ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478653.1| Oryza sativa (japonica cultivar-group), mRNA 111 2e-21
2dbj|AK109507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
3ref|XM_478654.1| Oryza sativa (japonica cultivar-group), mRNA 98 3e-17
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
5dbj|AK060720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
6dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
7gb|AY104756.1| Zea mays PCO067622 mRNA sequence 78 3e-11
8gb|BT016476.1| Zea mays clone Contig309 mRNA sequence 64 5e-07
9gb|AC169511.1| Mus musculus BAC clone RP23-81P24 from chromosome... 46 0.11
10gb|BT017743.1| Zea mays clone EL01N0449E08.c mRNA sequence 46 0.11
11gb|AY104155.1| Zea mays PCO077380 mRNA sequence 46 0.11
12gb|AC118610.9| Mus musculus chromosome 6, clone RP23-178I17, com... 44 0.44
13gb|AC121356.10| Mus musculus chromosome 6, clone RP23-52D17, com... 44 0.44
14gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
15gb|AC140437.3| Mus musculus BAC clone RP23-88N2 from chromosome ... 42 1.8
16dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
17gb|AC175664.2| Mus musculus BAC clone RP24-391A3 from chromosome... 42 1.8
18dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
19dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
20gb|AY692264.1| Bacteriophage T5 strain st0 deletion mutant, comp... 40 6.9
21gb|AC112361.5| Rattus norvegicus 9 BAC CH230-61F12 (Children's H... 40 6.9
22gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, compl... 40 6.9
23gb|AY543070.1| Bacteriophage T5, complete genome 40 6.9
24ref|XM_536036.2| PREDICTED: Canis familiaris similar to WD-repea... 40 6.9
25ref|XM_854196.1| PREDICTED: Canis familiaris similar to WD-repea... 40 6.9
26gb|AC146118.3| Pan troglodytes BAC clone RP43-23A6 from 7, compl... 40 6.9
27emb|CR762443.6| Zebrafish DNA sequence from clone DKEY-3A5 in li... 40 6.9
28gb|AY456016.1| Cochliobolus heterostrophus putative histidine ki... 40 6.9
29gb|AC004837.1| Homo sapiens PAC clone RP4-570D2 from 7, complete... 40 6.9
30gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete s... 40 6.9
31emb|AL139375.18| Human DNA sequence from clone RP11-138N13 on ch... 40 6.9
32gb|AC163282.3| Mus musculus BAC clone RP23-454I20 from chromosom... 40 6.9
33gb|AC128710.2| Homo sapiens 3 BAC RP11-307C21 (Roswell Park Canc... 40 6.9
34dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 6.9
35gb|AC009562.9| Homo sapiens chromosome 15, clone RP11-348B17, co... 40 6.9
36gb|AY587007.1| Bacteriophage T5 strain ATCC 11303-B5, complete g... 40 6.9
37gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 6.9
38emb|CT030161.10| Mouse DNA sequence from clone RP23-235H10 on ch... 40 6.9
39gb|AC134594.5| Mus musculus BAC clone RP23-388B6 from 12, comple... 40 6.9 
>ref|XM_478653.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1352

 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                       
Query: 309 atcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcacag 368
           ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 911 atcaagtatccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcacag 852

                           
Query: 369 ggtggagcacgtcctc 384
           |||| ||||| |||||
Sbjct: 851 ggtgcagcacttcctc 836



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 422 ccgccctctgctacagcatcatcaggggtacgcaccaccaccacggggcaaatacagtgg 481
           |||||||| || ||| |||| || |||  ||||||||||||||||||||| | |||||||
Sbjct: 801 ccgccctccgccacaccatcgtcggggaaacgcaccaccaccacggggcacacacagtgg 742

                            
Query: 482 tggacgcagtaatcgct 498
           || ||||||||||||||
Sbjct: 741 tgcacgcagtaatcgct 725



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 236 tagcactcagccaacagtcgaatgctaggacctttacatgctggatccaacaggacat 293
           |||||| |||| |||||| || |||||| |||||||||||||||||| || |||||||
Sbjct: 983 tagcacccagcaaacagttgactgctagaacctttacatgctggatcaaagaggacat 926
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>dbj|AK109507.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E04, full
           insert sequence
          Length = 1351

 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                       
Query: 309 atcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcacag 368
           ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 911 atcaagtatccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcacag 852

                           
Query: 369 ggtggagcacgtcctc 384
           |||| ||||| |||||
Sbjct: 851 ggtgcagcacttcctc 836



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 422 ccgccctctgctacagcatcatcaggggtacgcaccaccaccacggggcaaatacagtgg 481
           |||||||| || ||| |||| || |||  ||||||||||||||||||||| | |||||||
Sbjct: 801 ccgccctccgccacaccatcgtcggggaaacgcaccaccaccacggggcacacacagtgg 742

                            
Query: 482 tggacgcagtaatcgct 498
           || ||||||||||||||
Sbjct: 741 tgcacgcagtaatcgct 725



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 236 tagcactcagccaacagtcgaatgctaggacctttacatgctggatccaacaggacat 293
           |||||| |||| |||||| || |||||| |||||||||||||||||| || |||||||
Sbjct: 983 tagcacccagcaaacagttgactgctagaacctttacatgctggatcaaagaggacat 926
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>ref|XM_478654.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1330

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                       
Query: 308 aatcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcaca 367
           |||||| || |||| ||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 867 aatcaattacccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcaca 808

                            
Query: 368 gggtggagcacgtcctc 384
           ||||| ||||| |||||
Sbjct: 807 gggtgcagcacttcctc 791



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 422 ccgccctctgctacagcatcatcaggggtacgcaccaccaccacggggcaaatacagtgg 481
           |||||||| || ||| |||| || |||  ||||||||||||||||||||| | |||||||
Sbjct: 756 ccgccctccgccacaccatcgtcggggaaacgcaccaccaccacggggcacacacagtgg 697

                            
Query: 482 tggacgcagtaatcgct 498
           || ||||||||||||||
Sbjct: 696 tgcacgcagtaatcgct 680
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                            
Query: 308      aatcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcaca 367
                |||||| || |||| ||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 21844121 aatcaattacccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcaca 21844180

                                 
Query: 368      gggtggagcacgtcctc 384
                ||||| ||||| |||||
Sbjct: 21844181 gggtgcagcacttcctc 21844197



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                            
Query: 422      ccgccctctgctacagcatcatcaggggtacgcaccaccaccacggggcaaatacagtgg 481
                |||||||| || ||| |||| || |||  ||||||||||||||||||||| | |||||||
Sbjct: 21844232 ccgccctccgccacaccatcgtcggggaaacgcaccaccaccacggggcacacacagtgg 21844291

                                 
Query: 482      tggacgcagtaatcgct 498
                || ||||||||||||||
Sbjct: 21844292 tgcacgcagtaatcgct 21844308



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                           
Query: 236      tagcactcagccaacagtcgaatgctaggacctttacatgctg 278
                |||||| |||| |||||| || |||||| ||||||||||||||
Sbjct: 21841655 tagcacccagcaaacagttgactgctagaacctttacatgctg 21841697
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>dbj|AK060720.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F04, full
           insert sequence
          Length = 1330

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                       
Query: 308 aatcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcaca 367
           |||||| || |||| ||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 867 aatcaattacccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcaca 808

                            
Query: 368 gggtggagcacgtcctc 384
           ||||| ||||| |||||
Sbjct: 807 gggtgcagcacttcctc 791



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 422 ccgccctctgctacagcatcatcaggggtacgcaccaccaccacggggcaaatacagtgg 481
           |||||||| || ||| |||| || |||  ||||||||||||||||||||| | |||||||
Sbjct: 756 ccgccctccgccacaccatcgtcggggaaacgcaccaccaccacggggcacacacagtgg 697

                            
Query: 482 tggacgcagtaatcgct 498
           || ||||||||||||||
Sbjct: 696 tgcacgcagtaatcgct 680
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>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041B22
          Length = 142446

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                         
Query: 308   aatcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcaca 367
             |||||| || |||| ||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 57797 aatcaattacccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcaca 57856

                              
Query: 368   gggtggagcacgtcctc 384
             ||||| ||||| |||||
Sbjct: 57857 gggtgcagcacttcctc 57873



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                         
Query: 422   ccgccctctgctacagcatcatcaggggtacgcaccaccaccacggggcaaatacagtgg 481
             |||||||| || ||| |||| || |||  ||||||||||||||||||||| | |||||||
Sbjct: 57908 ccgccctccgccacaccatcgtcggggaaacgcaccaccaccacggggcacacacagtgg 57967

                              
Query: 482   tggacgcagtaatcgct 498
             || ||||||||||||||
Sbjct: 57968 tgcacgcagtaatcgct 57984



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 236   tagcactcagccaacagtcgaatgctaggacctttacatgctg 278
             |||||| |||| |||||| || |||||| ||||||||||||||
Sbjct: 55331 tagcacccagcaaacagttgactgctagaacctttacatgctg 55373
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>gb|AY104756.1| Zea mays PCO067622 mRNA sequence
          Length = 637

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 310 tcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcacagg 369
           ||||| |||||| |||||||| || ||||||||||||||| | || ||||| ||||| ||
Sbjct: 420 tcaagcatccttgtgctcctccgcagcgtcatggtactcgccttcttcctccggcacggg 361

                                      
Query: 370 gtggagcacgtcctctgcaccaaccgc 396
           ||| ||||| ||||| |||||||||||
Sbjct: 360 gtgcagcacatcctcagcaccaaccgc 334



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 236 tagcactcagccaacagtcgaatgctaggacctttacatgctggatccaacaggac 291
           |||||| ||||||||||||||||||||| |||| ||||||||| |||||| |||||
Sbjct: 496 tagcacccagccaacagtcgaatgctagaacctctacatgctgaatccaagaggac 441



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 452 cgcaccaccaccacggggcaaatacagtggtggacgcagta 492
           ||||||||||| |||||||| | ||||||||| ||||||||
Sbjct: 281 cgcaccaccacaacggggcagacacagtggtgcacgcagta 241
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>gb|BT016476.1| Zea mays clone Contig309 mRNA sequence
          Length = 1258

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 236 tagcactcagccaacagtcgaatgctaggacctttacatgctggatccaacaggac 291
           |||||| ||||||||||||||||||||  |||| ||||||||| |||||| |||||
Sbjct: 261 tagcacccagccaacagtcgaatgctaaaacctctacatgctgaatccaagaggac 316



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                       
Query: 311 caagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcacaggg 370
           |||| |||||| |||||||| || ||||||||||||||| | || ||||| ||||| |||
Sbjct: 338 caagcatccttgtgctcctccgcagcgtcatggtactcgccttcttcctccggcacgggg 397

                                     
Query: 371 tggagcacgtcctctgcaccaaccgc 396
            | || || ||||| |||||||||||
Sbjct: 398 ggcagaacatcctcagcaccaaccgc 423



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 452 cgcaccaccaccacggggcaaatacagtggtggacgcagtaatcgct 498
           ||||||||||| |||||||| | ||||||||| |||||||| |||||
Sbjct: 476 cgcaccaccacaacggggcagacacagtggtgcacgcagtagtcgct 522
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>gb|AC169511.1| Mus musculus BAC clone RP23-81P24 from chromosome 14, complete sequence
          Length = 252587

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 112   atccaataagcacaaaagttcta 134
             |||||||||||||||||||||||
Sbjct: 66495 atccaataagcacaaaagttcta 66473
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>gb|BT017743.1| Zea mays clone EL01N0449E08.c mRNA sequence
          Length = 1322

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 435 cagcatcatcaggggtacgcaccaccaccacggggcaaatacagtggtggacgcagtaat 494
           ||||||||||||||   || || ||||| || ||||| | ||||||||| ||||||||||
Sbjct: 827 cagcatcatcagggtagcgaacaaccacaacagggcatacacagtggtgtacgcagtaat 768

                      
Query: 495 cgctcacactc 505
           | || ||||||
Sbjct: 767 cactaacactc 757
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>gb|AY104155.1| Zea mays PCO077380 mRNA sequence
          Length = 1011

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 435 cagcatcatcaggggtacgcaccaccaccacggggcaaatacagtggtggacgcagtaat 494
           ||||||||||||||   || || ||||| |||||||| | ||||||||| || |||||||
Sbjct: 450 cagcatcatcagggtagcgaacaaccacaacggggcatacacagtggtgtacacagtaat 391

                      
Query: 495 cgctcacactc 505
           | || ||||||
Sbjct: 390 cactaacactc 380
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>gb|AC118610.9| Mus musculus chromosome 6, clone RP23-178I17, complete sequence
          Length = 255673

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 292    attgatgcatggatccaatcaa 313
              ||||||||||||||||||||||
Sbjct: 225438 attgatgcatggatccaatcaa 225417
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>gb|AC121356.10| Mus musculus chromosome 6, clone RP23-52D17, complete sequence
          Length = 178055

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 292    attgatgcatggatccaatcaa 313
              ||||||||||||||||||||||
Sbjct: 169507 attgatgcatggatccaatcaa 169528
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>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017K09, complete sequence
          Length = 155525

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                         
Query: 438   catcatcaggggtacgcaccaccaccacggggcaaatacagtggtggacgcagtaatcgc 497
             |||||||||||   ||||| ||||| |||||||| |  |||||||| |||||||| ||||
Sbjct: 66009 catcatcagggtagcgcacgaccacgacggggcagacgcagtggtgcacgcagtagtcgc 65950

              
Query: 498   t 498
             |
Sbjct: 65949 t 65949
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>gb|AC140437.3| Mus musculus BAC clone RP23-88N2 from chromosome 8, complete sequence
          Length = 171402

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 167    gaagcacagatagacataaaacagtaaaa 195
              |||||||||||| ||||||||||| ||||
Sbjct: 168468 gaagcacagatacacataaaacagaaaaa 168496
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 288     ggacattgatgcatggatcca 308
               |||||||||||||||||||||
Sbjct: 7643376 ggacattgatgcatggatcca 7643356
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>gb|AC175664.2| Mus musculus BAC clone RP24-391A3 from chromosome 8, complete sequence
          Length = 168189

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 167    gaagcacagatagacataaaacagtaaaa 195
              |||||||||||| ||||||||||| ||||
Sbjct: 135611 gaagcacagatacacataaaacagaaaaa 135583
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>dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0494D11
          Length = 149198

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 288   ggacattgatgcatggatcca 308
             |||||||||||||||||||||
Sbjct: 68571 ggacattgatgcatggatcca 68551
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>dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C02, full
           insert sequence
          Length = 1118

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 438 catcatcaggggtacgcaccaccaccacggggcaaatacagtggtggacgcagtaatcgc 497
           |||||||||||   ||||| ||||| |||||||| |  |||||||| |||||||| ||||
Sbjct: 793 catcatcagggtagcgcacgaccacgacggggcagacgcagtggtgcacgcagtagtcgc 734

            
Query: 498 t 498
           |
Sbjct: 733 t 733
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>gb|AY692264.1| Bacteriophage T5 strain st0 deletion mutant, complete genome
          Length = 113238

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   tctgctacagcatcatcagg 447
             ||||||||||||||||||||
Sbjct: 55473 tctgctacagcatcatcagg 55454
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>gb|AC112361.5| Rattus norvegicus 9 BAC CH230-61F12 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 216648

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 494    tcgctcacactctctctctc 513
              ||||||||||||||||||||
Sbjct: 117364 tcgctcacactctctctctc 117383
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>gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, complete sequence
          Length = 209838

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 223    agaaaccccgaggtagcactcagc 246
              |||||||||||| |||||||||||
Sbjct: 148229 agaaaccccgagttagcactcagc 148252
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>gb|AY543070.1| Bacteriophage T5, complete genome
          Length = 121750

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   tctgctacagcatcatcagg 447
             ||||||||||||||||||||
Sbjct: 63528 tctgctacagcatcatcagg 63509
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>ref|XM_536036.2| PREDICTED: Canis familiaris similar to WD-repeat protein 12 (YTM1
           homolog), transcript variant 1 (LOC478876), mRNA
          Length = 1359

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 tggaagcacagatagacata 184
           ||||||||||||||||||||
Sbjct: 703 tggaagcacagatagacata 722
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>ref|XM_854196.1| PREDICTED: Canis familiaris similar to WD-repeat protein 12 (YTM1
           homolog), transcript variant 3 (LOC478876), mRNA
          Length = 1035

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 tggaagcacagatagacata 184
           ||||||||||||||||||||
Sbjct: 379 tggaagcacagatagacata 398
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>gb|AC146118.3| Pan troglodytes BAC clone RP43-23A6 from 7, complete sequence
          Length = 166241

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 494    tcgctcacactctctctctc 513
              ||||||||||||||||||||
Sbjct: 165731 tcgctcacactctctctctc 165750
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>emb|CR762443.6| Zebrafish DNA sequence from clone DKEY-3A5 in linkage group 10,
             complete sequence
          Length = 213185

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   tcgctcacactctctctctc 513
             ||||||||||||||||||||
Sbjct: 61104 tcgctcacactctctctctc 61085



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   tcgctcacactctctctctc 513
             ||||||||||||||||||||
Sbjct: 61070 tcgctcacactctctctctc 61051
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>gb|AY456016.1| Cochliobolus heterostrophus putative histidine kinase HHK13p (HHK13)
            gene, complete cds
          Length = 5988

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   gcaagtatgcttagcaaaac 44
            ||||||||||||||||||||
Sbjct: 5424 gcaagtatgcttagcaaaac 5405
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>gb|AC004837.1| Homo sapiens PAC clone RP4-570D2 from 7, complete sequence
          Length = 135837

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 494   tcgctcacactctctctctc 513
             ||||||||||||||||||||
Sbjct: 54394 tcgctcacactctctctctc 54413
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>gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete sequence
          Length = 110572

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    acaaatgttcaccaaataca 158
              ||||||||||||||||||||
Sbjct: 103064 acaaatgttcaccaaataca 103083
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>emb|AL139375.18| Human DNA sequence from clone RP11-138N13 on chromosome 13q21.33-22.3,
              complete sequence
          Length = 146708

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    gtaaaagtctaacaaacagc 209
              ||||||||||||||||||||
Sbjct: 116776 gtaaaagtctaacaaacagc 116795
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>gb|AC163282.3| Mus musculus BAC clone RP23-454I20 from chromosome 12, complete sequence
          Length = 202583

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 494    tcgctcacactctctctctc 513
              ||||||||||||||||||||
Sbjct: 198492 tcgctcacactctctctctc 198511
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>gb|AC128710.2| Homo sapiens 3 BAC RP11-307C21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 135514

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 152    aaatacatcagagtggaagcacag 175
              |||||||||||| |||||||||||
Sbjct: 121799 aaatacatcagattggaagcacag 121822
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 158    atcagagtggaagcacagat 177
              ||||||||||||||||||||
Sbjct: 525304 atcagagtggaagcacagat 525323
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>gb|AC009562.9| Homo sapiens chromosome 15, clone RP11-348B17, complete sequence
          Length = 221475

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    tagcaaaaccaataaatata 55
             ||||||||||||||||||||
Sbjct: 27812 tagcaaaaccaataaatata 27793
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>gb|AY587007.1| Bacteriophage T5 strain ATCC 11303-B5, complete genome
          Length = 121752

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   tctgctacagcatcatcagg 447
             ||||||||||||||||||||
Sbjct: 63599 tctgctacagcatcatcagg 63580
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 150     ccaaatacatcagagtggaa 169
               ||||||||||||||||||||
Sbjct: 1387432 ccaaatacatcagagtggaa 1387413
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>emb|CT030161.10| Mouse DNA sequence from clone RP23-235H10 on chromosome 12, complete
              sequence
          Length = 234471

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 494    tcgctcacactctctctctc 513
              ||||||||||||||||||||
Sbjct: 181354 tcgctcacactctctctctc 181335
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>gb|AC134594.5| Mus musculus BAC clone RP23-388B6 from 12, complete sequence
          Length = 194521

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 494    tcgctcacactctctctctc 513
              ||||||||||||||||||||
Sbjct: 135428 tcgctcacactctctctctc 135409


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,866,557
Number of Sequences: 3902068
Number of extensions: 8866557
Number of successful extensions: 98137
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 97976
Number of HSP's gapped (non-prelim): 162
length of query: 513
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 490
effective length of database: 17,143,297,704
effective search space: 8400215874960
effective search space used: 8400215874960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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