>emb|AL662982.3|OSJN00184 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083I11,
              complete sequence
          Length = 149085

 Score =  188 bits (95), Expect = 2e-44
 Identities = 165/187 (88%), Gaps = 1/187 (0%)
 Strand = Plus / Minus

                                                                          
Query: 445    actgaacatttgcagacagcagtcagttcctaatgtacatgtcaatcactcgtcaacttt 504
              |||||||||||||||||| |||||||||||||||||||| |||| ||| || ||||||||
Sbjct: 125169 actgaacatttgcagaca-cagtcagttcctaatgtacaggtcagtcattcatcaacttt 125111

                                                                          
Query: 505    tgtcccgaacttctcagccaagaactcgtcaagaagaccataatttcgaacaggttctga 564
              |||||| ||||| ||||||||||| || |||||||||||||||||  ||| || ||||| 
Sbjct: 125110 tgtcccaaacttttcagccaagaaatcatcaagaagaccataattcggaatagcttctgc 125051

                                                                          
Query: 565    gctgaagttctgagcaggcaactttcgaatacatacaagaatatgttgaacatctcgaca 624
               |||||||||| |||||||||||| ||||| ||||||||||||||||| ||||| || ||
Sbjct: 125050 actgaagttctcagcaggcaacttccgaatgcatacaagaatatgttggacatcacggca 124991

                     
Query: 625    taatctg 631
               ||||||
Sbjct: 124990 caatctg 124984

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  188 bits (95), Expect = 2e-44
 Identities = 165/187 (88%), Gaps = 1/187 (0%)
 Strand = Plus / Minus

                                                                           
Query: 445     actgaacatttgcagacagcagtcagttcctaatgtacatgtcaatcactcgtcaacttt 504
               |||||||||||||||||| |||||||||||||||||||| |||| ||| || ||||||||
Sbjct: 7478816 actgaacatttgcagaca-cagtcagttcctaatgtacaggtcagtcattcatcaacttt 7478758

                                                                           
Query: 505     tgtcccgaacttctcagccaagaactcgtcaagaagaccataatttcgaacaggttctga 564
               |||||| ||||| ||||||||||| || |||||||||||||||||  ||| || ||||| 
Sbjct: 7478757 tgtcccaaacttttcagccaagaaatcatcaagaagaccataattcggaatagcttctgc 7478698

                                                                           
Query: 565     gctgaagttctgagcaggcaactttcgaatacatacaagaatatgttgaacatctcgaca 624
                |||||||||| |||||||||||| ||||| ||||||||||||||||| ||||| || ||
Sbjct: 7478697 actgaagttctcagcaggcaacttccgaatgcatacaagaatatgttggacatcacggca 7478638

                      
Query: 625     taatctg 631
                ||||||
Sbjct: 7478637 caatctg 7478631

>emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0021F22,
            complete sequence
          Length = 181498

 Score =  188 bits (95), Expect = 2e-44
 Identities = 165/187 (88%), Gaps = 1/187 (0%)
 Strand = Plus / Minus

                                                                        
Query: 445  actgaacatttgcagacagcagtcagttcctaatgtacatgtcaatcactcgtcaacttt 504
            |||||||||||||||||| |||||||||||||||||||| |||| ||| || ||||||||
Sbjct: 1289 actgaacatttgcagaca-cagtcagttcctaatgtacaggtcagtcattcatcaacttt 1231

                                                                        
Query: 505  tgtcccgaacttctcagccaagaactcgtcaagaagaccataatttcgaacaggttctga 564
            |||||| ||||| ||||||||||| || |||||||||||||||||  ||| || ||||| 
Sbjct: 1230 tgtcccaaacttttcagccaagaaatcatcaagaagaccataattcggaatagcttctgc 1171

                                                                        
Query: 565  gctgaagttctgagcaggcaactttcgaatacatacaagaatatgttgaacatctcgaca 624
             |||||||||| |||||||||||| ||||| ||||||||||||||||| ||||| || ||
Sbjct: 1170 actgaagttctcagcaggcaacttccgaatgcatacaagaatatgttggacatcacggca 1111

                   
Query: 625  taatctg 631
             ||||||
Sbjct: 1110 caatctg 1104

>gb|AY112431.1| Zea mays CL7452_1 mRNA sequence
          Length = 610

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 69/81 (85%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                       
Query: 440 ccaccactgaacatttgcagacagcagtcagttcctaatgtacatgtcaatcactcgtca 499
           |||||| |||||||||  |||||  ||||||||||||||||||| |||||||| ||  ||
Sbjct: 531 ccaccattgaacatttatagacatgagtcagttcctaatgtaca-gtcaatcattcacca 589

                                
Query: 500 acttttgtcccgaacttctca 520
           ||||| ||||| || ||||||
Sbjct: 590 actttcgtcccaaagttctca 610

>ref|XM_643956.1| Entamoeba histolytica HM-1:IMSS BspA-like leucine rich repeat protein
            (349.t00006) partial mRNA
          Length = 2535

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 591  gaatacatacaagaatatgttg 612
            ||||||||||||||||||||||
Sbjct: 2122 gaatacatacaagaatatgttg 2143

>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence
          Length = 93173

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 402   cagtgatgtctttgataactt 422
             |||||||||||||||||||||
Sbjct: 28871 cagtgatgtctttgataactt 28851

>emb|AL627088.7| Zebrafish DNA sequence from clone RP71-1D6 in linkage group 18 Contains
             a CpG island, complete sequence
          Length = 151446

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 418   aacttcacatttaccatatttacca 442
             ||||||| |||||||||||||||||
Sbjct: 72848 aacttcaaatttaccatatttacca 72872

>gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, complete sequence
          Length = 194548

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 416    ataacttcacatttaccatattta 439
              ||||||||| ||||||||||||||
Sbjct: 118442 ataacttcatatttaccatattta 118419

>gb|AC010124.6| Drosophila melanogaster clone BACR06O03, complete sequence
          Length = 193483

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 323   acgtagtaattcattgccat 342
             ||||||||||||||||||||
Sbjct: 52910 acgtagtaattcattgccat 52929

>gb|AC166167.2| Mus musculus BAC clone RP23-211D22 from chromosome 13, complete
             sequence
          Length = 200448

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    aagaatgggccgtgctgccg 111
             ||||||||||||||||||||
Sbjct: 29039 aagaatgggccgtgctgccg 29058

>gb|AY682793.1| Boophilus microplus R2 retrotransposon reverse transcriptase-like
           protein, partial cds; and nonfunctional 28S ribosomal
           RNA gene, partial sequence
          Length = 1855

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 517 ctcagccaagaactcgtcaa 536
           ||||||||||||||||||||
Sbjct: 43  ctcagccaagaactcgtcaa 24

>emb|CR388412.9| Zebrafish DNA sequence from clone CH211-69G13 in linkage group 5,
             complete sequence
          Length = 158289

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 378   tacctgcttaggattttatgccaa 401
             |||||||| |||||||||||||||
Sbjct: 63591 tacctgctgaggattttatgccaa 63568

>emb|CR394556.10| Zebrafish DNA sequence from clone DKEY-79P17 in linkage group 9,
             complete sequence
          Length = 136863

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   ccaacatctaaccaatatca 169
             ||||||||||||||||||||
Sbjct: 68434 ccaacatctaaccaatatca 68453

>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence
          Length = 223991

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 446    ctgaacatttgcagacagca 465
              ||||||||||||||||||||
Sbjct: 146450 ctgaacatttgcagacagca 146431

>gb|AC119242.5| Mus musculus chromosome 6, clone RP24-229C13, complete sequence
          Length = 189108

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 591   gaatacatacaagaatatgt 610
             ||||||||||||||||||||
Sbjct: 32950 gaatacatacaagaatatgt 32931

>gb|AC105950.11| Mus musculus chromosome 12, clone RP24-386J17, complete sequence
          Length = 192207

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 469    agttcctaatgtacatgtca 488
              ||||||||||||||||||||
Sbjct: 176631 agttcctaatgtacatgtca 176650

>gb|AC163993.3| Mus musculus chromosome 19, clone RP24-78O14, complete sequence
          Length = 177411

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 416   ataacttcacatttaccatattta 439
             ||||||||| ||||||||||||||
Sbjct: 85761 ataacttcatatttaccatattta 85784

>gb|AC159210.2| Mus musculus BAC clone RP23-54F9 from chromosome 13, complete sequence
          Length = 228429

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     aagaatgggccgtgctgccg 111
              ||||||||||||||||||||
Sbjct: 112372 aagaatgggccgtgctgccg 112353

>emb|CR385056.20| Wallaby DNA sequence from clone GRWB-43E9, complete sequence
          Length = 153276

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 507   tcccgaacttctcagccaagaact 530
             |||| |||||||||||||||||||
Sbjct: 63986 tccccaacttctcagccaagaact 63963

>ref|NM_141705.1| Drosophila melanogaster CG12419-RA (CG12419), mRNA
          Length = 396

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 323 acgtagtaattcattgccat 342
           ||||||||||||||||||||
Sbjct: 275 acgtagtaattcattgccat 256

>dbj|AK144138.1| Mus musculus kidney CCL-142 RAG cDNA, RIKEN full-length enriched
            library, clone:G430034I10 product:Hypothetical G-protein
            beta WD-40 repeats containing protein, full insert
            sequence
          Length = 3724

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 469  agttcctaatgtacatgtca 488
            ||||||||||||||||||||
Sbjct: 1556 agttcctaatgtacatgtca 1537

>gb|AC087821.5| Homo sapiens chromosome 8, clone RP11-108A14, complete sequence
          Length = 167949

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      acaggaacaagatacaatcg 28
              ||||||||||||||||||||
Sbjct: 119483 acaggaacaagatacaatcg 119464

>dbj|AK081777.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130076E09 product:unclassifiable, full
           insert sequence
          Length = 560

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 591 gaatacatacaagaatatgt 610
           ||||||||||||||||||||
Sbjct: 101 gaatacatacaagaatatgt 120

>dbj|AK052482.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched
            library, clone:D430033N04 product:hypothetical G-protein
            beta WD-40 repeats containing protein, full insert
            sequence
          Length = 3181

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 469  agttcctaatgtacatgtca 488
            ||||||||||||||||||||
Sbjct: 1520 agttcctaatgtacatgtca 1501

>gb|AC152959.2| Mus musculus 6 BAC RP23-78B5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 206857

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 591    gaatacatacaagaatatgt 610
              ||||||||||||||||||||
Sbjct: 172100 gaatacatacaagaatatgt 172081

>gb|AC005476.4|AC005476 Homo sapiens PAC clone RP1-261D10 from 14q24.3, complete sequence
          Length = 107731

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 123   caggttccttctatggctcctctatacc 150
             |||||||||||| |||||||||| ||||
Sbjct: 73780 caggttccttctgtggctcctctttacc 73753

>gb|AC009183.5|AC009183 Drosophila melanogaster, chromosome 3R, region 85F-85F, BAC clone
            BACR39F04, complete sequence
          Length = 192055

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 323  acgtagtaattcattgccat 342
            ||||||||||||||||||||
Sbjct: 3488 acgtagtaattcattgccat 3469

>gb|AC079988.6| Homo sapiens BAC clone RP11-795C1 from 2, complete sequence
          Length = 211305

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 433    atatttaccaccactgaaca 452
              ||||||||||||||||||||
Sbjct: 207064 atatttaccaccactgaaca 207083

>gb|AC104832.8| Mus Musculus Strain C57BL6/J Chromosome 12 BAC, RP23-38P6, complete
              sequence
          Length = 179216

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 469    agttcctaatgtacatgtca 488
              ||||||||||||||||||||
Sbjct: 108133 agttcctaatgtacatgtca 108152

>ref|XM_234706.3| PREDICTED: Rattus norvegicus similar to hypothetical protein FLJ10300
            (predicted) (LOC314523), mRNA
          Length = 3735

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 469  agttcctaatgtacatgtca 488
            ||||||||||||||||||||
Sbjct: 2131 agttcctaatgtacatgtca 2112

>gb|AC013399.6| Homo sapiens BAC clone RP11-69O6 from 2, complete sequence
          Length = 171812

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 433    atatttaccaccactgaaca 452
              ||||||||||||||||||||
Sbjct: 106767 atatttaccaccactgaaca 106786

>gb|AE003685.5| Drosophila melanogaster chromosome 3R, section 23 of 118 of the
             complete sequence
          Length = 241476

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   acgtagtaattcattgccat 342
             ||||||||||||||||||||
Sbjct: 62103 acgtagtaattcattgccat 62084

>emb|AL929120.7| Mouse DNA sequence from clone RP23-457H10 on chromosome 2, complete
             sequence
          Length = 178517

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aataacacactgcaccaaaa 75
             ||||||||||||||||||||
Sbjct: 55372 aataacacactgcaccaaaa 55353

>emb|AL589873.11| Mouse DNA sequence from clone RP23-120P1 on chromosome 2, complete
              sequence
          Length = 170936

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    atgtctgtcaggttccttct 134
              ||||||||||||||||||||
Sbjct: 152573 atgtctgtcaggttccttct 152554


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,416,836
Number of Sequences: 3902068
Number of extensions: 5416836
Number of successful extensions: 91218
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91127
Number of HSP's gapped (non-prelim): 88
length of query: 646
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 623
effective length of database: 17,143,297,704
effective search space: 10680274469592
effective search space used: 10680274469592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)