ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BMPR2_MOUSE (O35607) Bone morphogenetic protein receptor type-2 ... 29 2.4
2BMPR2_HUMAN (Q13873) Bone morphogenetic protein receptor type-2 ... 29 2.4
3FRP1_SCHPO (Q04800) Ferric reductase transmembrane component (EC... 28 4.2

>BMPR2_MOUSE (O35607) Bone morphogenetic protein receptor type-2 precursor (EC|
           2.7.11.30) (Bone morphogenetic protein receptor type II)
           (BMP type II receptor) (BMPR-II) (BRK-3)
          Length = 1038

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 172 KRTDAWKTSSTXILQRKASNE*CFDQD-EATLTA 270
           K  +AWK +S  +   K + E C+DQD EA LTA
Sbjct: 461 KFPEAWKENSLAVRSLKETIEDCWDQDAEARLTA 494



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>BMPR2_HUMAN (Q13873) Bone morphogenetic protein receptor type-2 precursor (EC|
           2.7.11.30) (Bone morphogenetic protein receptor type II)
           (BMP type II receptor) (BMPR-II)
          Length = 1038

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 172 KRTDAWKTSSTXILQRKASNE*CFDQD-EATLTA 270
           K  +AWK +S  +   K + E C+DQD EA LTA
Sbjct: 461 KFPEAWKENSLAVRSLKETIEDCWDQDAEARLTA 494



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>FRP1_SCHPO (Q04800) Ferric reductase transmembrane component (EC 1.16.1.7)|
           (Ferric-chelate reductase)
          Length = 564

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = -2

Query: 262 VWLHLDQSIIHLKLCVAVFXWTK 194
           +WLH  + ++++K+CVAV+ + +
Sbjct: 236 IWLHHRRCVVYMKVCVAVYVFDR 258


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,883,507
Number of Sequences: 219361
Number of extensions: 546376
Number of successful extensions: 788
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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