ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags13n11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X07851.1|TARSBA Wheat mRNA for Rubisco subunit binding-protein alpha subunit Length = 1834 Score = 991 bits (500), Expect = 0.0 Identities = 635/675 (94%), Gaps = 15/675 (2%) Strand = Plus / Minus Query: 62 ttcagatcaggcgaggaaggttacctttcgattcgcaaaaatggcaatcctactct---- 117 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1801 ttcagatcaggcgaggaaggttaccgttcgattcgcaaaaatggcaatcctactcttact 1742 Query: 118 --agacctttttcactttcaattgatctcaaccaaaattctactgcttggcctgaactga 175 |||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 1741 ctagaccttt--cactttcagttgatctcaaccgaaattctactgcttggcctgaactga 1684 Query: 176 agcatctaaaaaacacggacgaggcctgaagag--ctttacag---gctcgatcagacgg 230 |||||||||||| ||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1683 ggcatctaaaaaa-acggaggaggcctgaagagagctttacatacagctcgatcagacgg 1625 Query: 231 agagctgcccctccgctggctccgcgaccttagccttcggcttgggcttctcgacgacga 290 |||||||||||||||||||||| |||||||| | ||| |||||||||||||||||||||| Sbjct: 1624 agagctgcccctccgctggctcggcgaccttgggcttgggcttgggcttctcgacgacga 1565 Query: 291 tcgcttgcgtggtgaggaccattccggacaccgaggcggcgttctggagcgcgcatctcg 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1564 tcgcttgcgtggtgaggaccattccggacaccgaggcggcgttctggagcgcgcatctcg 1505 Query: 351 tcaccttggcggggtcgatgacacccgactcgatcaggttctcgtacttgtctgtcatcg 410 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | Sbjct: 1504 tcaccttggcggggtcgatgacgcccgactcgatcaggttctcgtacttgtcggtcattg 1445 Query: 411 cgttgtaacccatctcccactcgctatccttgatcttctcgatcacaacttccccttcca 470 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1444 cgttgtaacccatctcccactcgctctccttgatcttctcgatcacaacctccccttcca 1385 Query: 471 ctccagcgttgttggcgatcagcgatgccggtgcttgcaatgccttctgaatgatgtcag 530 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1384 ctccggcgttgttggcgatcagcgatgccggtgcttgcaatgccttctgaatgatgtcag 1325 Query: 531 caccaaggcgctcgtcgtggtcttcaattgtttctttgatcgcagggacataggtagata 590 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1324 caccaaggcgctcgtcgtggtcttcgattgtttctttgatcgcagggacataggtagaca 1265 Query: 591 ggtgcacatatgccgcaccaccaccgggaacaatgccctcctcgatggcagcgaaagtgg 650 |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1264 ggtgcacatacgccgcgccaccaccgggaacaatgccctcctcgatggctgcgaaagtgg 1205 Query: 651 cgttctttcgcgtcctcgatccgcagctgacggtcctcgagctctgtctcagttgttgct 710 | ||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 1204 cattc-ttcgcgtcctcgatccgaagctgacggtcttcgagctctgtctcggttgttgct 1146 Query: 711 ccaaccttgatgacg 725 ||||||||||||||| Sbjct: 1145 ccaaccttgatgacg 1131
>emb|AJ234407.1|HVU234407 Hordeum vulgare partial mRNA; clone cMWG0655 Length = 247 Score = 381 bits (192), Expect = e-102 Identities = 212/222 (95%), Gaps = 1/222 (0%) Strand = Plus / Plus Query: 504 cttgcaatgccttctgaatgatgtcagcaccaaggcgctcgtcgtggtcttcaattgttt 563 |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1 cttgcaatgccttctgaatgatgtcagcaccaagnvgctcgbcgtggtcttcaattgttt 60 Query: 564 ctttgatcgcagggacataggtagataggtgcacatatgccgcaccaccaccgggaacaa 623 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ctttgatcgmaggaacataggtagataggtgcacatatgccgcaccaccaccgggaacaa 120 Query: 624 tgccctcctcgatggcagcgaaagtggcgttctttcgcgtcctcgatccgcagctgacgg 683 ||||||||||||||||||||||||||| |||| ||| || |||||||| ||||||||||| Sbjct: 121 tgccctcctcgatggcagcgaaagtggngttc-ttcscgkcctcgatcsgcagctgacgg 179 Query: 684 tcctcgagctctgtctcagttgttgctccaaccttgatgacg 725 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 tcctcgagctctgtctcagttgttgctccaaccttgatgacg 221
>dbj|AK120503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122K17, full insert sequence Length = 2070 Score = 307 bits (155), Expect = 3e-80 Identities = 387/463 (83%), Gaps = 1/463 (0%) Strand = Plus / Minus Query: 262 agccttcggcttgggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacac 321 |||||| ||||| ||||||||||| || || || || ||||| ||||||||||| | ||| Sbjct: 1785 agccttgggcttcggcttctcgacaacaatggcctgtgtggtaaggaccattccagccac 1726 Query: 322 cgaggcggcgttctggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactc 381 ||||||||| |||||||||||||||||||||||||| || ||||| || ||||||| ||| Sbjct: 1725 cgaggcggcattctggagcgcgcatctcgtcaccttagctgggtcaataacacccgcctc 1666 Query: 382 gatcaggttctcgtacttgtctgtcatcgcgttgtaacccatctcccactcgctatcctt 441 |||| |||||| |||||||| ||||||| ||||| || | |||||||||| ||||| Sbjct: 1665 aatcaagttctcatacttgtcgttcatcgcattgtacccgacttcccactcgccgtcctt 1606 Query: 442 gatcttctcgatcacaacttccccttccactccagcgttgttggcgatcagcgatgccgg 501 ||||||||| | || |||||||||||||||||||| |||| ||| ||||| || || || Sbjct: 1605 gatcttctcaactaccacttccccttccactccagcattgtgggcaatcagtgaagcggg 1546 Query: 502 tgcttgcaatgccttctgaatgatgtcagcaccaaggcgctcgtcgtggtcttcaattgt 561 ||| ||| ||||| ||||| ||||| |||||||||||||| || |||||||| ||||| Sbjct: 1545 agctaccaacgccttttgaataatgtctgcaccaaggcgctcatcatggtcttcgattgt 1486 Query: 562 ttctttgatcgcagggacataggtagataggtgcacatatgccgcaccaccaccgggaac 621 |||||||||||||||||| || || || |||||||| || | |||||| || ||||| Sbjct: 1485 ttctttgatcgcagggacggtagttgaaagatgcacatacgctgtaccacctccaggaac 1426 Query: 622 aatgccctcctcgatggcagcgaaagtggcgttctttcgcgtcctcgatccgcagctgac 681 |||||||||||| || || |||||||| || ||| ||||| |||||||| || || || | Sbjct: 1425 aatgccctcctcaatagctgcgaaagttgcattc-ttcgcatcctcgatacgtagttggc 1367 Query: 682 ggtcctcgagctctgtctcagttgttgctccaaccttgatgac 724 ||||||| ||||| |||||||||| || |||||||||||||| Sbjct: 1366 ggtcctcaagctcagtctcagttgcagccccaaccttgatgac 1324
>dbj|AK119223.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-D06, full insert sequence Length = 1119 Score = 307 bits (155), Expect = 3e-80 Identities = 387/463 (83%), Gaps = 1/463 (0%) Strand = Plus / Minus Query: 262 agccttcggcttgggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacac 321 |||||| ||||| ||||||||||| || || || || ||||| ||||||||||| | ||| Sbjct: 854 agccttgggcttcggcttctcgacaacaatggcctgtgtggtaaggaccattccagccac 795 Query: 322 cgaggcggcgttctggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactc 381 ||||||||| |||||||||||||||||||||||||| || ||||| || ||||||| ||| Sbjct: 794 cgaggcggcattctggagcgcgcatctcgtcaccttagctgggtcaataacacccgcctc 735 Query: 382 gatcaggttctcgtacttgtctgtcatcgcgttgtaacccatctcccactcgctatcctt 441 |||| |||||| |||||||| ||||||| ||||| || | |||||||||| ||||| Sbjct: 734 aatcaagttctcatacttgtcgttcatcgcattgtacccgacttcccactcgccgtcctt 675 Query: 442 gatcttctcgatcacaacttccccttccactccagcgttgttggcgatcagcgatgccgg 501 ||||||||| | || |||||||||||||||||||| |||| ||| ||||| || || || Sbjct: 674 gatcttctcaactaccacttccccttccactccagcattgtgggcaatcagtgaagcggg 615 Query: 502 tgcttgcaatgccttctgaatgatgtcagcaccaaggcgctcgtcgtggtcttcaattgt 561 ||| ||| ||||| ||||| ||||| |||||||||||||| || |||||||| ||||| Sbjct: 614 agctaccaacgccttttgaataatgtctgcaccaaggcgctcatcatggtcttcgattgt 555 Query: 562 ttctttgatcgcagggacataggtagataggtgcacatatgccgcaccaccaccgggaac 621 |||||||||||||||||| || || || |||||||| || | |||||| || ||||| Sbjct: 554 ttctttgatcgcagggacggtagttgaaagatgcacatacgctgtaccacctccaggaac 495 Query: 622 aatgccctcctcgatggcagcgaaagtggcgttctttcgcgtcctcgatccgcagctgac 681 |||||||||||| || || |||||||| || ||| ||||| |||||||| || || || | Sbjct: 494 aatgccctcctcaatagctgcgaaagttgcattc-ttcgcatcctcgatacgtagttggc 436 Query: 682 ggtcctcgagctctgtctcagttgttgctccaaccttgatgac 724 ||||||| ||||| |||||||||| || |||||||||||||| Sbjct: 435 ggtcctcaagctcagtctcagttgcagccccaaccttgatgac 393
>dbj|AK100602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107D12, full insert sequence Length = 1985 Score = 307 bits (155), Expect = 3e-80 Identities = 387/463 (83%), Gaps = 1/463 (0%) Strand = Plus / Minus Query: 262 agccttcggcttgggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacac 321 |||||| ||||| ||||||||||| || || || || ||||| ||||||||||| | ||| Sbjct: 1783 agccttgggcttcggcttctcgacaacaatggcctgtgtggtaaggaccattccagccac 1724 Query: 322 cgaggcggcgttctggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactc 381 ||||||||| |||||||||||||||||||||||||| || ||||| || ||||||| ||| Sbjct: 1723 cgaggcggcattctggagcgcgcatctcgtcaccttagctgggtcaataacacccgcctc 1664 Query: 382 gatcaggttctcgtacttgtctgtcatcgcgttgtaacccatctcccactcgctatcctt 441 |||| |||||| |||||||| ||||||| ||||| || | |||||||||| ||||| Sbjct: 1663 aatcaagttctcatacttgtcgttcatcgcattgtacccgacttcccactcgccgtcctt 1604 Query: 442 gatcttctcgatcacaacttccccttccactccagcgttgttggcgatcagcgatgccgg 501 ||||||||| | || |||||||||||||||||||| |||| ||| ||||| || || || Sbjct: 1603 gatcttctcaactaccacttccccttccactccagcattgtgggcaatcagtgaagcggg 1544 Query: 502 tgcttgcaatgccttctgaatgatgtcagcaccaaggcgctcgtcgtggtcttcaattgt 561 ||| ||| ||||| ||||| ||||| |||||||||||||| || |||||||| ||||| Sbjct: 1543 agctaccaacgccttttgaataatgtctgcaccaaggcgctcatcatggtcttcgattgt 1484 Query: 562 ttctttgatcgcagggacataggtagataggtgcacatatgccgcaccaccaccgggaac 621 |||||||||||||||||| || || || |||||||| || | |||||| || ||||| Sbjct: 1483 ttctttgatcgcagggacggtagttgaaagatgcacatacgctgtaccacctccaggaac 1424 Query: 622 aatgccctcctcgatggcagcgaaagtggcgttctttcgcgtcctcgatccgcagctgac 681 |||||||||||| || || |||||||| || ||| ||||| |||||||| || || || | Sbjct: 1423 aatgccctcctcaatagctgcgaaagttgcattc-ttcgcatcctcgatacgtagttggc 1365 Query: 682 ggtcctcgagctctgtctcagttgttgctccaaccttgatgac 724 ||||||| ||||| |||||||||| || |||||||||||||| Sbjct: 1364 ggtcctcaagctcagtctcagttgcagccccaaccttgatgac 1322
>dbj|AK061410.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-B08, full insert sequence Length = 1087 Score = 307 bits (155), Expect = 3e-80 Identities = 387/463 (83%), Gaps = 1/463 (0%) Strand = Plus / Minus Query: 262 agccttcggcttgggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacac 321 |||||| ||||| ||||||||||| || || || || ||||| ||||||||||| | ||| Sbjct: 802 agccttgggcttcggcttctcgacaacaatggcctgtgtggtaaggaccattccagccac 743 Query: 322 cgaggcggcgttctggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactc 381 ||||||||| |||||||||||||||||||||||||| || ||||| || ||||||| ||| Sbjct: 742 cgaggcggcattctggagcgcgcatctcgtcaccttagctgggtcaataacacccgcctc 683 Query: 382 gatcaggttctcgtacttgtctgtcatcgcgttgtaacccatctcccactcgctatcctt 441 |||| |||||| |||||||| ||||||| ||||| || | |||||||||| ||||| Sbjct: 682 aatcaagttctcatacttgtcgttcatcgcattgtacccgacttcccactcgccgtcctt 623 Query: 442 gatcttctcgatcacaacttccccttccactccagcgttgttggcgatcagcgatgccgg 501 ||||||||| | || |||||||||||||||||||| |||| ||| ||||| || || || Sbjct: 622 gatcttctcaactaccacttccccttccactccagcattgtgggcaatcagtgaagcggg 563 Query: 502 tgcttgcaatgccttctgaatgatgtcagcaccaaggcgctcgtcgtggtcttcaattgt 561 ||| ||| ||||| ||||| ||||| |||||||||||||| || |||||||| ||||| Sbjct: 562 agctaccaacgccttttgaataatgtctgcaccaaggcgctcatcatggtcttcgattgt 503 Query: 562 ttctttgatcgcagggacataggtagataggtgcacatatgccgcaccaccaccgggaac 621 |||||||||||||||||| || || || |||||||| || | |||||| || ||||| Sbjct: 502 ttctttgatcgcagggacggtagttgaaagatgcacatacgctgtaccacctccaggaac 443 Query: 622 aatgccctcctcgatggcagcgaaagtggcgttctttcgcgtcctcgatccgcagctgac 681 |||||||||||| || || |||||||| || ||| ||||| |||||||| || || || | Sbjct: 442 aatgccctcctcaatagctgcgaaagttgcattc-ttcgcatcctcgatacgtagttggc 384 Query: 682 ggtcctcgagctctgtctcagttgttgctccaaccttgatgac 724 ||||||| ||||| |||||||||| || |||||||||||||| Sbjct: 383 ggtcctcaagctcagtctcagttgcagccccaaccttgatgac 341
>dbj|AK119217.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E10, full insert sequence Length = 1543 Score = 299 bits (151), Expect = 7e-78 Identities = 386/463 (83%), Gaps = 1/463 (0%) Strand = Plus / Minus Query: 262 agccttcggcttgggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacac 321 |||||| | ||| ||||||||||| || || || || ||||| ||||||||||| | ||| Sbjct: 1312 agccttggacttcggcttctcgacaacaatggcctgtgtggtaaggaccattccagccac 1253 Query: 322 cgaggcggcgttctggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactc 381 ||||||||| |||||||||||||||||||||||||| || ||||| || ||||||| ||| Sbjct: 1252 cgaggcggcattctggagcgcgcatctcgtcaccttagctgggtcaataacacccgcctc 1193 Query: 382 gatcaggttctcgtacttgtctgtcatcgcgttgtaacccatctcccactcgctatcctt 441 |||| |||||| |||||||| ||||||| ||||| || | |||||||||| ||||| Sbjct: 1192 aatcaagttctcatacttgtcgttcatcgcattgtacccgacttcccactcgccgtcctt 1133 Query: 442 gatcttctcgatcacaacttccccttccactccagcgttgttggcgatcagcgatgccgg 501 ||||||||| | || |||||||||||||||||||| |||| ||| ||||| || || || Sbjct: 1132 gatcttctcaactaccacttccccttccactccagcattgtgggcaatcagtgaagcggg 1073 Query: 502 tgcttgcaatgccttctgaatgatgtcagcaccaaggcgctcgtcgtggtcttcaattgt 561 ||| ||| ||||| ||||| ||||| |||||||||||||| || |||||||| ||||| Sbjct: 1072 agctaccaacgccttttgaataatgtctgcaccaaggcgctcatcatggtcttcgattgt 1013 Query: 562 ttctttgatcgcagggacataggtagataggtgcacatatgccgcaccaccaccgggaac 621 |||||||||||||||||| || || || |||||||| || | |||||| || ||||| Sbjct: 1012 ttctttgatcgcagggacggtagttgaaagatgcacatacgctgtaccacctccaggaac 953 Query: 622 aatgccctcctcgatggcagcgaaagtggcgttctttcgcgtcctcgatccgcagctgac 681 |||||||||||| || || |||||||| || ||| ||||| |||||||| || || || | Sbjct: 952 aatgccctcctcaatagctgcgaaagttgcattc-ttcgcatcctcgatacgtagttggc 894 Query: 682 ggtcctcgagctctgtctcagttgttgctccaaccttgatgac 724 ||||||| ||||| |||||||||| || |||||||||||||| Sbjct: 893 ggtcctcaagctcagtctcagttgcagccccaaccttgatgac 851
>gb|BT024101.1| Zea mays clone EL01N0524E01 mRNA sequence Length = 2106 Score = 278 bits (140), Expect = 2e-71 Identities = 400/484 (82%), Gaps = 2/484 (0%) Strand = Plus / Minus Query: 239 ccctccgctggctccgcgaccttagccttcggcttgggcttctcgacgacgatcgcttgc 298 ||||||| |||||| || || | || ||||||||| |||||||| || || || || ||| Sbjct: 1812 ccctccggtggctctgccacttgaggcttcggctttggcttctcaacaacaatggcctgc 1753 Query: 299 gtggtgaggaccattccggacaccgaggcggcgttctggagcgcgcatctcgtcaccttg 358 ||||| ||||||||||| | || ||||| || ||||||||||| || || ||||||||| Sbjct: 1752 gtggttaggaccattccagctactgaggccgcattctggagcgcacacctggtcaccttg 1693 Query: 359 gcggggtcgatgacacccgactcgatcaggttctcgtacttgtctgtcatcgcgttgtaa 418 || |||||||| ||||| | ||| |||||||||||||||||||| ||||| || ||||| Sbjct: 1692 gcagggtcgatcacaccagcctccatcaggttctcgtacttgtcagtcattgcattgtag 1633 Query: 419 cccatctcccactcgctatccttgatcttctcgatcacaacttc-cccttccactccagc 477 |||| |||||| ||||| |||||||||||||||| || ||||| |||||| |||||||| Sbjct: 1632 cccacctcccaatcgctctccttgatcttctcgacaaccacttcacccttctactccagc 1573 Query: 478 gttgttggcgatcagcgatgccggtgcttgcaatgccttctgaatgatgtcagcaccaag 537 |||| || |||| || || |||||| ||||||||| ||||| || ||||| ||||| Sbjct: 1572 attgtgtgcaatcaatgaagcaggtgctaccaatgccttttgaataatatcagcgccaag 1513 Query: 538 gcgctcgtcgtggtcttcaattgtttctttgatcgcagggacataggtagataggtgcac 597 ||||| || |||| ||||||| |||||||||| ||||||| |||||||||||||| Sbjct: 1512 acgctcatcagggtcctcaattgcttctttgatcttagggacaaccgtagataggtgcac 1453 Query: 598 atatgccgcaccaccaccgggaacaatgccctcctcgatggcagcgaaagtggcgttctt 657 ||||||||||||||| || ||||||||||||||||| || || || |||||||| || || Sbjct: 1452 atatgccgcaccacctcctggaacaatgccctcctctatagctgcaaaagtggcatt-tt 1394 Query: 658 tcgcgtcctcgatccgcagctgacggtcctcgagctctgtctcagttgttgctccaacct 717 | || ||||| || | || || |||||||| ||||| |||||||||| |||||||||| Sbjct: 1393 ttgcatcctcaattcttagttggcggtcctcaagctcagtctcagttgcagctccaacct 1334 Query: 718 tgat 721 |||| Sbjct: 1333 tgat 1330
>gb|AY108518.1| Zea mays PCO123570 mRNA sequence Length = 1387 Score = 270 bits (136), Expect = 6e-69 Identities = 399/484 (82%), Gaps = 2/484 (0%) Strand = Plus / Minus Query: 239 ccctccgctggctccgcgaccttagccttcggcttgggcttctcgacgacgatcgcttgc 298 ||||||| |||||| || || | || ||||||||| |||||||| || || || || ||| Sbjct: 1071 ccctccggtggctctgccacttgaggcttcggctttggcttctcaacaacaatggcctgc 1012 Query: 299 gtggtgaggaccattccggacaccgaggcggcgttctggagcgcgcatctcgtcaccttg 358 ||||| ||||||||||| | || ||||| || ||||||||||| || || ||||||||| Sbjct: 1011 gtggttaggaccattccagctactgaggccgcattctggagcgcacacctggtcaccttg 952 Query: 359 gcggggtcgatgacacccgactcgatcaggttctcgtacttgtctgtcatcgcgttgtaa 418 || |||||||| ||||| | ||| |||||||||||||||||||| ||||| || ||||| Sbjct: 951 gcagggtcgatcacaccagcctccatcaggttctcgtacttgtcagtcattgcattgtag 892 Query: 419 cccatctcccactcgctat-ccttgatcttctcgatcacaacttccccttccactccagc 477 |||| |||||| ||||| | ||||||||||||||| || ||||| || || |||||||| Sbjct: 891 cccacctcccaatcgctctgccttgatcttctcgacaaccacttcaccctctactccagc 832 Query: 478 gttgttggcgatcagcgatgccggtgcttgcaatgccttctgaatgatgtcagcaccaag 537 |||| || |||| || || |||||| ||||||||| ||||| || ||||| ||||| Sbjct: 831 attgtgtgcaatcaatgaagcaggtgctaccaatgccttttgaataatatcagcgccaag 772 Query: 538 gcgctcgtcgtggtcttcaattgtttctttgatcgcagggacataggtagataggtgcac 597 ||||| || |||| ||||||| |||||||||| ||||||| |||||||||||||| Sbjct: 771 ccgctcatcagggtcctcaattgcttctttgatcttagggacaaccgtagataggtgcac 712 Query: 598 atatgccgcaccaccaccgggaacaatgccctcctcgatggcagcgaaagtggcgttctt 657 ||||||||||||||| || ||||||||||||||||| || || || |||||||| || || Sbjct: 711 atatgccgcaccacctcctggaacaatgccctcctctatagctgcaaaagtggcatt-tt 653 Query: 658 tcgcgtcctcgatccgcagctgacggtcctcgagctctgtctcagttgttgctccaacct 717 | || ||||| || | ||||| |||||||| ||||| |||||||||| |||||||||| Sbjct: 652 ttgcatcctcaattcttagctgccggtcctcaagctcagtctcagttgcagctccaacct 593 Query: 718 tgat 721 |||| Sbjct: 592 tgat 589
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 180 bits (91), Expect = 4e-42 Identities = 196/231 (84%) Strand = Plus / Minus Query: 262 agccttcggcttgggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacac 321 |||||| ||||| ||||||||||| || || || || ||||| ||||||||||| | ||| Sbjct: 10296639 agccttgggcttcggcttctcgacaacaatggcctgtgtggtaaggaccattccagccac 10296580 Query: 322 cgaggcggcgttctggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactc 381 ||||||||| |||||||||||||||||||||||||| || ||||| || ||||||| ||| Sbjct: 10296579 cgaggcggcattctggagcgcgcatctcgtcaccttagctgggtcaataacacccgcctc 10296520 Query: 382 gatcaggttctcgtacttgtctgtcatcgcgttgtaacccatctcccactcgctatcctt 441 |||| |||||| |||||||| ||||||| ||||| || | |||||||||| ||||| Sbjct: 10296519 aatcaagttctcatacttgtcgttcatcgcattgtacccgacttcccactcgccgtcctt 10296460 Query: 442 gatcttctcgatcacaacttccccttccactccagcgttgttggcgatcag 492 ||||||||| | || |||||||||||||||||||| |||| ||| ||||| Sbjct: 10296459 gatcttctcaactaccacttccccttccactccagcattgtgggcaatcag 10296409 Score = 143 bits (72), Expect = 9e-31 Identities = 178/212 (83%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 513 ccttctgaatgatgtcagcaccaaggcgctcgtcgtggtcttcaattgtttctttgatcg 572 |||| ||||| ||||| |||||||||||||| || |||||||| |||||||||||||||| Sbjct: 10296118 ccttttgaataatgtctgcaccaaggcgctcatcatggtcttcgattgtttctttgatcg 10296059 Query: 573 cagggacataggtagataggtgcacatatgccgcaccaccaccgggaacaatgccctcct 632 ||||||| || || || |||||||| || | |||||| || |||||||||||||||| Sbjct: 10296058 cagggacggtagttgaaagatgcacatacgctgtaccacctccaggaacaatgccctcct 10295999 Query: 633 cgatggcagcgaaagtggcgttctttcgcgtcctcgatccgcagctgacggtcctcgagc 692 | || || |||||||| || ||| ||||| |||||||| || || || |||||||| ||| Sbjct: 10295998 caatagctgcgaaagttgcattc-ttcgcatcctcgatacgtagttggcggtcctcaagc 10295940 Query: 693 tctgtctcagttgttgctccaaccttgatgac 724 || |||||||||| || |||||||||||||| Sbjct: 10295939 tcagtctcagttgcagccccaaccttgatgac 10295908
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 180 bits (91), Expect = 4e-42 Identities = 196/231 (84%) Strand = Plus / Minus Query: 262 agccttcggcttgggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacac 321 |||||| ||||| ||||||||||| || || || || ||||| ||||||||||| | ||| Sbjct: 10296521 agccttgggcttcggcttctcgacaacaatggcctgtgtggtaaggaccattccagccac 10296462 Query: 322 cgaggcggcgttctggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactc 381 ||||||||| |||||||||||||||||||||||||| || ||||| || ||||||| ||| Sbjct: 10296461 cgaggcggcattctggagcgcgcatctcgtcaccttagctgggtcaataacacccgcctc 10296402 Query: 382 gatcaggttctcgtacttgtctgtcatcgcgttgtaacccatctcccactcgctatcctt 441 |||| |||||| |||||||| ||||||| ||||| || | |||||||||| ||||| Sbjct: 10296401 aatcaagttctcatacttgtcgttcatcgcattgtacccgacttcccactcgccgtcctt 10296342 Query: 442 gatcttctcgatcacaacttccccttccactccagcgttgttggcgatcag 492 ||||||||| | || |||||||||||||||||||| |||| ||| ||||| Sbjct: 10296341 gatcttctcaactaccacttccccttccactccagcattgtgggcaatcag 10296291 Score = 143 bits (72), Expect = 9e-31 Identities = 178/212 (83%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 513 ccttctgaatgatgtcagcaccaaggcgctcgtcgtggtcttcaattgtttctttgatcg 572 |||| ||||| ||||| |||||||||||||| || |||||||| |||||||||||||||| Sbjct: 10296000 ccttttgaataatgtctgcaccaaggcgctcatcatggtcttcgattgtttctttgatcg 10295941 Query: 573 cagggacataggtagataggtgcacatatgccgcaccaccaccgggaacaatgccctcct 632 ||||||| || || || |||||||| || | |||||| || |||||||||||||||| Sbjct: 10295940 cagggacggtagttgaaagatgcacatacgctgtaccacctccaggaacaatgccctcct 10295881 Query: 633 cgatggcagcgaaagtggcgttctttcgcgtcctcgatccgcagctgacggtcctcgagc 692 | || || |||||||| || ||| ||||| |||||||| || || || |||||||| ||| Sbjct: 10295880 caatagctgcgaaagttgcattc-ttcgcatcctcgatacgtagttggcggtcctcaagc 10295822 Query: 693 tctgtctcagttgttgctccaaccttgatgac 724 || |||||||||| || |||||||||||||| Sbjct: 10295821 tcagtctcagttgcagccccaaccttgatgac 10295790
>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135439 Score = 180 bits (91), Expect = 4e-42 Identities = 196/231 (84%) Strand = Plus / Minus Query: 262 agccttcggcttgggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacac 321 |||||| ||||| ||||||||||| || || || || ||||| ||||||||||| | ||| Sbjct: 59558 agccttgggcttcggcttctcgacaacaatggcctgtgtggtaaggaccattccagccac 59499 Query: 322 cgaggcggcgttctggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactc 381 ||||||||| |||||||||||||||||||||||||| || ||||| || ||||||| ||| Sbjct: 59498 cgaggcggcattctggagcgcgcatctcgtcaccttagctgggtcaataacacccgcctc 59439 Query: 382 gatcaggttctcgtacttgtctgtcatcgcgttgtaacccatctcccactcgctatcctt 441 |||| |||||| |||||||| ||||||| ||||| || | |||||||||| ||||| Sbjct: 59438 aatcaagttctcatacttgtcgttcatcgcattgtacccgacttcccactcgccgtcctt 59379 Query: 442 gatcttctcgatcacaacttccccttccactccagcgttgttggcgatcag 492 ||||||||| | || |||||||||||||||||||| |||| ||| ||||| Sbjct: 59378 gatcttctcaactaccacttccccttccactccagcattgtgggcaatcag 59328 Score = 143 bits (72), Expect = 9e-31 Identities = 178/212 (83%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 513 ccttctgaatgatgtcagcaccaaggcgctcgtcgtggtcttcaattgtttctttgatcg 572 |||| ||||| ||||| |||||||||||||| || |||||||| |||||||||||||||| Sbjct: 59037 ccttttgaataatgtctgcaccaaggcgctcatcatggtcttcgattgtttctttgatcg 58978 Query: 573 cagggacataggtagataggtgcacatatgccgcaccaccaccgggaacaatgccctcct 632 ||||||| || || || |||||||| || | |||||| || |||||||||||||||| Sbjct: 58977 cagggacggtagttgaaagatgcacatacgctgtaccacctccaggaacaatgccctcct 58918 Query: 633 cgatggcagcgaaagtggcgttctttcgcgtcctcgatccgcagctgacggtcctcgagc 692 | || || |||||||| || ||| ||||| |||||||| || || || |||||||| ||| Sbjct: 58917 caatagctgcgaaagttgcattc-ttcgcatcctcgatacgtagttggcggtcctcaagc 58859 Query: 693 tctgtctcagttgttgctccaaccttgatgac 724 || |||||||||| || |||||||||||||| Sbjct: 58858 tcagtctcagttgcagccccaaccttgatgac 58827
>gb|AY108560.1| Zea mays PCO140434 mRNA sequence Length = 2143 Score = 127 bits (64), Expect = 5e-26 Identities = 353/448 (78%), Gaps = 1/448 (0%) Strand = Plus / Minus Query: 271 cttgggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacaccgaggcggc 330 |||||||||||| || ||||| ||||| || || || |||||||| | ||| ||||| || Sbjct: 1849 cttgggcttctccacaacgattgcttgggtagtcagcaccattccagccacggaggcagc 1790 Query: 331 gttctggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactcgatcaggtt 390 |||||| || ||||| || ||||| ||||| |||||||| ||||| | ||| | |||||| Sbjct: 1789 gttctgcagggcgcacctagtcactttggcagggtcgatcacaccagcctccaccaggtt 1730 Query: 391 ctcgtacttgtctgtcatcgcgttgtaacccatctcccactcgctatccttgatcttctc 450 ||||| |||||| | ||| ||||||||||| | |||||||||||| ||| ||| || || Sbjct: 1729 ctcgtgcttgtccgccatggcgttgtaaccgaactcccactcgctttcccggattttatc 1670 Query: 451 gatcacaacttccccttccactccagcgttgttggcgatcagcgatgccggtgcttgcaa 510 | | || || |||||||| ||||| || | ||| ||||||| ||| ||||| ||| Sbjct: 1669 cacaatcacctcaccttccaccccagcattatgggctatcagcgctgcaggtgccaccaa 1610 Query: 511 tgccttctgaatgatgtcagcaccaaggcgctcgtcgtggtcttcaattgtttctttgat 570 |||||||||||||| |||||||| |||||||| || | || || | || || ||||| Sbjct: 1609 agccttctgaatgatatcagcacctaggcgctcctcaggatcatccaacgtctccttgat 1550 Query: 571 cgcagggacataggtagataggtgcacatatgccgcaccaccaccgggaacaatgccctc 630 || || || | || ||||| || |||||||| ||||| || || |||||||| || || Sbjct: 1549 agccggtacgaatgtcgatagatgaacatatgctgcaccgcctcctggaacaataccttc 1490 Query: 631 ctcgatggcagcgaaagtggcgttctttcgcgtcctcgatccgcagctgacggtcctcga 690 ||| || || || ||||| || ||| ||||||||||| || || |||| |||||||| | Sbjct: 1489 ctctattgctgcaaaagtcgcattc-ttcgcgtcctctatgcggagcttgcggtcctcta 1431 Query: 691 gctctgtctcagttgttgctccaacctt 718 |||||| ||| || | |||||||||||| Sbjct: 1430 gctctgcctcggtcgatgctccaacctt 1403
>emb|Z27222.1|BNPLCAS B.napus mRNA for plastid chaperonin-60 alpha subunit Length = 1975 Score = 83.8 bits (42), Expect = 7e-13 Identities = 100/118 (84%), Gaps = 1/118 (0%) Strand = Plus / Minus Query: 608 ccaccaccgggaacaatgccctcctcgatggcagcgaaagtggcgttctttcgcgtcctc 667 |||||||||||||| || || |||||||| |||||||| || ||||||||| || ||||| Sbjct: 1426 ccaccaccgggaactattccttcctcgatagcagcgaacgttgcgttcttt-gcatcctc 1368 Query: 668 gatccgcagctgacggtcctcgagctctgtctcagttgttgctccaaccttgatgacg 725 || || |||| ||||||||||||||| |||||||| | |||||| || || |||||| Sbjct: 1367 aatacgaagcttacggtcctcgagctcggtctcagtcgctgctccgactttaatgacg 1310 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 443 atcttctcgatcacaacttccccttccactccagcgtt 480 |||||||| | ||||||||||||||| | ||||||||| Sbjct: 1588 atcttctccaccacaacttccccttcgattccagcgtt 1551
>ref|XM_470503.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1998 Score = 81.8 bits (41), Expect = 3e-12 Identities = 212/269 (78%) Strand = Plus / Minus Query: 275 ggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacaccgaggcggcgttc 334 |||||||| || ||||| ||||||||||| || |||||||| | ||||||||| ||||| Sbjct: 1777 ggcttctccacaacgatggcttgcgtggttagtaccattccagccaccgaggctgcgttt 1718 Query: 335 tggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactcgatcaggttctcg 394 || | ||| ||||| |||||||| || ||||| || ||||| | || | || ||||||| Sbjct: 1717 tgcaacgcacatcttgtcacctttgcagggtcaatcacaccagcctgtaccaagttctcg 1658 Query: 395 tacttgtctgtcatcgcgttgtaacccatctcccactcgctatccttgatcttctcgatc 454 | |||| | |||||| ||||| || | |||||| || || ||||||||||| || | Sbjct: 1657 tgtctgtcagccatcgcattgtagccaacctcccattcactctccttgatcttttctaca 1598 Query: 455 acaacttccccttccactccagcgttgttggcgatcagcgatgccggtgcttgcaatgcc 514 | ||||||||||| |||||||| |||| || || || | ||||||||| | ||| Sbjct: 1597 atcacttccccttcaactccagcattgtgtgctattagtgctgccggtgccactagagcc 1538 Query: 515 ttctgaatgatgtcagcaccaaggcgctc 543 || |||||||| ||||||||||||||||| Sbjct: 1537 ttttgaatgatatcagcaccaaggcgctc 1509
>dbj|AK061901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H05, full insert sequence Length = 1107 Score = 81.8 bits (41), Expect = 3e-12 Identities = 212/269 (78%) Strand = Plus / Minus Query: 275 ggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacaccgaggcggcgttc 334 |||||||| || ||||| ||||||||||| || |||||||| | ||||||||| ||||| Sbjct: 886 ggcttctccacaacgatggcttgcgtggttagtaccattccagccaccgaggctgcgttt 827 Query: 335 tggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactcgatcaggttctcg 394 || | ||| ||||| |||||||| || ||||| || ||||| | || | || ||||||| Sbjct: 826 tgcaacgcacatcttgtcacctttgcagggtcaatcacaccagcctgtaccaagttctcg 767 Query: 395 tacttgtctgtcatcgcgttgtaacccatctcccactcgctatccttgatcttctcgatc 454 | |||| | |||||| ||||| || | |||||| || || ||||||||||| || | Sbjct: 766 tgtctgtcagccatcgcattgtagccaacctcccattcactctccttgatcttttctaca 707 Query: 455 acaacttccccttccactccagcgttgttggcgatcagcgatgccggtgcttgcaatgcc 514 | ||||||||||| |||||||| |||| || || || | ||||||||| | ||| Sbjct: 706 atcacttccccttcaactccagcattgtgtgctattagtgctgccggtgccactagagcc 647 Query: 515 ttctgaatgatgtcagcaccaaggcgctc 543 || |||||||| ||||||||||||||||| Sbjct: 646 ttttgaatgatatcagcaccaaggcgctc 618
>ref|NM_128359.3| Arabidopsis thaliana CPN60A; ATP binding / protein binding AT2G28000 (CPN60A) mRNA, complete cds Length = 2103 Score = 79.8 bits (40), Expect = 1e-11 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 605 gcaccaccaccgggaacaatgccctcctcgatggcagcgaaagtggcgttctttcgcgtc 664 ||||||||||| ||||| ||||| |||||||| ||||| || || ||||||||| || || Sbjct: 1519 gcaccaccacctggaactatgccttcctcgatagcagcaaatgttgcgttcttt-gcatc 1461 Query: 665 ctcgatccgcagctgacggtcctcgagctctgtctcagttgttgctcc 712 |||||| || |||| ||||||||| ||||| || ||||||| |||||| Sbjct: 1460 ctcgatacgaagcttacggtcctcaagctcagtttcagttgctgctcc 1413
>gb|BT014158.1| Lycopersicon esculentum clone 133278F, mRNA sequence Length = 2098 Score = 79.8 bits (40), Expect = 1e-11 Identities = 211/268 (78%) Strand = Plus / Minus Query: 264 ccttcggcttgggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacaccg 323 |||| ||||| ||||||||||| || || ||||| ||||| || |||||||| || || | Sbjct: 1795 ccttaggctttggcttctcgaccactatggcttgtgtggtcagcaccattcctgaaactg 1736 Query: 324 aggcggcgttctggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactcga 383 | || | ||||| | || ||||| ||||||||||| || |||||||| || | || | Sbjct: 1735 atgctgaattctgcaaggcacatcttgtcaccttggctggatcgatgactccagcttcca 1676 Query: 384 tcaggttctcgtacttgtctgtcatcgcgttgtaacccatctcccactcgctatccttga 443 || |||||||| | ||||||||||||||| |||||||||||||| ||| ||||| | Sbjct: 1675 cgagattctcgtattggtctgtcatcgcgttataacccatctcccattcggcttccttca 1616 Query: 444 tcttctcgatcacaacttccccttccactccagcgttgttggcgatcagcgatgccggtg 503 |||||| | || ||||| ||||| ||||| || || | ||| |||| ||||| || | Sbjct: 1615 ccttctccacgactacttctccttcaactccggcattttgggctatcaaagatgctgggg 1556 Query: 504 cttgcaatgccttctgaatgatgtcagc 531 || ||||||||| |||||||||||||| Sbjct: 1555 ctaccaatgccttttgaatgatgtcagc 1528
>gb|BT008784.1| Arabidopsis thaliana At2g28000 gene, complete cds Length = 1761 Score = 79.8 bits (40), Expect = 1e-11 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 605 gcaccaccaccgggaacaatgccctcctcgatggcagcgaaagtggcgttctttcgcgtc 664 ||||||||||| ||||| ||||| |||||||| ||||| || || ||||||||| || || Sbjct: 1382 gcaccaccacctggaactatgccttcctcgatagcagcaaatgttgcgttcttt-gcatc 1324 Query: 665 ctcgatccgcagctgacggtcctcgagctctgtctcagttgttgctcc 712 |||||| || |||| ||||||||| ||||| || ||||||| |||||| Sbjct: 1323 ctcgatacgaagcttacggtcctcaagctcagtttcagttgctgctcc 1276
>gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map mi54, complete sequence Length = 94884 Score = 79.8 bits (40), Expect = 1e-11 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 605 gcaccaccaccgggaacaatgccctcctcgatggcagcgaaagtggcgttctttcgcgtc 664 ||||||||||| ||||| ||||| |||||||| ||||| || || ||||||||| || || Sbjct: 32299 gcaccaccacctggaactatgccttcctcgatagcagcaaatgttgcgttcttt-gcatc 32357 Query: 665 ctcgatccgcagctgacggtcctcgagctctgtctcagttgttgctcc 712 |||||| || |||| ||||||||| ||||| || ||||||| |||||| Sbjct: 32358 ctcgatacgaagcttacggtcctcaagctcagtttcagttgctgctcc 32405
>dbj|AK222126.1| Arabidopsis thaliana mRNA for putative rubisco subunit binding-protein alpha subunit, partial cds, clone: RAFL22-94-G01 Length = 1181 Score = 79.8 bits (40), Expect = 1e-11 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 605 gcaccaccaccgggaacaatgccctcctcgatggcagcgaaagtggcgttctttcgcgtc 664 ||||||||||| ||||| ||||| |||||||| ||||| || || ||||||||| || || Sbjct: 623 gcaccaccacctggaactatgccttcctcgatagcagcaaatgttgcgttcttt-gcatc 565 Query: 665 ctcgatccgcagctgacggtcctcgagctctgtctcagttgttgctcc 712 |||||| || |||| ||||||||| ||||| || ||||||| |||||| Sbjct: 564 ctcgatacgaagcttacggtcctcaagctcagtttcagttgctgctcc 517
>gb|U49357.1|ATU49357 Arabidopsis thaliana chaperonin-60 alpha subunit gene, nuclear gene encoding plastid protein, complete cds Length = 4365 Score = 79.8 bits (40), Expect = 1e-11 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 605 gcaccaccaccgggaacaatgccctcctcgatggcagcgaaagtggcgttctttcgcgtc 664 ||||||||||| ||||| ||||| |||||||| ||||| || || ||||||||| || || Sbjct: 2774 gcaccaccacctggaactatgccttcctcgatagcagcaaatgttgcgttcttt-gcatc 2716 Query: 665 ctcgatccgcagctgacggtcctcgagctctgtctcagttgttgctcc 712 |||||| || |||| ||||||||| ||||| || ||||||| |||||| Sbjct: 2715 ctcgatacgaagcttacggtcctcaagctcagtttcagttgctgctcc 2668
>emb|BX819680.1|CNS0A9ZT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZF10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2019 Score = 79.8 bits (40), Expect = 1e-11 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 605 gcaccaccaccgggaacaatgccctcctcgatggcagcgaaagtggcgttctttcgcgtc 664 ||||||||||| ||||| ||||| |||||||| ||||| || || ||||||||| || || Sbjct: 1448 gcaccaccacctggaactatgccttcctcgatagcagcaaatgttgcgttcttt-gcatc 1390 Query: 665 ctcgatccgcagctgacggtcctcgagctctgtctcagttgttgctcc 712 |||||| || |||| ||||||||| ||||| || ||||||| |||||| Sbjct: 1389 ctcgatacgaagcttacggtcctcaagctcagtttcagttgctgctcc 1342
>gb|AY086555.1| Arabidopsis thaliana clone 25773 mRNA, complete sequence Length = 1996 Score = 79.8 bits (40), Expect = 1e-11 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 605 gcaccaccaccgggaacaatgccctcctcgatggcagcgaaagtggcgttctttcgcgtc 664 ||||||||||| ||||| ||||| |||||||| ||||| || || ||||||||| || || Sbjct: 1459 gcaccaccacctggaactatgccttcctcgatagcagcaaatgttgcgttcttt-gcatc 1401 Query: 665 ctcgatccgcagctgacggtcctcgagctctgtctcagttgttgctcc 712 |||||| || |||| ||||||||| ||||| || ||||||| |||||| Sbjct: 1400 ctcgatacgaagcttacggtcctcaagctcagtttcagttgctgctcc 1353
>gb|BT002441.1| Arabidopsis thaliana putative rubisco subunit binding-protein alpha subunit (At2g28000) mRNA, complete cds Length = 2020 Score = 79.8 bits (40), Expect = 1e-11 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 605 gcaccaccaccgggaacaatgccctcctcgatggcagcgaaagtggcgttctttcgcgtc 664 ||||||||||| ||||| ||||| |||||||| ||||| || || ||||||||| || || Sbjct: 1464 gcaccaccacctggaactatgccttcctcgatagcagcaaatgttgcgttcttt-gcatc 1406 Query: 665 ctcgatccgcagctgacggtcctcgagctctgtctcagttgttgctcc 712 |||||| || |||| ||||||||| ||||| || ||||||| |||||| Sbjct: 1405 ctcgatacgaagcttacggtcctcaagctcagtttcagttgctgctcc 1358
>dbj|AK222099.1| Arabidopsis thaliana mRNA for putative rubisco subunit binding-protein alpha subunit, partial cds, clone: RAFL22-88-A01 Length = 645 Score = 75.8 bits (38), Expect = 2e-10 Identities = 90/106 (84%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 605 gcaccaccaccgggaacaatgccctcctcgatggcagcgaaagtggcgttctttcgcgtc 664 ||||||||||| ||||| ||||| |||||||| ||||| || || ||||||||| || || Sbjct: 110 gcaccaccacctggaactatgccttcctcgatagcagcaaatgttgcgttcttt-gcatc 52 Query: 665 ctcgatccgcagctgacggtcctcgagctctgtctcagttgttgct 710 |||||| || |||| ||||||||| ||||| || ||||||| |||| Sbjct: 51 ctcgatacgaagcttacggtcctcaagctcagtttcagttgctgct 6
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 71.9 bits (36), Expect = 3e-09 Identities = 165/208 (79%) Strand = Plus / Plus Query: 275 ggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacaccgaggcggcgttc 334 |||||||| || ||||| ||||||||||| || |||||||| | ||||||||| ||||| Sbjct: 35977733 ggcttctccacaacgatggcttgcgtggttagtaccattccagccaccgaggctgcgttt 35977792 Query: 335 tggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactcgatcaggttctcg 394 || | ||| ||||| |||||||| || ||||| || ||||| | || | || ||||||| Sbjct: 35977793 tgcaacgcacatcttgtcacctttgcagggtcaatcacaccagcctgtaccaagttctcg 35977852 Query: 395 tacttgtctgtcatcgcgttgtaacccatctcccactcgctatccttgatcttctcgatc 454 | |||| | |||||| ||||| || | |||||| || || ||||||||||| || | Sbjct: 35977853 tgtctgtcagccatcgcattgtagccaacctcccattcactctccttgatcttttctaca 35977912 Query: 455 acaacttccccttccactccagcgttgt 482 | ||||||||||| |||||||| |||| Sbjct: 35977913 atcacttccccttcaactccagcattgt 35977940 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 513 ccttctgaatgatgtcagcaccaaggcgctc 543 |||| |||||||| ||||||||||||||||| Sbjct: 35978185 ccttttgaatgatatcagcaccaaggcgctc 35978215
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 71.9 bits (36), Expect = 3e-09 Identities = 165/208 (79%) Strand = Plus / Plus Query: 275 ggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacaccgaggcggcgttc 334 |||||||| || ||||| ||||||||||| || |||||||| | ||||||||| ||||| Sbjct: 39244 ggcttctccacaacgatggcttgcgtggttagtaccattccagccaccgaggctgcgttt 39303 Query: 335 tggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactcgatcaggttctcg 394 || | ||| ||||| |||||||| || ||||| || ||||| | || | || ||||||| Sbjct: 39304 tgcaacgcacatcttgtcacctttgcagggtcaatcacaccagcctgtaccaagttctcg 39363 Query: 395 tacttgtctgtcatcgcgttgtaacccatctcccactcgctatccttgatcttctcgatc 454 | |||| | |||||| ||||| || | |||||| || || ||||||||||| || | Sbjct: 39364 tgtctgtcagccatcgcattgtagccaacctcccattcactctccttgatcttttctaca 39423 Query: 455 acaacttccccttccactccagcgttgt 482 | ||||||||||| |||||||| |||| Sbjct: 39424 atcacttccccttcaactccagcattgt 39451 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 513 ccttctgaatgatgtcagcaccaaggcgctc 543 |||| |||||||| ||||||||||||||||| Sbjct: 39696 ccttttgaatgatatcagcaccaaggcgctc 39726
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 71.9 bits (36), Expect = 3e-09 Identities = 165/208 (79%) Strand = Plus / Plus Query: 275 ggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacaccgaggcggcgttc 334 |||||||| || ||||| ||||||||||| || |||||||| | ||||||||| ||||| Sbjct: 36067807 ggcttctccacaacgatggcttgcgtggttagtaccattccagccaccgaggctgcgttt 36067866 Query: 335 tggagcgcgcatctcgtcaccttggcggggtcgatgacacccgactcgatcaggttctcg 394 || | ||| ||||| |||||||| || ||||| || ||||| | || | || ||||||| Sbjct: 36067867 tgcaacgcacatcttgtcacctttgcagggtcaatcacaccagcctgtaccaagttctcg 36067926 Query: 395 tacttgtctgtcatcgcgttgtaacccatctcccactcgctatccttgatcttctcgatc 454 | |||| | |||||| ||||| || | |||||| || || ||||||||||| || | Sbjct: 36067927 tgtctgtcagccatcgcattgtagccaacctcccattcactctccttgatcttttctaca 36067986 Query: 455 acaacttccccttccactccagcgttgt 482 | ||||||||||| |||||||| |||| Sbjct: 36067987 atcacttccccttcaactccagcattgt 36068014 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 513 ccttctgaatgatgtcagcaccaaggcgctc 543 |||| |||||||| ||||||||||||||||| Sbjct: 36068259 ccttttgaatgatatcagcaccaaggcgctc 36068289
>gb|M35599.1|BNA60CPNA B.napus plastid 60-kDa chaperonin-60 alpha-polypeptide (cpn-60 alpha) mRNA, 3' end Length = 1789 Score = 63.9 bits (32), Expect = 7e-07 Identities = 63/72 (87%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 632 tcgatggcagcgaaagtggcgttctttcgcgtcctcgatccgcagctgacggtcctcgag 691 ||||| ||||| || || |||||||| |||||||||||| || |||| |||||||||||| Sbjct: 1237 tcgattgcagcaaatgtagcgttctt-cgcgtcctcgatacgaagcttacggtcctcgag 1179 Query: 692 ctctgtctcagt 703 ||| |||||||| Sbjct: 1178 ctcagtctcagt 1167
>gb|DQ295240.1| Uncultured marine bacterium Ant29B7, partial genomic sequence Length = 40351 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 606 caccaccaccgggaacaatgccctcctcgatggcagc 642 ||||||| ||||||||||| ||||||||||||||||| Sbjct: 26691 caccaccgccgggaacaataccctcctcgatggcagc 26655
>ref|XM_814415.1| Trypanosoma cruzi strain CL Brener chaperonin HSP60, mitochondrial precursor (Tc00.1047053507641.290) partial mRNA Length = 1680 Score = 54.0 bits (27), Expect = 7e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 606 caccaccaccgggaacaatgccctcct 632 ||||||||||||||||||||||||||| Sbjct: 1279 caccaccaccgggaacaatgccctcct 1253
>emb|X95971.1|SLGROEL2G S.lividans groEL2 gene Length = 2192 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 326 gcggcgttctggagcgcgcatctcgtcaccttggcggggtcga 368 |||||||||||||||||| | | |||||||||||| ||||||| Sbjct: 1992 gcggcgttctggagcgcggaacgcgtcaccttggccgggtcga 1950
>emb|X67473.1|TCHSP60 T.cruzi hsp60 gene Length = 2100 Score = 54.0 bits (27), Expect = 7e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 606 caccaccaccgggaacaatgccctcct 632 ||||||||||||||||||||||||||| Sbjct: 1686 caccaccaccgggaacaatgccctcct 1660
>gb|L08791.1|TRBHSP60A Trypanosoma cruzi heat shock protein 60 mRNA, complete cds and flanking regions Length = 2020 Score = 54.0 bits (27), Expect = 7e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 606 caccaccaccgggaacaatgccctcct 632 ||||||||||||||||||||||||||| Sbjct: 1424 caccaccaccgggaacaatgccctcct 1398
>gb|M76658.1|STMGROELY Streptomyces albus open reading frame (GROEL2) gene, complete cds Length = 1814 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 326 gcggcgttctggagcgcgcatctcgtcaccttggcggggtcga 368 |||||||||||||||||| | | |||||||||||| ||||||| Sbjct: 1614 gcggcgttctggagcgcggaacgcgtcaccttggccgggtcga 1572
>gb|L27472.1|CRECPN1B Chlamydomonas reinhardtii chaperonin alpha-like subunit, complete cds Length = 2420 Score = 50.1 bits (25), Expect = 0.010 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 614 ccgggaacaatgccctcctcgatggcagcgaaagtggcgttctttcgcgtcctcgatccg 673 ||||| || ||||||||||| | ||| ||||| ||||||||| || |||||||| || || Sbjct: 1345 ccgggcacgatgccctcctccacggcggcgaaggtggcgttc-ttggcgtcctcaatgcg 1287 Query: 674 cagctgacggtcctcgagctc 694 ||||| |||||||| ||||| Sbjct: 1286 cagcttgcggtcctccagctc 1266 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gtcaccttggcggggtcgat 369 |||||||||||||||||||| Sbjct: 1609 gtcaccttggcggggtcgat 1590
>gb|AY389619.1| Hyacinthus orientalis chaperonin groEL mRNA, partial cds Length = 313 Score = 48.1 bits (24), Expect = 0.041 Identities = 51/60 (85%) Strand = Plus / Minus Query: 265 cttcggcttgggcttctcgacgacgatcgcttgcgtggtgaggaccattccggacaccga 324 |||||||||||||||||| || || || ||||| || || ||||||||||| | |||||| Sbjct: 101 cttcggcttgggcttctccaccacaatggcttgtgttgttaggaccattccagccaccga 42
>gb|BT013144.1| Lycopersicon esculentum clone 134139R, mRNA sequence Length = 2052 Score = 46.1 bits (23), Expect = 0.16 Identities = 68/83 (81%) Strand = Plus / Minus Query: 395 tacttgtctgtcatcgcgttgtaacccatctcccactcgctatccttgatcttctcgatc 454 |||||||| ||||| || ||||||||||||| ||| | ||| |||| |||||||| | Sbjct: 1676 tacttgtcggtcattgcattgtaacccatcttccatttgctgccctttatcttctccact 1617 Query: 455 acaacttccccttccactccagc 477 || ||||||||||| || ||||| Sbjct: 1616 actacttccccttcaaccccagc 1594 Score = 40.1 bits (20), Expect = 9.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 605 gcaccaccaccgggaacaatgccctcctcgatggcagcgaaagt 648 ||||||||||| || ||||| ||||| || || ||||||||||| Sbjct: 1466 gcaccaccaccaggtacaattccctcttcaattgcagcgaaagt 1423
>ref|XM_814413.1| Trypanosoma cruzi strain CL Brener chaperonin HSP60, mitochondrial precursor (Tc00.1047053507641.280) partial mRNA Length = 1683 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 606 caccaccaccgggaacaatgccctcct 632 ||||||||||||||||||| ||||||| Sbjct: 1273 caccaccaccgggaacaataccctcct 1247
>ref|XM_814417.1| Trypanosoma cruzi strain CL Brener chaperonin HSP60, mitochondrial precursor (Tc00.1047053507641.300) partial mRNA Length = 787 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 606 caccaccaccgggaacaatgccctcct 632 ||||||||||||||||||| ||||||| Sbjct: 377 caccaccaccgggaacaataccctcct 351
>emb|X95992.1|EGHSP60GN E.gracilis mRNA for heat shock protein 60 Length = 1946 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 605 gcaccaccaccgggaacaatgccctc 630 ||||||||||||||||| |||||||| Sbjct: 1297 gcaccaccaccgggaacgatgccctc 1272
>emb|X07852.1|RCRSBA Castor-bean mRNA for Rubisco subunit binding-protein alpha subunit Length = 1488 Score = 44.1 bits (22), Expect = 0.64 Identities = 49/58 (84%) Strand = Plus / Minus Query: 600 atgccgcaccaccaccgggaacaatgccctcctcgatggcagcgaaagtggcgttctt 657 |||| ||||||||||| || |||||||| ||||| || ||||| || || |||||||| Sbjct: 1217 atgcagcaccaccaccagggacaatgccttcctctattgcagcaaatgtagcgttctt 1160
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 352 caccttggcggggtcgatgacacccgact 380 |||||| || ||||||||||||||||||| Sbjct: 423825 caccttcgccgggtcgatgacacccgact 423853
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 ggcggcgttctggagcgcgca 345 ||||||||||||||||||||| Sbjct: 752794 ggcggcgttctggagcgcgca 752774
>gb|BT013632.1| Lycopersicon esculentum clone 132434F, mRNA sequence Length = 2127 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 606 caccaccaccgggaacaatgccctc 630 |||||||||| |||||||||||||| Sbjct: 1435 caccaccacctggaacaatgccctc 1411
>gb|AY545024.1| Burkholderia pseudomallei clone BPtf0037 putative AraC/XylS family transcription factor gene, complete cds Length = 984 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 ggcggcgttctggagcgcgca 345 ||||||||||||||||||||| Sbjct: 69 ggcggcgttctggagcgcgca 89
>ref|XM_721409.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05940) partial mRNA Length = 1401 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gtatttttatttaaaaaatga 29 ||||||||||||||||||||| Sbjct: 1095 gtatttttatttaaaaaatga 1115
>ref|XM_675045.1| Plasmodium berghei strain ANKA Pb-fam-4 protein (PB000584.01.0) partial mRNA Length = 2739 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gtatttttatttaaaaaatga 29 ||||||||||||||||||||| Sbjct: 1086 gtatttttatttaaaaaatga 1106
>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome Length = 1512977 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gtatttttatttaaaaaatga 29 ||||||||||||||||||||| Sbjct: 884045 gtatttttatttaaaaaatga 884025
>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome Length = 1516355 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gtatttttatttaaaaaatga 29 ||||||||||||||||||||| Sbjct: 904483 gtatttttatttaaaaaatga 904463
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 ggcggcgttctggagcgcgca 345 ||||||||||||||||||||| Sbjct: 2073040 ggcggcgttctggagcgcgca 2073020
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 608 ccaccaccgggaacaatgccctcctcgat 636 |||||||||||||||||||| || ||||| Sbjct: 29709 ccaccaccgggaacaatgccttcttcgat 29681
>emb|AL034556.4|PFMAL3P5 Plasmodium falciparum MAL3P5, complete sequence Length = 86826 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gtatttttatttaaaaaatga 29 ||||||||||||||||||||| Sbjct: 80356 gtatttttatttaaaaaatga 80376
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 tatccttgatcttctcgatca 455 ||||||||||||||||||||| Sbjct: 69531 tatccttgatcttctcgatca 69511
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome Length = 1010023 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 acctttttcactttcaattga 140 ||||||||||||||||||||| Sbjct: 146204 acctttttcactttcaattga 146184
>gb|AC154255.2| Mus musculus BAC clone RP24-202K20 from chromosome 13, complete sequence Length = 159755 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 tatttttatttaaaaaatgac 30 ||||||||||||||||||||| Sbjct: 102598 tatttttatttaaaaaatgac 102618
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 ggcggcgttctggagcgcgca 345 ||||||||||||||||||||| Sbjct: 1647447 ggcggcgttctggagcgcgca 1647427
>dbj|AK047518.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930082I23 product:unclassifiable, full insert sequence Length = 3307 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 548 tggtcttcaattgtttctttg 568 ||||||||||||||||||||| Sbjct: 2488 tggtcttcaattgtttctttg 2508
>gb|U21105.1|PSU21105 Pisum sativum alphacpn60 precursor (alphacpn60) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1977 Score = 42.1 bits (21), Expect = 2.5 Identities = 42/49 (85%) Strand = Plus / Minus Query: 269 ggcttgggcttctcgacgacgatcgcttgcgtggtgaggaccattccgg 317 ||||||||||| ||||||||||| || || ||||| | |||||| |||| Sbjct: 1751 ggcttgggcttttcgacgacgatggcctgtgtggttaagaccatcccgg 1703
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 319 caccgaggcggcgttctggagcgcg 343 |||||| |||||||||||||||||| Sbjct: 2700886 caccgacgcggcgttctggagcgcg 2700910
>emb|CT025569.14| Mouse DNA sequence from clone RP24-68J22 on chromosome 13, complete sequence Length = 230723 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 tatttttatttaaaaaatgac 30 ||||||||||||||||||||| Sbjct: 4875 tatttttatttaaaaaatgac 4855
>gb|AC115740.8| Mus musculus chromosome 3, clone RP23-476G18, complete sequence Length = 226125 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 548 tggtcttcaattgtttctttg 568 ||||||||||||||||||||| Sbjct: 150239 tggtcttcaattgtttctttg 150259
>dbj|AB039274.1| Propionibacterium granulosum hsp60 gene for 60 kDa heat shock protein, partial cds Length = 1688 Score = 42.1 bits (21), Expect = 2.5 Identities = 42/49 (85%) Strand = Plus / Minus Query: 323 gaggcggcgttctggagcgcgcatctcgtcaccttggcggggtcgatga 371 |||| ||||||||| || ||| | | |||||||||||| |||||||||| Sbjct: 1606 gaggaggcgttctgcagggcggaacgcgtcaccttggccgggtcgatga 1558
>ref|NM_125033.3| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.1 mRNA, complete cds Length = 2315 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 690 agctctgtctcagttgttgctccaacct 717 ||||||||||||||| ||||||||||| Sbjct: 1407 agctctgtctcagtttgtgctccaacct 1380
>ref|NM_001037006.1| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.2 mRNA, complete cds Length = 2355 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 690 agctctgtctcagttgttgctccaacct 717 ||||||||||||||| ||||||||||| Sbjct: 1447 agctctgtctcagtttgtgctccaacct 1420
>gb|AY780524.1| Ictalurus punctatus heat shock protein 60-like mRNA, partial sequence Length = 186 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 608 ccaccaccgggaacaatgccctcctcga 635 ||||| ||||||||||||||||| |||| Sbjct: 59 ccacctccgggaacaatgccctcttcga 32
>gb|AC137713.8| Mus musculus chromosome 15, clone RP24-468P6, complete sequence Length = 155341 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 agggacataggtagataggt 593 |||||||||||||||||||| Sbjct: 126402 agggacataggtagataggt 126383
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 atttttatttaaaaaatgac 30 |||||||||||||||||||| Sbjct: 2080997 atttttatttaaaaaatgac 2081016
>gb|AC129290.4| Mus musculus BAC clone RP24-489L4 from chromosome 6, complete sequence Length = 188132 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cctgaactgaagcatctaaa 185 |||||||||||||||||||| Sbjct: 123998 cctgaactgaagcatctaaa 124017
>ref|XM_846305.1| PREDICTED: Canis familiaris similar to leucyl/cystinyl aminopeptidase isoform 1 (LOC488896), mRNA Length = 3201 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 697 tctcagttgttgctccaaccttga 720 |||||||| ||||||||||||||| Sbjct: 2632 tctcagtttttgctccaaccttga 2609
>gb|AE014838.1| Plasmodium falciparum 3D7 chromosome 11 section 3 of 8 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tatttttatttaaaaaatga 29 |||||||||||||||||||| Sbjct: 179355 tatttttatttaaaaaatga 179374
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 caccgaggcggcgttctgga 338 |||||||||||||||||||| Sbjct: 344526 caccgaggcggcgttctgga 344545
>gb|AC105337.7| Homo sapiens chromosome 17, clone CTD-2116F7, complete sequence Length = 126083 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 cttgcaatgccttctgaatg 523 |||||||||||||||||||| Sbjct: 9004 cttgcaatgccttctgaatg 9023
>gb|AC117395.5| Homo sapiens 3 BAC RP11-651P23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172715 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 atttttatttaaaaaatgac 30 |||||||||||||||||||| Sbjct: 96337 atttttatttaaaaaatgac 96356
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 cggcttgggcttctcgacga 287 |||||||||||||||||||| Sbjct: 2275572 cggcttgggcttctcgacga 2275553
>emb|BX649634.8| Zebrafish DNA sequence from clone CH211-284G18 in linkage group 2, complete sequence Length = 154030 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gtatttttatttaaaaaatg 28 |||||||||||||||||||| Sbjct: 89401 gtatttttatttaaaaaatg 89382
>gb|AC079951.35| Homo sapiens 12q BAC RP11-346L11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191942 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ggtatttttatttaaaaaat 27 |||||||||||||||||||| Sbjct: 170493 ggtatttttatttaaaaaat 170474
>dbj|AK220921.1| Arabidopsis thaliana mRNA for RuBisCO subunit binding-protein beta subunit precursor, partial cds, clone: RAFL22-49-H21 Length = 766 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 690 agctctgtctcagttgttgctccaacct 717 ||||||||||||||| ||||||||||| Sbjct: 45 agctctgtctcagtttgtgctccaacct 18
>emb|BX832336.1|CNS09ZVE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 916 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 690 agctctgtctcagttgttgctccaacct 717 ||||||||||||||| ||||||||||| Sbjct: 268 agctctgtctcagtttgtgctccaacct 241
>emb|BX831822.1|CNS09YNB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH31ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1462 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 690 agctctgtctcagttgttgctccaacct 717 ||||||||||||||| ||||||||||| Sbjct: 801 agctctgtctcagtttgtgctccaacct 774
>gb|AY688374.2| Lates calcarifer parvalbumin beta-1 gene, complete cds Length = 2749 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 ttctgaatgatgtcagcacc 534 |||||||||||||||||||| Sbjct: 1748 ttctgaatgatgtcagcacc 1767
>gb|AC074375.7| Homo sapiens BAC clone RP11-729M8 from 2, complete sequence Length = 106896 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tatttttatttaaaaaatga 29 |||||||||||||||||||| Sbjct: 71337 tatttttatttaaaaaatga 71356
>gb|AC126177.8| Homo sapiens 12 BAC RP11-554D14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131209 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gtatttttatttaaaaaatg 28 |||||||||||||||||||| Sbjct: 81989 gtatttttatttaaaaaatg 82008
>gb|AC138405.6| Mus musculus chromosome 1, clone RP24-280N11, complete sequence Length = 151783 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttagccttcggcttgggctt 279 |||||||||||||||||||| Sbjct: 147389 ttagccttcggcttgggctt 147408
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 caccttggcggggtcgatga 371 |||||||||||||||||||| Sbjct: 8267338 caccttggcggggtcgatga 8267319
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 accttggcggggtcgatgacaccc 376 |||||| ||||||||||||||||| Sbjct: 639066 accttgacggggtcgatgacaccc 639043
>dbj|AB019234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKN22 Length = 27229 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 690 agctctgtctcagttgttgctccaacct 717 ||||||||||||||| ||||||||||| Sbjct: 1499 agctctgtctcagtttgtgctccaacct 1472
>emb|AJ338304.1|HSA338304 Homo sapiens genomic sequence surrounding NotI site, clone NR1-PA22RS Length = 717 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 gtggtcttcaattgtttctt 566 |||||||||||||||||||| Sbjct: 522 gtggtcttcaattgtttctt 541
>gb|AC147627.6| Mus musculus BAC clone RP24-382F19 from Y, complete sequence Length = 226237 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gaactgaagcatctaaaaaa 188 |||||||||||||||||||| Sbjct: 206536 gaactgaagcatctaaaaaa 206517
>gb|AF062920.1|AF062920 Thermus aquaticus DNA polymerase III (dnaE) gene, complete cds Length = 4526 Score = 40.1 bits (20), Expect = 9.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 323 gaggcggcgttctggagcgcgcatctcgtcaccttggcggggtc 366 |||||||||||||| || ||| | | ||||||||||||||||| Sbjct: 4104 gaggcggcgttctgcagggcggagcgggtcaccttggcggggtc 4147
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 cggcttgggcttctcgacga 287 |||||||||||||||||||| Sbjct: 2297918 cggcttgggcttctcgacga 2297899
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 gcggcgttctggagcgcgca 345 |||||||||||||||||||| Sbjct: 995302 gcggcgttctggagcgcgca 995321
>dbj|AK112971.1| Ciona intestinalis cDNA, clone:cicl030b08, full insert sequence Length = 1163 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tttttatttaaaaaatgacg 31 |||||||||||||||||||| Sbjct: 12 tttttatttaaaaaatgacg 31
>gb|AC173476.2| Mus musculus BAC clone RP24-335D7 from chromosome 12, complete sequence Length = 182245 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gaactgaagcatctaaaaaa 188 |||||||||||||||||||| Sbjct: 115349 gaactgaagcatctaaaaaa 115330
>gb|U57000.1|TVU57000 Trichomonas vaginalis chaperonin 60 (cpn60) mRNA, partial cds Length = 1678 Score = 40.1 bits (20), Expect = 9.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 607 accaccaccgggaacaatgccctcctcgatggcagc 642 ||||||||| | ||| ||||| |||||||||||||| Sbjct: 1252 accaccaccagcaacgatgccttcctcgatggcagc 1217
>emb|AL591762.13| Mouse DNA sequence from clone RP23-465I6 on chromosome 2, complete sequence Length = 137773 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 cttgcaatgccttctgaatg 523 |||||||||||||||||||| Sbjct: 109544 cttgcaatgccttctgaatg 109563 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,165,307 Number of Sequences: 3902068 Number of extensions: 6165307 Number of successful extensions: 147053 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 145931 Number of HSP's gapped (non-prelim): 1080 length of query: 725 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 702 effective length of database: 17,143,297,704 effective search space: 12034594988208 effective search space used: 12034594988208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
