>ref|XM_466987.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1102

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 gcgccttcctccacggtcagatccccggtg 191
           |||||||||||||| ||||| |||||||||
Sbjct: 927 gcgccttcctccaccgtcagctccccggtg 898

>gb|AC148817.3| Medicago truncatula chromosome 7 BAC clone mth2-22c10, complete
             sequence
          Length = 123020

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 254   cttcttggccagaattcttgtgtaag 279
             ||||||||| ||||||||||||||||
Sbjct: 26541 cttcttggctagaattcttgtgtaag 26566

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 162      gcgccttcctccacggtcagatccccggtg 191
                |||||||||||||| ||||| |||||||||
Sbjct: 25754805 gcgccttcctccaccgtcagctccccggtg 25754776

>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0010C01
          Length = 186185

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 162    gcgccttcctccacggtcagatccccggtg 191
              |||||||||||||| ||||| |||||||||
Sbjct: 157481 gcgccttcctccaccgtcagctccccggtg 157452

>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1112_G03
          Length = 106401

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 162  gcgccttcctccacggtcagatccccggtg 191
            |||||||||||||| ||||| |||||||||
Sbjct: 1411 gcgccttcctccaccgtcagctccccggtg 1382

>dbj|AK069956.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036L11, full
            insert sequence
          Length = 2747

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 162  gcgccttcctccacggtcagatccccggtg 191
            |||||||||||||| ||||| |||||||||
Sbjct: 2401 gcgccttcctccaccgtcagctccccggtg 2372

>dbj|AK061368.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-D09, full
           insert sequence
          Length = 1102

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 gcgccttcctccacggtcagatccccggtg 191
           |||||||||||||| ||||| |||||||||
Sbjct: 927 gcgccttcctccaccgtcagctccccggtg 898

>gb|AC125375.3| Mus musculus BAC clone RP23-464K21 from chromosome 14, complete
             sequence
          Length = 198193

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 66    tacaatggctacaggaaggat 86
             |||||||||||||||||||||
Sbjct: 24281 tacaatggctacaggaaggat 24301

>gb|AC125058.4| Mus musculus BAC clone RP23-400N6 from chromosome 14, complete sequence
          Length = 195696

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 66     tacaatggctacaggaaggat 86
              |||||||||||||||||||||
Sbjct: 184811 tacaatggctacaggaaggat 184831

>emb|AL596110.15| Mouse DNA sequence from clone RP23-330N10 on chromosome 11 Contains the
              3' end of a variant of the gene for a novel protein similar
              to human sperm antigen HCMOGT-1 (B230396K10Rik), the
              Adora2b gene for adenosine A2b receptor, the gene for a
              novel protein (2410012H22Rik), a somatic cytochrome c
              (Cycs) pseudogene, a novel gene, a novel pseudogene, the
              gene for a novel protein (2810460C24Rik), the 3' end of the
              Ncor1 gene for nuclear receptor co-repressor 1 and two CpG
              islands, complete sequence
          Length = 214834

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 307    aagctgagaaccctccaactg 327
              |||||||||||||||||||||
Sbjct: 136627 aagctgagaaccctccaactg 136607

>dbj|AK084321.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230023F13 product:unclassifiable, full
            insert sequence
          Length = 3083

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 307  aagctgagaaccctccaactg 327
            |||||||||||||||||||||
Sbjct: 1565 aagctgagaaccctccaactg 1585

>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold
          Length = 1819346

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 51     atagaacaagaaaaatacaat 71
              |||||||||||||||||||||
Sbjct: 558235 atagaacaagaaaaatacaat 558255

>emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 262797

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 355    tcttgaagtcctcgagaaact 375
              |||||||||||||||||||||
Sbjct: 131539 tcttgaagtcctcgagaaact 131559

>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    tggacaggttgtcgatgtcg 422
              ||||||||||||||||||||
Sbjct: 121116 tggacaggttgtcgatgtcg 121135

>gb|AY542985.1| Bigelowiella natans transcription factor BTF3 mRNA, complete cds
          Length = 837

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 7   tcttaagaaaatatattcgt 26
           ||||||||||||||||||||
Sbjct: 412 tcttaagaaaatatattcgt 431

>ref|XM_652937.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0425.2), mRNA
          Length = 2733

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 509 ggatagaagcagaggaagca 528
           ||||||||||||||||||||
Sbjct: 396 ggatagaagcagaggaagca 415

>ref|XM_534052.2| PREDICTED: Canis familiaris similar to SET binding factor 2
            (LOC476849), mRNA
          Length = 5439

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   catagaacaagaaaaataca 69
            ||||||||||||||||||||
Sbjct: 3573 catagaacaagaaaaataca 3592

>gb|AC098885.3| Mus musculus BAC clone RP23-122L17 from 5, complete sequence
          Length = 211112

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 198    ttgatgtctgtcttaacatatcca 221
              |||||||||||||| |||||||||
Sbjct: 188662 ttgatgtctgtcttgacatatcca 188639

>gb|DQ127563.1| Emiliania huxleyi virus 163 clone new49.seq partial sequence
          Length = 4132

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   gatgcttctactgtgccgtt 103
            ||||||||||||||||||||
Sbjct: 3709 gatgcttctactgtgccgtt 3690

>emb|AL592310.6| Human DNA sequence from clone RP4-566D2 on chromosome 1 Contains a novel
              pseudogene and the 3' end of a novel gene (MGC42493),
              complete sequence
          Length = 111140

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    attcttgtgtaagcattgat 286
              ||||||||||||||||||||
Sbjct: 105935 attcttgtgtaagcattgat 105916

>emb|BX511123.10| Zebrafish DNA sequence from clone DKEY-201I6 in linkage group 16,
              complete sequence
          Length = 159464

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 47     atccatagaacaagaaaaatacaa 70
              |||||||||| |||||||||||||
Sbjct: 121605 atccatagaaaaagaaaaatacaa 121582

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 331     atccatggtgatccagccgg 350
               ||||||||||||||||||||
Sbjct: 2575388 atccatggtgatccagccgg 2575369

>ref|XM_309181.2| Anopheles gambiae str. PEST ENSANGP00000018684 (ENSANGG00000016195),
            partial mRNA
          Length = 1481

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 401  cttggacaggttgtcgatgtcgtt 424
            ||||||||| ||||||||||||||
Sbjct: 1310 cttggacagcttgtcgatgtcgtt 1287

>gb|AF149805.1|AF149805 Methylococcus capsulatus cytochrome c' (ccp) gene, complete cds
          Length = 1033

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 331 atccatggtgatccagccgg 350
           ||||||||||||||||||||
Sbjct: 406 atccatggtgatccagccgg 425

>gb|AC100746.4| Mus musculus chromosome 5, clone RP24-399G21, complete sequence
          Length = 157682

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 198    ttgatgtctgtcttaacatatcca 221
              |||||||||||||| |||||||||
Sbjct: 121795 ttgatgtctgtcttgacatatcca 121818

>gb|AC149054.3| Mus musculus BAC clone RP23-443H21 from 18, complete sequence
          Length = 210613

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    atggctacaggaaggatgct 89
             ||||||||||||||||||||
Sbjct: 87669 atggctacaggaaggatgct 87650

>emb|AL845505.3| Mouse DNA sequence from clone RP23-115D12 on chromosome X, complete
             sequence
          Length = 122979

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 547   tggtgccgtggtagtttgttctta 570
             ||||||| ||||||||||||||||
Sbjct: 58960 tggtgccatggtagtttgttctta 58937


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,019,632
Number of Sequences: 3902068
Number of extensions: 6019632
Number of successful extensions: 106494
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106382
Number of HSP's gapped (non-prelim): 112
length of query: 723
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 700
effective length of database: 17,143,297,704
effective search space: 12000308392800
effective search space used: 12000308392800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)