>gb|U76261.1|HVU76261 Hordeum vulgare highly repeated, retrotransposon-like sequence
          Length = 5050

 Score =  567 bits (286), Expect = e-158
 Identities = 347/367 (94%), Gaps = 4/367 (1%)
 Strand = Plus / Minus

                                                                       
Query: 307 cctatcatatgaactgcattgtaaaatcattgcattcagcattcgtaggtgcaccatatt 366
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 947 cctatcatatgaactgcattgtaaaatcattgcattcaacattcgtaggtgcaccatatt 888

                                                                       
Query: 367 cagaggacgcgctcaccgaagggtatattttagttgaaacagactagctctgcttgatag 426
           | |||||| | |||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 887 cggaggacacactcaccgaagggtagatttgagttgaaacagactagctctgcttgatag 828

                                                                       
Query: 427 tgcgctacacaatacaaggc----gctcagcctgttgttccattgattagcaaggctgag 482
           || ||||||||||||||| |    ||||||||||||| ||||||||||||||||||||||
Sbjct: 827 tgtgctacacaatacaagactcaggctcagcctgttgctccattgattagcaaggctgag 768

                                                                       
Query: 483 gatggaaggcatcagcaaagcagccagcaaaataaccacaagatccatgcagatcattgg 542
           |||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||
Sbjct: 767 gatggaaggcatcagcaaagcagccgacaaaataaccacaagatccatgcagatcgttgg 708

                                                                       
Query: 543 caaagcaaatcttaaagaagaaatagctaacagcaataagactaggcatattagtatcaa 602
           ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 707 caaagcaaatcttaaagaagaaatagctagcagcaataagactaggcatattagtaccaa 648

                                                                       
Query: 603 ccgggcaatccaaaatgcaccaaactagcagctacaaggcaataagactaggcatattag 662
           ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 647 ccgggcaatccaaaatgcaccaaaccagcagctacaaggaaataagactaggcatattag 588

                  
Query: 663 tgtcaac 669
           |||||||
Sbjct: 587 tgtcaac 581



 Score =  280 bits (141), Expect = 6e-72
 Identities = 149/152 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    atagaagattngtctccgaatacaattcatcatattagtctccgaatttaaaataccgaa 60
            |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2089 atagaagattagtctccgaatacaattcatcatattagtctctgaatttaaaataccgaa 2030

                                                                        
Query: 61   caaagttagaacattacatgtctcgagaccgcgagtagcgagtttgtcttcacattacaa 120
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2029 caaagttagaacattacaagtctcgagaccgcgagtagcgagtttgtcttcacattacaa 1970

                                            
Query: 121  gtcgatatcgatcatctaaactaccatcacat 152
            ||||||||||||||||||||||||||||||||
Sbjct: 1969 gtcgatatcgatcatctaaactaccatcacat 1938



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  tcacattacaagtcgatatc 129
            ||||||||||||||||||||
Sbjct: 1943 tcacattacaagtcgatatc 1924

>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score =  371 bits (187), Expect = 2e-99
 Identities = 219/230 (95%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagaagattngtctccgaatacaattcatcatattagtctccgaatttaaaataccgaa 60
              |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323494 atagaagattagtctccgaatacaattcatcatattagtctccgaatttaaaataccgaa 323435

                                                                          
Query: 61     caaagttagaacattacatgtctcgagaccgcgagtagcgagtttgtcttcacattacaa 120
              |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 323434 caaagttagaacattacaagtctcgaaaccgcgagtagcgagtttgtcttcacattacaa 323375

                                                                          
Query: 121    gtcgatatcgatcatctaaactaccatcacatagaagagaggtgcggtcatcacgatgag 180
              |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||
Sbjct: 323374 gtcgatatcgatcatctaaactaccatcacatagaagagagtcgcggtcatcacgatgag 323315

                                                                
Query: 181    cataatcgcgatgaaactggtcttcatccggttcctgcaacgctccctcc 230
              ||| ||||||||||||||||||||||||| ||| || |  ||||||||||
Sbjct: 323314 catcatcgcgatgaaactggtcttcatccagtttctcctccgctccctcc 323265



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                          
Query: 231    gaccgcgagtcggctgcttgatgcaagggaacgtcgtattgtgggtgaacacgtactggc 290
              |||||| || ||||||||||||||| |||||||||||| |||||| |||||| | || ||
Sbjct: 322516 gaccgctaggcggctgcttgatgcaggggaacgtcgtagtgtgggcgaacacatgcttgc 322457

                                 
Query: 291    cgtacctacgaattgtcct 309
              |||||||||||| ||||||
Sbjct: 322456 cgtacctacgaactgtcct 322438

>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score =  274 bits (138), Expect = 4e-70
 Identities = 210/235 (89%), Gaps = 12/235 (5%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagaagattngtctccgaatacaattcatcatattagtctccgaatttaaaataccgaa 60
              |||||||||| ||||| ||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 101041 atagaagattagtctctgaatacaattcatcatattagtctccgaattgaaaagaccgaa 101100

                                                                          
Query: 61     caaagttagaacattacat-----gtctcgagaccgcgagtagcgagtttgtcttcacat 115
              ||||| |||||||||| ||     |||||||||||||||||       ||||||||||||
Sbjct: 101101 caaagatagaacattatattacaagtctcgagaccgcgagt-------ttgtcttcacat 101153

                                                                          
Query: 116    tacaagtcgatatcgatcatctaaactaccatcacatagaagagaggtgcggtcatcacg 175
              |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 101154 tacaagtcgatatcgatcatctaaactatcatcacatagaagagagctgcggtcatcacg 101213

                                                                     
Query: 176    atgagcataatcgcgatgaaactggtcttcatccggttcctgcaacgctccctcc 230
              |||||||| ||| |||||||||| ||||||||||||||||| ||| |||||||||
Sbjct: 101214 atgagcatcatcacgatgaaactcgtcttcatccggttcctccaatgctccctcc 101268



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                          
Query: 231    gaccgcgagtcggctgcttgatgcaagggaacgtcgtattgtgggtgaacacgtactggc 290
              |||||| ||| |||||||||| |||   ||| ||||||||||||| |||||||| || ||
Sbjct: 101997 gaccgccagttggctgcttgacgcagcagaatgtcgtattgtgggagaacacgtgcttgc 102056

                           
Query: 291    cgtacctacgaat 303
              ||||| |||||||
Sbjct: 102057 cgtacttacgaat 102069

>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
             LRK19 (Lrk19) genes, complete cds
          Length = 35872

 Score =  153 bits (77), Expect = 9e-34
 Identities = 92/97 (94%)
 Strand = Plus / Minus

                                                                         
Query: 12    gtctccgaatacaattcatcatattagtctccgaatttaaaataccgaacaaagttagaa 71
             ||||||||||||||||||||||||||||||||||| | |||| ||||||||||| |||||
Sbjct: 15814 gtctccgaatacaattcatcatattagtctccgaaatcaaaagaccgaacaaagatagaa 15755

                                                  
Query: 72    cattacatgtctcgagaccgcgagtagcgagtttgtc 108
             ||||||| |||||||||||||||||||||||||||||
Sbjct: 15754 cattacaagtctcgagaccgcgagtagcgagtttgtc 15718



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                            
Query: 1     atagaagattngtctccgaatacaattcatcatattagtctccgaat 47
             |||||||||| ||||| |||||||||||||||| |||||||||||||
Sbjct: 15851 atagaagattagtctctgaatacaattcatcattttagtctccgaat 15805

>gb|AY089999.1| Lolium perenne CACTA-family transposon sequence
          Length = 12483

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 128   tcgatcatctaaactaccatcacatagaagagag 161
             |||||||||| |||||||||||||||||||||||
Sbjct: 11780 tcgatcatctgaactaccatcacatagaagagag 11747



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 189   cgatgaaactggtcttcatccggttcct 216
             |||||||| ||||||||||| |||||||
Sbjct: 11722 cgatgaaagtggtcttcatctggttcct 11695

>gb|AC158127.3| Mus musculus chromosome 19, clone RP23-135N12, complete sequence
          Length = 217544

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 480    gaggatggaaggcatcagcaaagcag 505
              |||||||||||||||||| |||||||
Sbjct: 164823 gaggatggaaggcatcaggaaagcag 164798

>gb|AC111065.20| Mus musculus chromosome 19, clone RP23-315E4, complete sequence
          Length = 193977

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 480    gaggatggaaggcatcagcaaagcag 505
              |||||||||||||||||| |||||||
Sbjct: 114686 gaggatggaaggcatcaggaaagcag 114711

>emb|BX927392.9| Zebrafish DNA sequence from clone DKEY-17E11 in linkage group 11,
             complete sequence
          Length = 158543

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 505   gccagcaaaataaccacaagatcca 529
             |||||||||||||| ||||||||||
Sbjct: 59581 gccagcaaaataactacaagatcca 59605

>emb|BX538269.1|HSM806518 Homo sapiens genomic DNA; cDNA DKFZp686L0594 (from clone
            DKFZp686L0594)
          Length = 4902

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 544  aaagcaaatcttaaagaagaa 564
            |||||||||||||||||||||
Sbjct: 1106 aaagcaaatcttaaagaagaa 1126

>gb|AC160116.2| Mus musculus BAC clone RP23-456L15 from chromosome 9, complete sequence
          Length = 182041

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 474    aaggctgaggatggaaggcat 494
              |||||||||||||||||||||
Sbjct: 180873 aaggctgaggatggaaggcat 180853

>emb|CR352237.9| Zebrafish DNA sequence from clone CH211-13I11 in linkage group 11,
              complete sequence
          Length = 193648

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 505    gccagcaaaataaccacaagatcca 529
              |||||||||||||| ||||||||||
Sbjct: 175452 gccagcaaaataactacaagatcca 175476

>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 560     aagaaatagctaacagcaataagac 584
               |||||| ||||||||||||||||||
Sbjct: 2686763 aagaaacagctaacagcaataagac 2686787

>gb|AC159894.2| Mus musculus BAC clone RP23-296M10 from chromosome 9, complete sequence
          Length = 198120

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 474    aaggctgaggatggaaggcat 494
              |||||||||||||||||||||
Sbjct: 156538 aaggctgaggatggaaggcat 156558

>emb|BX641042.1|HSM806707 Homo sapiens mRNA; cDNA DKFZp686F1789 (from clone DKFZp686F1789)
          Length = 8620

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 544  aaagcaaatcttaaagaagaa 564
            |||||||||||||||||||||
Sbjct: 2560 aaagcaaatcttaaagaagaa 2580

>emb|AL929514.7| Zebrafish DNA sequence from clone CH211-187D9, complete sequence
          Length = 174473

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 505   gccagcaaaataaccacaagatcca 529
             |||||||||||||| ||||||||||
Sbjct: 22182 gccagcaaaataactacaagatcca 22206

>dbj|AP003179.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-713B9, complete
             sequence
          Length = 112998

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 544   aaagcaaatcttaaagaagaa 564
             |||||||||||||||||||||
Sbjct: 70577 aaagcaaatcttaaagaagaa 70557

>gb|AY147867.2| Acinetobacter sp. 4365 AdeD (adeD) and AdeE (adeE) genes, complete
            cds
          Length = 5420

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  ttacaagtcgatatcgatca 134
            ||||||||||||||||||||
Sbjct: 4053 ttacaagtcgatatcgatca 4072

>ref|XM_594083.1| PREDICTED: Bos taurus similar to olfactory receptor Olr878
           (LOC515967), mRNA
          Length = 945

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 494 tcagcaaagcagccagcaaa 513
           ||||||||||||||||||||
Sbjct: 293 tcagcaaagcagccagcaaa 274

>gb|AC131989.8| Mus musculus chromosome 14, clone RP24-186N15, complete sequence
          Length = 180932

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 389   gtatattttagttgaaacagacta 412
             |||||||||||| |||||||||||
Sbjct: 86204 gtatattttagtagaaacagacta 86181

>ref|XM_416339.1| PREDICTED: Gallus gallus similar to hypothetical protein LOC136306
           (LOC418105), mRNA
          Length = 849

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 210 ggttcctgcaacgctccctc 229
           ||||||||||||||||||||
Sbjct: 383 ggttcctgcaacgctccctc 364

>ref|XM_777508.1| PREDICTED: Strongylocentrotus purpuratus similar to selenoprotein N,
            1 isoform 1 precursor (LOC577268), mRNA
          Length = 1452

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 486  ggaaggcatcagcaaagcag 505
            ||||||||||||||||||||
Sbjct: 1416 ggaaggcatcagcaaagcag 1435

>gb|AC135468.3| Homo sapiens chromosome 1 clone RP11-298P9, complete sequence
          Length = 100208

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 544   aaagcaaatcttaaagaagaaata 567
             ||||||||| ||||||||||||||
Sbjct: 80931 aaagcaaatattaaagaagaaata 80954

>emb|AL732595.13| Mouse DNA sequence from clone RP23-87I3 on chromosome 11 Contains a
             novel pseudogene, a RNA binding motif protein (Rbm8)
             pseudogene, the 5' end of the Acyp2 gene for muscle type
             acylphosphatase 2 and a CpG island, complete sequence
          Length = 115716

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 609   aatccaaaatgcaccaaact 628
             ||||||||||||||||||||
Sbjct: 36666 aatccaaaatgcaccaaact 36685

>gb|BC099330.1| Xenopus laevis cDNA clone MGC:116524 IMAGE:6939082, complete cds
          Length = 1260

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 494  tcagcaaagcagccagcaaaataa 517
            ||||||||||| ||||||||||||
Sbjct: 1007 tcagcaaagcatccagcaaaataa 1030

>gb|BC099287.1| Xenopus laevis cDNA clone MGC:116479 IMAGE:6935510, complete cds
          Length = 1304

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 494  tcagcaaagcagccagcaaaataa 517
            ||||||||||| ||||||||||||
Sbjct: 1049 tcagcaaagcatccagcaaaataa 1072

>emb|CR523955.1| Gallus gallus finished cDNA, clone ChEST695k19
          Length = 1289

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 210 ggttcctgcaacgctccctc 229
           ||||||||||||||||||||
Sbjct: 381 ggttcctgcaacgctccctc 362

>gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete sequence
          Length = 187799

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   agtttgtcttcacattacaa 120
             ||||||||||||||||||||
Sbjct: 71889 agtttgtcttcacattacaa 71870

>emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-932A10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 222275

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   taaactaccatcacatagaa 156
             ||||||||||||||||||||
Sbjct: 36739 taaactaccatcacatagaa 36720


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,979,829
Number of Sequences: 3902068
Number of extensions: 4979829
Number of successful extensions: 89776
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89685
Number of HSP's gapped (non-prelim): 86
length of query: 669
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 646
effective length of database: 17,143,297,704
effective search space: 11074570316784
effective search space used: 11074570316784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)