ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13n17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK069213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 2e-56
2dbj|AK061110.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 2e-56
3gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome... 115 2e-22
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 115 2e-22
6gb|BT018076.1| Zea mays clone EL01N0551G08.c mRNA sequence 68 4e-08
7gb|AY106784.1| Zea mays PCO100577 mRNA sequence 68 4e-08
8ref|NM_118205.1| Arabidopsis thaliana catalytic AT4G20870 mRNA, ... 50 0.010
9gb|DQ226621.1| Boechera divaricarpa isolate SLW-4-B09 mRNA sequence 50 0.010
10emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosome 4, ... 50 0.010
11emb|AL080282.1|ATT13K14 Arabidopsis thaliana DNA chromosome 4, B... 50 0.010
12gb|AY101538.1| Arabidopsis thaliana AT4g20870/T13K14_30 mRNA, co... 50 0.010
13gb|AY058151.1| Arabidopsis thaliana AT4g20870/T13K14_30 mRNA, co... 50 0.010
14gb|AY044315.1| Arabidopsis thaliana fatty acid hydroxylase-like ... 50 0.010
15emb|BX827033.1|CNS0A42J Arabidopsis thaliana Full-length cDNA Co... 50 0.010
16emb|BX828691.1|CNS0A3KV Arabidopsis thaliana Full-length cDNA Co... 50 0.010
17emb|BX829252.1|CNS0A3KD Arabidopsis thaliana Full-length cDNA Co... 50 0.010
18ref|NM_184996.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.038
19gb|AC149429.1| Populus trichocarpa clone Pop1-109D09, complete s... 48 0.038
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.038
21gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno... 48 0.038
22dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
23dbj|AK103085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.038
24dbj|AK059874.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.038
25emb|AL049646.19|HSDJ568F9 Human DNA sequence from clone RP4-568F... 46 0.15
26gb|AC008601.7| Homo sapiens chromosome 5 clone CTB-105L4, comple... 46 0.15
27ref|XM_419627.1| PREDICTED: Gallus gallus similar to hypothetica... 44 0.59
28gb|CP000302.1| Shewanella denitrificans OS217, complete genome 44 0.59
29gb|AC171141.2| Helobdella robusta clone CH306-1B3, complete sequ... 44 0.59
30ref|NM_129030.2| Arabidopsis thaliana FAH1 (FATTY ACID HYDROXYLA... 42 2.3
31ref|XM_363498.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 2.3
32gb|AC147501.9| Medicago truncatula clone mth2-12n2, complete seq... 42 2.3
33gb|AY341245.1| Homo sapiens chromosome condensation 1-like (CHC1... 42 2.3
34emb|AL157813.11| Human DNA sequence from clone RP11-165D7 on chr... 42 2.3
35gb|BT000482.1| Arabidopsis thaliana fatty acid hydroxylase (FAH1... 42 2.3
36gb|AC021010.8| Homo sapiens, clone RP11-69D2, complete sequence 42 2.3
37gb|AC099059.2| Homo sapiens chromosome 3 clone RP11-756A10, comp... 42 2.3
38gb|AY050326.1| Arabidopsis thaliana At2g34770/T29F13.2 mRNA, com... 42 2.3
39emb|AJ877899.1| Human immunodeficiency virus type 1 subtype A pr... 42 2.3
40gb|AF021804.1|AF021804 Arabidopsis thaliana fatty acid hydroxyla... 42 2.3
41ref|NM_115054.2| Arabidopsis thaliana RNA binding / nucleic acid... 40 9.2
42ref|NM_001035763.1| Arabidopsis thaliana RNA binding / nucleic a... 40 9.2
43gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosom... 40 9.2
44gb|AC091319.5| Homo sapiens BAC clone RP11-85N14 from 7, complet... 40 9.2
45gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosom... 40 9.2
46gb|AC126439.3| Mus musculus BAC clone RP24-290I17 from chromosom... 40 9.2
47gb|AC125464.4| Mus musculus BAC clone RP23-113C9 from 14, comple... 40 9.2
48emb|AL122014.27|HSDJ874H1 Human DNA sequence from clone RP5-874H... 40 9.2
49gb|AC068295.15| Homo sapiens 3 BAC RP11-44H4 (Roswell Park Cance... 40 9.2
50gb|AY080846.1| Arabidopsis thaliana unknown protein (At3g51950) ... 40 9.2
51emb|AL672141.12| Mouse DNA sequence from clone RP23-219C18 on ch... 40 9.2
52emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BA... 40 9.2
53dbj|AK123513.1| Homo sapiens cDNA FLJ41519 fis, clone BRTHA20123... 40 9.2
54ref|NM_001027786.1| Caenorhabditis elegans Y82E9BL.18 (Y82E9BL.1... 40 9.2
55emb|BX825099.1|CNS0A4VD Arabidopsis thaliana Full-length cDNA Co... 40 9.2
56dbj|BS000088.1| Pan troglodytes chromosome 22 clone:RP43-078B15,... 40 9.2
57gb|AC131727.4| Mus musculus BAC clone RP23-120E19 from 14, compl... 40 9.2
58emb|AL132800.4|CNS01DTM Human chromosome 14 DNA sequence BAC R-8... 40 9.2
59dbj|AP001688.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 9.2
60dbj|AP002793.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.2
61gb|AC087081.2| Caenorhabditis elegans cosmid Y82E9BL, complete s... 40 9.2
62emb|AL805907.5| Mouse DNA sequence from clone RP23-262M20 on chr... 40 9.2
63dbj|AP000965.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 9.2 
>dbj|AK069213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010G06, full
           insert sequence
          Length = 1392

 Score =  228 bits (115), Expect = 2e-56
 Identities = 277/331 (83%)
 Strand = Plus / Minus

                                                                       
Query: 328 tcttgtcgacggttttcgttgaaggcagcgttccaaatacgtggtcccacagggtcgatg 387
           ||||||||| ||||||||| || ||||  || ||||| || || |||||||| |||||||
Sbjct: 871 tcttgtcgatggttttcgtcgagggcaatgtaccaaacacatgatcccacagcgtcgatg 812

                                                                       
Query: 388 ttattccaaagcccttgttttgaattctgaagtgatggttaagatggtatttcttgagat 447
           ||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct: 811 ttattccgaaccccttgttttggattctgaagtgatggttcagatggtatttcttgaggt 752

                                                                       
Query: 448 attttgctggatcgaacgaggggtgggcgtgatgcaggtagtagtgtgtgcaatcataga 507
            |||| |||||||  | || || ||  | |||||||| |||||||||||||| ||||| |
Sbjct: 751 gttttcctggatcagatgacggctgcccatgatgcagatagtagtgtgtgcagtcataca 692

                                                                       
Query: 508 tcacgtagcccaacaggccacctccaaacacgccaggagtggtagttgtagtagtgaaga 567
           |||| || ||||||||||| ||||||||||||||  |||| ||||| | |||||| |  |
Sbjct: 691 tcacataacccaacaggccgcctccaaacacgccgtgagttgtagtcggagtagtaatta 632

                                                                       
Query: 568 gcttgacaaaattccagaacggatagcacaagatggctgcggcagttggtggaaatacaa 627
           || |||  | ||||||||||||| |||||||||| ||||| || | ||||||||| ||||
Sbjct: 631 gcctgattagattccagaacggaaagcacaagatagctgcagctgctggtggaaagacaa 572

                                          
Query: 628 gtcgaagcccatccattgggtgcttgtgatg 658
           ||||||| || ||  | ||||||||||||||
Sbjct: 571 gtcgaaggccgtcagtcgggtgcttgtgatg 541
to top
>dbj|AK061110.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D02, full
           insert sequence
          Length = 1438

 Score =  228 bits (115), Expect = 2e-56
 Identities = 277/331 (83%)
 Strand = Plus / Minus

                                                                       
Query: 328 tcttgtcgacggttttcgttgaaggcagcgttccaaatacgtggtcccacagggtcgatg 387
           ||||||||| ||||||||| || ||||  || ||||| || || |||||||| |||||||
Sbjct: 893 tcttgtcgatggttttcgtcgagggcaatgtaccaaacacatgatcccacagcgtcgatg 834

                                                                       
Query: 388 ttattccaaagcccttgttttgaattctgaagtgatggttaagatggtatttcttgagat 447
           ||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct: 833 ttattccgaaccccttgttttggattctgaagtgatggttcagatggtatttcttgaggt 774

                                                                       
Query: 448 attttgctggatcgaacgaggggtgggcgtgatgcaggtagtagtgtgtgcaatcataga 507
            |||| |||||||  | || || ||  | |||||||| |||||||||||||| ||||| |
Sbjct: 773 gttttcctggatcagatgacggctgcccatgatgcagatagtagtgtgtgcagtcataca 714

                                                                       
Query: 508 tcacgtagcccaacaggccacctccaaacacgccaggagtggtagttgtagtagtgaaga 567
           |||| || ||||||||||| ||||||||||||||  |||| ||||| | |||||| |  |
Sbjct: 713 tcacataacccaacaggccgcctccaaacacgccgtgagttgtagtcggagtagtaatta 654

                                                                       
Query: 568 gcttgacaaaattccagaacggatagcacaagatggctgcggcagttggtggaaatacaa 627
           || |||  | ||||||||||||| |||||||||| ||||| || | ||||||||| ||||
Sbjct: 653 gcctgattagattccagaacggaaagcacaagatagctgcagctgctggtggaaagacaa 594

                                          
Query: 628 gtcgaagcccatccattgggtgcttgtgatg 658
           ||||||| || ||  | ||||||||||||||
Sbjct: 593 gtcgaaggccgtcagtcgggtgcttgtgatg 563
to top
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone
             OSJNBb0003F09, complete sequence
          Length = 159600

 Score =  115 bits (58), Expect = 2e-22
 Identities = 100/114 (87%)
 Strand = Plus / Minus

                                                                         
Query: 328   tcttgtcgacggttttcgttgaaggcagcgttccaaatacgtggtcccacagggtcgatg 387
             ||||||||| ||||||||| || ||||  || ||||| || || |||||||| |||||||
Sbjct: 63900 tcttgtcgatggttttcgtcgagggcaatgtaccaaacacatgatcccacagcgtcgatg 63841

                                                                   
Query: 388   ttattccaaagcccttgttttgaattctgaagtgatggttaagatggtatttct 441
             ||||||| || ||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 63840 ttattccgaaccccttgttttggattctgaagtgatggttcagatggtatttct 63787



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 75/86 (87%)
 Strand = Plus / Minus

                                                                         
Query: 477   tgatgcaggtagtagtgtgtgcaatcatagatcacgtagcccaacaggccacctccaaac 536
             |||||||| |||||||||||||| ||||| ||||| || ||||||||||| |||||||||
Sbjct: 63658 tgatgcagatagtagtgtgtgcagtcatacatcacataacccaacaggccgcctccaaac 63599

                                       
Query: 537   acgccaggagtggtagttgtagtagt 562
             |||||  |||| ||||| | ||||||
Sbjct: 63598 acgccgtgagttgtagtcggagtagt 63573



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 587   cggatagcacaagatggctgcggcagttggtggaaatacaagtcgaagcccatccattgg 646
             |||| |||||||||| ||||| || | ||||||||| ||||||||||| || ||  | ||
Sbjct: 63441 cggaaagcacaagatagctgcagctgctggtggaaagacaagtcgaaggccgtcagtcgg 63382

                         
Query: 647   gtgcttgtgatg 658
             ||||||||||||
Sbjct: 63381 gtgcttgtgatg 63370
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  115 bits (58), Expect = 2e-22
 Identities = 100/114 (87%)
 Strand = Plus / Minus

                                                                            
Query: 328      tcttgtcgacggttttcgttgaaggcagcgttccaaatacgtggtcccacagggtcgatg 387
                ||||||||| ||||||||| || ||||  || ||||| || || |||||||| |||||||
Sbjct: 26938933 tcttgtcgatggttttcgtcgagggcaatgtaccaaacacatgatcccacagcgtcgatg 26938874

                                                                      
Query: 388      ttattccaaagcccttgttttgaattctgaagtgatggttaagatggtatttct 441
                ||||||| || ||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 26938873 ttattccgaaccccttgttttggattctgaagtgatggttcagatggtatttct 26938820



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 75/86 (87%)
 Strand = Plus / Minus

                                                                            
Query: 477      tgatgcaggtagtagtgtgtgcaatcatagatcacgtagcccaacaggccacctccaaac 536
                |||||||| |||||||||||||| ||||| ||||| || ||||||||||| |||||||||
Sbjct: 26938691 tgatgcagatagtagtgtgtgcagtcatacatcacataacccaacaggccgcctccaaac 26938632

                                          
Query: 537      acgccaggagtggtagttgtagtagt 562
                |||||  |||| ||||| | ||||||
Sbjct: 26938631 acgccgtgagttgtagtcggagtagt 26938606



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                            
Query: 587      cggatagcacaagatggctgcggcagttggtggaaatacaagtcgaagcccatccattgg 646
                |||| |||||||||| ||||| || | ||||||||| ||||||||||| || ||  | ||
Sbjct: 26938474 cggaaagcacaagatagctgcagctgctggtggaaagacaagtcgaaggccgtcagtcgg 26938415

                            
Query: 647      gtgcttgtgatg 658
                ||||||||||||
Sbjct: 26938414 gtgcttgtgatg 26938403
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  115 bits (58), Expect = 2e-22
 Identities = 100/114 (87%)
 Strand = Plus / Minus

                                                                            
Query: 328      tcttgtcgacggttttcgttgaaggcagcgttccaaatacgtggtcccacagggtcgatg 387
                ||||||||| ||||||||| || ||||  || ||||| || || |||||||| |||||||
Sbjct: 26867103 tcttgtcgatggttttcgtcgagggcaatgtaccaaacacatgatcccacagcgtcgatg 26867044

                                                                      
Query: 388      ttattccaaagcccttgttttgaattctgaagtgatggttaagatggtatttct 441
                ||||||| || ||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 26867043 ttattccgaaccccttgttttggattctgaagtgatggttcagatggtatttct 26866990



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 75/86 (87%)
 Strand = Plus / Minus

                                                                            
Query: 477      tgatgcaggtagtagtgtgtgcaatcatagatcacgtagcccaacaggccacctccaaac 536
                |||||||| |||||||||||||| ||||| ||||| || ||||||||||| |||||||||
Sbjct: 26866861 tgatgcagatagtagtgtgtgcagtcatacatcacataacccaacaggccgcctccaaac 26866802

                                          
Query: 537      acgccaggagtggtagttgtagtagt 562
                |||||  |||| ||||| | ||||||
Sbjct: 26866801 acgccgtgagttgtagtcggagtagt 26866776



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                            
Query: 587      cggatagcacaagatggctgcggcagttggtggaaatacaagtcgaagcccatccattgg 646
                |||| |||||||||| ||||| || | ||||||||| ||||||||||| || ||  | ||
Sbjct: 26866644 cggaaagcacaagatagctgcagctgctggtggaaagacaagtcgaaggccgtcagtcgg 26866585

                            
Query: 647      gtgcttgtgatg 658
                ||||||||||||
Sbjct: 26866584 gtgcttgtgatg 26866573
to top
>gb|BT018076.1| Zea mays clone EL01N0551G08.c mRNA sequence
          Length = 1084

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 115/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 396 aagcccttgttttgaattctgaagtgatggttaagatggtatttcttgagatattttgct 455
           ||||||||||  || ||||||||||||||||| || || ||  ||||||||| |||||||
Sbjct: 740 aagcccttgtcctggattctgaagtgatggttgaggtgatacctcttgagatgttttgct 681

                                                                       
Query: 456 ggatcgaacgaggggtgggcgtgatgcaggtagtagtgtgtgcaatcatagatcacgtag 515
           || ||    || || ||  | || |||||||||||||| ||||||||||| ||||| || 
Sbjct: 680 gggtctttggatggttgcccatggtgcaggtagtagtgagtgcaatcatacatcacatat 621

                                 
Query: 516 cccaacaggccacctccaaaca 537
           |||||||| || ||||| ||||
Sbjct: 620 cccaacagaccgcctccgaaca 599
to top
>gb|AY106784.1| Zea mays PCO100577 mRNA sequence
          Length = 1072

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 115/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 396 aagcccttgttttgaattctgaagtgatggttaagatggtatttcttgagatattttgct 455
           ||||||||||  || ||||||||||||||||| || || ||  ||||||||| |||||||
Sbjct: 797 aagcccttgtcctggattctgaagtgatggttgaggtgatacctcttgagatgttttgct 738

                                                                       
Query: 456 ggatcgaacgaggggtgggcgtgatgcaggtagtagtgtgtgcaatcatagatcacgtag 515
           || ||    || || ||  | || |||||||||||||| ||||||||||| ||||| || 
Sbjct: 737 gggtctttggatggttgcccatggtgcaggtagtagtgagtgcaatcatacatcacatat 678

                                 
Query: 516 cccaacaggccacctccaaaca 537
           |||||||| || ||||| ||||
Sbjct: 677 cccaacagaccgcctccgaaca 656
to top
>ref|NM_118205.1| Arabidopsis thaliana catalytic AT4G20870 mRNA, complete cds
          Length = 748

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 644 tgggtgcttgtgatggcatccatgcagaa 672
           |||||||||||||||||||||||| ||||
Sbjct: 390 tgggtgcttgtgatggcatccatgaagaa 362
to top
>gb|DQ226621.1| Boechera divaricarpa isolate SLW-4-B09 mRNA sequence
          Length = 385

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 644 tgggtgcttgtgatggcatccatgcagaa 672
           |||||||||||||||||||||||| ||||
Sbjct: 298 tgggtgcttgtgatggcatccatgaagaa 326
to top
>emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 53
          Length = 197568

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 644    tgggtgcttgtgatggcatccatgcagaa 672
              |||||||||||||||||||||||| ||||
Sbjct: 179280 tgggtgcttgtgatggcatccatgaagaa 179308
to top
>emb|AL080282.1|ATT13K14 Arabidopsis thaliana DNA chromosome 4, BAC clone T13K14 (ESSA project)
          Length = 91570

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 644   tgggtgcttgtgatggcatccatgcagaa 672
             |||||||||||||||||||||||| ||||
Sbjct: 14234 tgggtgcttgtgatggcatccatgaagaa 14262
to top
>gb|AY101538.1| Arabidopsis thaliana AT4g20870/T13K14_30 mRNA, complete cds
          Length = 714

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 644 tgggtgcttgtgatggcatccatgcagaa 672
           |||||||||||||||||||||||| ||||
Sbjct: 390 tgggtgcttgtgatggcatccatgaagaa 362
to top
>gb|AY058151.1| Arabidopsis thaliana AT4g20870/T13K14_30 mRNA, complete cds
          Length = 1049

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 644 tgggtgcttgtgatggcatccatgcagaa 672
           |||||||||||||||||||||||| ||||
Sbjct: 557 tgggtgcttgtgatggcatccatgaagaa 529
to top
>gb|AY044315.1| Arabidopsis thaliana fatty acid hydroxylase-like protein
           (T13K14.30) mRNA, complete cds
          Length = 751

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 644 tgggtgcttgtgatggcatccatgcagaa 672
           |||||||||||||||||||||||| ||||
Sbjct: 390 tgggtgcttgtgatggcatccatgaagaa 362
to top
>emb|BX827033.1|CNS0A42J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB89ZE07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 914

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 644 tgggtgcttgtgatggcatccatgcagaa 672
           |||||||||||||||||||||||| ||||
Sbjct: 420 tgggtgcttgtgatggcatccatgaagaa 392
to top
>emb|BX828691.1|CNS0A3KV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL2ZG08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 956

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 644 tgggtgcttgtgatggcatccatgcagaa 672
           |||||||||||||||||||||||| ||||
Sbjct: 481 tgggtgcttgtgatggcatccatgaagaa 453
to top
>emb|BX829252.1|CNS0A3KD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL84ZE01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 937

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 644 tgggtgcttgtgatggcatccatgcagaa 672
           |||||||||||||||||||||||| ||||
Sbjct: 443 tgggtgcttgtgatggcatccatgaagaa 415
to top
>ref|NM_184996.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 714

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 480 tgcaggtagtagtgtgtgcaatcatagatcacgtagcccaacaggccacctccaaa 535
           |||| ||| ||||| ||||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 554 tgcaagtaatagtgagtgcagtcatacatcacatatcccaacaggccaccaccaaa 499



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 393 ccaaagcccttgttttgaattctgaagtgatggtt 427
           |||||||| |||||||| ||||||||||| |||||
Sbjct: 641 ccaaagcctttgttttggattctgaagtggtggtt 607
to top
>gb|AC149429.1| Populus trichocarpa clone Pop1-109D09, complete sequence
          Length = 94633

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 480   tgcaggtagtagtgtgtgcaatcatagatcacgtagccca 519
             |||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 61403 tgcaggtagtagtgagtgcagtcatacatcacatagccca 61364
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 480      tgcaggtagtagtgtgtgcaatcatagatcacgtagcccaacaggccacctccaaa 535
                |||| ||| ||||| ||||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 32073985 tgcaagtaatagtgagtgcagtcatacatcacatatcccaacaggccaccaccaaa 32073930



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 393      ccaaagcccttgttttgaattctgaagtgatggtt 427
                |||||||| |||||||| ||||||||||| |||||
Sbjct: 32074171 ccaaagcctttgttttggattctgaagtggtggtt 32074137
to top
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete
             sequence
          Length = 178158

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 480   tgcaggtagtagtgtgtgcaatcatagatcacgtagcccaacaggccacctccaaa 535
             |||| ||| ||||| ||||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 75110 tgcaagtaatagtgagtgcagtcatacatcacatatcccaacaggccaccaccaaa 75055



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 393   ccaaagcccttgttttgaattctgaagtgatggtt 427
             |||||||| |||||||| ||||||||||| |||||
Sbjct: 75296 ccaaagcctttgttttggattctgaagtggtggtt 75262
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 480      tgcaggtagtagtgtgtgcaatcatagatcacgtagcccaacaggccacctccaaa 535
                |||| ||| ||||| ||||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 32164497 tgcaagtaatagtgagtgcagtcatacatcacatatcccaacaggccaccaccaaa 32164442



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 393      ccaaagcccttgttttgaattctgaagtgatggtt 427
                |||||||| |||||||| ||||||||||| |||||
Sbjct: 32164683 ccaaagcctttgttttggattctgaagtggtggtt 32164649
to top
>dbj|AK103085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118H09, full
           insert sequence
          Length = 1229

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 480 tgcaggtagtagtgtgtgcaatcatagatcacgtagcccaacaggccacctccaaa 535
           |||| ||| ||||| ||||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 774 tgcaagtaatagtgagtgcagtcatacatcacatatcccaacaggccaccaccaaa 719



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 393 ccaaagcccttgttttgaattctgaagtgatggtt 427
           |||||||| |||||||| ||||||||||| |||||
Sbjct: 861 ccaaagcctttgttttggattctgaagtggtggtt 827
to top
>dbj|AK059874.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F06, full
           insert sequence
          Length = 1045

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 480 tgcaggtagtagtgtgtgcaatcatagatcacgtagcccaacaggccacctccaaa 535
           |||| ||| ||||| ||||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 673 tgcaagtaatagtgagtgcagtcatacatcacatatcccaacaggccaccaccaaa 618



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 393 ccaaagcccttgttttgaattctgaagtgatggtt 427
           |||||||| |||||||| ||||||||||| |||||
Sbjct: 760 ccaaagcctttgttttggattctgaagtggtggtt 726
to top
>emb|AL049646.19|HSDJ568F9 Human DNA sequence from clone RP4-568F9 on chromosome 20 Contains the
             ZNF133 gene for zinc finger protein 133, three novel
             genes, the 3' end of the C20orf12 gene for chromosome 20
             open reading frame 12 and two CpG islands, complete
             sequence
          Length = 155432

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 498   caatcatagatcacgtagcccaa 520
             |||||||||||||||||||||||
Sbjct: 67795 caatcatagatcacgtagcccaa 67773
to top
>gb|AC008601.7| Homo sapiens chromosome 5 clone CTB-105L4, complete sequence
          Length = 106641

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 78    aaaaattatactggacaccaaca 100
             |||||||||||||||||||||||
Sbjct: 46154 aaaaattatactggacaccaaca 46176
to top
>ref|XM_419627.1| PREDICTED: Gallus gallus similar to hypothetical protein
           (LOC421589), mRNA
          Length = 2454

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 541 caggagtggtagttgtagtagt 562
           ||||||||||||||||||||||
Sbjct: 512 caggagtggtagttgtagtagt 491
to top
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 372     tcccacagggtcgatgttattc 393
               ||||||||||||||||||||||
Sbjct: 1271586 tcccacagggtcgatgttattc 1271607
to top
>gb|AC171141.2| Helobdella robusta clone CH306-1B3, complete sequence
          Length = 94001

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 541   caggagtggtagttgtagtagt 562
             ||||||||||||||||||||||
Sbjct: 14240 caggagtggtagttgtagtagt 14219
to top
>ref|NM_129030.2| Arabidopsis thaliana FAH1 (FATTY ACID HYDROXYLASE 1); catalytic
           AT2G34770 (FAH1) mRNA, complete cds
          Length = 1142

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 387 gttattccaaagcccttgttttgaattctgaagtgatggttaagatggtatttcttgaga 446
           ||||| ||||| || ||||  ||||| ||||||||||| || | |||||| |||||||||
Sbjct: 886 gttataccaaatcctttgtcctgaatcctgaagtgatgattcaaatggtacttcttgaga 827

            
Query: 447 t 447
           |
Sbjct: 826 t 826
to top
>ref|XM_363498.1| Magnaporthe grisea 70-15 hypothetical protein (MG01424.4) partial
           mRNA
          Length = 1608

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 384 gatgttattccaaagcccttg 404
           |||||||||||||||||||||
Sbjct: 569 gatgttattccaaagcccttg 549
to top
>gb|AC147501.9| Medicago truncatula clone mth2-12n2, complete sequence
          Length = 140523

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 636   ccatccattgggtgcttgtgatggcatccatgcagaa 672
             |||||||| ||||| ||||| ||||||||||| ||||
Sbjct: 84695 ccatccatggggtgtttgtggtggcatccatgtagaa 84731
to top
>gb|AY341245.1| Homo sapiens chromosome condensation 1-like (CHC1L) gene, complete
            cds
          Length = 37676

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 389  tattccaaagcccttgttttg 409
            |||||||||||||||||||||
Sbjct: 1002 tattccaaagcccttgttttg 982
to top
>emb|AL157813.11| Human DNA sequence from clone RP11-165D7 on chromosome 13 Contains the
             CHC1L gene for chromosome condensation 1-like, 3 novel
             genes and a CpG island, complete sequence
          Length = 114519

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 389   tattccaaagcccttgttttg 409
             |||||||||||||||||||||
Sbjct: 36116 tattccaaagcccttgttttg 36136
to top
>gb|BT000482.1| Arabidopsis thaliana fatty acid hydroxylase (FAH1)
           (At2g34770/T29F13.2) mRNA, complete cds
          Length = 714

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 387 gttattccaaagcccttgttttgaattctgaagtgatggttaagatggtatttcttgaga 446
           ||||| ||||| || ||||  ||||| ||||||||||| || | |||||| |||||||||
Sbjct: 647 gttataccaaatcctttgtcctgaatcctgaagtgatgattcaaatggtacttcttgaga 588

            
Query: 447 t 447
           |
Sbjct: 587 t 587
to top
>gb|AC021010.8| Homo sapiens, clone RP11-69D2, complete sequence
          Length = 187599

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 496    tgcaatcatagatcacgtagcccaa 520
              |||||||||||||||| ||||||||
Sbjct: 165783 tgcaatcatagatcacatagcccaa 165759
to top
>gb|AC099059.2| Homo sapiens chromosome 3 clone RP11-756A10, complete sequence
          Length = 158576

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 140   aaaaacctctctgtacacatgacaa 164
             |||| ||||||||||||||||||||
Sbjct: 89173 aaaaccctctctgtacacatgacaa 89149
to top
>gb|AY050326.1| Arabidopsis thaliana At2g34770/T29F13.2 mRNA, complete cds
          Length = 827

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 387 gttattccaaagcccttgttttgaattctgaagtgatggttaagatggtatttcttgaga 446
           ||||| ||||| || ||||  ||||| ||||||||||| || | |||||| |||||||||
Sbjct: 687 gttataccaaatcctttgtcctgaatcctgaagtgatgattcaaatggtacttcttgaga 628

            
Query: 447 t 447
           |
Sbjct: 627 t 627
to top
>emb|AJ877899.1| Human immunodeficiency virus type 1 subtype A proviral partial
           gp120 gene for envelope glycoprotein gp120, isolate
           97DC.EQTB69 1997
          Length = 584

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 432 tggtatttcttgagatatttt 452
           |||||||||||||||||||||
Sbjct: 28  tggtatttcttgagatatttt 8
to top
>gb|AF021804.1|AF021804 Arabidopsis thaliana fatty acid hydroxylase Fah1p (FAH1) mRNA,
           complete cds
          Length = 714

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 387 gttattccaaagcccttgttttgaattctgaagtgatggttaagatggtatttcttgaga 446
           ||||| ||||| || ||||  ||||| ||||||||||| || | |||||| |||||||||
Sbjct: 647 gttataccaaatcctttgtcctgaatcctgaagtgatgattcaaatggtacttcttgaga 588

            
Query: 447 t 447
           |
Sbjct: 587 t 587
to top
>ref|NM_115054.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT3G51950
           transcript variant AT3G51950.1 mRNA, complete cds
          Length = 2486

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 143 aacctctctgtacacatgacaaca 166
           |||||||||||||||| |||||||
Sbjct: 383 aacctctctgtacacaagacaaca 406
to top
>ref|NM_001035763.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT3G51950
           transcript variant AT3G51950.2 mRNA, complete cds
          Length = 2608

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 143 aacctctctgtacacatgacaaca 166
           |||||||||||||||| |||||||
Sbjct: 417 aacctctctgtacacaagacaaca 440
to top
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence
          Length = 209986

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 535    acacgccaggagtggtagttgtag 558
              ||||||||||||||||||| ||||
Sbjct: 127297 acacgccaggagtggtagtagtag 127320
to top
>gb|AC091319.5| Homo sapiens BAC clone RP11-85N14 from 7, complete sequence
          Length = 14196

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   aaaacttacaaattatatca 51
            ||||||||||||||||||||
Sbjct: 2160 aaaacttacaaattatatca 2141
to top
>gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosome 19, complete
             sequence
          Length = 240536

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 545   agtggtagttgtagtagtga 564
             ||||||||||||||||||||
Sbjct: 79863 agtggtagttgtagtagtga 79882
to top
>gb|AC126439.3| Mus musculus BAC clone RP24-290I17 from chromosome 14, complete
             sequence
          Length = 163978

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   tggcattgcaaggtggtaca 317
             ||||||||||||||||||||
Sbjct: 16115 tggcattgcaaggtggtaca 16134
to top
>gb|AC125464.4| Mus musculus BAC clone RP23-113C9 from 14, complete sequence
          Length = 203804

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    gatggttaagatggtatttc 440
              ||||||||||||||||||||
Sbjct: 114144 gatggttaagatggtatttc 114125
to top
>emb|AL122014.27|HSDJ874H1 Human DNA sequence from clone RP5-874H1 on chromosome 11p12-14.1
             Contains STSs and GSSs, complete sequence
          Length = 98061

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   tattccaaagcccttgtttt 408
             ||||||||||||||||||||
Sbjct: 45717 tattccaaagcccttgtttt 45736
to top
>gb|AC068295.15| Homo sapiens 3 BAC RP11-44H4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 170867

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 518   caacaggccacctccaaacacgccagga 545
             |||||||||||||||| ||| |||||||
Sbjct: 17311 caacaggccacctccagacaagccagga 17338
to top
>gb|AY080846.1| Arabidopsis thaliana unknown protein (At3g51950) mRNA, complete cds
          Length = 2366

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 143 aacctctctgtacacatgacaaca 166
           |||||||||||||||| |||||||
Sbjct: 383 aacctctctgtacacaagacaaca 406
to top
>emb|AL672141.12| Mouse DNA sequence from clone RP23-219C18 on chromosome 11 Contains the
              3' end of the Hs3st3a gene for heparan sulfate
              (glucosamine) 3-O-sulfotransferase 3A and a CpG island,
              complete sequence
          Length = 153658

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 145    cctctctgtacacatgacaacata 168
              ||||||||||||| ||||||||||
Sbjct: 136430 cctctctgtacacgtgacaacata 136453
to top
>emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BAC clone F4F15
          Length = 123209

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 143   aacctctctgtacacatgacaaca 166
             |||||||||||||||| |||||||
Sbjct: 29543 aacctctctgtacacaagacaaca 29520
to top
>dbj|AK123513.1| Homo sapiens cDNA FLJ41519 fis, clone BRTHA2012392, highly  similar
            to Homo sapiens HCDI (HCDI) mRNA
          Length = 2336

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   tgcaattacttggtcccaaa 80
            ||||||||||||||||||||
Sbjct: 1109 tgcaattacttggtcccaaa 1090
to top
>ref|NM_001027786.1| Caenorhabditis elegans Y82E9BL.18 (Y82E9BL.18) mRNA, complete cds
          Length = 1500

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 415 tgaagtgatggttaagatgg 434
           ||||||||||||||||||||
Sbjct: 370 tgaagtgatggttaagatgg 351
to top
>emb|BX825099.1|CNS0A4VD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH9ZE06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2030

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 143 aacctctctgtacacatgacaaca 166
           |||||||||||||||| |||||||
Sbjct: 23  aacctctctgtacacaagacaaca 46
to top
>dbj|BS000088.1| Pan troglodytes chromosome 22 clone:RP43-078B15, map 22, complete
             sequences
          Length = 198333

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 289   cttgatatctggcattgcaaggtg 312
             |||||||||||||||| |||||||
Sbjct: 65962 cttgatatctggcattacaaggtg 65985
to top
>gb|AC131727.4| Mus musculus BAC clone RP23-120E19 from 14, complete sequence
          Length = 208338

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    tggcattgcaaggtggtaca 317
              ||||||||||||||||||||
Sbjct: 193917 tggcattgcaaggtggtaca 193936
to top
>emb|AL132800.4|CNS01DTM Human chromosome 14 DNA sequence BAC R-80A15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185251

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     tgcaattacttggtcccaaa 80
              ||||||||||||||||||||
Sbjct: 126374 tgcaattacttggtcccaaa 126355
to top
>dbj|AP001688.1| Homo sapiens genomic DNA, chromosome 21q, section 32/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 289  cttgatatctggcattgcaaggtg 312
            |||||||||||||||| |||||||
Sbjct: 6624 cttgatatctggcattacaaggtg 6647
to top
>dbj|AP002793.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-691L4, complete
             sequence
          Length = 181140

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   ttgttttgaattctgaagtg 421
             ||||||||||||||||||||
Sbjct: 99058 ttgttttgaattctgaagtg 99039
to top
>gb|AC087081.2| Caenorhabditis elegans cosmid Y82E9BL, complete sequence
          Length = 50455

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   tgaagtgatggttaagatgg 434
             ||||||||||||||||||||
Sbjct: 24512 tgaagtgatggttaagatgg 24493
to top
>emb|AL805907.5| Mouse DNA sequence from clone RP23-262M20 on chromosome X, complete
              sequence
          Length = 221439

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     tggtaaaacttacaaattatatca 51
              ||||||||| ||||||||||||||
Sbjct: 166794 tggtaaaacatacaaattatatca 166817
to top
>dbj|AP000965.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B875P4,
             LL56-APP region, complete sequence
          Length = 88046

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 289   cttgatatctggcattgcaaggtg 312
             |||||||||||||||| |||||||
Sbjct: 64808 cttgatatctggcattacaaggtg 64831


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,308,555
Number of Sequences: 3902068
Number of extensions: 5308555
Number of successful extensions: 106965
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106725
Number of HSP's gapped (non-prelim): 238
length of query: 672
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 649
effective length of database: 17,143,297,704
effective search space: 11126000209896
effective search space used: 11126000209896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top