| Clone Name | rbags14b23 |
|---|---|
| Clone Library Name | barley_pub |
>FTHS_PICTO (Q6KZM3) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 535 Score = 32.3 bits (72), Expect = 1.2 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = -2 Query: 297 DHMPMVFHT*PEPKFLHRTSAMLGRVPSFACFDSISTPFVGKADIG 160 +H+P + HT P H TS++LG + FD + T +D+G Sbjct: 246 EHVPAIIHTGPFGNIAHGTSSILGDIIGLKMFDYLVTEAGFGSDLG 291
>WRK63_ARATH (Q9C6H5) Probable WRKY transcription factor 63 (WRKY DNA-binding| protein 63) Length = 241 Score = 32.0 bits (71), Expect = 1.6 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Frame = +3 Query: 135 MAPLYPT-SNQYQLFPQKGLKYYRNKQ---KMERGLTWRKYGAK 254 MA L P S++ ++ KGL+ YR+ +++ G TWRKYG K Sbjct: 71 MAGLVPQRSSKKKICGVKGLEIYRDDSPNPRLDDGFTWRKYGQK 114
>WRK64_ARATH (Q9C557) Probable WRKY transcription factor 64 (WRKY DNA-binding| protein 64) Length = 249 Score = 31.2 bits (69), Expect = 2.7 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 12/66 (18%) Frame = +3 Query: 156 SNQYQLFPQKGLKYYRNKQKMER---GLTWRKYG---AKISAQVRC------GKPLACDL 299 S++ + + + L+YYR++ R G TWRKYG K S RC K C+ Sbjct: 79 SSKKKYYGAEDLEYYRDESPTPRPDDGFTWRKYGQKTIKTSPYQRCYYRCTYAKDQNCNA 138 Query: 300 AKRYWM 317 KR M Sbjct: 139 RKRVQM 144
>HOX7P_XENLA (P35993) Homeobox protein XHOX-7.1' (Fragment)| Length = 291 Score = 30.4 bits (67), Expect = 4.7 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +3 Query: 180 QKGLKYYR-NKQKMERGLTWRKYGAKISAQVRCGKPLACDLAK 305 QKGLK R N++ E G +W K G S R P +C L K Sbjct: 114 QKGLKPRRSNRKNSEDGTSWSKDGGSYSPPPRHLSPSSCTLRK 156
>FAT2_RAT (O88277) Protocadherin Fat 2 precursor (Multiple epidermal growth| factor-like domains 1) Length = 4351 Score = 30.0 bits (66), Expect = 6.1 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = -2 Query: 429 KCEVIKDITVGIKS*AGIAAEDIGNIALLMAMNYYVNTSSSALRDHMP 286 K V+ IT I AG+ ++++G NY +N S DH P Sbjct: 672 KTGVLTHITKTILQSAGLQSQELGEEEFTSLSNYQINHHSPQFEDHFP 719 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,294,910 Number of Sequences: 219361 Number of extensions: 1986915 Number of successful extensions: 4625 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4478 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4625 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)