ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags13m17 |
|---|---|
| Clone Library Name | barley_pub |
>YHI0_YEAST (P38708) Putative prolyl-tRNA synthetase YHR020W (EC 6.1.1.15)| (Proline--tRNA ligase) (ProRS) Length = 688 Score = 144 bits (362), Expect = 3e-34 Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 13/183 (7%) Frame = -3 Query: 596 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIP 417 L + GIRA D +NY+PGWK+SQ+E+KG+P+RIE+GPKD+ QV +VRR++ K + Sbjct: 506 LKKVGIRAFGDYNDNYTPGWKFSQYELKGIPIRIELGPKDIEKNQVVVVRRNDSKKYVVS 565 Query: 416 STDLVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIAALNDKKLILAPWCDEEEV 237 +L ++ +L+ +Q +L + AK D VI++ W F+ ALN K +ILAPWC E Sbjct: 566 FDELEARIPEILEEMQGDLFKKAKELFDTHRVIVNEWSGFVPALNKKNVILAPWCGVMEC 625 Query: 236 EKDVKART-------------KGELGAAKTLCTPFDQPDLPSGTVCFASGKPAQKWSFWG 96 E+D+K + K AK+LC PFDQP L G C + A + +G Sbjct: 626 EEDIKESSAKKDDGEEFEEDDKAPSMGAKSLCIPFDQPVLNEGQKCIKCERIAVNYCMFG 685 Query: 95 RSY 87 RSY Sbjct: 686 RSY 688
>SYEP_DROME (P28668) Bifunctional aminoacyl-tRNA synthetase [Includes:| Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] Length = 1714 Score = 135 bits (339), Expect = 2e-31 Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 12/200 (6%) Frame = -3 Query: 650 KDADTXAIKGACESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLA 471 KD + + AC++ L G+R + D R+NYSPGWK++ WE+KGVPLR+E+GPKDL Sbjct: 1516 KDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKDLK 1575 Query: 470 NKQVRIVRRDNGAKVDIPSTDLVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIA 291 +Q+ VRRD K+ IP D+ +++ LL+ I ++L A+ + ++ W +F Sbjct: 1576 AQQLVAVRRDTVEKITIPLADVEKKIPALLETIHESMLNKAQEDMTSHTKKVTNWTDFCG 1635 Query: 290 ALNDKKLILAPWCDEEEVEKDVKART----KGELGA----AKTLCTPFDQP-DLPSGTVC 138 L K ++LAP+C E E +KA + + E GA AK+LC PFDQP + + C Sbjct: 1636 FLEQKNILLAPFCGEISCEDKIKADSARGEEAEPGAPAMGAKSLCIPFDQPAPIAASDKC 1695 Query: 137 F---ASGKPAQKWSFWGRSY 87 + KP + ++ +GRSY Sbjct: 1696 INPSCTNKP-KFYTLFGRSY 1714
>SYEP_MOUSE (Q8CGC7) Bifunctional aminoacyl-tRNA synthetase [Includes:| Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] Length = 1512 Score = 122 bits (307), Expect = 8e-28 Identities = 70/196 (35%), Positives = 107/196 (54%), Gaps = 9/196 (4%) Frame = -3 Query: 647 DADTXAIKGACESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLAN 468 + D A+ C L A IR +D R+NYSPGWK++ WE+KGVP+R+E+GP+D+ + Sbjct: 1317 EEDREALMAKCNEYRRRLLGANIRVRVDLRDNYSPGWKFNHWELKGVPVRLEVGPRDMKS 1376 Query: 467 KQVRIVRRDNGAKVDIPSTDLVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIAA 288 Q VRRD G K+ I + ++ +L+ IQ NL A +V+ +T ++F Sbjct: 1377 CQFVAVRRDTGEKLTIAEKEAEAKLEKVLEDIQLNLFTRASEDLKTHMVVSNTLEDFQKV 1436 Query: 287 LNDKKLILAPWCDEEEVEKDVKARTKG----ELGA----AKTLCTPFDQ-PDLPSGTVCF 135 L+ K+ P+C E + E +K T E GA AK+LC PF+ +L G +C Sbjct: 1437 LDAGKVAQIPFCGEIDCEDWIKKMTARDQDVEPGAPSMGAKSLCIPFNPLCELQPGAMCV 1496 Query: 134 ASGKPAQKWSFWGRSY 87 PA+ ++ +GRSY Sbjct: 1497 CGKNPAKFYTLFGRSY 1512
>SYEP_HUMAN (P07814) Bifunctional aminoacyl-tRNA synthetase [Includes:| Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] Length = 1440 Score = 122 bits (305), Expect = 1e-27 Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 9/196 (4%) Frame = -3 Query: 647 DADTXAIKGACESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLAN 468 + D A+ C L IR D R+NYSPGWK++ WE+KGVP+R+E+GP+D+ + Sbjct: 1245 EEDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKS 1304 Query: 467 KQVRIVRRDNGAKVDIPSTDLVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIAA 288 Q VRRD G K+ + + +++ +L+ IQ L A +V+ +T ++F Sbjct: 1305 CQFVAVRRDTGEKLTVAENEAETKLQAILEDIQVTLFTRASEDLKTHMVVANTMEDFQKI 1364 Query: 287 LNDKKLILAPWCDEEEVEKDVKARTKG----ELGA----AKTLCTPFDQ-PDLPSGTVCF 135 L+ K++ P+C E + E +K T E GA AK+LC PF +L G C Sbjct: 1365 LDSGKIVQIPFCGEIDCEDWIKKTTARDQDLEPGAPSMGAKSLCIPFKPLCELQPGAKCV 1424 Query: 134 ASGKPAQKWSFWGRSY 87 PA+ ++ +GRSY Sbjct: 1425 CGKNPAKYYTLFGRSY 1440
>SYP_CLOST (Q9L4Q8) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 481 Score = 115 bits (289), Expect = 1e-25 Identities = 68/176 (38%), Positives = 94/176 (53%), Gaps = 6/176 (3%) Frame = -3 Query: 596 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIP 417 L GIR LD NYSPGWK++Q+EMKGVPLR+EIGP+D+ N I RRD +K Sbjct: 318 LEAKGIRVTLDDDTNYSPGWKFNQYEMKGVPLRLEIGPRDIENNVAMIARRDTLSKDSYS 377 Query: 416 STDLVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIAALNDKKLILAP------W 255 ++ + V+ LLD + ++LE A+A RD+ ++EF +K+I P W Sbjct: 378 LDNIGDTVKNLLDTVHTDMLERARAHRDSKTFTFKDYEEF-----KRKMIETPGFAKGMW 432 Query: 254 CDEEEVEKDVKARTKGELGAAKTLCTPFDQPDLPSGTVCFASGKPAQKWSFWGRSY 87 C EEE E +K T C PF Q +L G C GKPA+ + ++Y Sbjct: 433 CGEEECEAKIKEDT-----GVTIRCIPFVQENL--GETCQFCGKPAKHMVYLAKAY 481
>SYP_MYCLE (Q9Z5I7) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 480 Score = 90.5 bits (223), Expect = 5e-18 Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 1/142 (0%) Frame = -3 Query: 596 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDL-ANKQVRIVRRDNGAKVDI 420 L AG+R +DAR +PGWKY++WE++GVP+R+E+GP+DL A V + R AK I Sbjct: 316 LQAAGVRTHVDARPQLTPGWKYNEWELRGVPIRLELGPRDLEAGTTVMVRRIGEKAKQPI 375 Query: 419 PSTDLVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIAALNDKKLILAPWCDEEE 240 ++ +L+ Q LLE A RD ++ WD F A LA C E Sbjct: 376 AIAAAPTELPGILEEFQRTLLERATQFRDDHTTLVDNWDAF-ATTVATGWALAIHCGNPE 434 Query: 239 VEKDVKARTKGELGAAKTLCTP 174 E+D+KA T AA C P Sbjct: 435 CEEDIKAET-----AATPRCVP 451
>SYPC_METJA (Q58635) Bifunctional aminoacyl-tRNA synthetase (ProCysRS)| (AATS-CysPro) [Includes: Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase); Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA ligase)] Length = 455 Score = 85.9 bits (211), Expect = 1e-16 Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 6/156 (3%) Frame = -3 Query: 653 FKDADTXAIKGACESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDL 474 FK + ++ A E +Y + R +D R+ PG K++ WE+KGVPLRIE+GPKD+ Sbjct: 288 FKGKEDIVMEKAKE--IYEKLKGKFRVHIDDRD-IRPGRKFNDWEIKGVPLRIEVGPKDI 344 Query: 473 ANKQVRIVRRDNGAKVDIPSTDLVEQVRVLLDGIQANLLETAKAKRDACIVIIS--TWDE 300 NK++ + RRD K + T L+E V L+ I N+ A K + I I+ DE Sbjct: 345 ENKKITLFRRDTMEKFQVDETQLMEVVEKTLNNIMENIKNRAWEKFENFITILEDINPDE 404 Query: 299 FIAALNDKK-LILAPWCDE---EEVEKDVKARTKGE 204 L++K+ +IL P+ +E EE+E+ V+A GE Sbjct: 405 IKNILSEKRGVILVPFKEEIYNEELEEKVEATILGE 440
>SYP_METTH (O26708) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 482 Score = 85.1 bits (209), Expect = 2e-16 Identities = 58/169 (34%), Positives = 83/169 (49%), Gaps = 1/169 (0%) Frame = -3 Query: 704 CCHQKVAXXXXXXXXXPFKDADTXAIKGACESAVYTLNQAGIRADLDARENYSPGWKYSQ 525 C VA FK A ++ AC L AG R LD R+ G KY + Sbjct: 287 CLPPDVAAHQVVIVPIIFKKAAEEVME-ACRELRSRLEAAGFRVHLDDRD-IRAGRKYYE 344 Query: 524 WEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPSTDLVEQVRVLLDGIQANLLETAK 345 WEM+GVPLR+EIGP+DL I RRD G KV + E +R L+ I NL A Sbjct: 345 WEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTADLQGIEETLRELMKDILENLRTRAW 404 Query: 344 AKRDACIVIISTWDEFIAALNDKKLILA-PWCDEEEVEKDVKARTKGEL 201 + ++ I T +E +++K+ I++ WC EEE DV+ + + ++ Sbjct: 405 ERMESEIREAETLEEASRIVDEKRGIISFMWCGEEECGMDVEEKVRVDI 453
>SYP_BORBU (O51363) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 488 Score = 69.3 bits (168), Expect = 1e-11 Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 10/186 (5%) Frame = -3 Query: 614 ESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNG 435 + V L +A R ++D SPG+++S E KG+P+R+E+G D+ V I RRD Sbjct: 309 DCVVDALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKD 368 Query: 434 A--KVDIPSTDLVEQVRVLLDGIQANLLETAKAKRDACIVII-----STWDEFIAALND- 279 K I L+ +V+V LD +Q +L + A R I +++ F A +ND Sbjct: 369 RKFKYQISLDSLISKVKVELDLMQKDLFQRALNFRILNTKEIFRSSKDSYETFKAYVNDY 428 Query: 278 KKLILAPWCDEEEVEKDVKARTKGELGAAKTLCTP--FDQPDLPSGTVCFASGKPAQKWS 105 +L+ WC E +K TK A C P F DL +G C A+ + Sbjct: 429 SGFVLSCWCGSLNCENIIKNETK-----ATIRCIPDDFKARDL-TGMTCIYCSSKAKYFV 482 Query: 104 FWGRSY 87 + +SY Sbjct: 483 LFAKSY 488
>SYP_ARCFU (O28664) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 575 Score = 52.8 bits (125), Expect = 1e-06 Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%) Frame = -3 Query: 632 AIKGACESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRI 453 A+ AC L R LD E+ PG KY +WE+KGVP+R EIGP+D A K V + Sbjct: 403 AVMEACRKLAEKLK--AFRVVLDEGED-RPGAKYYKWELKGVPIRFEIGPRD-AEKGVAV 458 Query: 452 VR-RDNGAKVDIPSTDLVEQVRVL 384 V RD K ++P D V++ +VL Sbjct: 459 VSFRDEKRKFEVP-LDEVDEGKVL 481
>SYP_ECOLI (P16659) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) (Global RNA synthesis factor) Length = 572 Score = 38.1 bits (87), Expect = 0.027 Identities = 24/77 (31%), Positives = 37/77 (48%) Frame = -3 Query: 629 IKGACESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIV 450 ++ E L GI LD R+ PG ++ E+ G+P I +G ++L N + Sbjct: 489 VQELAEKLYSELRAQGIEVLLDDRKE-RPGVMFADMELIGIPHTIVLGDRNLDNDDIEYK 547 Query: 449 RRDNGAKVDIPSTDLVE 399 R NG K I + D+VE Sbjct: 548 YRRNGEKQLIKTGDIVE 564
>SYT_CLOPE (Q8XI02) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 643 Score = 37.7 bits (86), Expect = 0.035 Identities = 20/71 (28%), Positives = 36/71 (50%) Frame = -3 Query: 605 VYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKV 426 V L + G+R + D R G+K + ++ P + +G K+ NK+V + R NG + Sbjct: 565 VEELRRRGVRVEADHRAE-KIGYKIREARLERTPYILVVGEKEAENKEVSVRSRKNGEEG 623 Query: 425 DIPSTDLVEQV 393 +P D V ++ Sbjct: 624 AMPLADFVNRI 634
>SYP_RICPR (Q9ZDE7) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 432 Score = 37.4 bits (85), Expect = 0.045 Identities = 21/61 (34%), Positives = 32/61 (52%) Frame = -3 Query: 572 DLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPSTDLVEQV 393 D DAR PG K++ ++ G P +I IGPK AN V + R G DI +++ + Sbjct: 371 DTDAR----PGSKFATHDLIGSPYQIIIGPKKAANNIVELKDRKTGVLEDIEVENIINYI 426 Query: 392 R 390 + Sbjct: 427 K 427
>SYT_IDILO (Q5QYN4) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 638 Score = 36.6 bits (83), Expect = 0.077 Identities = 23/71 (32%), Positives = 35/71 (49%) Frame = -3 Query: 605 VYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKV 426 V TLN+ GIRA D R N G+K + +K VP + +G K++ +V + R Sbjct: 559 VKTLNEKGIRASADLR-NEKIGFKIREHTLKRVPYLLVVGDKEVEAGEVAVRTRGGEDLG 617 Query: 425 DIPSTDLVEQV 393 P D + +V Sbjct: 618 KFPLEDFITRV 628
>SYT_SHEON (Q8EER9) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 642 Score = 35.8 bits (81), Expect = 0.13 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = -3 Query: 614 ESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRD 441 E V + GIRA D R N G+K + ++ VP + +G +++ NK+V + RD Sbjct: 556 EEVVKFFKEQGIRASFDLR-NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTRD 612
>SYP_MYCPN (P75382) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 483 Score = 35.8 bits (81), Expect = 0.13 Identities = 45/188 (23%), Positives = 76/188 (40%) Frame = -3 Query: 650 KDADTXAIKGACESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLA 471 K DT ++ A + L Q IR EN G + Q E+ G+P ++ + Sbjct: 310 KKGDTKTVELA-QKVQTLLEQLAIRFQFIKVENQL-GKQLGQGEVNGIPFQLIVDNPQTV 367 Query: 470 NKQVRIVRRDNGAKVDIPSTDLVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIA 291 N R+ R + ++ VE L+ + + AKA +V +T + Sbjct: 368 NIFNRLTRVKTAYSFEQLASRFVE----LVQQYHQAMYDKAKAVVQQKVVQATTLKQIEQ 423 Query: 290 ALNDKKLILAPWCDEEEVEKDVKARTKGELGAAKTLCTPFDQPDLPSGTVCFASGKPAQK 111 A NDKK +L + +E+ +K R + T+ +Q P +C SG+ AQ Sbjct: 424 AFNDKKAVLCAVRLTDTLEQQLKERYQ------VTVRCCLEQLQKPQ--ICPFSGESAQD 475 Query: 110 WSFWGRSY 87 + R+Y Sbjct: 476 YVLIARAY 483
>SYP_HAEIN (P43830) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 572 Score = 35.8 bits (81), Expect = 0.13 Identities = 23/77 (29%), Positives = 35/77 (45%) Frame = -3 Query: 632 AIKGACESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRI 453 A++ E TL G+ D R+ PG ++ E+ GVP + IG K+L N ++ Sbjct: 487 AVQKYAEELYRTLQSQGVDVIFDDRKE-RPGVMFADMELIGVPHMVVIGEKNLDNGEIEY 545 Query: 452 VRRDNGAKVDIPSTDLV 402 R G K I L+ Sbjct: 546 KNRRTGEKEMISKDKLL 562
>SYT_STAEQ (Q5HNM1) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 645 Score = 35.0 bits (79), Expect = 0.22 Identities = 15/48 (31%), Positives = 30/48 (62%) Frame = -3 Query: 596 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRI 453 L G+R ++D R N G+K + +MK +P +I +G +++ N++V + Sbjct: 569 LKSQGVRVEIDDR-NEKMGYKIREAQMKKIPYQIVVGDQEVENQEVNV 615
>SYH_PYRAB (Q9UY31) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 431 Score = 34.7 bits (78), Expect = 0.29 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Frame = -3 Query: 605 VYTLNQAGIRADLD-ARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAK 429 V L +AGIR+D++ + Y+ GV L I +G +DL V I ++G + Sbjct: 356 VTRLRKAGIRSDIELSGRKLRKALDYAN--RIGVRLSIIVGKRDLERGVVTIRDLESGNQ 413 Query: 428 VDIPSTDLVEQVRVLLD 378 V++P ++V +VR LL+ Sbjct: 414 VEVPVDNVVTKVRELLN 430
>SYH_MESAU (P07178) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 508 Score = 34.3 bits (77), Expect = 0.38 Identities = 23/80 (28%), Positives = 41/80 (51%) Frame = -3 Query: 629 IKGACESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIV 450 + G A L AGI+A+L ++N + E G+PL IG ++L + +++ Sbjct: 419 LAGGETKACLQLWDAGIKAELLYKKNPKLLNQLQYCEETGIPLVAIIGEQELKDGVIKLR 478 Query: 449 RRDNGAKVDIPSTDLVEQVR 390 + +VD+ DLVE++R Sbjct: 479 SVASREEVDVRREDLVEEIR 498
>SYH_MOUSE (Q61035) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 509 Score = 33.9 bits (76), Expect = 0.50 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = -3 Query: 605 VYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKV 426 V L AGI+A+L ++N + E G+PL IG ++L + +++ + +V Sbjct: 428 VSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVASREEV 487 Query: 425 DIPSTDLVEQVR 390 D+ DLVE++R Sbjct: 488 DVQREDLVEEIR 499
>SYP_ZYMMO (P75000) Putative prolyl-tRNA synthetase (EC 6.1.1.15)| (Proline--tRNA ligase) (ProRS) Length = 443 Score = 33.9 bits (76), Expect = 0.50 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = -3 Query: 641 DTXAIKGACESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQ 462 D + +S L AGI D R N G K++ ++ G+P ++ IGPK Sbjct: 355 DDENCRAIADSLYQRLEAAGIDTLYDDR-NERGGAKFATMDLIGLPWQVVIGPKGAEKGV 413 Query: 461 VRIVRRDNGAKVDI 420 V + R NG K I Sbjct: 414 VELKNRANGEKQTI 427
>SYT_FUSNN (Q8RFS6) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 620 Score = 33.5 bits (75), Expect = 0.65 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = -3 Query: 596 LNQAGIRADLDARENYSPGWKYSQWEMK-GVPLRIEIGPKDLANKQVRIVRRDNGAKVDI 420 L + GIRA+LD R N + G+K + K +P+++ IG ++ NK+V I R G+K Sbjct: 543 LEELGIRAELDDR-NETIGYKIREANGKYKIPMQLIIGKNEVENKEVNI--RRFGSK--- 596 Query: 419 PSTDLVEQVRVLLDGIQANLLETAKAKRD 333 +Q LLD +++ A K D Sbjct: 597 ------DQFSKLLDEFYTYVVDEATIKFD 619
>SYT_STRP1 (Q9A115) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 647 Score = 33.1 bits (74), Expect = 0.85 Identities = 26/90 (28%), Positives = 45/90 (50%) Frame = -3 Query: 599 TLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDI 420 TL G+RAD+D R N +K + +P ++ +G K++ +K V + R G+K Sbjct: 566 TLRDRGVRADVDDR-NEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNV--RRYGSK--- 619 Query: 419 PSTDLVEQVRVLLDGIQANLLETAKAKRDA 330 T E V ++ I A++ K++ DA Sbjct: 620 --TTHTESVEEFVENILADI--ARKSRPDA 645
>SYT_STAES (Q8CS74) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 645 Score = 33.1 bits (74), Expect = 0.85 Identities = 14/48 (29%), Positives = 30/48 (62%) Frame = -3 Query: 596 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRI 453 L G+R ++D R N G+K + +MK +P +I +G +++ +++V + Sbjct: 569 LKSQGVRVEIDDR-NEKMGYKIREAQMKKIPYQIVVGDQEVEHQEVNV 615
>SYH_PONPY (Q5R4R2) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 509 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/72 (29%), Positives = 39/72 (54%) Frame = -3 Query: 605 VYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKV 426 V L AGI+A+L ++N + E G+PL IG ++L + +++ + +V Sbjct: 428 VSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELEDGVIKLRSVTSREEV 487 Query: 425 DIPSTDLVEQVR 390 D+ DLVE+++ Sbjct: 488 DVRREDLVEEIK 499
>SYH_HUMAN (P12081) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 509 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/72 (29%), Positives = 39/72 (54%) Frame = -3 Query: 605 VYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKV 426 V L AGI+A+L ++N + E G+PL IG ++L + +++ + +V Sbjct: 428 VSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEV 487 Query: 425 DIPSTDLVEQVR 390 D+ DLVE+++ Sbjct: 488 DVRREDLVEEIK 499
>SYT_STRP8 (Q8P234) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 647 Score = 32.3 bits (72), Expect = 1.5 Identities = 19/69 (27%), Positives = 34/69 (49%) Frame = -3 Query: 599 TLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDI 420 TL G+RAD+D R N +K + +P ++ +G K++ +K V + R + A Sbjct: 566 TLRDRGVRADVDDR-NEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTE 624 Query: 419 PSTDLVEQV 393 + VE + Sbjct: 625 SVEEFVENI 633
>SYT_STRP6 (Q5XDC4) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 647 Score = 32.3 bits (72), Expect = 1.5 Identities = 19/69 (27%), Positives = 34/69 (49%) Frame = -3 Query: 599 TLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDI 420 TL G+RAD+D R N +K + +P ++ +G K++ +K V + R + A Sbjct: 566 TLRDRGVRADVDDR-NEKMQYKIRTSQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTE 624 Query: 419 PSTDLVEQV 393 + VE + Sbjct: 625 SVEEFVENI 633
>GLMS_GEOKA (Q5L3P0) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 599 Score = 32.3 bits (72), Expect = 1.5 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 15/146 (10%) Frame = -3 Query: 653 FKDADTXAIKGACESAVYTLNQAGIRADL----DARENYSPGWKYSQWEMKGVPLRIEIG 486 ++ D+ I ES V+ + G ADL D N + G +++W G P R+ Sbjct: 25 YRGYDSAGIAVLNESGVHVFKEKGRIADLRRIVDPNVNATVGIGHTRWATHGAPSRVNAH 84 Query: 485 PKDLAN-----------KQVRIVRRDNGAKVDIPSTDLVEQVRVLLDGIQANLLETAKAK 339 P A+ + +V+RD A V S E + L++ + L T +A Sbjct: 85 PHQSASGRFTLVHNGVIENYEMVKRDYLADVAFQSDTDTEVIVQLVEKFVRDGLTTEEAF 144 Query: 338 RDACIVIISTWDEFIAALNDKKLILA 261 R ++ ++ + D+ I A Sbjct: 145 RKTLSLLKGSYAIAMIDAQDENTIYA 170
>SYT_STRP3 (Q8K8C0) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 647 Score = 32.0 bits (71), Expect = 1.9 Identities = 19/69 (27%), Positives = 33/69 (47%) Frame = -3 Query: 599 TLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDI 420 TL G+RAD+D R N +K + +P ++ +G K++ K V + R + A Sbjct: 566 TLRDRGVRADVDDR-NEKMQYKIRASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTE 624 Query: 419 PSTDLVEQV 393 + VE + Sbjct: 625 SVEEFVENI 633
>UNC52_CAEEL (Q06561) Basement membrane proteoglycan precursor (Perlecan homolog)| (Uncoordinated protein 52) Length = 3375 Score = 31.6 bits (70), Expect = 2.5 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 16/124 (12%) Frame = -3 Query: 491 IGPKDLANKQVRIVRRDNGAKVDIPSTDLVEQVRVLLDGIQAN-----LLETAKAKRDAC 327 IG + Q + ++ G D+PS VEQ ++L + + E K + Sbjct: 2468 IGKTETKPNQSVVWTKEEG---DLPSGSRVEQGVLMLPSVHRDDEGSYTCEIVKEENPVF 2524 Query: 326 IVIISTWDEFIAALNDKKLILAPWCDEEEVEKDVK-----ARTKG------ELGAAKTLC 180 + D+FI ++ + + L P DEE V D++ A KG + + L Sbjct: 2525 STVDLQIDDFIPVIDGEPIELPPLSDEEIVNLDIEITLNTANPKGIIFETKRINSGDLLA 2584 Query: 179 TPFD 168 TP+D Sbjct: 2585 TPYD 2588
>SYT_RHOPA (Q6N4D3) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 658 Score = 31.6 bits (70), Expect = 2.5 Identities = 17/65 (26%), Positives = 34/65 (52%) Frame = -3 Query: 596 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIP 417 L +AG+RAD+D R N +K + + VP + +G K+ + V + R + + +P Sbjct: 576 LRKAGLRADIDLR-NEKINFKVREHSLAKVPALLVVGKKEAESHSVSVRRLGSDGQKVMP 634 Query: 416 STDLV 402 + + + Sbjct: 635 TDEAI 639
>SYH_FUGRU (P70076) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 519 Score = 31.2 bits (69), Expect = 3.2 Identities = 18/66 (27%), Positives = 35/66 (53%) Frame = -3 Query: 587 AGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPSTD 408 AGI+A+L +++ + E G+PL +G ++L N V++ +VDI D Sbjct: 449 AGIKAELMYKKSPKLLSQLQHCEESGIPLVAILGEQELKNGVVKLRNVATRDEVDISRAD 508 Query: 407 LVEQVR 390 L+ +++ Sbjct: 509 LIAEIK 514
>TPR_HUMAN (P12270) Nucleoprotein TPR| Length = 2349 Score = 31.2 bits (69), Expect = 3.2 Identities = 16/33 (48%), Positives = 23/33 (69%) Frame = -3 Query: 479 DLANKQVRIVRRDNGAKVDIPSTDLVEQVRVLL 381 D ANKQ ++ RDN +++I DL +Q+RVLL Sbjct: 473 DKANKQSSVLERDN-RRMEIQVKDLSQQIRVLL 504
>DPOM_AGABT (P30322) Probable DNA polymerase (EC 2.7.7.7) (Fragment)| Length = 797 Score = 30.8 bits (68), Expect = 4.2 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -3 Query: 341 KRDACIVIISTWDEFIAALNDKKLILAPWCDEEEVEKDVKARTKGE 204 KR C+ TWD+ + N K WCDE E + R+ GE Sbjct: 72 KRVVCLADNKTWDQSLKYWNSSKYPYPRWCDEYLTESEF-VRSIGE 116
>SYT2_BACSU (P18256) Threonyl-tRNA synthetase 2 (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 638 Score = 30.8 bits (68), Expect = 4.2 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%) Frame = -3 Query: 617 CESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDN 438 C L QAGIRA +D R N G+K + +++ +P + +G + V + R + Sbjct: 556 CRKVQAELKQAGIRAGIDER-NEKLGYKIRESQVQKIPYVLVLGDHEEQENAVNVRRFGH 614 Query: 437 GAKVDIP----STDLVEQV 393 +P LV+QV Sbjct: 615 QQNEHVPFQTFKDKLVKQV 633
>CACB1_HUMAN (Q02641) Voltage-dependent L-type calcium channel beta-1 subunit| (CAB1) (Calcium channel, voltage-dependent, beta 1 subunit) Length = 598 Score = 25.0 bits (53), Expect(2) = 7.0 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +1 Query: 436 PLSRRTMRTCLFARSFGPISILKGTPFIS 522 PL RTM T A S P+S L+G P+++ Sbjct: 422 PLLNRTMATAALAASPAPVSNLQG-PYLA 449 Score = 23.5 bits (49), Expect(2) = 7.0 Identities = 7/19 (36%), Positives = 13/19 (68%) Frame = +2 Query: 521 PIENISNQESSFHEHPNQL 577 P+E + + +S HE+P +L Sbjct: 454 PLERATGEHASMHEYPGEL 472
>GNT1_GIBZE (Q4HVS2) Glucose N-acetyltransferase 1 (EC 2.4.1.-)| (N-acetylglucosaminyltransferase) Length = 431 Score = 30.0 bits (66), Expect = 7.2 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 3/75 (4%) Frame = -3 Query: 308 WDEFIAALNDKKLILAPWCDEEEVEKDVKARTKGELGAAKTLCTPFDQPDLPSGT---VC 138 WD +A K + + W + DV+ R +QPD P VC Sbjct: 369 WDSSVALSEAKFVHFSDWPVPKPWINDVETRLA-------------NQPDCPEDNKKRVC 415 Query: 137 FASGKPAQKWSFWGR 93 + GK QKW W R Sbjct: 416 ESVGKTGQKWIHWRR 430
>LOLA_SHEON (Q8EER2) Outer-membrane lipoprotein carrier protein precursor| Length = 206 Score = 30.0 bits (66), Expect = 7.2 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +3 Query: 258 WSQDQLFVIESCYEFIPSANDYNAGISLCFRCFQQVCLN 374 WSQ + + CYE P A D AGIS CF + LN Sbjct: 122 WSQYAVTKKQDCYEIKPKATD--AGISAVNVCFNKGTLN 158
>SYT_ACIAD (Q6F860) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 640 Score = 30.0 bits (66), Expect = 7.2 Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%) Frame = -3 Query: 620 ACESAVYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRD 441 AC+ V L + G+RA D R N G+K + ++ +P + +G +++ V + R Sbjct: 553 ACQQVVAKLKENGLRAISDLR-NEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRS 611 Query: 440 N--------GAKVDIPSTDLVEQVRVLLD 378 A VD+ + + E+ R +++ Sbjct: 612 GKNLGTMSIDAFVDLVKSAVAERGRYIVE 640 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 107,613,688 Number of Sequences: 219361 Number of extensions: 2295140 Number of successful extensions: 7140 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 6842 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7129 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7139613222 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
