| Clone Name | rbags13l17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017011.1| Zea mays clone EK07D2310H07.c mRNA sequence Length = 1147 Score = 218 bits (110), Expect = 2e-53 Identities = 359/441 (81%), Gaps = 1/441 (0%) Strand = Plus / Minus Query: 259 gtgcagcaccccgttggccacgttggcaaacacctcgcccgccgcctccagcagctcgtc 318 ||||||||||||||| || || ||||||||||||||||| || | |||||||||||| || Sbjct: 940 gtgcagcaccccgttagcgacattggcaaacacctcgccggctgactccagcagctcatc 881 Query: 319 gcgggtgcccgtgtagtgcatcatgctcggcctcgtcaggaacagcgacttggacgccag 378 ||||| | ||||| ||||| | ||| || | || ||||||| |||||||| ||||| Sbjct: 880 acgggtagcagtgtaatgcatgaggctaggacgagtgaggaacaaggacttggaagccag 821 Query: 379 gtcgcccatggagatcgggtcgggcgagcccgaggactgcccgaacgacaccaggaaacc 438 ||||| | | | ||| ||||| || ||| || |||||||| |||||||||||||| || Sbjct: 820 gtcgctcgttgggattgggtcaggtttgcctgacgactgcccaaacgacaccaggaagcc 761 Query: 439 gcggggcgccaggcactccagggatgccttgtatgtgtcctttccaacagaatcatagac 498 ||||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 760 gcgggacgccaagcactccagggaagccttgtatgtatcctttccaacagaatcatagac 701 Query: 499 cacatttacaccttttccacctgtaatctccttgactctggttgcaacatcttcctttgt 558 ||||| ||||||||||| |||||| ||||||||||| | | ||||| || | || Sbjct: 700 gacattgacaccttttcctgatgtaatatccttgactcttgcgacgacatcctcgctagt 641 Query: 559 gtacatgatcacatggtggcatccatctagatgtgcaagtgaggctttctcttcatttga 618 ||| || || ||||||||||||||| || ||| | | |||||| |||| ||| || Sbjct: 640 gtaaattatgggatggtggcatccatcctgagctgcctgagcggctttttcttgattgga 581 Query: 619 aacagttccaatgacagtagcaccaanggcgttcgcccattgacaaaaggagtgacccaa 678 |||||| || |||||||| ||||||| |||||| || ||||| | |||||||||| || | Sbjct: 580 aacagtcccgatgacagtggcaccaagggcgtttgcacattg-ccaaaggagtgagccga 522 Query: 679 ctccaccagcagcagcgtgga 699 | |||||||||||||| |||| Sbjct: 521 caccaccagcagcagcatgga 501
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 198 bits (100), Expect = 2e-47 Identities = 202/235 (85%), Gaps = 1/235 (0%) Strand = Plus / Plus Query: 465 ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 524 |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| | Sbjct: 102273 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 102332 Query: 525 tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 584 |||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 102333 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 102392 Query: 585 ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 644 || | ||| ||| || ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 102393 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 102452 Query: 645 nggcgttcgcccattgacaaaaggagtgacccaactccaccagcagcagcgtgga 699 ||| || |||||||||| |||||||||| ||||| ||||| ||||||||||||| Sbjct: 102453 gggcatttgcccattgac-aaaggagtgatccaaccccaccggcagcagcgtgga 102506 Score = 67.9 bits (34), Expect = 4e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 281 ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 340 |||||||||||||| || |||| |||||||| |||||||||||| | ||||| |||||| Sbjct: 101714 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagtgtaatgcatc 101773 Query: 341 atgctcggcctcgtcaggaacagcgacttg 370 | ||| ||||| || | |||||||||||| Sbjct: 101774 aggctgggccttgttaccaacagcgacttg 101803
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 198 bits (100), Expect = 2e-47 Identities = 202/235 (85%), Gaps = 1/235 (0%) Strand = Plus / Plus Query: 465 ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 524 |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| | Sbjct: 36273 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 36332 Query: 525 tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 584 |||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 36333 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 36392 Query: 585 ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 644 || | ||| ||| || ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 36393 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 36452 Query: 645 nggcgttcgcccattgacaaaaggagtgacccaactccaccagcagcagcgtgga 699 ||| || |||||||||| |||||||||| ||||| ||||| ||||||||||||| Sbjct: 36453 gggcatttgcccattgac-aaaggagtgatccaaccccaccggcagcagcgtgga 36506 Score = 67.9 bits (34), Expect = 4e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 281 ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 340 |||||||||||||| || |||| |||||||| |||||||||||| | ||||| |||||| Sbjct: 35714 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagtgtaatgcatc 35773 Query: 341 atgctcggcctcgtcaggaacagcgacttg 370 | ||| ||||| || | |||||||||||| Sbjct: 35774 aggctgggccttgttaccaacagcgacttg 35803
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 198 bits (100), Expect = 2e-47 Identities = 202/235 (85%), Gaps = 1/235 (0%) Strand = Plus / Minus Query: 465 ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 524 |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| | Sbjct: 22945 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 22886 Query: 525 tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 584 |||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 22885 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 22826 Query: 585 ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 644 || | ||| ||| || ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 22825 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 22766 Query: 645 nggcgttcgcccattgacaaaaggagtgacccaactccaccagcagcagcgtgga 699 ||| || |||||||||| |||||||||| ||||| ||||| ||||||||||||| Sbjct: 22765 gggcatttgcccattgac-aaaggagtgatccaaccccaccggcagcagcgtgga 22712 Score = 67.9 bits (34), Expect = 4e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 281 ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 340 |||||||||||||| || |||| |||||||| |||||||||||| | ||||| |||||| Sbjct: 23504 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagtgtaatgcatc 23445 Query: 341 atgctcggcctcgtcaggaacagcgacttg 370 | ||| ||||| || | |||||||||||| Sbjct: 23444 aggctgggccttgttaccaacagcgacttg 23415
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 198 bits (100), Expect = 2e-47 Identities = 202/235 (85%), Gaps = 1/235 (0%) Strand = Plus / Plus Query: 465 ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 524 |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| | Sbjct: 102273 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 102332 Query: 525 tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 584 |||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 102333 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 102392 Query: 585 ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 644 || | ||| ||| || ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 102393 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 102452 Query: 645 nggcgttcgcccattgacaaaaggagtgacccaactccaccagcagcagcgtgga 699 ||| || |||||||||| |||||||||| ||||| ||||| ||||||||||||| Sbjct: 102453 gggcatttgcccattgac-aaaggagtgatccaaccccaccggcagcagcgtgga 102506 Score = 67.9 bits (34), Expect = 4e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 281 ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 340 |||||||||||||| || |||| |||||||| |||||||||||| | ||||| |||||| Sbjct: 101714 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagtgtaatgcatc 101773 Query: 341 atgctcggcctcgtcaggaacagcgacttg 370 | ||| ||||| || | |||||||||||| Sbjct: 101774 aggctgggccttgttaccaacagcgacttg 101803
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 198 bits (100), Expect = 2e-47 Identities = 202/235 (85%), Gaps = 1/235 (0%) Strand = Plus / Minus Query: 465 ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 524 |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| | Sbjct: 160295 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 160236 Query: 525 tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 584 |||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 160235 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 160176 Query: 585 ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 644 || | ||| ||| || ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 160175 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 160116 Query: 645 nggcgttcgcccattgacaaaaggagtgacccaactccaccagcagcagcgtgga 699 ||| || |||||||||| |||||||||| ||||| ||||| ||||||||||||| Sbjct: 160115 gggcatttgcccattgac-aaaggagtgatccaaccccaccggcagcagcgtgga 160062 Score = 67.9 bits (34), Expect = 4e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 281 ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 340 |||||||||||||| || |||| |||||||| |||||||||||| | ||||| |||||| Sbjct: 160854 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagtgtaatgcatc 160795 Query: 341 atgctcggcctcgtcaggaacagcgacttg 370 | ||| ||||| || | |||||||||||| Sbjct: 160794 aggctgggccttgttaccaacagcgacttg 160765
>dbj|AK069374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012O14, full insert sequence Length = 1280 Score = 198 bits (100), Expect = 2e-47 Identities = 202/235 (85%), Gaps = 1/235 (0%) Strand = Plus / Minus Query: 465 ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 524 |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| | Sbjct: 720 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 661 Query: 525 tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 584 |||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 660 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 601 Query: 585 ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 644 || | ||| ||| || ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 600 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 541 Query: 645 nggcgttcgcccattgacaaaaggagtgacccaactccaccagcagcagcgtgga 699 ||| || |||||||||| |||||||||| ||||| ||||| ||||||||||||| Sbjct: 540 gggcatttgcccattgac-aaaggagtgatccaaccccaccggcagcagcgtgga 487 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 281 ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 340 |||||||||||||| || |||| |||||||| |||||||||||| | | ||| |||||| Sbjct: 904 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagcgtaatgcatc 845 Query: 341 atgctcggcctcgtcaggaacagcgacttg 370 | ||| ||||| || | |||||||||||| Sbjct: 844 aggctgggccttgttaccaacagcgacttg 815
>dbj|AK061143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C09, full insert sequence Length = 1172 Score = 198 bits (100), Expect = 2e-47 Identities = 202/235 (85%), Gaps = 1/235 (0%) Strand = Plus / Minus Query: 465 ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 524 |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| | Sbjct: 725 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 666 Query: 525 tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 584 |||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 665 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 606 Query: 585 ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 644 || | ||| ||| || ||||| |||||||||||||| || |||||||| ||||||| Sbjct: 605 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 546 Query: 645 nggcgttcgcccattgacaaaaggagtgacccaactccaccagcagcagcgtgga 699 ||| || |||||||||| |||||||||| ||||| ||||| ||||||||||||| Sbjct: 545 gggcatttgcccattgac-aaaggagtgatccaaccccaccggcagcagcgtgga 492 Score = 67.9 bits (34), Expect = 4e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 281 ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 340 |||||||||||||| || |||| |||||||| |||||||||||| | ||||| |||||| Sbjct: 909 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagtgtaatgcatc 850 Query: 341 atgctcggcctcgtcaggaacagcgacttg 370 | ||| ||||| || | |||||||||||| Sbjct: 849 aggctgggccttgttaccaacagcgacttg 820
>gb|AY112167.1| Zea mays CL15172_1 mRNA sequence Length = 996 Score = 196 bits (99), Expect = 7e-47 Identities = 234/279 (83%) Strand = Plus / Plus Query: 259 gtgcagcaccccgttggccacgttggcaaacacctcgcccgccgcctccagcagctcgtc 318 ||||||||||||||| || || ||||||||||||||||| || | |||||||||||| || Sbjct: 613 gtgcagcaccccgttagcgacattggcaaacacctcgccggctgactccagcagctcatc 672 Query: 319 gcgggtgcccgtgtagtgcatcatgctcggcctcgtcaggaacagcgacttggacgccag 378 ||||| | ||||| ||||| | ||| || | || ||||||| |||||||| ||||| Sbjct: 673 acgggtagcagtgtaatgcatgaggctaggacgagtgaggaacaaggacttggaagccag 732 Query: 379 gtcgcccatggagatcgggtcgggcgagcccgaggactgcccgaacgacaccaggaaacc 438 ||||| | | | ||| ||||| || ||| || |||||||| |||||||||||||| || Sbjct: 733 gtcgctcgttgggattgggtcaggtttgcctgacgactgcccaaacgacaccaggaagcc 792 Query: 439 gcggggcgccaggcactccagggatgccttgtatgtgtcctttccaacagaatcatagac 498 ||||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 793 gcgggacgccaagcactccagggaagccttgtatgtatcctttccaacagaatcatagac 852 Query: 499 cacatttacaccttttccacctgtaatctccttgactct 537 ||||| ||||||||||| |||||| ||||||||||| Sbjct: 853 gacattgacaccttttcctgatgtaatatccttgactct 891
>ref|NM_197745.1| Oryza sativa (japonica cultivar-group) putative quinone oxidoreductase (OSJNBa0042H09.11), mRNA Length = 1014 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 290 acctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatcatgctcggc 349 |||||||| || || | ||||||||||||||||||| | ||||||||| |||| | ||| Sbjct: 863 acctcgccggcggcgtgcagcagctcgtcgcgggtggcggtgtagtgcctcatccctggc 804 Query: 350 ctcgtcaggaacagcgacttggacgccag 378 || || || ||| |||||||||||||| Sbjct: 803 ctgcccaagatcagggacttggacgccag 775
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Plus Query: 290 acctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatcatgctcggc 349 |||||||| || || | ||||||||||||||||||| | ||||||||| |||| | ||| Sbjct: 9868 acctcgccggcggcgtgcagcagctcgtcgcgggtggcggtgtagtgcctcatccctggc 9927 Query: 350 ctcgtcaggaacagcgacttggacgccag 378 || || || ||| |||||||||||||| Sbjct: 9928 ctgcccaagatcagggacttggacgccag 9956
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 290 acctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatcatgctcggc 349 |||||||| || || | ||||||||||||||||||| | ||||||||| |||| | ||| Sbjct: 32093 acctcgccggcggcgtgcagcagctcgtcgcgggtggcggtgtagtgcctcatccctggc 32034 Query: 350 ctcgtcaggaacagcgacttggacgccag 378 || || || ||| |||||||||||||| Sbjct: 32033 ctgcccaagatcagggacttggacgccag 32005
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 290 acctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatcatgctcggc 349 |||||||| || || | ||||||||||||||||||| | ||||||||| |||| | ||| Sbjct: 21600189 acctcgccggcggcgtgcagcagctcgtcgcgggtggcggtgtagtgcctcatccctggc 21600130 Query: 350 ctcgtcaggaacagcgacttggacgccag 378 || || || ||| |||||||||||||| Sbjct: 21600129 ctgcccaagatcagggacttggacgccag 21600101
>dbj|AK110882.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-G10, full insert sequence Length = 1832 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 290 acctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatcatgctcggc 349 |||||||| || || | ||||||||||||||||||| | ||||||||| |||| | ||| Sbjct: 1379 acctcgccggcggcgtgcagcagctcgtcgcgggtggcggtgtagtgcctcatccctggc 1320 Query: 350 ctcgtcaggaacagcgacttggacgccag 378 || || || ||| |||||||||||||| Sbjct: 1319 ctgcccaagatcagggacttggacgccag 1291
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 290 acctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatcatgctcggc 349 |||||||| || || | ||||||||||||||||||| | ||||||||| |||| | ||| Sbjct: 21611852 acctcgccggcggcgtgcagcagctcgtcgcgggtggcggtgtagtgcctcatccctggc 21611793 Query: 350 ctcgtcaggaacagcgacttggacgccag 378 || || || ||| |||||||||||||| Sbjct: 21611792 ctgcccaagatcagggacttggacgccag 21611764
>ref|NM_125544.3| Arabidopsis thaliana oxidoreductase/ zinc ion binding AT5G61510 mRNA, complete cds Length = 1383 Score = 48.1 bits (24), Expect = 0.040 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 620 acagttccaatgacagtagcaccaanggcgttcgcccattgacaaaaggagtgacccaac 679 ||||||||||| ||||| || |||| || || ||||||||||| || || |||||||| Sbjct: 784 acagttccaatcacagtggctccaagcgcatttgcccattgacacaac-agagacccaac 726 Query: 680 tccaccagcagcagc 694 ||||||||| ||||| Sbjct: 725 tccaccagctgcagc 711 Score = 44.1 bits (22), Expect = 0.62 Identities = 91/114 (79%) Strand = Plus / Minus Query: 473 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 532 ||||| ||||| ||||| ||||| || |||||||| ||||| || |||||| || ||| Sbjct: 931 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 872 Query: 533 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 586 |||| || ||| ||| || || ||||||| || |||||||||||||||||| Sbjct: 871 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 818
>emb|AL096863.13|HS1119I23 Human DNA sequence from clone RP5-1119I23 on chromosome 10, complete sequence Length = 98818 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 604 tttctcttcatttgaaacagttcc 627 |||||||||||||||||||||||| Sbjct: 92090 tttctcttcatttgaaacagttcc 92067
>emb|BX829585.1|CNS0A17R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB22ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1315 Score = 48.1 bits (24), Expect = 0.040 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 620 acagttccaatgacagtagcaccaanggcgttcgcccattgacaaaaggagtgacccaac 679 ||||||||||| ||||| || |||| || || ||||||||||| || || |||||||| Sbjct: 784 acagttccaatcacagtggctccaagcgcatttgcccattgacacaac-agagacccaac 726 Query: 680 tccaccagcagcagc 694 ||||||||| ||||| Sbjct: 725 tccaccagctgcagc 711 Score = 44.1 bits (22), Expect = 0.62 Identities = 91/114 (79%) Strand = Plus / Minus Query: 473 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 532 ||||| ||||| ||||| ||||| || |||||||| ||||| || |||||| || ||| Sbjct: 931 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 872 Query: 533 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 586 |||| || ||| ||| || || ||||||| || |||||||||||||||||| Sbjct: 871 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 818
>emb|BX832833.1|CNS0A0KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL15ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1259 Score = 48.1 bits (24), Expect = 0.040 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 620 acagttccaatgacagtagcaccaanggcgttcgcccattgacaaaaggagtgacccaac 679 ||||||||||| ||||| || |||| || || ||||||||||| || || |||||||| Sbjct: 694 acagttccaatcacagtggctccaagcgcatttgcccattgacacaac-agagacccaac 636 Query: 680 tccaccagcagcagc 694 ||||||||| ||||| Sbjct: 635 tccaccagctgcagc 621 Score = 44.1 bits (22), Expect = 0.62 Identities = 91/114 (79%) Strand = Plus / Minus Query: 473 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 532 ||||| ||||| ||||| ||||| || |||||||| ||||| || |||||| || ||| Sbjct: 841 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 782 Query: 533 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 586 |||| || ||| ||| || || ||||||| || |||||||||||||||||| Sbjct: 781 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 728
>emb|BX830697.1|CNS0A0OC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS15ZE06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1225 Score = 48.1 bits (24), Expect = 0.040 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 620 acagttccaatgacagtagcaccaanggcgttcgcccattgacaaaaggagtgacccaac 679 ||||||||||| ||||| || |||| || || ||||||||||| || || |||||||| Sbjct: 667 acagttccaatcacagtggctccaagcgcatttgcccattgacacaac-agagacccaac 609 Query: 680 tccaccagcagcagc 694 ||||||||| ||||| Sbjct: 608 tccaccagctgcagc 594 Score = 44.1 bits (22), Expect = 0.62 Identities = 91/114 (79%) Strand = Plus / Minus Query: 473 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 532 ||||| ||||| ||||| ||||| || |||||||| ||||| || |||||| || ||| Sbjct: 814 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 755 Query: 533 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 586 |||| || ||| ||| || || ||||||| || |||||||||||||||||| Sbjct: 754 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 701
>emb|BX830690.1|CNS0A0QY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZE11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1278 Score = 48.1 bits (24), Expect = 0.040 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 620 acagttccaatgacagtagcaccaanggcgttcgcccattgacaaaaggagtgacccaac 679 ||||||||||| ||||| || |||| || || ||||||||||| || || |||||||| Sbjct: 730 acagttccaatcacagtggctccaagcgcatttgcccattgacacaac-agagacccaac 672 Query: 680 tccaccagcagcagc 694 ||||||||| ||||| Sbjct: 671 tccaccagctgcagc 657 Score = 44.1 bits (22), Expect = 0.62 Identities = 91/114 (79%) Strand = Plus / Minus Query: 473 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 532 ||||| ||||| ||||| ||||| || |||||||| ||||| || |||||| || ||| Sbjct: 877 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 818 Query: 533 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 586 |||| || ||| ||| || || ||||||| || |||||||||||||||||| Sbjct: 817 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 764
>gb|BT004198.1| Arabidopsis thaliana clone RAFL15-28-A20 (R20893) putative quinone oxidoreductase (At5g61510) mRNA, complete cds Length = 1061 Score = 48.1 bits (24), Expect = 0.040 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 620 acagttccaatgacagtagcaccaanggcgttcgcccattgacaaaaggagtgacccaac 679 ||||||||||| ||||| || |||| || || ||||||||||| || || |||||||| Sbjct: 554 acagttccaatcacagtggctccaagcgcatttgcccattgacacaac-agagacccaac 496 Query: 680 tccaccagcagcagc 694 ||||||||| ||||| Sbjct: 495 tccaccagctgcagc 481 Score = 44.1 bits (22), Expect = 0.62 Identities = 91/114 (79%) Strand = Plus / Minus Query: 473 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 532 ||||| ||||| ||||| ||||| || |||||||| ||||| || |||||| || ||| Sbjct: 701 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 642 Query: 533 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 586 |||| || ||| ||| || || ||||||| || |||||||||||||||||| Sbjct: 641 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 588
>gb|AY087625.1| Arabidopsis thaliana clone 37197 mRNA, complete sequence Length = 1313 Score = 48.1 bits (24), Expect = 0.040 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 620 acagttccaatgacagtagcaccaanggcgttcgcccattgacaaaaggagtgacccaac 679 ||||||||||| ||||| || |||| || || ||||||||||| || || |||||||| Sbjct: 747 acagttccaatcacagtggctccaagcgcatttgcccattgacacaac-agagacccaac 689 Query: 680 tccaccagcagcagc 694 ||||||||| ||||| Sbjct: 688 tccaccagctgcagc 674 Score = 44.1 bits (22), Expect = 0.62 Identities = 91/114 (79%) Strand = Plus / Minus Query: 473 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 532 ||||| ||||| ||||| ||||| || |||||||| ||||| || |||||| || ||| Sbjct: 894 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 835 Query: 533 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 586 |||| || ||| ||| || || ||||||| || |||||||||||||||||| Sbjct: 834 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 781
>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9 Length = 69142 Score = 48.1 bits (24), Expect = 0.040 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 620 acagttccaatgacagtagcaccaanggcgttcgcccattgacaaaaggagtgacccaac 679 ||||||||||| ||||| || |||| || || ||||||||||| || || |||||||| Sbjct: 12202 acagttccaatcacagtggctccaagcgcatttgcccattgacacaac-agagacccaac 12260 Query: 680 tccaccagcagcagc 694 ||||||||| ||||| Sbjct: 12261 tccaccagctgcagc 12275 Score = 44.1 bits (22), Expect = 0.62 Identities = 91/114 (79%) Strand = Plus / Plus Query: 473 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 532 ||||| ||||| ||||| ||||| || |||||||| ||||| || |||||| || ||| Sbjct: 12055 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 12114 Query: 533 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 586 |||| || ||| ||| || || ||||||| || |||||||||||||||||| Sbjct: 12115 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 12168
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 291 cctcgcccgccgcctccagcagc 313 ||||||||||||||||||||||| Sbjct: 4938237 cctcgcccgccgcctccagcagc 4938259 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 673 acccaactccaccagcagca 692 |||||||||||||||||||| Sbjct: 3003971 acccaactccaccagcagca 3003990
>gb|AC116903.3| Homo sapiens chromosome 15, clone RP11-152L20, complete sequence Length = 159893 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acagacagataagaggaatcag 36 |||||||||||||||||||||| Sbjct: 121299 acagacagataagaggaatcag 121278
>gb|AC005319.1|AC005319 Human Chromosome 15q26.1 PAC clone pDJ430i19, complete sequence Length = 118741 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 acagacagataagaggaatcag 36 |||||||||||||||||||||| Sbjct: 40499 acagacagataagaggaatcag 40478
>ref|NM_001031354.1| Gallus gallus nicalin homolog (zebrafish) (NCLN), mRNA Length = 2928 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 287 aacacctcgcccgccgcctccagca 311 ||||||||||||||| ||||||||| Sbjct: 79 aacacctcgcccgcctcctccagca 55
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 300 ccgcctccagcagctcgtcgcgggtgccc 328 ||||| |||||||||||||| |||||||| Sbjct: 702474 ccgccaccagcagctcgtcgtgggtgccc 702446
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 ccagcagctcgtcgcgggtgc 326 ||||||||||||||||||||| Sbjct: 1106318 ccagcagctcgtcgcgggtgc 1106338
>emb|BX023297.1|CNS08Q51 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA35CE03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 892 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 676 caactccaccagcagcagcgt 696 ||||||||||||||||||||| Sbjct: 639 caactccaccagcagcagcgt 619
>emb|AL713915.10| Mouse DNA sequence from clone RP23-437C4 on chromosome 11 Contains part of the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila), complete sequence Length = 201133 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 441 ggggcgccaggcactccagggatgc 465 ||||| ||||||||||||||||||| Sbjct: 192385 ggggcaccaggcactccagggatgc 192409
>emb|AJ720462.1| Gallus gallus mRNA for hypothetical protein, clone 18d18 Length = 2928 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 287 aacacctcgcccgccgcctccagca 311 ||||||||||||||| ||||||||| Sbjct: 79 aacacctcgcccgcctcctccagca 55
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 280 gttggcaaacacctcgcccgccgcc 304 |||||||||| |||||||||||||| Sbjct: 386806 gttggcaaactcctcgcccgccgcc 386830
>gb|AC153939.3| Mus musculus 10 BAC RP24-173I5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 145018 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 tgtggattgtagagcacaaac 100 ||||||||||||||||||||| Sbjct: 125066 tgtggattgtagagcacaaac 125086
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 298 cgccgcctccagcagctcgtcgcgg 322 |||||||||||||| |||||||||| Sbjct: 4611889 cgccgcctccagcacctcgtcgcgg 4611865
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 gaccccgaggtcttccgggcc 199 ||||||||||||||||||||| Sbjct: 1363152 gaccccgaggtcttccgggcc 1363132
>ref|XM_320805.2| Anopheles gambiae str. PEST ENSANGP00000004780 (ENSANGG00000003729), partial mRNA Length = 2895 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 676 caactccaccagcagcagcgt 696 ||||||||||||||||||||| Sbjct: 162 caactccaccagcagcagcgt 142
>dbj|D15073.1|XANHEMA Xanthomonas campestris pv. phaseoli hemA gene for glutamyl-tRNA reductase, complete cds Length = 1549 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 ccagcagctcgtcgcgggtgc 326 ||||||||||||||||||||| Sbjct: 1268 ccagcagctcgtcgcgggtgc 1248
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 301 cgcctccagcagctcgtcgcgggtg 325 ||||||||||||||| ||||||||| Sbjct: 3723564 cgcctccagcagctcctcgcgggtg 3723588 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 675 ccaactccaccagcagcagc 694 |||||||||||||||||||| Sbjct: 3977377 ccaactccaccagcagcagc 3977358 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cgcccgccgcctccagcagc 313 |||||||||||||||||||| Sbjct: 1521881 cgcccgccgcctccagcagc 1521862
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 gaccccgaggtcttccgggcc 199 ||||||||||||||||||||| Sbjct: 1039588 gaccccgaggtcttccgggcc 1039568
>gb|AC152980.2| Mus musculus 10 BAC RP23-462F3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 165602 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 tgtggattgtagagcacaaac 100 ||||||||||||||||||||| Sbjct: 130961 tgtggattgtagagcacaaac 130941
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 cacctcgcccgccgcctcca 308 |||||||||||||||||||| Sbjct: 2718068 cacctcgcccgccgcctcca 2718087
>gb|DQ211890.1| Planotortrix notophaea actin gene, partial cds Length = 965 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccgccgcctccagcagctcg 316 |||||||||||||||||||| Sbjct: 623 ccgccgcctccagcagctcg 642
>gb|DQ211889.1| Planotortrix octo actin gene, partial cds Length = 962 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccgccgcctccagcagctcg 316 |||||||||||||||||||| Sbjct: 620 ccgccgcctccagcagctcg 639
>gb|DQ211888.1| Planotortrix excessana actin gene, partial cds Length = 965 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccgccgcctccagcagctcg 316 |||||||||||||||||||| Sbjct: 623 ccgccgcctccagcagctcg 642
>gb|DQ211887.1| Ctenopseustis obliquana actin gene, partial cds Length = 958 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccgccgcctccagcagctcg 316 |||||||||||||||||||| Sbjct: 623 ccgccgcctccagcagctcg 642
>gb|DQ211886.1| Ctenopseustis herana actin gene, partial cds Length = 964 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccgccgcctccagcagctcg 316 |||||||||||||||||||| Sbjct: 622 ccgccgcctccagcagctcg 641
>gb|AY540995.1| Achromobacter xylosoxidans subsp. denitrificans strain EST4002 plasmid pEST4011, complete sequence Length = 76958 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 gccgcctccagcagctcgtc 318 |||||||||||||||||||| Sbjct: 72235 gccgcctccagcagctcgtc 72254
>gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence Length = 114045 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 tgtgcagcaccccgttggcc 277 |||||||||||||||||||| Sbjct: 94142 tgtgcagcaccccgttggcc 94161
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 256 ggtgtgcagcaccccgttggccacgttg 283 ||||||||||||| ||||||| |||||| Sbjct: 5382285 ggtgtgcagcaccacgttggcgacgttg 5382312
>gb|AC018491.9| Drosophila melanogaster clone BACR11H15, complete sequence Length = 177953 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 675 ccaactccaccagcagcagc 694 |||||||||||||||||||| Sbjct: 139051 ccaactccaccagcagcagc 139070
>gb|AE002122.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 23 of 59 of the complete genome Length = 20866 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 tcatttgaaacagttccaat 630 |||||||||||||||||||| Sbjct: 8084 tcatttgaaacagttccaat 8065
>gb|AC124181.3| Mus musculus BAC clone RP23-204B12 from chromosome 18, complete sequence Length = 220244 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 agatgcaactccaactcctg 61 |||||||||||||||||||| Sbjct: 93053 agatgcaactccaactcctg 93072
>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene cluster, complete sequence Length = 84868 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccgccgcctccagcagctcg 316 |||||||||||||||||||| Sbjct: 43145 ccgccgcctccagcagctcg 43164
>ref|XM_754931.1| Ustilago maydis 521 hypothetical protein (UM03877.1) partial mRNA Length = 3063 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgccgcctccagcagctcgt 317 |||||||||||||||||||| Sbjct: 2228 cgccgcctccagcagctcgt 2247
>ref|XM_650906.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (19.t00053) partial mRNA Length = 3666 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 603 ctttctcttcatttgaaacagttccaat 630 |||| |||||||||||||||||| |||| Sbjct: 3112 ctttttcttcatttgaaacagtttcaat 3085
>gb|AC148448.3| Pan troglodytes chromosome X clone PTB-007I07 map human ortholog q22.1, complete sequence Length = 44375 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 agacagacagataagaggaa 32 |||||||||||||||||||| Sbjct: 4142 agacagacagataagaggaa 4123
>emb|AL138826.15| Human DNA sequence from clone RP11-156F16 on chromosome 6p11.1-12.3, complete sequence Length = 62464 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tttattccttcttctcctac 136 |||||||||||||||||||| Sbjct: 7943 tttattccttcttctcctac 7924
>emb|AL109801.14|HSJ738A13 Human DNA sequence from clone RP4-738A13 on chromosome Xq21.31-22.1 Contains the 5' end of the TAF7L gene for TAF7-like RNA polymerase II 50kDa TATA box binding protein (TBP)-associated factor and a CpG island, complete sequence Length = 46775 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 agacagacagataagaggaa 32 |||||||||||||||||||| Sbjct: 39988 agacagacagataagaggaa 39969
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cagatgcaactccaactcctgcca 64 ||||||||||| |||||||||||| Sbjct: 214793 cagatgcaacttcaactcctgcca 214816
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 acctcgcccgccgcctccag 309 |||||||||||||||||||| Sbjct: 201653 acctcgcccgccgcctccag 201634
>emb|AJ519536.1|MSE519536 Manduca sexta mRNA for non-muscle actin (act3 gene) Length = 1466 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccgccgcctccagcagctcg 316 |||||||||||||||||||| Sbjct: 760 ccgccgcctccagcagctcg 779
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 256 ggtgtgcagcaccccgttggccacgttg 283 ||||||||| ||| |||||||||||||| Sbjct: 5997977 ggtgtgcagtaccacgttggccacgttg 5998004
>ref|NM_134527.1| Drosophila melanogaster CG15322-RA (CG15322), mRNA Length = 2217 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 675 ccaactccaccagcagcagc 694 |||||||||||||||||||| Sbjct: 1071 ccaactccaccagcagcagc 1090
>gb|AC103586.3| Homo sapiens chromosome 3 clone RP11-79P21, complete sequence Length = 174912 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 ttcctttgtgtacatgatca 569 |||||||||||||||||||| Sbjct: 53006 ttcctttgtgtacatgatca 53025
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 aacatatttacatgcatgtg 83 |||||||||||||||||||| Sbjct: 27564218 aacatatttacatgcatgtg 27564237
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 aacatatttacatgcatgtg 83 |||||||||||||||||||| Sbjct: 11103922 aacatatttacatgcatgtg 11103903
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ctcgcccgccgcctccagca 311 |||||||||||||||||||| Sbjct: 1726026 ctcgcccgccgcctccagca 1726045
>gb|AC010209.14| Homo sapiens 12 BAC RP11-427C3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191148 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 tcatttgaaacagttccaat 630 |||||||||||||||||||| Sbjct: 37859 tcatttgaaacagttccaat 37840
>gb|AC010200.8| Homo sapiens 12 BAC RP11-575G13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158149 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 tcatttgaaacagttccaat 630 |||||||||||||||||||| Sbjct: 34791 tcatttgaaacagttccaat 34810
>gb|AC092758.3| Papio anubis clone RP41-22J16, complete sequence Length = 171690 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 agacagacagataagaggaa 32 |||||||||||||||||||| Sbjct: 61567 agacagacagataagaggaa 61586
>gb|AC069298.8|AC069298 Homo sapiens chromosome 3 clone RP11-56K23, complete sequence Length = 158073 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 ttcctttgtgtacatgatca 569 |||||||||||||||||||| Sbjct: 90973 ttcctttgtgtacatgatca 90992
>gb|AC073525.25| Homo sapiens 12 BAC RP11-81K13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142475 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 agaatcatagaccacattta 506 |||||||||||||||||||| Sbjct: 115302 agaatcatagaccacattta 115283
>dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_E11 Length = 133524 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 aacatatttacatgcatgtg 83 |||||||||||||||||||| Sbjct: 86616 aacatatttacatgcatgtg 86597
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 aacatatttacatgcatgtg 83 |||||||||||||||||||| Sbjct: 23101 aacatatttacatgcatgtg 23082
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 aacatatttacatgcatgtg 83 |||||||||||||||||||| Sbjct: 46508 aacatatttacatgcatgtg 46527
>ref|XM_559635.1| Anopheles gambiae str. PEST ENSANGP00000026822 (ENSANGG00000021887), partial mRNA Length = 4320 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 675 ccaactccaccagcagcagcgtgg 698 ||||| |||||||||||||||||| Sbjct: 1938 ccaacaccaccagcagcagcgtgg 1961
>gb|AE002611.5| Drosophila melanogaster chromosome X, section 66 of 74 of the complete sequence Length = 297848 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 675 ccaactccaccagcagcagc 694 |||||||||||||||||||| Sbjct: 229913 ccaactccaccagcagcagc 229932
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 679 ctccaccagcagcagcgtgg 698 |||||||||||||||||||| Sbjct: 778814 ctccaccagcagcagcgtgg 778795
>emb|BX000474.13| Mouse DNA sequence from clone RP24-80C21 on chromosome 2, complete sequence Length = 205184 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 caggcactccagggatgcct 467 |||||||||||||||||||| Sbjct: 166812 caggcactccagggatgcct 166831
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 aacatatttacatgcatgtg 83 |||||||||||||||||||| Sbjct: 5055272 aacatatttacatgcatgtg 5055253
>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10, ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and ORF19 Length = 86080 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccgccgcctccagcagctcg 316 |||||||||||||||||||| Sbjct: 43063 ccgccgcctccagcagctcg 43082
>gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, complete sequence Length = 99448 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 gccgcctccagcagctcgtc 318 |||||||||||||||||||| Sbjct: 44079 gccgcctccagcagctcgtc 44098 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,480,394 Number of Sequences: 3902068 Number of extensions: 6480394 Number of successful extensions: 125523 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 123947 Number of HSP's gapped (non-prelim): 1559 length of query: 704 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 681 effective length of database: 17,143,297,704 effective search space: 11674585736424 effective search space used: 11674585736424 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)