>emb|X75638.1|STNICD S.tuberosum  mRNA for NADP-dependent isocitrate dehydrogenase
          Length = 1569

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 198  agtcttgatttgagctcagcagcaactgcgtcaatgaactcttc 241
            ||||||| |||||||||| | ||||| |||||||||||||||||
Sbjct: 1300 agtcttgctttgagctcatcggcaacagcgtcaatgaactcttc 1257

>gb|BT017177.1| Zea mays clone EL01N0369B08.c mRNA sequence
          Length = 1434

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 201  cttgatttgagctcagcagcaactgcgtcaatgaactc 238
            |||||| |||||||| ||||||| ||||||||||||||
Sbjct: 1128 cttgatctgagctcatcagcaacagcgtcaatgaactc 1091

>emb|X77944.1|NTNIDH N.tabacum (Xanthi) NADP-dependent Isocitrate dehydrogenase mRNA
          Length = 1584

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 198  agtcttgatttgagctcagcagcaactgcgtcaatgaactcttcag 243
            ||||||| |||||||||| | || || |||||||||||||||||||
Sbjct: 1313 agtcttgctttgagctcatcggccacggcgtcaatgaactcttcag 1268

>gb|AY107138.1| Zea mays PCO115488 mRNA sequence
          Length = 1634

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 201  cttgatttgagctcagcagcaactgcgtcaatgaactc 238
            |||||| |||||||| ||||||| ||||||||||||||
Sbjct: 1351 cttgatctgagctcatcagcaacagcgtcaatgaactc 1314

>ref|NM_192424.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1239

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 209  gagctcagcagcaactgcgtcaatgaactcttcag 243
            |||||| |||||||| || ||||||||||||||||
Sbjct: 1215 gagctccgcagcaaccgcatcaatgaactcttcag 1181

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 209      gagctcagcagcaactgcgtcaatgaactcttcag 243
                |||||| |||||||| || ||||||||||||||||
Sbjct: 26526715 gagctccgcagcaaccgcatcaatgaactcttcag 26526749

>dbj|AP003212.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           BAC clone:OSJNBa0049H05
          Length = 161934

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 209 gagctcagcagcaactgcgtcaatgaactcttcag 243
           |||||| |||||||| || ||||||||||||||||
Sbjct: 429 gagctccgcagcaaccgcatcaatgaactcttcag 463

>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0006H05
          Length = 154821

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 209    gagctcagcagcaactgcgtcaatgaactcttcag 243
              |||||| |||||||| || ||||||||||||||||
Sbjct: 135334 gagctccgcagcaaccgcatcaatgaactcttcag 135368

>dbj|AK061752.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H06, full
            insert sequence
          Length = 1686

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 209  gagctcagcagcaactgcgtcaatgaactcttcag 243
            |||||| |||||||| || ||||||||||||||||
Sbjct: 1301 gagctccgcagcaaccgcatcaatgaactcttcag 1267

>gb|AF155333.2|AF155333 Oryza sativa NADP-specific isocitrate dehydrogenase mRNA, complete
            cds
          Length = 1594

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 209  gagctcagcagcaactgcgtcaatgaactcttcag 243
            |||||| |||||||| || ||||||||||||||||
Sbjct: 1280 gagctccgcagcaaccgcatcaatgaactcttcag 1246

>ref|NM_105265.2| Arabidopsis thaliana isocitrate dehydrogenase (NADP+)/ oxidoreductase
            AT1G65930 mRNA, complete cds
          Length = 1663

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 206  tttgagctcagcagcaactgcgtcaatgaactc 238
            ||||||||||||||| ||||| || ||||||||
Sbjct: 1379 tttgagctcagcagcgactgcatcgatgaactc 1347

>gb|AC122005.3| Mus musculus chromosome 5 clone RP24-340B11, complete sequence
          Length = 183264

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 179   agtggaagaggactttcacag 199
             |||||||||||||||||||||
Sbjct: 67993 agtggaagaggactttcacag 67973

>gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosome 5, complete sequence
          Length = 173460

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 179    agtggaagaggactttcacag 199
              |||||||||||||||||||||
Sbjct: 159152 agtggaagaggactttcacag 159132

>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence
          Length = 141672

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 196   acagtcttgatttgagctcag 216
             |||||||||||||||||||||
Sbjct: 67430 acagtcttgatttgagctcag 67450

>emb|AJ437268.1|ATH437268 Arabidopsis thaliana mRNA for isocitrate dehydrogenase
          Length = 1610

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 206  tttgagctcagcagcaactgcgtcaatgaactc 238
            ||||||||||||||| ||||| || ||||||||
Sbjct: 1379 tttgagctcagcagcgactgcatcgatgaactc 1347

>gb|AY097340.1| Arabidopsis thaliana At1g65930/F12P19_10 mRNA, complete cds
          Length = 1233

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 206  tttgagctcagcagcaactgcgtcaatgaactc 238
            ||||||||||||||| ||||| || ||||||||
Sbjct: 1215 tttgagctcagcagcgactgcatcgatgaactc 1183

>gb|AF419575.1|AF419575 Arabidopsis thaliana At1g65930/F12P19_10 mRNA, complete cds
          Length = 1636

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 206  tttgagctcagcagcaactgcgtcaatgaactc 238
            ||||||||||||||| ||||| || ||||||||
Sbjct: 1368 tttgagctcagcagcgactgcatcgatgaactc 1336

>dbj|AK220845.1| Arabidopsis thaliana mRNA for NADP specific isocitrate
           dehydrogenase like protein, partial cds, clone:
           RAFL22-38-I02
          Length = 517

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 206 tttgagctcagcagcaactgcgtcaatgaactc 238
           ||||||||||||||| ||||| || ||||||||
Sbjct: 255 tttgagctcagcagcgactgcatcgatgaactc 223

>gb|AY045631.1| Arabidopsis thaliana At1g65930/F12P19_10 mRNA, complete cds
          Length = 1653

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 206  tttgagctcagcagcaactgcgtcaatgaactc 238
            ||||||||||||||| ||||| || ||||||||
Sbjct: 1368 tttgagctcagcagcgactgcatcgatgaactc 1336

>gb|AY088129.1| Arabidopsis thaliana clone 41544 mRNA, complete sequence
          Length = 1554

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 206  tttgagctcagcagcaactgcgtcaatgaactc 238
            ||||||||||||||| ||||| || ||||||||
Sbjct: 1368 tttgagctcagcagcgactgcatcgatgaactc 1336

>gb|BT002400.1| Arabidopsis thaliana isocitrate dehydrogenase, putative (At1g65930)
            mRNA, complete cds
          Length = 1581

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 206  tttgagctcagcagcaactgcgtcaatgaactc 238
            ||||||||||||||| ||||| || ||||||||
Sbjct: 1368 tttgagctcagcagcgactgcatcgatgaactc 1336

>gb|AC009513.2|F12P19 Sequence of BAC F12P19 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 81490

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 206   tttgagctcagcagcaactgcgtcaatgaactc 238
             ||||||||||||||| ||||| || ||||||||
Sbjct: 47204 tttgagctcagcagcgactgcatcgatgaactc 47172

>ref|XM_532167.2| PREDICTED: Canis familiaris similar to Phosphoglycerate kinase,
           testis specific (LOC474933), mRNA
          Length = 1333

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 gatttgagctcagcagcaac 223
           ||||||||||||||||||||
Sbjct: 339 gatttgagctcagcagcaac 320

>gb|AC123944.4| Mus musculus BAC clone RP24-87F18 from chromosome 10, complete sequence
          Length = 194243

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 182    ggaagaggactttcacagtcttga 205
              ||||||||||| ||||||||||||
Sbjct: 110982 ggaagaggactgtcacagtcttga 111005

>emb|AJ315378.1|ECA315378 Equus caballus CRISP1 gene for cystein-rich secretory protein 1 and
             PGK2 gene for testis-specific phosphoglycerate kinase
          Length = 90631

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   gatttgagctcagcagcaac 223
             ||||||||||||||||||||
Sbjct: 76447 gatttgagctcagcagcaac 76428


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,950,384
Number of Sequences: 3902068
Number of extensions: 1950384
Number of successful extensions: 27341
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27311
Number of HSP's gapped (non-prelim): 30
length of query: 243
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 221
effective length of database: 17,147,199,772
effective search space: 3789531149612
effective search space used: 3789531149612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)