ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_197371.1| Oryza sativa (japonica cultivar-group) putative... 484 e-133
2gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 gen... 484 e-133
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 484 e-133
4dbj|AK099843.1| Oryza sativa (japonica cultivar-group) cDNA clon... 484 e-133
5dbj|AK068787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 484 e-133
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 484 e-133
7gb|AY105833.1| Zea mays PCO097323 mRNA sequence 406 e-110
8ref|XM_483641.1| Oryza sativa (japonica cultivar-group), mRNA 86 2e-13
9ref|XM_507320.1| PREDICTED Oryza sativa (japonica cultivar-group... 86 2e-13
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
11dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
12dbj|AK119577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 2e-13
13ref|NM_114795.2| Arabidopsis thaliana unknown protein AT3G49350 ... 82 3e-12
14emb|AL132956.2|ATF2K15 Arabidopsis thaliana DNA chromosome 3, BA... 82 3e-12
15gb|BT023442.1| Arabidopsis thaliana At3g49350 gene, complete cds 82 3e-12
16gb|AC012329.5|AC012329 Arabidopsis thaliana chromosome 1 BAC T1G... 82 3e-12
17dbj|AK101130.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 3e-12
18dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
19dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
20dbj|AK070219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 1e-11
21gb|AC141323.9| Medicago truncatula clone mth2-6a23, complete seq... 60 1e-05
22gb|AC149805.12| Medicago truncatula clone mth2-146o17, complete ... 60 1e-05
23gb|AY111774.1| Zea mays CL27690_1 mRNA sequence 58 4e-05
24ref|NM_124737.2| Arabidopsis thaliana unknown protein AT5G53570 ... 52 0.002
25gb|AY102156.1| Arabidopsis thaliana AT5g53570/MNC6_11 mRNA, comp... 52 0.002
26dbj|AK221904.1| Arabidopsis thaliana mRNA for GTPase activator p... 52 0.002
27gb|AY039546.1| Arabidopsis thaliana AT5g53570/MNC6_11 mRNA, comp... 52 0.002
28dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 52 0.002
29ref|NM_123957.2| Arabidopsis thaliana SAG12 (SENESCENCE-ASSOCIAT... 44 0.60
30gb|AF083753.1| Arabidopsis thaliana clone sps565 unknown mRNA 44 0.60
31gb|AY040073.1| Arabidopsis thaliana putative senescence-specific... 44 0.60
32gb|AF370131.1| Arabidopsis thaliana putative senescence-specific... 44 0.60
33gb|AC091216.1|CBRG46G14 Caenorhabditis briggsae cosmid G46G14, c... 44 0.60
34dbj|AB016870.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.60
35gb|AY112376.1| Zea mays CL41055_1 mRNA sequence 44 0.60
36gb|U37336.1|ATU37336 Arabidopsis thaliana senescence-specific pr... 44 0.60
37gb|BT013484.1| Lycopersicon esculentum clone 132167F, mRNA sequence 42 2.4
38emb|AL158812.10| Human DNA sequence from clone RP11-157E11 on ch... 42 2.4
39gb|AC004048.1|AC004048 Homo sapiens chromosome 4 clone B176A5 ma... 42 2.4
40dbj|AP001819.2| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 42 2.4
41gb|AC159413.1| Trypanosoma brucei chromosome 7 clone RPCI93-22O1... 40 9.3
42gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence 40 9.3
43gb|AC159433.1| Trypanosoma brucei chromosome 7 clone RPCI93-28I8... 40 9.3
44gb|AC090890.3| Canis familiaris clone RP81-196D8, complete sequence 40 9.3
45gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 9.3
46ref|XM_818769.1| Trypanosoma brucei TREU927 clone RPCI93-22O10 G... 40 9.3
47emb|CT010515.8| M.truncatula DNA sequence from clone MTH2-146B21... 40 9.3
48ref|XM_809525.1| Trypanosoma cruzi strain CL Brener histone deac... 40 9.3
49emb|AL157388.12| Human DNA sequence from clone RP11-215A21 on ch... 40 9.3
50gb|AC023983.11| Homo sapiens chromosome 18, clone RP11-621L6, co... 40 9.3
51dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 40 9.3
52gb|AC153849.8| Mus musculus BAC RP23-97L11 (Roswell Park Cancer... 40 9.3
53gb|AC079465.5| Homo sapiens chromosome 5 clone CTD-2124P24, comp... 40 9.3
54gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta... 40 9.3
55gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 9.3

>ref|NM_197371.1| Oryza sativa (japonica cultivar-group) putative GTPase activating
            protein (OSJNBa0076F20.7), mRNA
          Length = 1855

 Score =  484 bits (244), Expect = e-133
 Identities = 464/536 (86%), Gaps = 1/536 (0%)
 Strand = Plus / Minus

                                                                        
Query: 147  tcgtccaggagcttccaaatgtccagctgcccggccatgctgttacagtccctaatgatc 206
            |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 1718 tcgtccaggagcttccaaatgtccagctgcccagccatgctgttacactcccttatgatc 1659

                                                                        
Query: 207  tcatccatgctgctatagctctctattatcagtttcctcttctccagtacactggctgca 266
            ||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| |||
Sbjct: 1658 tcatccatgctgctatagctctctattatcagtttcctcttctgcagcacgctggccgca 1599

                                                                        
Query: 267  attgcatacagcagcaggtcatctgtcggaggggctccaagccgaagttttccccaggac 326
            |||||||| || |||| |||||| || ||||||||||| | ||| ||||| ||| | || 
Sbjct: 1598 attgcatatagtagcaagtcatcagttggaggggctcctaaccgcagtttccccaacgat 1539

                                                                        
Query: 327  gatcttgtgatcccagcacgcctcgctgcctgatcggcccacatcacctcccacaggctg 386
            ||| |||  || ||||||||  | |||||||||||||||||||| |||||||| || | |
Sbjct: 1538 gattttgcaattccagcacggtttgctgcctgatcggcccacataacctcccatagacag 1479

                                                                        
Query: 387  agggtctgctcgaaggtgagttccctccggaacatcacaaccaccattctataaacgaaa 446
            ||||||||||| ||||| || ||||| |||||||| || ||||||||||| ||||| || 
Sbjct: 1478 agggtctgctcaaaggtcagctcccttcggaacatgaccaccaccattctgtaaacaaag 1419

                                                                        
Query: 447  aagcagtctgcggcttcgagcatctccaggtgcctgtaaagatggaagtccttggttttt 506
            ||||||||  | |||| |||||||||||  || |||||||||||||||||||||  ||| 
Sbjct: 1418 aagcagtcctcagcttggagcatctccaaatgtctgtaaagatggaagtccttgtatttg 1359

                                                                        
Query: 507  attatcttggagaccatgttgagttgcctgcggatacccacttcgtcgagtctgaagttg 566
            |||||| |||  |||||||| ||||||||||| || |||||||| || || ||||| || 
Sbjct: 1358 attatcctggctaccatgttcagttgcctgcgaatgcccacttcatcaagcctgaaatta 1299

                                                                        
Query: 567  tggcgggctttcctcatgaaaccggcaaagcaccagaaggcttcatcgtcttcctccagc 626
            || |||||||||||||| ||||| |||||||||||||||||||||| ||| || ||||| 
Sbjct: 1298 tgacgggctttcctcataaaaccagcaaagcaccagaaggcttcattgtcatcttccagt 1239

                                                                    
Query: 627  acagcaagggagaggtgcaaggaggtcgctcatgccctggcaatagccaatttctg 682
            || |||| | ||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 1238 acggcaa-gtagaggtgcaagaaggtcgctcatgccctggcaatatccaatttctg 1184



to top

>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete
              sequence
          Length = 165394

 Score =  484 bits (244), Expect = e-133
 Identities = 464/536 (86%), Gaps = 1/536 (0%)
 Strand = Plus / Minus

                                                                          
Query: 147    tcgtccaggagcttccaaatgtccagctgcccggccatgctgttacagtccctaatgatc 206
              |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 136730 tcgtccaggagcttccaaatgtccagctgcccagccatgctgttacactcccttatgatc 136671

                                                                          
Query: 207    tcatccatgctgctatagctctctattatcagtttcctcttctccagtacactggctgca 266
              ||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| |||
Sbjct: 136670 tcatccatgctgctatagctctctattatcagtttcctcttctgcagcacgctggccgca 136611

                                                                          
Query: 267    attgcatacagcagcaggtcatctgtcggaggggctccaagccgaagttttccccaggac 326
              |||||||| || |||| |||||| || ||||||||||| | ||| ||||| ||| | || 
Sbjct: 136610 attgcatatagtagcaagtcatcagttggaggggctcctaaccgcagtttccccaacgat 136551

                                                                          
Query: 327    gatcttgtgatcccagcacgcctcgctgcctgatcggcccacatcacctcccacaggctg 386
              ||| |||  || ||||||||  | |||||||||||||||||||| |||||||| || | |
Sbjct: 136550 gattttgcaattccagcacggtttgctgcctgatcggcccacataacctcccatagacag 136491

                                                                          
Query: 387    agggtctgctcgaaggtgagttccctccggaacatcacaaccaccattctataaacgaaa 446
              ||||||||||| ||||| || ||||| |||||||| || ||||||||||| ||||| || 
Sbjct: 136490 agggtctgctcaaaggtcagctcccttcggaacatgaccaccaccattctgtaaacaaag 136431

                                                                          
Query: 447    aagcagtctgcggcttcgagcatctccaggtgcctgtaaagatggaagtccttggttttt 506
              ||||||||  | |||| |||||||||||  || |||||||||||||||||||||  ||| 
Sbjct: 136430 aagcagtcctcagcttggagcatctccaaatgtctgtaaagatggaagtccttgtatttg 136371

                                                                          
Query: 507    attatcttggagaccatgttgagttgcctgcggatacccacttcgtcgagtctgaagttg 566
              |||||| |||  |||||||| ||||||||||| || |||||||| || || ||||| || 
Sbjct: 136370 attatcctggctaccatgttcagttgcctgcgaatgcccacttcatcaagcctgaaatta 136311

                                                                          
Query: 567    tggcgggctttcctcatgaaaccggcaaagcaccagaaggcttcatcgtcttcctccagc 626
              || |||||||||||||| ||||| |||||||||||||||||||||| ||| || ||||| 
Sbjct: 136310 tgacgggctttcctcataaaaccagcaaagcaccagaaggcttcattgtcatcttccagt 136251

                                                                      
Query: 627    acagcaagggagaggtgcaaggaggtcgctcatgccctggcaatagccaatttctg 682
              || |||| | ||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 136250 acggcaa-gtagaggtgcaagaaggtcgctcatgccctggcaatatccaatttctg 136196



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  484 bits (244), Expect = e-133
 Identities = 464/536 (86%), Gaps = 1/536 (0%)
 Strand = Plus / Minus

                                                                            
Query: 147      tcgtccaggagcttccaaatgtccagctgcccggccatgctgttacagtccctaatgatc 206
                |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 19508864 tcgtccaggagcttccaaatgtccagctgcccagccatgctgttacactcccttatgatc 19508805

                                                                            
Query: 207      tcatccatgctgctatagctctctattatcagtttcctcttctccagtacactggctgca 266
                ||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| |||
Sbjct: 19508804 tcatccatgctgctatagctctctattatcagtttcctcttctgcagcacgctggccgca 19508745

                                                                            
Query: 267      attgcatacagcagcaggtcatctgtcggaggggctccaagccgaagttttccccaggac 326
                |||||||| || |||| |||||| || ||||||||||| | ||| ||||| ||| | || 
Sbjct: 19508744 attgcatatagtagcaagtcatcagttggaggggctcctaaccgcagtttccccaacgat 19508685

                                                                            
Query: 327      gatcttgtgatcccagcacgcctcgctgcctgatcggcccacatcacctcccacaggctg 386
                ||| |||  || ||||||||  | |||||||||||||||||||| |||||||| || | |
Sbjct: 19508684 gattttgcaattccagcacggtttgctgcctgatcggcccacataacctcccatagacag 19508625

                                                                            
Query: 387      agggtctgctcgaaggtgagttccctccggaacatcacaaccaccattctataaacgaaa 446
                ||||||||||| ||||| || ||||| |||||||| || ||||||||||| ||||| || 
Sbjct: 19508624 agggtctgctcaaaggtcagctcccttcggaacatgaccaccaccattctgtaaacaaag 19508565

                                                                            
Query: 447      aagcagtctgcggcttcgagcatctccaggtgcctgtaaagatggaagtccttggttttt 506
                ||||||||  | |||| |||||||||||  || |||||||||||||||||||||  ||| 
Sbjct: 19508564 aagcagtcctcagcttggagcatctccaaatgtctgtaaagatggaagtccttgtatttg 19508505

                                                                            
Query: 507      attatcttggagaccatgttgagttgcctgcggatacccacttcgtcgagtctgaagttg 566
                |||||| |||  |||||||| ||||||||||| || |||||||| || || ||||| || 
Sbjct: 19508504 attatcctggctaccatgttcagttgcctgcgaatgcccacttcatcaagcctgaaatta 19508445

                                                                            
Query: 567      tggcgggctttcctcatgaaaccggcaaagcaccagaaggcttcatcgtcttcctccagc 626
                || |||||||||||||| ||||| |||||||||||||||||||||| ||| || ||||| 
Sbjct: 19508444 tgacgggctttcctcataaaaccagcaaagcaccagaaggcttcattgtcatcttccagt 19508385

                                                                        
Query: 627      acagcaagggagaggtgcaaggaggtcgctcatgccctggcaatagccaatttctg 682
                || |||| | ||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 19508384 acggcaa-gtagaggtgcaagaaggtcgctcatgccctggcaatatccaatttctg 19508330



to top

>dbj|AK099843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108O08, full
            insert sequence
          Length = 1981

 Score =  484 bits (244), Expect = e-133
 Identities = 464/536 (86%), Gaps = 1/536 (0%)
 Strand = Plus / Minus

                                                                        
Query: 147  tcgtccaggagcttccaaatgtccagctgcccggccatgctgttacagtccctaatgatc 206
            |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 1844 tcgtccaggagcttccaaatgtccagctgcccagccatgctgttacactcccttatgatc 1785

                                                                        
Query: 207  tcatccatgctgctatagctctctattatcagtttcctcttctccagtacactggctgca 266
            ||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| |||
Sbjct: 1784 tcatccatgctgctatagctctctattatcagtttcctcttctgcagcacgctggccgca 1725

                                                                        
Query: 267  attgcatacagcagcaggtcatctgtcggaggggctccaagccgaagttttccccaggac 326
            |||||||| || |||| |||||| || ||||||||||| | ||| ||||| ||| | || 
Sbjct: 1724 attgcatatagtagcaagtcatcagttggaggggctcctaaccgcagtttccccaacgat 1665

                                                                        
Query: 327  gatcttgtgatcccagcacgcctcgctgcctgatcggcccacatcacctcccacaggctg 386
            ||| |||  || ||||||||  | |||||||||||||||||||| |||||||| || | |
Sbjct: 1664 gattttgcaattccagcacggtttgctgcctgatcggcccacataacctcccatagacag 1605

                                                                        
Query: 387  agggtctgctcgaaggtgagttccctccggaacatcacaaccaccattctataaacgaaa 446
            ||||||||||| ||||| || ||||| |||||||| || ||||||||||| ||||| || 
Sbjct: 1604 agggtctgctcaaaggtcagctcccttcggaacatgaccaccaccattctgtaaacaaag 1545

                                                                        
Query: 447  aagcagtctgcggcttcgagcatctccaggtgcctgtaaagatggaagtccttggttttt 506
            ||||||||  | |||| |||||||||||  || |||||||||||||||||||||  ||| 
Sbjct: 1544 aagcagtcctcagcttggagcatctccaaatgtctgtaaagatggaagtccttgtatttg 1485

                                                                        
Query: 507  attatcttggagaccatgttgagttgcctgcggatacccacttcgtcgagtctgaagttg 566
            |||||| |||  |||||||| ||||||||||| || |||||||| || || ||||| || 
Sbjct: 1484 attatcctggctaccatgttcagttgcctgcgaatgcccacttcatcaagcctgaaatta 1425

                                                                        
Query: 567  tggcgggctttcctcatgaaaccggcaaagcaccagaaggcttcatcgtcttcctccagc 626
            || |||||||||||||| ||||| |||||||||||||||||||||| ||| || ||||| 
Sbjct: 1424 tgacgggctttcctcataaaaccagcaaagcaccagaaggcttcattgtcatcttccagt 1365

                                                                    
Query: 627  acagcaagggagaggtgcaaggaggtcgctcatgccctggcaatagccaatttctg 682
            || |||| | ||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 1364 acggcaa-gtagaggtgcaagaaggtcgctcatgccctggcaatatccaatttctg 1310



to top

>dbj|AK068787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164O13, full
            insert sequence
          Length = 2207

 Score =  484 bits (244), Expect = e-133
 Identities = 464/536 (86%), Gaps = 1/536 (0%)
 Strand = Plus / Minus

                                                                        
Query: 147  tcgtccaggagcttccaaatgtccagctgcccggccatgctgttacagtccctaatgatc 206
            |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 1843 tcgtccaggagcttccaaatgtccagctgcccagccatgctgttacactcccttatgatc 1784

                                                                        
Query: 207  tcatccatgctgctatagctctctattatcagtttcctcttctccagtacactggctgca 266
            ||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| |||
Sbjct: 1783 tcatccatgctgctatagctctctattatcagtttcctcttctgcagcacgctggccgca 1724

                                                                        
Query: 267  attgcatacagcagcaggtcatctgtcggaggggctccaagccgaagttttccccaggac 326
            |||||||| || |||| |||||| || ||||||||||| | ||| ||||| ||| | || 
Sbjct: 1723 attgcatatagtagcaagtcatcagttggaggggctcctaaccgcagtttccccaacgat 1664

                                                                        
Query: 327  gatcttgtgatcccagcacgcctcgctgcctgatcggcccacatcacctcccacaggctg 386
            ||| |||  || ||||||||  | |||||||||||||||||||| |||||||| || | |
Sbjct: 1663 gattttgcaattccagcacggtttgctgcctgatcggcccacataacctcccatagacag 1604

                                                                        
Query: 387  agggtctgctcgaaggtgagttccctccggaacatcacaaccaccattctataaacgaaa 446
            ||||||||||| ||||| || ||||| |||||||| || ||||||||||| ||||| || 
Sbjct: 1603 agggtctgctcaaaggtcagctcccttcggaacatgaccaccaccattctgtaaacaaag 1544

                                                                        
Query: 447  aagcagtctgcggcttcgagcatctccaggtgcctgtaaagatggaagtccttggttttt 506
            ||||||||  | |||| |||||||||||  || |||||||||||||||||||||  ||| 
Sbjct: 1543 aagcagtcctcagcttggagcatctccaaatgtctgtaaagatggaagtccttgtatttg 1484

                                                                        
Query: 507  attatcttggagaccatgttgagttgcctgcggatacccacttcgtcgagtctgaagttg 566
            |||||| |||  |||||||| ||||||||||| || |||||||| || || ||||| || 
Sbjct: 1483 attatcctggctaccatgttcagttgcctgcgaatgcccacttcatcaagcctgaaatta 1424

                                                                        
Query: 567  tggcgggctttcctcatgaaaccggcaaagcaccagaaggcttcatcgtcttcctccagc 626
            || |||||||||||||| ||||| |||||||||||||||||||||| ||| || ||||| 
Sbjct: 1423 tgacgggctttcctcataaaaccagcaaagcaccagaaggcttcattgtcatcttccagt 1364

                                                                    
Query: 627  acagcaagggagaggtgcaaggaggtcgctcatgccctggcaatagccaatttctg 682
            || |||| | ||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 1363 acggcaa-gtagaggtgcaagaaggtcgctcatgccctggcaatatccaatttctg 1309



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  484 bits (244), Expect = e-133
 Identities = 464/536 (86%), Gaps = 1/536 (0%)
 Strand = Plus / Minus

                                                                            
Query: 147      tcgtccaggagcttccaaatgtccagctgcccggccatgctgttacagtccctaatgatc 206
                |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 19520140 tcgtccaggagcttccaaatgtccagctgcccagccatgctgttacactcccttatgatc 19520081

                                                                            
Query: 207      tcatccatgctgctatagctctctattatcagtttcctcttctccagtacactggctgca 266
                ||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| |||
Sbjct: 19520080 tcatccatgctgctatagctctctattatcagtttcctcttctgcagcacgctggccgca 19520021

                                                                            
Query: 267      attgcatacagcagcaggtcatctgtcggaggggctccaagccgaagttttccccaggac 326
                |||||||| || |||| |||||| || ||||||||||| | ||| ||||| ||| | || 
Sbjct: 19520020 attgcatatagtagcaagtcatcagttggaggggctcctaaccgcagtttccccaacgat 19519961

                                                                            
Query: 327      gatcttgtgatcccagcacgcctcgctgcctgatcggcccacatcacctcccacaggctg 386
                ||| |||  || ||||||||  | |||||||||||||||||||| |||||||| || | |
Sbjct: 19519960 gattttgcaattccagcacggtttgctgcctgatcggcccacataacctcccatagacag 19519901

                                                                            
Query: 387      agggtctgctcgaaggtgagttccctccggaacatcacaaccaccattctataaacgaaa 446
                ||||||||||| ||||| || ||||| |||||||| || ||||||||||| ||||| || 
Sbjct: 19519900 agggtctgctcaaaggtcagctcccttcggaacatgaccaccaccattctgtaaacaaag 19519841

                                                                            
Query: 447      aagcagtctgcggcttcgagcatctccaggtgcctgtaaagatggaagtccttggttttt 506
                ||||||||  | |||| |||||||||||  || |||||||||||||||||||||  ||| 
Sbjct: 19519840 aagcagtcctcagcttggagcatctccaaatgtctgtaaagatggaagtccttgtatttg 19519781

                                                                            
Query: 507      attatcttggagaccatgttgagttgcctgcggatacccacttcgtcgagtctgaagttg 566
                |||||| |||  |||||||| ||||||||||| || |||||||| || || ||||| || 
Sbjct: 19519780 attatcctggctaccatgttcagttgcctgcgaatgcccacttcatcaagcctgaaatta 19519721

                                                                            
Query: 567      tggcgggctttcctcatgaaaccggcaaagcaccagaaggcttcatcgtcttcctccagc 626
                || |||||||||||||| ||||| |||||||||||||||||||||| ||| || ||||| 
Sbjct: 19519720 tgacgggctttcctcataaaaccagcaaagcaccagaaggcttcattgtcatcttccagt 19519661

                                                                        
Query: 627      acagcaagggagaggtgcaaggaggtcgctcatgccctggcaatagccaatttctg 682
                || |||| | ||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 19519660 acggcaa-gtagaggtgcaagaaggtcgctcatgccctggcaatatccaatttctg 19519606



to top

>gb|AY105833.1| Zea mays PCO097323 mRNA sequence
          Length = 778

 Score =  406 bits (205), Expect = e-110
 Identities = 418/489 (85%)
 Strand = Plus / Minus

                                                                       
Query: 101 cagctactcgatcctgtcttgtacggtcaccactaaatcatgggcgtcgtccaggagctt 160
           ||||||||||||||| || || | ||||||||| | ||| || || ||||||||||||||
Sbjct: 499 cagctactcgatcctatcgtgaagggtcaccacaagatcgtgcgcatcgtccaggagctt 440

                                                                       
Query: 161 ccaaatgtccagctgcccggccatgctgttacagtccctaatgatctcatccatgctgct 220
           |||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| |
Sbjct: 439 ccaaatgtccagctgcccagccatgctgttacactcccttatgatctcatccatgctgtt 380

                                                                       
Query: 221 atagctctctattatcagtttcctcttctccagtacactggctgcaattgcatacagcag 280
            ||||| |||||||||||||||| ||||| ||  ||||| || ||||| |||||||| | 
Sbjct: 379 gtagctttctattatcagtttccgcttctgcaacacactagcagcaatcgcatacagtaa 320

                                                                       
Query: 281 caggtcatctgtcggaggggctccaagccgaagttttccccaggacgatcttgtgatccc 340
           ||| |||||||| ||||| ||||| | | | | ||| | |||||| ||  ||| |||| |
Sbjct: 319 cagatcatctgttggaggcgctcccaactgcaatttacgccaggatgagtttgcgatctc 260

                                                                       
Query: 341 agcacgcctcgctgcctgatcggcccacatcacctcccacaggctgagggtctgctcgaa 400
            || ||  | ||||||||||| ||||||||||||||||| || |  ||||||||||||||
Sbjct: 259 ggcgcggtttgctgcctgatcagcccacatcacctcccagagacatagggtctgctcgaa 200

                                                                       
Query: 401 ggtgagttccctccggaacatcacaaccaccattctataaacgaaaaagcagtctgcggc 460
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||
Sbjct: 199 ggtgagttccctccggaacatcacaaccaccattctgtaaacgaaaaagcagtcttcagc 140

                                                                       
Query: 461 ttcgagcatctccaggtgcctgtaaagatggaagtccttggtttttattatcttggagac 520
           || |||||||||||  || ||||| |||||||||||||||  ||| |||||| |||  ||
Sbjct: 139 ttggagcatctccaaatgtctgtagagatggaagtccttgtatttgattatcctggcaac 80

                                                                       
Query: 521 catgttgagttgcctgcggatacccacttcgtcgagtctgaagttgtggcgggctttcct 580
           ||| |||||||||| ||| ||||||||||| || || || ||||||||||||||||||||
Sbjct: 79  catattgagttgccggcgtatacccacttcatcaagcctaaagttgtggcgggctttcct 20

                    
Query: 581 catgaaacc 589
           ||| |||||
Sbjct: 19  cataaaacc 11



to top

>ref|XM_483641.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2212

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 171  agctgcccggccatgctgttacagtccctaatgatctcatccatgctgctatagctctct 230
            |||||||| ||||||||||| || ||||| |  |||||||||||||||||||| ||||| 
Sbjct: 1820 agctgcccagccatgctgttgcactccctgagtatctcatccatgctgctatacctctca 1761

                                                                        
Query: 231  attatcagtttcctcttctccagtacactggctgcaattgcatacagcagcaggtcatct 290
            ||||| || ||||||||||  || |||| ||| ||||| ||||| |||| ||  ||||| 
Sbjct: 1760 attatgagcttcctcttctgtaggacacaggcagcaatggcatagagcaacaaatcatca 1701

                       
Query: 291  gtcggaggggc 301
            || ||||||||
Sbjct: 1700 gttggaggggc 1690



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                        
Query: 351  gctgcctgatcggcccacatcacctcccacaggctgagggtctgctcgaaggtgagttcc 410
            ||||| ||||| |||||||||||||||||||| |  ||||||||||| || ||||| |||
Sbjct: 1640 gctgcttgatcagcccacatcacctcccacagacacagggtctgctcaaaagtgagctcc 1581

                                                        
Query: 411  ctccggaacatcacaaccaccattctataaacgaaaaagcagtc 454
            || | ||| |  || ||||||||||| || || || ||||||||
Sbjct: 1580 cttctgaagagaaccaccaccattctgtatacaaagaagcagtc 1537



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 552  tcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaaggcttca 611
            ||||| ||||||||||| |  |||||||||||||| ||  |||| ||||| || ||||||
Sbjct: 1439 tcgagcctgaagttgtgcctcgctttcctcatgaagcccacaaaacaccaaaatgcttca 1380

                         
Query: 612  tcgtcttcctcca 624
            |  ||||||||||
Sbjct: 1379 tgatcttcctcca 1367



to top

>ref|XM_507320.1| PREDICTED Oryza sativa (japonica cultivar-group), P0544G09.9 mRNA
          Length = 2218

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 171  agctgcccggccatgctgttacagtccctaatgatctcatccatgctgctatagctctct 230
            |||||||| ||||||||||| || ||||| |  |||||||||||||||||||| ||||| 
Sbjct: 1821 agctgcccagccatgctgttgcactccctgagtatctcatccatgctgctatacctctca 1762

                                                                        
Query: 231  attatcagtttcctcttctccagtacactggctgcaattgcatacagcagcaggtcatct 290
            ||||| || ||||||||||  || |||| ||| ||||| ||||| |||| ||  ||||| 
Sbjct: 1761 attatgagcttcctcttctgtaggacacaggcagcaatggcatagagcaacaaatcatca 1702

                       
Query: 291  gtcggaggggc 301
            || ||||||||
Sbjct: 1701 gttggaggggc 1691



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                        
Query: 351  gctgcctgatcggcccacatcacctcccacaggctgagggtctgctcgaaggtgagttcc 410
            ||||| ||||| |||||||||||||||||||| |  ||||||||||| || ||||| |||
Sbjct: 1641 gctgcttgatcagcccacatcacctcccacagacacagggtctgctcaaaagtgagctcc 1582

                                                        
Query: 411  ctccggaacatcacaaccaccattctataaacgaaaaagcagtc 454
            || | ||| |  || ||||||||||| || || || ||||||||
Sbjct: 1581 cttctgaagagaaccaccaccattctgtatacaaagaagcagtc 1538



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 552  tcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaaggcttca 611
            ||||| ||||||||||| |  |||||||||||||| ||  |||| ||||| || ||||||
Sbjct: 1440 tcgagcctgaagttgtgcctcgctttcctcatgaagcccacaaaacaccaaaatgcttca 1381

                         
Query: 612  tcgtcttcctcca 624
            |  ||||||||||
Sbjct: 1380 tgatcttcctcca 1368



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                            
Query: 171      agctgcccggccatgctgttacagtccctaatgatctcatccatgctgctatagctctct 230
                |||||||| ||||||||||| || ||||| |  |||||||||||||||||||| ||||| 
Sbjct: 27406241 agctgcccagccatgctgttgcactccctgagtatctcatccatgctgctatacctctca 27406182

                                                                            
Query: 231      attatcagtttcctcttctccagtacactggctgcaattgcatacagcagcaggtcatct 290
                ||||| || ||||||||||  || |||| ||| ||||| ||||| |||| ||  ||||| 
Sbjct: 27406181 attatgagcttcctcttctgtaggacacaggcagcaatggcatagagcaacaaatcatca 27406122

                           
Query: 291      gtcggaggggc 301
                || ||||||||
Sbjct: 27406121 gttggaggggc 27406111



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                            
Query: 351      gctgcctgatcggcccacatcacctcccacaggctgagggtctgctcgaaggtgagttcc 410
                ||||| ||||| |||||||||||||||||||| |  ||||||||||| || ||||| |||
Sbjct: 27406061 gctgcttgatcagcccacatcacctcccacagacacagggtctgctcaaaagtgagctcc 27406002

                                                            
Query: 411      ctccggaacatcacaaccaccattctataaacgaaaaagcagtc 454
                || | ||| |  || ||||||||||| || || || ||||||||
Sbjct: 27406001 cttctgaagagaaccaccaccattctgtatacaaagaagcagtc 27405958



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                            
Query: 552      tcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaaggcttca 611
                ||||| ||||||||||| |  |||||||||||||| ||  |||| ||||| || ||||||
Sbjct: 27405860 tcgagcctgaagttgtgcctcgctttcctcatgaagcccacaaaacaccaaaatgcttca 27405801

                             
Query: 612      tcgtcttcctcca 624
                |  ||||||||||
Sbjct: 27405800 tgatcttcctcca 27405788



to top

>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0544G09
          Length = 137481

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                         
Query: 171   agctgcccggccatgctgttacagtccctaatgatctcatccatgctgctatagctctct 230
             |||||||| ||||||||||| || ||||| |  |||||||||||||||||||| ||||| 
Sbjct: 33036 agctgcccagccatgctgttgcactccctgagtatctcatccatgctgctatacctctca 32977

                                                                         
Query: 231   attatcagtttcctcttctccagtacactggctgcaattgcatacagcagcaggtcatct 290
             ||||| || ||||||||||  || |||| ||| ||||| ||||| |||| ||  ||||| 
Sbjct: 32976 attatgagcttcctcttctgtaggacacaggcagcaatggcatagagcaacaaatcatca 32917

                        
Query: 291   gtcggaggggc 301
             || ||||||||
Sbjct: 32916 gttggaggggc 32906



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                         
Query: 351   gctgcctgatcggcccacatcacctcccacaggctgagggtctgctcgaaggtgagttcc 410
             ||||| ||||| |||||||||||||||||||| |  ||||||||||| || ||||| |||
Sbjct: 32856 gctgcttgatcagcccacatcacctcccacagacacagggtctgctcaaaagtgagctcc 32797

                                                         
Query: 411   ctccggaacatcacaaccaccattctataaacgaaaaagcagtc 454
             || | ||| |  || ||||||||||| || || || ||||||||
Sbjct: 32796 cttctgaagagaaccaccaccattctgtatacaaagaagcagtc 32753



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                         
Query: 552   tcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaaggcttca 611
             ||||| ||||||||||| |  |||||||||||||| ||  |||| ||||| || ||||||
Sbjct: 32655 tcgagcctgaagttgtgcctcgctttcctcatgaagcccacaaaacaccaaaatgcttca 32596

                          
Query: 612   tcgtcttcctcca 624
             |  ||||||||||
Sbjct: 32595 tgatcttcctcca 32583



to top

>dbj|AK119577.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-B08, full
            insert sequence
          Length = 2212

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 171  agctgcccggccatgctgttacagtccctaatgatctcatccatgctgctatagctctct 230
            |||||||| ||||||||||| || ||||| |  |||||||||||||||||||| ||||| 
Sbjct: 1820 agctgcccagccatgctgttgcactccctgagtatctcatccatgctgctatacctctca 1761

                                                                        
Query: 231  attatcagtttcctcttctccagtacactggctgcaattgcatacagcagcaggtcatct 290
            ||||| || ||||||||||  || |||| ||| ||||| ||||| |||| ||  ||||| 
Sbjct: 1760 attatgagcttcctcttctgtaggacacaggcagcaatggcatagagcaacaaatcatca 1701

                       
Query: 291  gtcggaggggc 301
            || ||||||||
Sbjct: 1700 gttggaggggc 1690



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                        
Query: 351  gctgcctgatcggcccacatcacctcccacaggctgagggtctgctcgaaggtgagttcc 410
            ||||| ||||| |||||||||||||||||||| |  ||||||||||| || ||||| |||
Sbjct: 1640 gctgcttgatcagcccacatcacctcccacagacacagggtctgctcaaaagtgagctcc 1581

                                                        
Query: 411  ctccggaacatcacaaccaccattctataaacgaaaaagcagtc 454
            || | ||| |  || ||||||||||| || || || ||||||||
Sbjct: 1580 cttctgaagagaaccaccaccattctgtatacaaagaagcagtc 1537



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 552  tcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaaggcttca 611
            ||||| ||||||||||| |  |||||||||||||| ||  |||| ||||| || ||||||
Sbjct: 1439 tcgagcctgaagttgtgcctcgctttcctcatgaagcccacaaaacaccaaaatgcttca 1380

                         
Query: 612  tcgtcttcctcca 624
            |  ||||||||||
Sbjct: 1379 tgatcttcctcca 1367



to top

>ref|NM_114795.2| Arabidopsis thaliana unknown protein AT3G49350 mRNA, complete cds
          Length = 2478

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 158/197 (80%)
 Strand = Plus / Minus

                                                                        
Query: 416  gaacatcacaaccaccattctataaacgaaaaagcagtctgcggcttcgagcatctccag 475
            |||||||||||| |||||||| || || || || |||||| | |||| |||  |||| ||
Sbjct: 1684 gaacatcacaacaaccattctgtatacaaagaaacagtcttcagcttggagtttctcaag 1625

                                                                        
Query: 476  gtgcctgtaaagatggaagtccttggtttttattatcttggagaccatgttgagttgcct 535
            |||||| ||||| ||  |||| || | ||| |||||||| ||||| ||||||||||| ||
Sbjct: 1624 gtgcctataaagctgagagtctttagatttgattatctttgagactatgttgagttgtct 1565

                                                                        
Query: 536  gcggatacccacttcgtcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaa 595
             | ||| || || ||||| |||||||| ||||| || |||||| ||||||| ||| | ||
Sbjct: 1564 tctgattccaacctcgtcaagtctgaaattgtgacgagctttcttcatgaacccgacgaa 1505

                             
Query: 596  gcaccagaaggcttcat 612
             ||||| ||| ||||||
Sbjct: 1504 acaccaaaagacttcat 1488



to top

>emb|AL132956.2|ATF2K15 Arabidopsis thaliana DNA chromosome 3, BAC clone F2K15
          Length = 129757

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 158/197 (80%)
 Strand = Plus / Plus

                                                                          
Query: 416    gaacatcacaaccaccattctataaacgaaaaagcagtctgcggcttcgagcatctccag 475
              |||||||||||| |||||||| || || || || |||||| | |||| |||  |||| ||
Sbjct: 100644 gaacatcacaacaaccattctgtatacaaagaaacagtcttcagcttggagtttctcaag 100703

                                                                          
Query: 476    gtgcctgtaaagatggaagtccttggtttttattatcttggagaccatgttgagttgcct 535
              |||||| ||||| ||  |||| || | ||| |||||||| ||||| ||||||||||| ||
Sbjct: 100704 gtgcctataaagctgagagtctttagatttgattatctttgagactatgttgagttgtct 100763

                                                                          
Query: 536    gcggatacccacttcgtcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaa 595
               | ||| || || ||||| |||||||| ||||| || |||||| ||||||| ||| | ||
Sbjct: 100764 tctgattccaacctcgtcaagtctgaaattgtgacgagctttcttcatgaacccgacgaa 100823

                               
Query: 596    gcaccagaaggcttcat 612
               ||||| ||| ||||||
Sbjct: 100824 acaccaaaagacttcat 100840



to top

>gb|BT023442.1| Arabidopsis thaliana At3g49350 gene, complete cds
          Length = 2116

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 158/197 (80%)
 Strand = Plus / Minus

                                                                        
Query: 416  gaacatcacaaccaccattctataaacgaaaaagcagtctgcggcttcgagcatctccag 475
            |||||||||||| |||||||| || || || || |||||| | |||| |||  |||| ||
Sbjct: 1608 gaacatcacaacaaccattctgtatacaaagaaacagtcttcagcttggagtttctcaag 1549

                                                                        
Query: 476  gtgcctgtaaagatggaagtccttggtttttattatcttggagaccatgttgagttgcct 535
            |||||| ||||| ||  |||| || | ||| |||||||| ||||| ||||||||||| ||
Sbjct: 1548 gtgcctataaagctgagagtctttagatttgattatctttgagactatgttgagttgtct 1489

                                                                        
Query: 536  gcggatacccacttcgtcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaa 595
             | ||| || || ||||| |||||||| ||||| || |||||| ||||||| ||| | ||
Sbjct: 1488 tctgattccaacctcgtcaagtctgaaattgtgacgagctttcttcatgaacccgacgaa 1429

                             
Query: 596  gcaccagaaggcttcat 612
             ||||| ||| ||||||
Sbjct: 1428 acaccaaaagacttcat 1412



to top

>gb|AC012329.5|AC012329 Arabidopsis thaliana chromosome 1 BAC T1G12 genomic sequence, complete
             sequence
          Length = 80367

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 158/197 (80%)
 Strand = Plus / Plus

                                                                         
Query: 416   gaacatcacaaccaccattctataaacgaaaaagcagtctgcggcttcgagcatctccag 475
             |||||||||||| |||||||| || || || || |||||| | |||| |||  |||| ||
Sbjct: 18779 gaacatcacaacaaccattctgtatacaaagaaacagtcttcagcttggagtttctcaag 18838

                                                                         
Query: 476   gtgcctgtaaagatggaagtccttggtttttattatcttggagaccatgttgagttgcct 535
             |||||| ||||| ||  |||| || | ||| |||||||| ||||| ||||||||||| ||
Sbjct: 18839 gtgcctataaagctgagagtctttagatttgattatctttgagactatgttgagttgtct 18898

                                                                         
Query: 536   gcggatacccacttcgtcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaa 595
              | ||| || || ||||| |||||||| ||||| || |||||| ||||||| ||| | ||
Sbjct: 18899 tctgattccaacctcgtcaagtctgaaattgtgacgagctttcttcatgaacccgacgaa 18958

                              
Query: 596   gcaccagaaggcttcat 612
              ||||| ||| ||||||
Sbjct: 18959 acaccaaaagacttcat 18975



to top

>dbj|AK101130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026C08, full
            insert sequence
          Length = 2217

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 92/109 (84%)
 Strand = Plus / Minus

                                                                        
Query: 171  agctgcccggccatgctgttacagtccctaatgatctcatccatgctgctatagctctct 230
            |||||||| ||||||||||| || ||||| |  |||||||||||||||||||| ||||| 
Sbjct: 1821 agctgcccagccatgctgttgcactccctgagtatctcatccatgctgctatacctctca 1762

                                                             
Query: 231  attatcagtttcctcttctccagtacactggctgcaattgcatacagca 279
            ||||| || ||||||||||  || |||| ||| ||||| ||||| ||||
Sbjct: 1761 attatgagcttcctcttctgtaggacacaggcagcaatggcatagagca 1713



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                        
Query: 351  gctgcctgatcggcccacatcacctcccacaggctgagggtctgctcgaaggtgagttcc 410
            ||||| ||||| |||||||||||||||||||| |  ||||||||||| || ||||| |||
Sbjct: 1641 gctgcttgatcagcccacatcacctcccacagacacagggtctgctcaaaagtgagctcc 1582

                                                        
Query: 411  ctccggaacatcacaaccaccattctataaacgaaaaagcagtc 454
            || | ||| |  || ||||||||||| || || || ||||||||
Sbjct: 1581 cttctgaagagaaccaccaccattctgtatacaaagaagcagtc 1538



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 552  tcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaaggcttca 611
            ||||| ||||||||||| |  |||||||||||||| ||  |||| ||||| || ||||||
Sbjct: 1440 tcgagcctgaagttgtgcctcgctttcctcatgaagcccacaaaacaccaaaatgcttca 1381

                         
Query: 612  tcgtcttcctcca 624
            |  ||||||||||
Sbjct: 1380 tgatcttcctcca 1368



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                            
Query: 558      ctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaaggcttcatcgtct 617
                ||||||||||| | ||||||||||||||||||  |||||||||| || ||||||||||| 
Sbjct: 20415814 ctgaagttgtgcctggctttcctcatgaaacccacaaagcaccaaaatgcttcatcgtcc 20415873

                                
Query: 618      tcctccagcacagcaa 633
                ||||||| ||| ||||
Sbjct: 20415874 tcctccatcactgcaa 20415889



to top

>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1531_B07
          Length = 115245

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                         
Query: 558   ctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaaggcttcatcgtct 617
             ||||||||||| | ||||||||||||||||||  |||||||||| || ||||||||||| 
Sbjct: 43953 ctgaagttgtgcctggctttcctcatgaaacccacaaagcaccaaaatgcttcatcgtcc 44012

                             
Query: 618   tcctccagcacagcaa 633
             ||||||| ||| ||||
Sbjct: 44013 tcctccatcactgcaa 44028



to top

>dbj|AK070219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043K12, full
            insert sequence
          Length = 2098

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                        
Query: 558  ctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaaggcttcatcgtct 617
            ||||||||||| | ||||||||||||||||||  |||||||||| || ||||||||||| 
Sbjct: 1302 ctgaagttgtgcctggctttcctcatgaaacccacaaagcaccaaaatgcttcatcgtcc 1243

                            
Query: 618  tcctccagcacagcaa 633
            ||||||| ||| ||||
Sbjct: 1242 tcctccatcactgcaa 1227



to top

>gb|AC141323.9| Medicago truncatula clone mth2-6a23, complete sequence
          Length = 132894

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 182   catgctgttacagtccctaatgatctcatccatgctgctata 223
             |||||| || || |||||||||||||||||||||||||||||
Sbjct: 15768 catgctattgcattccctaatgatctcatccatgctgctata 15809



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 405   agttccctccggaacatcacaaccaccattctataaacgaaaaagca 451
             ||||||||||| ||||  || |||||||| |||||||| ||||||||
Sbjct: 15991 agttccctccgaaacaataccaccaccatcctataaacaaaaaagca 16037



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 649   aggtcgctcatgccctggcaatagccaatttc 680
             ||||| ||||| |||||||| |||||||||||
Sbjct: 16234 aggtcactcataccctggcagtagccaatttc 16265



to top

>gb|AC149805.12| Medicago truncatula clone mth2-146o17, complete sequence
          Length = 89758

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 182   catgctgttacagtccctaatgatctcatccatgctgctata 223
             |||||| || || |||||||||||||||||||||||||||||
Sbjct: 47916 catgctattgcattccctaatgatctcatccatgctgctata 47957



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 405   agttccctccggaacatcacaaccaccattctataaacgaaaaagca 451
             ||||||||||| ||||  || |||||||| |||||||| ||||||||
Sbjct: 48139 agttccctccgaaacaataccaccaccatcctataaacaaaaaagca 48185



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 649   aggtcgctcatgccctggcaatagccaatttc 680
             ||||| ||||| |||||||| |||||||||||
Sbjct: 48382 aggtcactcataccctggcagtagccaatttc 48413



to top

>gb|AY111774.1| Zea mays CL27690_1 mRNA sequence
          Length = 538

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                       
Query: 153 aggagcttccaaatgtccagctgcccggccatgctgttacagtccctaatgatctcatcc 212
           ||||||||||| |  || ||||||||||||||||| ||||| ||||  |  |||||||||
Sbjct: 349 aggagcttccagacatctagctgcccggccatgctattacactcccgcagtatctcatcc 408

                                            
Query: 213 atgctgctatagctctctattatcagtttcctc 245
           ||||| || ||  |||| |||||||| ||||||
Sbjct: 409 atgctactgtacttctcgattatcagcttcctc 441



to top

>ref|NM_124737.2| Arabidopsis thaliana unknown protein AT5G53570 mRNA, complete cds
          Length = 2367

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 547  cttcgtcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaa 604
            ||||||| || ||||| ||||| || |||||| ||||||||||  |||||||||||||
Sbjct: 1569 cttcgtcaagcctgaaattgtgccgagctttcttcatgaaaccaacaaagcaccagaa 1512



to top

>gb|AY102156.1| Arabidopsis thaliana AT5g53570/MNC6_11 mRNA, complete cds
          Length = 1653

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 547  cttcgtcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaa 604
            ||||||| || ||||| ||||| || |||||| ||||||||||  |||||||||||||
Sbjct: 1189 cttcgtcaagcctgaaattgtgccgagctttcttcatgaaaccaacaaagcaccagaa 1132



to top

>dbj|AK221904.1| Arabidopsis thaliana mRNA for GTPase activator protein of Rab-like
           small GTPases-like protein, partial cds, clone:
           RAFL22-33-M06
          Length = 1275

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 547 cttcgtcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaa 604
           ||||||| || ||||| ||||| || |||||| ||||||||||  |||||||||||||
Sbjct: 482 cttcgtcaagcctgaaattgtgccgagctttcttcatgaaaccaacaaagcaccagaa 425



to top

>gb|AY039546.1| Arabidopsis thaliana AT5g53570/MNC6_11 mRNA, complete cds
          Length = 2273

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 547  cttcgtcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaa 604
            ||||||| || ||||| ||||| || |||||| ||||||||||  |||||||||||||
Sbjct: 1568 cttcgtcaagcctgaaattgtgccgagctttcttcatgaaaccaacaaagcaccagaa 1511



to top

>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6
          Length = 82952

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                       
Query: 547   cttcgtcgagtctgaagttgtggcgggctttcctcatgaaaccggcaaagcaccagaa 604
             ||||||| || ||||| ||||| || |||||| ||||||||||  |||||||||||||
Sbjct: 47621 cttcgtcaagcctgaaattgtgccgagctttcttcatgaaaccaacaaagcaccagaa 47678



to top

>ref|NM_123957.2| Arabidopsis thaliana SAG12 (SENESCENCE-ASSOCIATED GENE 12);
           cysteine-type peptidase AT5G45890 (SAG12) mRNA, complete
           cds
          Length = 1253

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 584 gaaaccggcaaagcaccagaag 605
           ||||||||||||||||||||||
Sbjct: 439 gaaaccggcaaagcaccagaag 418



to top

>gb|AF083753.1| Arabidopsis thaliana clone sps565 unknown mRNA
          Length = 454

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 584 gaaaccggcaaagcaccagaag 605
           ||||||||||||||||||||||
Sbjct: 426 gaaaccggcaaagcaccagaag 405



to top

>gb|AY040073.1| Arabidopsis thaliana putative senescence-specific cysteine protease
           SAG12 (At5g45890) mRNA, complete cds
          Length = 1041

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 584 gaaaccggcaaagcaccagaag 605
           ||||||||||||||||||||||
Sbjct: 398 gaaaccggcaaagcaccagaag 377



to top

>gb|AF370131.1| Arabidopsis thaliana putative senescence-specific cysteine protease
           SAG12 (At5g45890) mRNA, complete cds
          Length = 1253

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 584 gaaaccggcaaagcaccagaag 605
           ||||||||||||||||||||||
Sbjct: 437 gaaaccggcaaagcaccagaag 416



to top

>gb|AC091216.1|CBRG46G14 Caenorhabditis briggsae cosmid G46G14, complete sequence
          Length = 41578

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 497   cttggtttttattatcttggag 518
             ||||||||||||||||||||||
Sbjct: 40361 cttggtttttattatcttggag 40382



to top

>dbj|AB016870.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15I22
          Length = 59648

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 584   gaaaccggcaaagcaccagaag 605
             ||||||||||||||||||||||
Sbjct: 31021 gaaaccggcaaagcaccagaag 31000



to top

>gb|AY112376.1| Zea mays CL41055_1 mRNA sequence
          Length = 823

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 204 atctcatccatgctgctatagctctctattatcagtttcctc 245
           ||||| ||||||||||||||  |||| |||||||| ||||||
Sbjct: 626 atctcgtccatgctgctatacttctcaattatcagcttcctc 667



to top

>gb|U37336.1|ATU37336 Arabidopsis thaliana senescence-specific protein (SAG12) gene,
            promoter region and complete cds
          Length = 3659

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 584  gaaaccggcaaagcaccagaag 605
            ||||||||||||||||||||||
Sbjct: 2578 gaaaccggcaaagcaccagaag 2557



to top

>gb|BT013484.1| Lycopersicon esculentum clone 132167F, mRNA sequence
          Length = 2473

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 652  tcgctcatgccctggcaatagccaatttc 680
            |||||||| ||||||||||| ||||||||
Sbjct: 1601 tcgctcatcccctggcaataaccaatttc 1573



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 95/120 (79%)
 Strand = Plus / Minus

                                                                        
Query: 126  gtcaccactaaatcatgggcgtcgtccaggagcttccaaatgtccagctgcccggccatg 185
            |||||||| || |||||||| || || || |||||||| |  ||||| || || ||||||
Sbjct: 2126 gtcaccaccaagtcatgggcatcatctagaagcttccatacatccagttgaccagccatg 2067

                                                                        
Query: 186  ctgttacagtccctaatgatctcatccatgctgctatagctctctattatcagtttcctc 245
            || |  || ||||| |  || ||||||||||| |||||  ||||||| ||| ||||||||
Sbjct: 2066 ctctggcactcccttaaaatttcatccatgctactatacttctctatgatctgtttcctc 2007



to top

>emb|AL158812.10| Human DNA sequence from clone RP11-157E11 on chromosome 13, complete
              sequence
          Length = 173538

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 151    ccaggagcttccaaatgtcca 171
              |||||||||||||||||||||
Sbjct: 146950 ccaggagcttccaaatgtcca 146930



to top

>gb|AC004048.1|AC004048 Homo sapiens chromosome 4 clone B176A5 map 4q25, complete sequence
          Length = 100427

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 482  gtaaagatggaagtccttggttttt 506
            |||||||||||||||||||| ||||
Sbjct: 4496 gtaaagatggaagtccttggatttt 4472



to top

>dbj|AP001819.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2023H4, complete
             sequence
          Length = 161775

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 482   gtaaagatggaagtccttggttttt 506
             |||||||||||||||||||| ||||
Sbjct: 32179 gtaaagatggaagtccttggatttt 32155



to top

>gb|AC159413.1| Trypanosoma brucei chromosome 7 clone RPCI93-22O10, complete sequence
          Length = 156548

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 639   aggtgcaaggaggtcgctcatgccctggcaatagcc 674
             ||||| |||||  |||||||||||||| ||||||||
Sbjct: 89875 aggtgaaaggatatcgctcatgccctgacaatagcc 89910



to top

>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 639    aggtgcaaggaggtcgctcatgccctggcaatagcc 674
              ||||| |||||  |||||||||||||| ||||||||
Sbjct: 635416 aggtgaaaggatatcgctcatgccctgacaatagcc 635451



to top

>gb|AC159433.1| Trypanosoma brucei chromosome 7 clone RPCI93-28I8, complete sequence
          Length = 153310

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 639    aggtgcaaggaggtcgctcatgccctggcaatagcc 674
              ||||| |||||  |||||||||||||| ||||||||
Sbjct: 122216 aggtgaaaggatatcgctcatgccctgacaatagcc 122251



to top

>gb|AC090890.3| Canis familiaris clone RP81-196D8, complete sequence
          Length = 175287

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    agcttccaaatgtccagctg 175
              ||||||||||||||||||||
Sbjct: 107491 agcttccaaatgtccagctg 107472



to top

>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 171     agctgcccggccatgctgtt 190
               ||||||||||||||||||||
Sbjct: 3295891 agctgcccggccatgctgtt 3295910



to top

>ref|XM_818769.1| Trypanosoma brucei TREU927 clone RPCI93-22O10 GTPase activating
            protein (Tb927.7.2470) partial mRNA
          Length = 2157

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 639  aggtgcaaggaggtcgctcatgccctggcaatagcc 674
            ||||| |||||  |||||||||||||| ||||||||
Sbjct: 1593 aggtgaaaggatatcgctcatgccctgacaatagcc 1558



to top

>emb|CT010515.8| M.truncatula DNA sequence from clone MTH2-146B21 on chromosome 3,
             complete sequence
          Length = 130617

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    agatattgtatataacagac 42
             ||||||||||||||||||||
Sbjct: 22793 agatattgtatataacagac 22774



to top

>ref|XM_809525.1| Trypanosoma cruzi strain CL Brener histone deacetylase
            (Tc00.1047053509395.120) partial mRNA
          Length = 1962

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 605  ggcttcatcgtcttcctcca 624
            ||||||||||||||||||||
Sbjct: 1260 ggcttcatcgtcttcctcca 1241



to top

>emb|AL157388.12| Human DNA sequence from clone RP11-215A21 on chromosome 10 Contains the
             5' end of a novel gene (MGC33215), a ribosomal protein L17
             (rpL23) (RPL17) pseudogene and three CpG islands, complete
             sequence
          Length = 183382

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   cccacatcacctcccacagg 383
             ||||||||||||||||||||
Sbjct: 73276 cccacatcacctcccacagg 73257



to top

>gb|AC023983.11| Homo sapiens chromosome 18, clone RP11-621L6, complete sequence
          Length = 190225

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    atcccagctactcgatcctg 116
             ||||||||||||||||||||
Sbjct: 54051 atcccagctactcgatcctg 54032



to top

>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 660    gccctggcaatagccaattt 679
              ||||||||||||||||||||
Sbjct: 906338 gccctggcaatagccaattt 906319



to top

>gb|AC153849.8| Mus musculus  BAC RP23-97L11 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205220

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 486   agatggaagtccttggtttt 505
             ||||||||||||||||||||
Sbjct: 58237 agatggaagtccttggtttt 58256



to top

>gb|AC079465.5| Homo sapiens chromosome 5 clone CTD-2124P24, complete sequence
          Length = 184585

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 368   catcacctcccacaggctgagggt 391
             ||||| ||||||||||||||||||
Sbjct: 25972 catcagctcccacaggctgagggt 25949



to top

>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    tttttattatcttggagacc 521
              ||||||||||||||||||||
Sbjct: 781948 tttttattatcttggagacc 781929



to top

>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 235     tcagtttcctcttctccagt 254
               ||||||||||||||||||||
Sbjct: 1870429 tcagtttcctcttctccagt 1870448


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,507,713
Number of Sequences: 3902068
Number of extensions: 6507713
Number of successful extensions: 229812
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 229481
Number of HSP's gapped (non-prelim): 325
length of query: 682
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 659
effective length of database: 17,143,297,704
effective search space: 11297433186936
effective search space used: 11297433186936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top