ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14c23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188015.1| Oryza sativa (japonica cultivar-group), Ozsa843... 391 e-105
2dbj|AK058396.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
3dbj|AK069749.1| Oryza sativa (japonica cultivar-group) cDNA clon... 383 e-103
4gb|AY108196.1| Zea mays PCO089343 mRNA sequence 355 9e-95
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
6dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
7dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
8gb|BT013036.1| Lycopersicon esculentum clone 114285R, mRNA sequence 117 4e-23
9gb|AY206408.1| Ipomoea batatas peroxiredoxin mRNA, complete cds 111 2e-21
10emb|AJ717306.1| Pisum sativum mRNA for mitochondrial peroxiredox... 78 3e-11
11ref|NM_111480.2| Arabidopsis thaliana ATPRXIIF/PRXIIF; antioxida... 66 1e-07
12gb|AY098963.1| Arabidopsis thaliana AT3g06050/F24F17_3 mRNA, com... 66 1e-07
13gb|AY052278.1| Arabidopsis thaliana AT3g06050/F24F17_3 mRNA, com... 66 1e-07
14gb|AC068073.1|AC068073 Arabidopsis thaliana chromosome 3 BAC F24... 66 1e-07
15gb|AY085396.1| Arabidopsis thaliana clone 14986 mRNA, complete s... 66 1e-07
16gb|AC023389.13| Homo sapiens chromosome 17, clone RP11-82O19, co... 42 1.8
17gb|AC087510.7| Homo sapiens chromosome 17, clone RP11-104I20, co... 42 1.8
18ref|NM_102098.2| Arabidopsis thaliana DNA binding / transcriptio... 40 7.0
19gb|AC122403.3| Mus musculus BAC clone RP24-112A10 from chromosom... 40 7.0
20emb|AL589863.11| Human DNA sequence from clone RP11-310J24 on ch... 40 7.0
21gb|AF488622.1| Arabidopsis thaliana clone bHLH094 putative bHLH ... 40 7.0
22dbj|AK080235.1| Mus musculus adult male aorta and vein cDNA, RIK... 40 7.0
23gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12... 40 7.0
24dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
25gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C... 40 7.0
26gb|AC079235.7| Homo sapiens BAC clone RP11-495O23 from 2, comple... 40 7.0
27gb|AY088234.1| Arabidopsis thaliana clone 4596 mRNA, complete se... 40 7.0
28dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
29gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
30emb|AL731872.2|CNS08C8C Oryza sativa chromosome 12, . BAC OJ1003... 40 7.0
31gb|AC018500.4| Homo sapiens chromosome 3 clone RP11-275J11 map 3... 40 7.0
32gb|AC122694.2| Homo sapiens chromosome 5 clone CTD-2013M15, comp... 40 7.0
33emb|AL837525.5| Mouse DNA sequence from clone RP23-233N12 on chr... 40 7.0 
>ref|NM_188015.1| Oryza sativa (japonica cultivar-group), Ozsa8435 predicted mRNA
          Length = 597

 Score =  391 bits (197), Expect = e-105
 Identities = 322/365 (88%)
 Strand = Plus / Minus

                                                                       
Query: 146 tcagatttgatccaagatcacctcagcaccagaaaccttgaagtcagaaggggctttctn 205
           ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||  || 
Sbjct: 597 tcagatttggtccaagatcacctcggcaccagaaaccttgaagtcagaaggagctacctc 538

                                                                       
Query: 206 aacgttcaaagccttgatcttcccatcgtcgacaaaggctgaccacctgtgggagcggcg 265
           ||| || ||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 537 aacattgaaagccttgatcttcccatcgtcaacaaaggctgaccacctgtgggaacggcg 478

                                                                       
Query: 266 gccaagcaaagcagcagagagatctatatccaaatccaagcttttgtggaagctcccgtc 325
           ||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||| ||
Sbjct: 477 gccaagcaaagcagcagagaggtctacttccaaatccaagcttttgtggaaactcccatc 418

                                                                       
Query: 326 aaggtcaccatanaactcaattgcatcttttgcctgtaatttttccgcccatccattcag 385
           ||  |||||||| || ||||| ||||||||||||||||  ||||| ||||||||||||||
Sbjct: 417 aaaatcaccataaaattcaatagcatcttttgcctgtagcttttctgcccatccattcag 358

                                                                       
Query: 386 cacataaggatcatttacagctacacagataacagagtcgatcccttttgctttnaactt 445
             ||||||| ||||| ||||  ||||||||||||||||| | |||||||||||| |||||
Sbjct: 357 ggcataagggtcattcacagagacacagataacagagtcaaccccttttgctttcaactt 298

                                                                       
Query: 446 atcaatgttgttcttgtaactaggaacgtgcnactgcgaacatactcctgtgtatgcacc 505
            |||||||| || || |||||||| |||||   ||| ||||| |||||||||||||||||
Sbjct: 297 gtcaatgttatttttataactagggacgtgtgcctgtgaacagactcctgtgtatgcacc 238

                
Query: 506 cggca 510
            ||||
Sbjct: 237 aggca 233
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>dbj|AK058396.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-A12, full
           insert sequence
          Length = 833

 Score =  391 bits (197), Expect = e-105
 Identities = 322/365 (88%)
 Strand = Plus / Minus

                                                                       
Query: 146 tcagatttgatccaagatcacctcagcaccagaaaccttgaagtcagaaggggctttctn 205
           ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||  || 
Sbjct: 628 tcagatttggtccaagatcacctcggcaccagaaaccttgaagtcagaaggagctacctc 569

                                                                       
Query: 206 aacgttcaaagccttgatcttcccatcgtcgacaaaggctgaccacctgtgggagcggcg 265
           ||| || ||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 568 aacattgaaagccttgatcttcccatcgtcaacaaaggctgaccacctgtgggaacggcg 509

                                                                       
Query: 266 gccaagcaaagcagcagagagatctatatccaaatccaagcttttgtggaagctcccgtc 325
           ||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||| ||
Sbjct: 508 gccaagcaaagcagcagagaggtctacttccaaatccaagcttttgtggaaactcccatc 449

                                                                       
Query: 326 aaggtcaccatanaactcaattgcatcttttgcctgtaatttttccgcccatccattcag 385
           ||  |||||||| || ||||| ||||||||||||||||  ||||| ||||||||||||||
Sbjct: 448 aaaatcaccataaaattcaatagcatcttttgcctgtagcttttctgcccatccattcag 389

                                                                       
Query: 386 cacataaggatcatttacagctacacagataacagagtcgatcccttttgctttnaactt 445
             ||||||| ||||| ||||  ||||||||||||||||| | |||||||||||| |||||
Sbjct: 388 ggcataagggtcattcacagagacacagataacagagtcaaccccttttgctttcaactt 329

                                                                       
Query: 446 atcaatgttgttcttgtaactaggaacgtgcnactgcgaacatactcctgtgtatgcacc 505
            |||||||| || || |||||||| |||||   ||| ||||| |||||||||||||||||
Sbjct: 328 gtcaatgttatttttataactagggacgtgtgcctgtgaacagactcctgtgtatgcacc 269

                
Query: 506 cggca 510
            ||||
Sbjct: 268 aggca 264
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>dbj|AK069749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030N01, full
           insert sequence
          Length = 887

 Score =  383 bits (193), Expect = e-103
 Identities = 321/365 (87%)
 Strand = Plus / Minus

                                                                       
Query: 146 tcagatttgatccaagatcacctcagcaccagaaaccttgaagtcagaaggggctttctn 205
           ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||  || 
Sbjct: 703 tcagatttggtccaagatcacctcggcaccagaaaccttgaagtcagaaggagctacctc 644

                                                                       
Query: 206 aacgttcaaagccttgatcttcccatcgtcgacaaaggctgaccacctgtgggagcggcg 265
           ||| || ||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 643 aacattgaaagccttgatcttcccatcgtcaacaaaggctgaccacctgtgggaacggcg 584

                                                                       
Query: 266 gccaagcaaagcagcagagagatctatatccaaatccaagcttttgtggaagctcccgtc 325
           ||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||| ||
Sbjct: 583 gccaagcaaagcagcagagaggtctacttccaaatccaagcttttgtggaaactcccatc 524

                                                                       
Query: 326 aaggtcaccatanaactcaattgcatcttttgcctgtaatttttccgcccatccattcag 385
           ||  |||||||| || ||||| ||||||||||||||||  ||||| ||||||||||||||
Sbjct: 523 aaaatcaccataaaattcaatagcatcttttgcctgtagcttttctgcccatccattcag 464

                                                                       
Query: 386 cacataaggatcatttacagctacacagataacagagtcgatcccttttgctttnaactt 445
             ||||||| ||||| ||||  ||||||||||||||||| | |||||||| ||| |||||
Sbjct: 463 ggcataagggtcattcacagagacacagataacagagtcaaccccttttgttttcaactt 404

                                                                       
Query: 446 atcaatgttgttcttgtaactaggaacgtgcnactgcgaacatactcctgtgtatgcacc 505
            |||||||| || || |||||||| |||||   ||| ||||| |||||||||||||||||
Sbjct: 403 gtcaatgttatttttataactagggacgtgtgcctgtgaacagactcctgtgtatgcacc 344

                
Query: 506 cggca 510
            ||||
Sbjct: 343 aggca 339
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>gb|AY108196.1| Zea mays PCO089343 mRNA sequence
          Length = 833

 Score =  355 bits (179), Expect = 9e-95
 Identities = 325/375 (86%)
 Strand = Plus / Minus

                                                                       
Query: 143 agctcagatttgatccaagatcacctcagcaccagaaaccttgaagtcagaaggggcttt 202
           ||||||||| || |||||||||||||| |||||||||||||| ||||| || || |||| 
Sbjct: 653 agctcagatctggtccaagatcacctccgcaccagaaaccttaaagtcggacggtgcttc 594

                                                                       
Query: 203 ctnaacgttcaaagccttgatcttcccatcgtcgacaaaggctgaccacctgtgggagcg 262
           || ||| || |||| ||||||||| |||||||| |||||||| ||||||||||| || ||
Sbjct: 593 ctcaacattgaaagacttgatcttaccatcgtcaacaaaggcggaccacctgtgagaacg 534

                                                                       
Query: 263 gcggccaagcaaagcagcagagagatctatatccaaatccaagcttttgtggaagctccc 322
           ||||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||
Sbjct: 533 gcggccaagcaaagcagcagaaaggtctatctccaaatccaagcttttgtggaaactccc 474

                                                                       
Query: 323 gtcaaggtcaccatanaactcaattgcatcttttgcctgtaatttttccgcccatccatt 382
            |||| ||||||||| |||||||||| |||||| || | ||  ||||  |||||||||| 
Sbjct: 473 atcaaagtcaccatagaactcaattgtatctttagcgtctagcttttttgcccatccatc 414

                                                                       
Query: 383 cagcacataaggatcatttacagctacacagataacagagtcgatcccttttgctttnaa 442
           ||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 413 caggacatacggatcattcacagctacacagataacagagtcgattccttttgctttcaa 354

                                                                       
Query: 443 cttatcaatgttgttcttgtaactaggaacgtgcnactgcgaacatactcctgtgtatgc 502
           ||| ||||| || |||||||||||||||||||||   || ||||| || ||||| |||||
Sbjct: 353 cttgtcaatattcttcttgtaactaggaacgtgcgcttgtgaacaaacccctgtatatgc 294

                          
Query: 503 acccggcaacccgaa 517
           ||| ||||| |||||
Sbjct: 293 accgggcaagccgaa 279
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  145 bits (73), Expect = 2e-31
 Identities = 137/159 (86%)
 Strand = Plus / Plus

                                                                           
Query: 348     gcatcttttgcctgtaatttttccgcccatccattcagcacataaggatcatttacagct 407
               ||||||||||||||||  ||||| ||||||||||||||  ||||||| ||||| ||||  
Sbjct: 9119084 gcatcttttgcctgtagcttttctgcccatccattcagggcataagggtcattcacagag 9119143

                                                                           
Query: 408     acacagataacagagtcgatcccttttgctttnaacttatcaatgttgttcttgtaacta 467
               ||||||||||||||||| | |||||||||||| ||||| |||||||| || || ||||||
Sbjct: 9119144 acacagataacagagtcaaccccttttgctttcaacttgtcaatgttatttttataacta 9119203

                                                      
Query: 468     ggaacgtgcnactgcgaacatactcctgtgtatgcaccc 506
               || |||||   ||| ||||| ||||||||||||||||||
Sbjct: 9119204 gggacgtgtgcctgtgaacagactcctgtgtatgcaccc 9119242



 Score =  145 bits (73), Expect = 2e-31
 Identities = 99/108 (91%)
 Strand = Plus / Plus

                                                                           
Query: 146     tcagatttgatccaagatcacctcagcaccagaaaccttgaagtcagaaggggctttctn 205
               ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||  || 
Sbjct: 9117391 tcagatttggtccaagatcacctcggcaccagaaaccttgaagtcagaaggagctacctc 9117450

                                                               
Query: 206     aacgttcaaagccttgatcttcccatcgtcgacaaaggctgaccacct 253
               ||| || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 9117451 aacattgaaagccttgatcttcccatcgtcaacaaaggctgaccacct 9117498



 Score =  115 bits (58), Expect = 1e-22
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                           
Query: 250     acctgtgggagcggcggccaagcaaagcagcagagagatctatatccaaatccaagcttt 309
               |||||||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||
Sbjct: 9118424 acctgtgggaacggcggccaagcaaagcagcagagaggtctacttccaaatccaagcttt 9118483

                                                    
Query: 310     tgtggaagctcccgtcaaggtcaccatanaactcaat 346
               ||||||| ||||| ||||  |||||||| || |||||
Sbjct: 9118484 tgtggaaactcccatcaaaatcaccataaaattcaat 9118520



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 17       tatttgcagcagcaaagtaactgt 40
                ||||||||||||||||| ||||||
Sbjct: 18394168 tatttgcagcagcaaaggaactgt 18394191
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>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0499C11
          Length = 151369

 Score =  145 bits (73), Expect = 2e-31
 Identities = 137/159 (86%)
 Strand = Plus / Plus

                                                                          
Query: 348    gcatcttttgcctgtaatttttccgcccatccattcagcacataaggatcatttacagct 407
              ||||||||||||||||  ||||| ||||||||||||||  ||||||| ||||| ||||  
Sbjct: 148091 gcatcttttgcctgtagcttttctgcccatccattcagggcataagggtcattcacagag 148150

                                                                          
Query: 408    acacagataacagagtcgatcccttttgctttnaacttatcaatgttgttcttgtaacta 467
              ||||||||||||||||| | |||||||||||| ||||| |||||||| || || ||||||
Sbjct: 148151 acacagataacagagtcaaccccttttgctttcaacttgtcaatgttatttttataacta 148210

                                                     
Query: 468    ggaacgtgcnactgcgaacatactcctgtgtatgcaccc 506
              || |||||   ||| ||||| ||||||||||||||||||
Sbjct: 148211 gggacgtgtgcctgtgaacagactcctgtgtatgcaccc 148249



 Score =  145 bits (73), Expect = 2e-31
 Identities = 99/108 (91%)
 Strand = Plus / Plus

                                                                          
Query: 146    tcagatttgatccaagatcacctcagcaccagaaaccttgaagtcagaaggggctttctn 205
              ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||  || 
Sbjct: 146398 tcagatttggtccaagatcacctcggcaccagaaaccttgaagtcagaaggagctacctc 146457

                                                              
Query: 206    aacgttcaaagccttgatcttcccatcgtcgacaaaggctgaccacct 253
              ||| || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 146458 aacattgaaagccttgatcttcccatcgtcaacaaaggctgaccacct 146505



 Score =  115 bits (58), Expect = 1e-22
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                          
Query: 250    acctgtgggagcggcggccaagcaaagcagcagagagatctatatccaaatccaagcttt 309
              |||||||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||
Sbjct: 147431 acctgtgggaacggcggccaagcaaagcagcagagaggtctacttccaaatccaagcttt 147490

                                                   
Query: 310    tgtggaagctcccgtcaaggtcaccatanaactcaat 346
              ||||||| ||||| ||||  |||||||| || |||||
Sbjct: 147491 tgtggaaactcccatcaaaatcaccataaaattcaat 147527
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>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0011D01
          Length = 168655

 Score =  145 bits (73), Expect = 2e-31
 Identities = 137/159 (86%)
 Strand = Plus / Plus

                                                                         
Query: 348   gcatcttttgcctgtaatttttccgcccatccattcagcacataaggatcatttacagct 407
             ||||||||||||||||  ||||| ||||||||||||||  ||||||| ||||| ||||  
Sbjct: 19466 gcatcttttgcctgtagcttttctgcccatccattcagggcataagggtcattcacagag 19525

                                                                         
Query: 408   acacagataacagagtcgatcccttttgctttnaacttatcaatgttgttcttgtaacta 467
             ||||||||||||||||| | |||||||||||| ||||| |||||||| || || ||||||
Sbjct: 19526 acacagataacagagtcaaccccttttgctttcaacttgtcaatgttatttttataacta 19585

                                                    
Query: 468   ggaacgtgcnactgcgaacatactcctgtgtatgcaccc 506
             || |||||   ||| ||||| ||||||||||||||||||
Sbjct: 19586 gggacgtgtgcctgtgaacagactcctgtgtatgcaccc 19624



 Score =  145 bits (73), Expect = 2e-31
 Identities = 99/108 (91%)
 Strand = Plus / Plus

                                                                         
Query: 146   tcagatttgatccaagatcacctcagcaccagaaaccttgaagtcagaaggggctttctn 205
             ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||  || 
Sbjct: 17773 tcagatttggtccaagatcacctcggcaccagaaaccttgaagtcagaaggagctacctc 17832

                                                             
Query: 206   aacgttcaaagccttgatcttcccatcgtcgacaaaggctgaccacct 253
             ||| || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 17833 aacattgaaagccttgatcttcccatcgtcaacaaaggctgaccacct 17880



 Score =  115 bits (58), Expect = 1e-22
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                         
Query: 250   acctgtgggagcggcggccaagcaaagcagcagagagatctatatccaaatccaagcttt 309
             |||||||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||
Sbjct: 18806 acctgtgggaacggcggccaagcaaagcagcagagaggtctacttccaaatccaagcttt 18865

                                                  
Query: 310   tgtggaagctcccgtcaaggtcaccatanaactcaat 346
             ||||||| ||||| ||||  |||||||| || |||||
Sbjct: 18866 tgtggaaactcccatcaaaatcaccataaaattcaat 18902
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>gb|BT013036.1| Lycopersicon esculentum clone 114285R, mRNA sequence
          Length = 772

 Score =  117 bits (59), Expect = 4e-23
 Identities = 236/296 (79%)
 Strand = Plus / Minus

                                                                       
Query: 174 ccagaaaccttgaagtcagaaggggctttctnaacgttcaaagccttgatcttcccatcg 233
           ||||||||||||||||||||||| ||||  | ||| |||| | |||| |  || ||||| 
Sbjct: 584 ccagaaaccttgaagtcagaaggtgcttcttcaacattcagaaccttaacatttccatca 525

                                                                       
Query: 234 tcgacaaaggctgaccacctgtgggagcggcggccaagcaaagcagcagagagatctata 293
            | ||| | || |||||||| || || ||  | |||||||||||||| |||||||| || 
Sbjct: 524 actacatatgccgaccacctatgagatcgaagtccaagcaaagcagccgagagatcaatt 465

                                                                       
Query: 294 tccaaatccaagcttttgtggaagctcccgtcaaggtcaccatanaactcaattgcatct 353
              || || || || ||||||||||| || ||||  |||||||| |||||||| ||||||
Sbjct: 464 gttaagtctaaactcttgtggaagcttccatcaaaatcaccataaaactcaatagcatct 405

                                                                       
Query: 354 tttgcctgtaatttttccgcccatccattcagcacataaggatcatttacagctacacag 413
           || || ||||||||||| ||||| || ||||     || |||||||| ||||| ||||||
Sbjct: 404 ttggcttgtaatttttctgcccaaccgttcatagtgtatggatcattcacagcaacacag 345

                                                                   
Query: 414 ataacagagtcgatcccttttgctttnaacttatcaatgttgttcttgtaactagg 469
           || || |||||||| ||||| || || |||||||||||||| |||||||| |||||
Sbjct: 344 atcactgagtcgattcctttggccttgaacttatcaatgttattcttgtagctagg 289
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>gb|AY206408.1| Ipomoea batatas peroxiredoxin mRNA, complete cds
          Length = 866

 Score =  111 bits (56), Expect = 2e-21
 Identities = 141/170 (82%)
 Strand = Plus / Minus

                                                                       
Query: 300 tccaagcttttgtggaagctcccgtcaaggtcaccatanaactcaattgcatcttttgcc 359
           |||||||| |||||||| ||||| ||||  |||||||| |||||||| ||||||||||| 
Sbjct: 468 tccaagctcttgtggaaactcccatcaaaatcaccatagaactcaatagcatcttttgct 409

                                                                       
Query: 360 tgtaatttttccgcccatccattcagcacataaggatcatttacagctacacagataaca 419
           || |  || || ||||| ||||||| |  ||| || ||||| |||||||||||||| || 
Sbjct: 408 tgaagcttctctgcccagccattcatcgtatatgggtcattgacagctacacagatcacc 349

                                                             
Query: 420 gagtcgatcccttttgctttnaacttatcaatgttgttcttgtaactagg 469
           ||||| || ||||| || || |||||||||||||| |||||||| |||||
Sbjct: 348 gagtcaattcctttggccttaaacttatcaatgttattcttgtagctagg 299
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>emb|AJ717306.1| Pisum sativum mRNA for mitochondrial peroxiredoxin (prx gene)
          Length = 600

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 148/185 (80%)
 Strand = Plus / Minus

                                                                       
Query: 267 ccaagcaaagcagcagagagatctatatccaaatccaagcttttgtggaagctcccgtca 326
           ||||||||| |||||||||||||  ||   || |||||||||||||| |||||||| |||
Sbjct: 479 ccaagcaaaccagcagagagatcagtagttaattccaagcttttgtgaaagctcccatca 420

                                                                       
Query: 327 aggtcaccatanaactcaattgcatcttttgcctgtaatttttccgcccatccattcagc 386
           | ||| ||||| |||||||| |||||||| || || |  || || |||||  ||||||  
Sbjct: 419 aagtccccatagaactcaatagcatctttggcttgaatcttctcagcccaagcattcaca 360

                                                                       
Query: 387 acataaggatcatttacagctacacagataacagagtcgatcccttttgctttnaactta 446
             ||| |||||||| | ||| ||||| |||||||| || | |||||| ||||| ||||| 
Sbjct: 359 gtatatggatcattaatagccacacaaataacagaatcaacccctttagctttaaacttg 300

                
Query: 447 tcaat 451
           |||||
Sbjct: 299 tcaat 295
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>ref|NM_111480.2| Arabidopsis thaliana ATPRXIIF/PRXIIF; antioxidant/ peroxidase
           AT3G06050 (ATPRXIIF/PRXIIF) mRNA, complete cds
          Length = 815

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                       
Query: 393 ggatcatttacagctacacagataacagagtcgatcccttttgctttnaacttatcaatg 452
           |||||||| ||||  |||||||| ||||| || || ||||| ||||| ||||||||||||
Sbjct: 411 ggatcattaacagagacacagatgacagaatcaatgcctttggctttaaacttatcaatg 352

                                                          
Query: 453 ttgttcttgtaactaggaacgtgcnactgcgaacatactcctgtgta 499
           | | ||||||| ||||| || |||  ||| ||||| ||||| |||||
Sbjct: 351 tggctcttgtagctaggcacatgctgctgtgaacaaactcccgtgta 305



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 301 ccaagcttttgtggaagctcccgtcaaggtcaccatanaactcaattgcatcttt 355
           ||||||||||||| ||  |||| ||||  || ||||| |||||||||||||||||
Sbjct: 503 ccaagcttttgtgaaatttcccatcaaaatctccataaaactcaattgcatcttt 449
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>gb|AY098963.1| Arabidopsis thaliana AT3g06050/F24F17_3 mRNA, complete cds
          Length = 606

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                       
Query: 393 ggatcatttacagctacacagataacagagtcgatcccttttgctttnaacttatcaatg 452
           |||||||| ||||  |||||||| ||||| || || ||||| ||||| ||||||||||||
Sbjct: 359 ggatcattaacagagacacagatgacagaatcaatgcctttggctttaaacttatcaatg 300

                                                          
Query: 453 ttgttcttgtaactaggaacgtgcnactgcgaacatactcctgtgta 499
           | | ||||||| ||||| || |||  ||| ||||| ||||| |||||
Sbjct: 299 tggctcttgtagctaggcacatgctgctgtgaacaaactcccgtgta 253



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 301 ccaagcttttgtggaagctcccgtcaaggtcaccatanaactcaattgcatcttt 355
           ||||||||||||| ||  |||| ||||  || ||||| |||||||||||||||||
Sbjct: 451 ccaagcttttgtgaaatttcccatcaaaatctccataaaactcaattgcatcttt 397
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>gb|AY052278.1| Arabidopsis thaliana AT3g06050/F24F17_3 mRNA, complete cds
          Length = 789

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                       
Query: 393 ggatcatttacagctacacagataacagagtcgatcccttttgctttnaacttatcaatg 452
           |||||||| ||||  |||||||| ||||| || || ||||| ||||| ||||||||||||
Sbjct: 389 ggatcattaacagagacacagatgacagaatcaatgcctttggctttaaacttatcaatg 330

                                                          
Query: 453 ttgttcttgtaactaggaacgtgcnactgcgaacatactcctgtgta 499
           | | ||||||| ||||| || |||  ||| ||||| ||||| |||||
Sbjct: 329 tggctcttgtagctaggcacatgctgctgtgaacaaactcccgtgta 283



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 301 ccaagcttttgtggaagctcccgtcaaggtcaccatanaactcaattgcatcttt 355
           ||||||||||||| ||  |||| ||||  || ||||| |||||||||||||||||
Sbjct: 481 ccaagcttttgtgaaatttcccatcaaaatctccataaaactcaattgcatcttt 427
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>gb|AC068073.1|AC068073 Arabidopsis thaliana chromosome 3 BAC F24F17 genomic sequence, complete
             sequence
          Length = 24745

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                         
Query: 393   ggatcatttacagctacacagataacagagtcgatcccttttgctttnaacttatcaatg 452
             |||||||| ||||  |||||||| ||||| || || ||||| ||||| ||||||||||||
Sbjct: 12854 ggatcattaacagagacacagatgacagaatcaatgcctttggctttaaacttatcaatg 12913

                                                            
Query: 453   ttgttcttgtaactaggaacgtgcnactgcgaacatactcctgtgta 499
             | | ||||||| ||||| || |||  ||| ||||| ||||| |||||
Sbjct: 12914 tggctcttgtagctaggcacatgctgctgtgaacaaactcccgtgta 12960
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>gb|AY085396.1| Arabidopsis thaliana clone 14986 mRNA, complete sequence
          Length = 811

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                       
Query: 393 ggatcatttacagctacacagataacagagtcgatcccttttgctttnaacttatcaatg 452
           |||||||| ||||  |||||||| ||||| || || ||||| ||||| ||||||||||||
Sbjct: 412 ggatcattaacagagacacagatgacagaatcaatgcctttggctttaaacttatcaatg 353

                                                          
Query: 453 ttgttcttgtaactaggaacgtgcnactgcgaacatactcctgtgta 499
           | | ||||||| ||||| || |||  ||| ||||| ||||| |||||
Sbjct: 352 tggctcttgtagctaggcacatgctgctgtgaacaaactcccgtgta 306



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 301 ccaagcttttgtggaagctcccgtcaaggtcaccatanaactcaattgcatcttt 355
           ||||||||||||| ||  |||| ||||  || ||||| |||||||||||||||||
Sbjct: 504 ccaagcttttgtgaaatttcccatcaaaatctccataaaactcaattgcatcttt 450
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>gb|AC023389.13| Homo sapiens chromosome 17, clone RP11-82O19, complete sequence
          Length = 127918

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 184   tgaagtcagaaggggctttct 204
             |||||||||||||||||||||
Sbjct: 48509 tgaagtcagaaggggctttct 48489
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>gb|AC087510.7| Homo sapiens chromosome 17, clone RP11-104I20, complete sequence
          Length = 77732

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 184   tgaagtcagaaggggctttct 204
             |||||||||||||||||||||
Sbjct: 69242 tgaagtcagaaggggctttct 69222
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>ref|NM_102098.2| Arabidopsis thaliana DNA binding / transcription factor AT1G22490
           mRNA, complete cds
          Length = 1215

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 441 aacttatcaatgttgttctt 460
           ||||||||||||||||||||
Sbjct: 237 aacttatcaatgttgttctt 218
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>gb|AC122403.3| Mus musculus BAC clone RP24-112A10 from chromosome 16, complete sequence
          Length = 169481

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     gatagcaacgtctttacaca 79
              ||||||||||||||||||||
Sbjct: 105130 gatagcaacgtctttacaca 105149
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>emb|AL589863.11| Human DNA sequence from clone RP11-310J24 on chromosome 10, complete
             sequence
          Length = 168231

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   aaacagggtccagtttcacc 138
             ||||||||||||||||||||
Sbjct: 63451 aaacagggtccagtttcacc 63432
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>gb|AF488622.1| Arabidopsis thaliana clone bHLH094 putative bHLH transcription
           factor mRNA, partial sequence
          Length = 1119

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 441 aacttatcaatgttgttctt 460
           ||||||||||||||||||||
Sbjct: 109 aacttatcaatgttgttctt 90
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>dbj|AK080235.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530086O06
            product:unclassifiable, full insert sequence
          Length = 1530

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 347  tgcatcttttgcctgtaatt 366
            ||||||||||||||||||||
Sbjct: 1500 tgcatcttttgcctgtaatt 1481
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>gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12K8 genomic sequence, complete
             sequence
          Length = 107200

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 441   aacttatcaatgttgttctt 460
             ||||||||||||||||||||
Sbjct: 67679 aacttatcaatgttgttctt 67660
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 297     aaatccaagcttttgtggaa 316
               ||||||||||||||||||||
Sbjct: 7602768 aaatccaagcttttgtggaa 7602749
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>gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C12 map 3p, complete sequence
          Length = 185608

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   catcttttgcctgtaatttt 368
             ||||||||||||||||||||
Sbjct: 29061 catcttttgcctgtaatttt 29080
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>gb|AC079235.7| Homo sapiens BAC clone RP11-495O23 from 2, complete sequence
          Length = 212237

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    cagaaaccttgaagtcagaa 194
              ||||||||||||||||||||
Sbjct: 101165 cagaaaccttgaagtcagaa 101146
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>gb|AY088234.1| Arabidopsis thaliana clone 4596 mRNA, complete sequence
          Length = 1172

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 441 aacttatcaatgttgttctt 460
           ||||||||||||||||||||
Sbjct: 238 aacttatcaatgttgttctt 219
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>dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1003B09
          Length = 155263

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    tatttgcagcagcaaagtaactgt 40
             ||||||||||||||||| ||||||
Sbjct: 17926 tatttgcagcagcaaaggaactgt 17949
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 297     aaatccaagcttttgtggaa 316
               ||||||||||||||||||||
Sbjct: 7602647 aaatccaagcttttgtggaa 7602628
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>emb|AL731872.2|CNS08C8C Oryza sativa chromosome 12, . BAC OJ1003_E07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 113215

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   aaatccaagcttttgtggaa 316
             ||||||||||||||||||||
Sbjct: 90835 aaatccaagcttttgtggaa 90816
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>gb|AC018500.4| Homo sapiens chromosome 3 clone RP11-275J11 map 3p, complete sequence
          Length = 150810

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   catcttttgcctgtaatttt 368
             ||||||||||||||||||||
Sbjct: 53747 catcttttgcctgtaatttt 53728
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>gb|AC122694.2| Homo sapiens chromosome 5 clone CTD-2013M15, complete sequence
          Length = 145789

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   atccaaatccaagcttttgt 312
             ||||||||||||||||||||
Sbjct: 34107 atccaaatccaagcttttgt 34088
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>emb|AL837525.5| Mouse DNA sequence from clone RP23-233N12 on chromosome 4, complete
            sequence
          Length = 15812

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 347  tgcatcttttgcctgtaatt 366
            ||||||||||||||||||||
Sbjct: 9006 tgcatcttttgcctgtaatt 9025


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,692,668
Number of Sequences: 3902068
Number of extensions: 3692668
Number of successful extensions: 65806
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65668
Number of HSP's gapped (non-prelim): 136
length of query: 517
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 494
effective length of database: 17,143,297,704
effective search space: 8468789065776
effective search space used: 8468789065776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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