4_CANFA (P50994) Annexin A4 (Annexin IV) (Lipocortin IV) (36 kDa zymogen| granule membrane-associated protein) (ZAP36) Length = 318 Score = 31.2 bits (69), Expect = 2.3 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -3 Query: 507 DLREVTQGGKSKFGSDSKTLLRVLCHRNDSEASHYVKKHFKI 382 D +++ + G+ K+G+D L VLC RN + H ++ +I Sbjct: 173 DAQDLYEAGEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRI 214
>ANXA4_BOVIN (P13214) Annexin A4 (Annexin IV) (Lipocortin IV) (Endonexin I)| (Chromobindin-4) (Protein II) (P32.5) (Placental anticoagulant protein II) (PAP-II) (PP4-X) (35-beta calcimedin) (Carbohydrate-binding protein P33/P41) (P33/41) Length = 318 Score = 31.2 bits (69), Expect = 2.3 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -3 Query: 507 DLREVTQGGKSKFGSDSKTLLRVLCHRNDSEASHYVKKHFKI 382 D +++ + G+ K+G+D L VLC RN + H ++ +I Sbjct: 173 DAQDLYEAGEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRI 214
>ANXA4_MOUSE (P97429) Annexin A4 (Annexin IV)| Length = 318 Score = 30.8 bits (68), Expect = 3.0 Identities = 12/42 (28%), Positives = 24/42 (57%) Frame = -3 Query: 507 DLREVTQGGKSKFGSDSKTLLRVLCHRNDSEASHYVKKHFKI 382 D +E+ + G+ ++G+D L +LC RN + H ++ +I Sbjct: 173 DAQELYEAGEKRWGTDEVKFLSILCSRNRNHLLHVFDEYKRI 214
>Y1238_CLOTE (Q895N4) UPF0348 protein CTC_01238| Length = 403 Score = 30.4 bits (67), Expect = 4.0 Identities = 26/91 (28%), Positives = 45/91 (49%) Frame = -3 Query: 576 ENLVSRVRPVINLIKQETRVLIDDLREVTQGGKSKFGSDSKTLLRVLCHRNDSEASHYVK 397 E+L + + I+ + LI+ +R+ GK+ F ++ VLC N+ A Y K Sbjct: 127 EDLKNFIDKGISFPNAREKALINFMRK----GKNSFDFNN-----VLCLSNNILALEYCK 177 Query: 396 KHFKIPSSAPPST*FSGKRKSGNASKVHIMD 304 FKI S+ P F+ KR+ + + +H+ D Sbjct: 178 NLFKINSNIKP---FTVKRQGSHYNCLHLRD 205
>YRB30_YEAST (P53107) Ran-specific GTPase-activating protein 30 (Ran-binding| protein 30) (RANBP30) Length = 440 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/47 (27%), Positives = 27/47 (57%) Frame = +1 Query: 445 QQGFGVASEFAFASLSNFAQIINKHTGLLLDQIYYRTNTRDQILNSS 585 + G +AS +A +++NF I K +DQ+ ++ +R I++S+ Sbjct: 18 KSGISIASTYALKTITNFVVQIPKDDARRIDQLKFKLESRMAIVSSA 64
>ANXA4_RAT (P55260) Annexin A4 (Annexin IV) (Lipocortin IV) (36 kDa zymogen| granule membrane-associated protein) (ZAP36) Length = 318 Score = 29.6 bits (65), Expect = 6.7 Identities = 11/42 (26%), Positives = 24/42 (57%) Frame = -3 Query: 507 DLREVTQGGKSKFGSDSKTLLRVLCHRNDSEASHYVKKHFKI 382 D +++ + G+ ++G+D L +LC RN + H ++ +I Sbjct: 173 DAQDLYEAGEKRWGTDEVKFLSILCSRNRNHLLHVFDEYKRI 214
>OFD1_HUMAN (O75665) Oral-facial-digital syndrome 1 protein (Protein 71-7A)| Length = 1012 Score = 29.3 bits (64), Expect = 8.8 Identities = 17/45 (37%), Positives = 27/45 (60%) Frame = -2 Query: 469 RKRLQNPAEGPVPQK*FRGITLCKEAFQDTQFSSPEHLIFGEKKI 335 R+ ++N A+ P+ K + L EAF++ SSPE IFGE ++ Sbjct: 654 RRVIKNSAKSPLAAKSPPSLHLL-EAFKNITSSSPERHIFGEDRV 697
>ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens 1 protein)| (Zona occludens 1 protein) (Tight junction protein 1) Length = 1745 Score = 29.3 bits (64), Expect = 8.8 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +3 Query: 3 QMTAKRYIGHTHKKPPYRIVSISSETTTDQHSHQTEMPSKSS 128 Q A + G +H +PP R S S + ++ H T+ P + S Sbjct: 293 QSLASDHSGRSHDRPPRRSQSRSPDQRSEPSDHSTQSPQQPS 334 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,521,459 Number of Sequences: 219361 Number of extensions: 1870409 Number of successful extensions: 5375 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 5246 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5375 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)