ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14d16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U89510.1|HVU89510 Hordeum vulgare b-keto acyl reductase (glos... 688 0.0
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 260 5e-66
3dbj|AP005384.2| Oryza sativa (japonica cultivar-group) genomic D... 260 5e-66
4ref|XM_466551.1| Oryza sativa (japonica cultivar-group), mRNA 248 2e-62
5gb|BT019228.1| Zea mays clone Contig901.F mRNA sequence 226 8e-56
6gb|AF302098.1| Zea mays beta-ketoacyl reductase (gl8) gene, gl8-... 226 8e-56
7gb|U89509.2|ZMU89509 Zea mays b-keto acyl reductase (glossy8) mR... 226 8e-56
8gb|AF527771.1| Zea mays cultivar B73 beta-ketoacyl reductase GL8... 212 1e-51
9gb|AC123572.15| Medicago truncatula clone mth2-2b2, complete seq... 70 1e-08
10emb|CT030174.3| M.truncatula DNA sequence from clone MTH2-71J12 ... 70 1e-08
11gb|DQ306756.1| Hevea brasiliensis isolate SSH27 mRNA sequence 62 3e-06
12gb|U89511.1|APU89511 Allium porrum b-keto acyl reductase (glossy... 56 2e-04
13gb|BT013954.1| Lycopersicon esculentum clone 132977F, mRNA sequence 48 0.039
14ref|NM_203002.1| Arabidopsis thaliana transaminase/ transferase,... 44 0.60
15ref|NM_120544.2| Arabidopsis thaliana transaminase/ transferase,... 44 0.60
16ref|XM_472929.1| Oryza sativa (japonica cultivar-group), predic... 44 0.60
17emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4,... 44 0.60
18emb|AL162875.1|ATT32M21 Arabidopsis thaliana DNA chromosome 5, B... 44 0.60
19emb|AL162972.1|ATT1E3 Arabidopsis thaliana DNA chromosome 5, BAC... 44 0.60
20dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
21dbj|AK119095.1| Arabidopsis thaliana At5g04620 mRNA for putative... 44 0.60
22dbj|AK060512.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.60
23gb|DQ017966.1| Arabidopsis thaliana 7-keto-8-amino pelargonic ac... 44 0.60
24emb|CR855307.18| Zebrafish DNA sequence from clone DKEYP-121D2 i... 42 2.4
25gb|AC163737.3| Pan troglodytes BAC clone CH251-547O12 from chrom... 40 9.4
26gb|AC138618.5| Mus musculus BAC clone RP23-335D4 from chromosome... 40 9.4
27gb|AC126940.4| Mus musculus BAC clone RP23-77E4 from chromosome ... 40 9.4
28gb|AC121904.2| Mus musculus BAC clone RP24-175O7 from 7, complet... 40 9.4
29emb|AL365205.35| Human DNA sequence from clone RP11-298J23 on ch... 40 9.4
30dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 40 9.4
31gb|AC097634.2| Homo sapiens chromosome 3 clone RP11-154H23, comp... 40 9.4
32gb|AF423072.1|AF423072 Homo sapiens signal transducer and activa... 40 9.4
33dbj|AK032736.1| Mus musculus 12 days embryo male wolffian duct i... 40 9.4
34emb|BX830281.1|CNS09ZYS Arabidopsis thaliana Full-length cDNA Co... 40 9.4
35gb|AC067945.4| Homo sapiens BAC clone RP11-629B4 from 2, complet... 40 9.4
36emb|BX294168.12| Mouse DNA sequence from clone RP23-29M4 on chro... 40 9.4
37emb|BX511010.5| Zebrafish DNA sequence from clone CH211-79L20 in... 40 9.4
38gb|AC002315.1|AC002315 Mouse BAC-146N21 Chromosome X contains id... 40 9.4
39emb|BX897734.11| Zebrafish DNA sequence from clone CH211-194J14,... 40 9.4
40emb|AL161983.1|HSM802586 Homo sapiens mRNA; cDNA DKFZp761K2024 (... 40 9.4
41emb|AL132827.2|CNS01DTP Human chromosome 14 DNA sequence BAC C-2... 40 9.4 
>gb|U89510.1|HVU89510 Hordeum vulgare b-keto acyl reductase (glossy8) mRNA, complete cds
          Length = 1138

 Score =  688 bits (347), Expect = 0.0
 Identities = 347/347 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    atgatgttgaaatgccgacaacagagctacaaatactgattcgttacacatgacgaacaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 atgatgttgaaatgccgacaacagagctacaaatactgattcgttacacatgacgaacaa 1063

                                                                        
Query: 61   acatggcagatctcaacaatgaatcatcactgcgctttcttcttggcatccttagcctgc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 acatggcagatctcaacaatgaatcatcactgcgctttcttcttggcatccttagcctgc 1003

                                                                        
Query: 121  cccttcttgcggattttgatgcacatgctgaggcgcgtactgtccaccagcgactctggg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 cccttcttgcggattttgatgcacatgctgaggcgcgtactgtccaccagcgactctggg 943

                                                                        
Query: 181  agaagggagatcaagaaccacagaacagagtgtggccagtacggtgtgcacctcggctca 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942  agaagggagatcaagaaccacagaacagagtgtggccagtacggtgtgcacctcggctca 883

                                                                        
Query: 241  tagccaatgtggcgaatagcagcacgagcataggtgtccgcggatggcacaaggaaggaa 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882  tagccaatgtggcgaatagcagcacgagcataggtgtccgcggatggcacaaggaaggaa 823

                                                           
Query: 301  gacctcctgattgatgccatctttgttgccacgtacaagggcacctg 347
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822  gacctcctgattgatgccatctttgttgccacgtacaagggcacctg 776
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  260 bits (131), Expect = 5e-66
 Identities = 242/279 (86%)
 Strand = Plus / Plus

                                                                            
Query: 80       tgaatcatcactgcgctttcttcttggcatccttagcctgccccttcttgcggattttga 139
                |||| |||||||||||||||||||| ||||| || || ||||||||||||||||| ||||
Sbjct: 23261266 tgaagcatcactgcgctttcttcttagcatctttggcttgccccttcttgcggatcttga 23261325

                                                                            
Query: 140      tgcacatgctgaggcgcgtactgtccaccagcgactctgggagaagggagatcaagaacc 199
                ||||||| |  |||||  | ||||| |  || ||||| ||||||| |||||||| |||||
Sbjct: 23261326 tgcacattcccaggcgaatgctgtcaatgagtgactcggggagaatggagatcaggaacc 23261385

                                                                            
Query: 200      acagaacagagtgtggccagtacggtgtgcacctcggctcatagccaatgtggcgaatag 259
                |||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
Sbjct: 23261386 acattacagagtgtggccagtacggtgtgcacctcggctcatagcctatgtgacgaatgg 23261445

                                                                            
Query: 260      cagcacgagcataggtgtccgcggatggcacaaggaaggaagacctcctgattgatgcca 319
                ||||||| || ||||||||||||||||| |||| ||| || ||  ||||||| || ||||
Sbjct: 23261446 cagcacgggcgtaggtgtccgcggatgggacaaagaacgaggatttcctgatagaggcca 23261505

                                                       
Query: 320      tctttgttgccacgtacaagggcacctgaatatatcaca 358
                ||||||||||||| |||||||||||||||| | ||||||
Sbjct: 23261506 tctttgttgccacatacaagggcacctgaacagatcaca 23261544
to top
>dbj|AP005384.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_D02
          Length = 112773

 Score =  260 bits (131), Expect = 5e-66
 Identities = 242/279 (86%)
 Strand = Plus / Plus

                                                                         
Query: 80    tgaatcatcactgcgctttcttcttggcatccttagcctgccccttcttgcggattttga 139
             |||| |||||||||||||||||||| ||||| || || ||||||||||||||||| ||||
Sbjct: 20412 tgaagcatcactgcgctttcttcttagcatctttggcttgccccttcttgcggatcttga 20471

                                                                         
Query: 140   tgcacatgctgaggcgcgtactgtccaccagcgactctgggagaagggagatcaagaacc 199
             ||||||| |  |||||  | ||||| |  || ||||| ||||||| |||||||| |||||
Sbjct: 20472 tgcacattcccaggcgaatgctgtcaatgagtgactcggggagaatggagatcaggaacc 20531

                                                                         
Query: 200   acagaacagagtgtggccagtacggtgtgcacctcggctcatagccaatgtggcgaatag 259
             |||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
Sbjct: 20532 acattacagagtgtggccagtacggtgtgcacctcggctcatagcctatgtgacgaatgg 20591

                                                                         
Query: 260   cagcacgagcataggtgtccgcggatggcacaaggaaggaagacctcctgattgatgcca 319
             ||||||| || ||||||||||||||||| |||| ||| || ||  ||||||| || ||||
Sbjct: 20592 cagcacgggcgtaggtgtccgcggatgggacaaagaacgaggatttcctgatagaggcca 20651

                                                    
Query: 320   tctttgttgccacgtacaagggcacctgaatatatcaca 358
             ||||||||||||| |||||||||||||||| | ||||||
Sbjct: 20652 tctttgttgccacatacaagggcacctgaacagatcaca 20690
to top
>ref|XM_466551.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 765

 Score =  248 bits (125), Expect = 2e-62
 Identities = 227/261 (86%)
 Strand = Plus / Minus

                                                                       
Query: 87  tcactgcgctttcttcttggcatccttagcctgccccttcttgcggattttgatgcacat 146
           |||||||||||||||||| ||||| || || ||||||||||||||||| |||||||||||
Sbjct: 765 tcactgcgctttcttcttagcatctttggcttgccccttcttgcggatcttgatgcacat 706

                                                                       
Query: 147 gctgaggcgcgtactgtccaccagcgactctgggagaagggagatcaagaaccacagaac 206
            |  |||||  | ||||| |  || ||||| ||||||| |||||||| ||||||||  ||
Sbjct: 705 tcccaggcgaatgctgtcaatgagtgactcggggagaatggagatcaggaaccacattac 646

                                                                       
Query: 207 agagtgtggccagtacggtgtgcacctcggctcatagccaatgtggcgaatagcagcacg 266
           ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 645 agagtgtggccagtacggtgtgcacctcggctcatagcctatgtgacgaatggcagcacg 586

                                                                       
Query: 267 agcataggtgtccgcggatggcacaaggaaggaagacctcctgattgatgccatctttgt 326
            || ||||||||||||||||| |||| ||| || ||  ||||||| || |||||||||||
Sbjct: 585 ggcgtaggtgtccgcggatgggacaaagaacgaggatttcctgatagaggccatctttgt 526

                                
Query: 327 tgccacgtacaagggcacctg 347
           |||||| ||||||||||||||
Sbjct: 525 tgccacatacaagggcacctg 505
to top
>gb|BT019228.1| Zea mays clone Contig901.F mRNA sequence
          Length = 947

 Score =  226 bits (114), Expect = 8e-56
 Identities = 225/262 (85%)
 Strand = Plus / Plus

                                                                       
Query: 86  atcactgcgctttcttcttggcatccttagcctgccccttcttgcggattttgatgcaca 145
           ||||| |||| ||||||||||| ||||| ||| |||||||||||||||| || |||||||
Sbjct: 250 atcacagcgccttcttcttggcgtccttggccagccccttcttgcggatcttaatgcaca 309

                                                                       
Query: 146 tgctgaggcgcgtactgtccaccagcgactctgggagaagggagatcaagaaccacagaa 205
           |||  ||||||   ||||| |  || ||||| || |||| |||||||||||||||||  |
Sbjct: 310 tgcccaggcgcacgctgtcgataagggactcgggaagaatggagatcaagaaccacacga 369

                                                                       
Query: 206 cagagtgtggccagtacggtgtgcacctcggctcatagccaatgtggcgaatagcagcac 265
           |||||||||||||||| ||||||||||| ||||| || |||||||| ||||  |||||||
Sbjct: 370 cagagtgtggccagtatggtgtgcacctaggctcgtatccaatgtgacgaacggcagcac 429

                                                                       
Query: 266 gagcataggtgtccgcggatggcacaaggaaggaagacctcctgattgatgccatctttg 325
           ||||||||||||| || ||||| || | |||||||||| ||||||| |||||||||||||
Sbjct: 430 gagcataggtgtcagcagatgggaccatgaaggaagacttcctgatggatgccatctttg 489

                                 
Query: 326 ttgccacgtacaagggcacctg 347
           | |||||||| |||||||||||
Sbjct: 490 tcgccacgtataagggcacctg 511
to top
>gb|AF302098.1| Zea mays beta-ketoacyl reductase (gl8) gene, gl8-B73 allele, complete
            cds
          Length = 6817

 Score =  226 bits (114), Expect = 8e-56
 Identities = 225/262 (85%)
 Strand = Plus / Minus

                                                                        
Query: 86   atcactgcgctttcttcttggcatccttagcctgccccttcttgcggattttgatgcaca 145
            ||||| |||| ||||||||||| ||||| ||| |||||||||||||||| || |||||||
Sbjct: 5395 atcacagcgccttcttcttggcgtccttggccagccccttcttgcggatcttaatgcaca 5336

                                                                        
Query: 146  tgctgaggcgcgtactgtccaccagcgactctgggagaagggagatcaagaaccacagaa 205
            |||  ||||||   ||||| |  || ||||| || |||| |||||||||||||||||  |
Sbjct: 5335 tgcccaggcgcacgctgtcgataagggactcgggaagaatggagatcaagaaccacacga 5276

                                                                        
Query: 206  cagagtgtggccagtacggtgtgcacctcggctcatagccaatgtggcgaatagcagcac 265
            |||||||||||||||| ||||||||||| ||||| || |||||||| ||||  |||||||
Sbjct: 5275 cagagtgtggccagtatggtgtgcacctaggctcgtatccaatgtgacgaacggcagcac 5216

                                                                        
Query: 266  gagcataggtgtccgcggatggcacaaggaaggaagacctcctgattgatgccatctttg 325
            ||||||||||||| || ||||| || | |||||||||| ||||||| |||||||||||||
Sbjct: 5215 gagcataggtgtcagcagatgggaccatgaaggaagacttcctgatggatgccatctttg 5156

                                  
Query: 326  ttgccacgtacaagggcacctg 347
            | |||||||| |||||||||||
Sbjct: 5155 tcgccacgtataagggcacctg 5134
to top
>gb|U89509.2|ZMU89509 Zea mays b-keto acyl reductase (glossy8) mRNA, complete cds
          Length = 1374

 Score =  226 bits (114), Expect = 8e-56
 Identities = 225/262 (85%)
 Strand = Plus / Minus

                                                                        
Query: 86   atcactgcgctttcttcttggcatccttagcctgccccttcttgcggattttgatgcaca 145
            ||||| |||| ||||||||||| ||||| ||| |||||||||||||||| || |||||||
Sbjct: 1110 atcacagcgccttcttcttggcgtccttggccagccccttcttgcggatcttaatgcaca 1051

                                                                        
Query: 146  tgctgaggcgcgtactgtccaccagcgactctgggagaagggagatcaagaaccacagaa 205
            |||  ||||||   ||||| |  || ||||| || |||| |||||||||||||||||  |
Sbjct: 1050 tgcccaggcgcacgctgtcgataagggactcgggaagaatggagatcaagaaccacacga 991

                                                                        
Query: 206  cagagtgtggccagtacggtgtgcacctcggctcatagccaatgtggcgaatagcagcac 265
            |||||||||||||||| ||||||||||| ||||| || |||||||| ||||  |||||||
Sbjct: 990  cagagtgtggccagtatggtgtgcacctaggctcgtatccaatgtgacgaacggcagcac 931

                                                                        
Query: 266  gagcataggtgtccgcggatggcacaaggaaggaagacctcctgattgatgccatctttg 325
            ||||||||||||| || ||||| || | |||||||||| ||||||| |||||||||||||
Sbjct: 930  gagcataggtgtcagcagatgggaccatgaaggaagacttcctgatggatgccatctttg 871

                                  
Query: 326  ttgccacgtacaagggcacctg 347
            | |||||||| |||||||||||
Sbjct: 870  tcgccacgtataagggcacctg 849
to top
>gb|AF527771.1| Zea mays cultivar B73 beta-ketoacyl reductase GL8B (gl8b) gene,
            complete cds
          Length = 7724

 Score =  212 bits (107), Expect = 1e-51
 Identities = 218/255 (85%)
 Strand = Plus / Minus

                                                                        
Query: 97   ttcttcttggcatccttagcctgccccttcttgcggattttgatgcacatgctgaggcgc 156
            ||||||||||| ||||| ||| |||||||||||||||| || ||||||||||  ||||||
Sbjct: 5926 ttcttcttggcgtccttggccagccccttcttgcggatcttaatgcacatgcccaggcgc 5867

                                                                        
Query: 157  gtactgtccaccagcgactctgggagaagggagatcaagaaccacagaacagagtgtggc 216
               ||||| |  || ||||| || ||||  ||||||||||||||||  ||||||||||||
Sbjct: 5866 acgctgtctataagggactcaggaagaatcgagatcaagaaccacacgacagagtgtggc 5807

                                                                        
Query: 217  cagtacggtgtgcacctcggctcatagccaatgtggcgaatagcagcacgagcataggtg 276
            ||||||||||||||||| ||||| || |||||||| ||||  ||||||||||||||||||
Sbjct: 5806 cagtacggtgtgcacctaggctcgtatccaatgtgacgaacggcagcacgagcataggtg 5747

                                                                        
Query: 277  tccgcggatggcacaaggaaggaagacctcctgattgatgccatctttgttgccacgtac 336
            || |  ||||| || | |||||||||| ||||||| |||||||||||||| |||||||| 
Sbjct: 5746 tcagtagatggaaccatgaaggaagacttcctgatagatgccatctttgtcgccacgtat 5687

                           
Query: 337  aagggcacctgaata 351
            | |||||||||||||
Sbjct: 5686 aggggcacctgaata 5672
to top
>gb|AC123572.15| Medicago truncatula clone mth2-2b2, complete sequence
          Length = 119925

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                         
Query: 283   gatggcacaaggaaggaagacctcctgattgatgccatctttgttgccacgtacaagggc 342
             ||||| |||| ||| ||||| ||||||||||||||||||||||||||||| || || || 
Sbjct: 94578 gatggaacaaagaatgaagatctcctgattgatgccatctttgttgccacatataatgga 94519

                    
Query: 343   acctgaa 349
             |||||||
Sbjct: 94518 acctgaa 94512
to top
>emb|CT030174.3| M.truncatula DNA sequence from clone MTH2-71J12 on chromosome 3,
             complete sequence
          Length = 133240

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                         
Query: 283   gatggcacaaggaaggaagacctcctgattgatgccatctttgttgccacgtacaagggc 342
             ||||| |||| ||| ||||| ||||||||||||||||||||||||||||| || || || 
Sbjct: 17744 gatggaacaaagaatgaagatctcctgattgatgccatctttgttgccacatataatgga 17685

                    
Query: 343   acctgaa 349
             |||||||
Sbjct: 17684 acctgaa 17678
to top
>gb|DQ306756.1| Hevea brasiliensis isolate SSH27 mRNA sequence
          Length = 763

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 294 gaaggaagacctcctgattgatgccatctttgttgccac 332
           ||||||||| ||||| |||||||||||||||||||||||
Sbjct: 168 gaaggaagatctcctaattgatgccatctttgttgccac 130
to top
>gb|U89511.1|APU89511 Allium porrum b-keto acyl reductase (glossy8) mRNA, partial cds
          Length = 872

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 206 cagagtgtggccagtacggtgtgcacctcggctcatagcc 245
           ||||||||||||||||||| ||||| || |||||||||||
Sbjct: 573 cagagtgtggccagtacggagtgcatctaggctcatagcc 534
to top
>gb|BT013954.1| Lycopersicon esculentum clone 132977F, mRNA sequence
          Length = 1241

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 198 ccacagaacagagtgtggccagtacggtgtgcacctcggctcat 241
           |||||||| ||| || |||||||| ||||||||||| |||||||
Sbjct: 864 ccacagaagagaatggggccagtaaggtgtgcaccttggctcat 821
to top
>ref|NM_203002.1| Arabidopsis thaliana transaminase/ transferase, transferring
            nitrogenous groups AT5G04620 transcript variant
            AT5G04620.2 mRNA, complete cds
          Length = 1564

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 84   tcatcactgcgctttcttcttg 105
            ||||||||||||||||||||||
Sbjct: 1392 tcatcactgcgctttcttcttg 1413
to top
>ref|NM_120544.2| Arabidopsis thaliana transaminase/ transferase, transferring
            nitrogenous groups AT5G04620 transcript variant
            AT5G04620.1 mRNA, complete cds
          Length = 1934

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 84   tcatcactgcgctttcttcttg 105
            ||||||||||||||||||||||
Sbjct: 1762 tcatcactgcgctttcttcttg 1783
to top
>ref|XM_472929.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 957

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 186 ggagatcaagaaccacagaacagagtgtggccagtacggtgtgcacctcggctc 239
           |||||| | ||||||||| || | ||| |||||||| || ||||||||||||||
Sbjct: 858 ggagatgaggaaccacagcaccgcgtgcggccagtagggcgtgcacctcggctc 805
to top
>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15,
             complete sequence
          Length = 150864

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 186   ggagatcaagaaccacagaacagagtgtggccagtacggtgtgcacctcggctc 239
             |||||| | ||||||||| || | ||| |||||||| || ||||||||||||||
Sbjct: 40459 ggagatgaggaaccacagcaccgcgtgcggccagtagggcgtgcacctcggctc 40512
to top
>emb|AL162875.1|ATT32M21 Arabidopsis thaliana DNA chromosome 5, BAC clone T32M21 (ESSA project)
          Length = 93045

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 84    tcatcactgcgctttcttcttg 105
             ||||||||||||||||||||||
Sbjct: 86551 tcatcactgcgctttcttcttg 86572
to top
>emb|AL162972.1|ATT1E3 Arabidopsis thaliana DNA chromosome 5, BAC clone T1E3 (ESSA project)
          Length = 83485

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 84    tcatcactgcgctttcttcttg 105
             ||||||||||||||||||||||
Sbjct: 19768 tcatcactgcgctttcttcttg 19789
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                      
Query: 186      ggagatcaagaaccacagaacagagtgtggccagtacggtgtgcacctcggctc 239
                |||||| | ||||||||| || | ||| |||||||| || ||||||||||||||
Sbjct: 24151234 ggagatgaggaaccacagcaccgcgtgcggccagtagggcgtgcacctcggctc 24151287
to top
>dbj|AK119095.1| Arabidopsis thaliana At5g04620 mRNA for putative
            8-amino-7-oxononanoate synthase, complete cds, clone:
            RAFL21-44-N03
          Length = 1898

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 84   tcatcactgcgctttcttcttg 105
            ||||||||||||||||||||||
Sbjct: 1762 tcatcactgcgctttcttcttg 1783
to top
>dbj|AK060512.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-E03, full
           insert sequence
          Length = 1299

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 186 ggagatcaagaaccacagaacagagtgtggccagtacggtgtgcacctcggctc 239
           |||||| | ||||||||| || | ||| |||||||| || ||||||||||||||
Sbjct: 951 ggagatgaggaaccacagcaccgcgtgcggccagtagggcgtgcacctcggctc 898
to top
>gb|DQ017966.1| Arabidopsis thaliana 7-keto-8-amino pelargonic acid synthase mRNA,
            complete cds
          Length = 1468

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 84   tcatcactgcgctttcttcttg 105
            ||||||||||||||||||||||
Sbjct: 1370 tcatcactgcgctttcttcttg 1391
to top
>emb|CR855307.18| Zebrafish DNA sequence from clone DKEYP-121D2 in linkage group 14,
              complete sequence
          Length = 167962

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 664    acatgcttcattagttcagtt 684
              |||||||||||||||||||||
Sbjct: 100855 acatgcttcattagttcagtt 100875
to top
>gb|AC163737.3| Pan troglodytes BAC clone CH251-547O12 from chromosome 6, complete
              sequence
          Length = 207116

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 645    catgatataagatagaaata 664
              ||||||||||||||||||||
Sbjct: 177934 catgatataagatagaaata 177953
to top
>gb|AC138618.5| Mus musculus BAC clone RP23-335D4 from chromosome 7, complete sequence
          Length = 189419

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   tttgatgcacatgctgaggc 154
             ||||||||||||||||||||
Sbjct: 45743 tttgatgcacatgctgaggc 45762
to top
>gb|AC126940.4| Mus musculus BAC clone RP23-77E4 from chromosome 19, complete sequence
          Length = 256476

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 471   atcctccaaggaactacaaa 490
             ||||||||||||||||||||
Sbjct: 77111 atcctccaaggaactacaaa 77092
to top
>gb|AC121904.2| Mus musculus BAC clone RP24-175O7 from 7, complete sequence
          Length = 162770

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    tttgatgcacatgctgaggc 154
              ||||||||||||||||||||
Sbjct: 138327 tttgatgcacatgctgaggc 138346
to top
>emb|AL365205.35| Human DNA sequence from clone RP11-298J23 on chromosome 6 Contains the
             5' end of the TFEB gene for transcription factor EB, the
             PGC gene for progastricsin, the FRS3 gene for fibroblast
             growth factor receptor substrate 3, the C6orf49 gene for
             chromosome 6 open reading frame 49, the 3' end of the
             USP49 gene for ubiquitin specific protease 49, the 3' end
             of a novel gene and 5 CpG islands, complete sequence
          Length = 106711

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 645   catgatataagatagaaata 664
             ||||||||||||||||||||
Sbjct: 77644 catgatataagatagaaata 77663
to top
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 456    ggtagactttcaaggatcctccaa 479
              ||||||||| ||||||||||||||
Sbjct: 206371 ggtagacttgcaaggatcctccaa 206348
to top
>gb|AC097634.2| Homo sapiens chromosome 3 clone RP11-154H23, complete sequence
          Length = 193553

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 430    caaaactgttcaaatgacta 449
              ||||||||||||||||||||
Sbjct: 188708 caaaactgttcaaatgacta 188689
to top
>gb|AF423072.1|AF423072 Homo sapiens signal transducer and activator of transcription 4
            (STAT4) gene, partial cds
          Length = 52796

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  gaacagagtgtggccagtac 222
            ||||||||||||||||||||
Sbjct: 3380 gaacagagtgtggccagtac 3361
to top
>dbj|AK032736.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
            region cDNA, RIKEN full-length enriched library,
            clone:6720422L05 product:proprotein convertase
            subtilisin/kexin type 5, full insert sequence
          Length = 2537

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 471  atcctccaaggaactacaaa 490
            ||||||||||||||||||||
Sbjct: 1429 atcctccaaggaactacaaa 1410
to top
>emb|BX830281.1|CNS09ZYS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB70ZC06 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1538

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   atcactgcgctttcttcttg 105
            ||||||||||||||||||||
Sbjct: 1395 atcactgcgctttcttcttg 1414
to top
>gb|AC067945.4| Homo sapiens BAC clone RP11-629B4 from 2, complete sequence
          Length = 162471

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    gaacagagtgtggccagtac 222
              ||||||||||||||||||||
Sbjct: 151755 gaacagagtgtggccagtac 151774
to top
>emb|BX294168.12| Mouse DNA sequence from clone RP23-29M4 on chromosome X, complete
              sequence
          Length = 225924

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 398    tgagaacaatatcctgaaaacagt 421
              ||||||||||||| ||||||||||
Sbjct: 153833 tgagaacaatatcatgaaaacagt 153856
to top
>emb|BX511010.5| Zebrafish DNA sequence from clone CH211-79L20 in linkage group 16,
             complete sequence
          Length = 156317

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 510   tcatcatgatactgatattt 529
             ||||||||||||||||||||
Sbjct: 38202 tcatcatgatactgatattt 38183
to top
>gb|AC002315.1|AC002315 Mouse BAC-146N21 Chromosome X contains iduronate-2-sulfatase gene;
             complete sequence
          Length = 110079

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 398   tgagaacaatatcctgaaaacagt 421
             ||||||||||||| ||||||||||
Sbjct: 73002 tgagaacaatatcatgaaaacagt 72979
to top
>emb|BX897734.11| Zebrafish DNA sequence from clone CH211-194J14, complete sequence
          Length = 151729

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 671    tcattagttcagttgaagat 690
              ||||||||||||||||||||
Sbjct: 122580 tcattagttcagttgaagat 122561
to top
>emb|AL161983.1|HSM802586 Homo sapiens mRNA; cDNA DKFZp761K2024 (from clone DKFZp761K2024)
          Length = 4542

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  caaaactgttcaaatgacta 449
            ||||||||||||||||||||
Sbjct: 3987 caaaactgttcaaatgacta 4006
to top
>emb|AL132827.2|CNS01DTP Human chromosome 14 DNA sequence BAC C-2149C7 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 138016

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 370    aagaggtcagcaatttgtat 389
              ||||||||||||||||||||
Sbjct: 105311 aagaggtcagcaatttgtat 105292


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,615,062
Number of Sequences: 3902068
Number of extensions: 6615062
Number of successful extensions: 116571
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116408
Number of HSP's gapped (non-prelim): 156
length of query: 690
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 667
effective length of database: 17,143,297,704
effective search space: 11434579568568
effective search space used: 11434579568568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top