ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13l12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clo... 1049 0.0
2emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clo... 1011 0.0
3gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete ... 712 0.0
4emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clo... 690 0.0
5gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete ... 662 0.0
6emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clo... 630 e-177
7gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete ... 626 e-176
8emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clo... 569 e-159
9gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, comple... 529 e-147
10emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin 504 e-139
11gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, comple... 303 4e-79
12dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds 234 3e-58
13dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds 143 8e-31
14dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, compl... 88 4e-14
15dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, compl... 80 1e-11
16emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene 58 4e-05
17emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene 48 0.037
18emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin 48 0.037
19emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene 48 0.037
20gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precur... 48 0.037
21dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3,... 48 0.037
22gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, com... 44 0.57
23gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, com... 44 0.57
24gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cance... 44 0.57
25gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, co... 44 0.57
26gb|AC125194.4| Mus musculus BAC clone RP23-275K6 from chromosome... 42 2.3
27gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, comple... 42 2.3
28ref|NM_019741.2| Mus musculus solute carrier family 2 (facilitat... 40 8.9
29gb|BC023500.1| Mus musculus solute carrier family 2 (facilitated... 40 8.9
30gb|AY587193.1| Araneus ventricosus flagelliform silk protein-1 (... 40 8.9
31gb|AC110540.7| Mus musculus chromosome 3, clone RP23-105B8, comp... 40 8.9
32emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for gluco... 40 8.9
33emb|BX957307.12| Zebrafish DNA sequence from clone CH211-117E20 ... 40 8.9
34gb|AC116341.2| Homo sapiens chromosome 5 clone RP11-144A5, compl... 40 8.9
35emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in ... 40 8.9
36gb|AC112183.3| Homo sapiens chromosome 5 clone RP11-152F4, compl... 40 8.9
37dbj|AK162928.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 8.9
38dbj|AK029720.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 8.9
39tpg|BK000650.1| TPA: TPA_exp: Mus musculus otopetrin 1 isoform a... 40 8.9
40emb|AL606971.22| Mouse DNA sequence from clone RP23-123I20 on ch... 40 8.9
41gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, p... 40 8.9
42gb|AF161071.1|AF161071 Mus musculus fructose transporter GLUT5 m... 40 8.9
43gb|AC084071.20| Mus musculus strain C57BL/6J chromosome 5 clone ... 40 8.9
44gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, co... 40 8.9
45gb|L25932.1|HUMLBR01 Homo sapiens integral nuclear envelope inne... 40 8.9
46gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferas... 40 8.9

>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4)
          Length = 637

 Score = 1049 bits (529), Expect = 0.0
 Identities = 609/633 (96%), Gaps = 2/633 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cataatatatcc-tggatcttttatattaagcca-gggtacaaatagattcatcgtggcg 58
           |||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 633 cataatatatccatggaacttttatattaagccaagggtacaaatagattcatcgtggcg 574

                                                                       
Query: 59  actcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggcttcca 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 actcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggcttcca 514

                                                                       
Query: 119 tacagctgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaa 178
           ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 513 tacagctgatggtatcaagattattcaagacaaaatgacaatacgaccatggccatagaa 454

                                                                       
Query: 179 atcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattaca 238
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattaca 394

                                                                       
Query: 239 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccacggaa 298
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 393 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaa 334

                                                                       
Query: 299 aacattgtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgac 358
           ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 333 aacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgcgtgac 274

                                                                       
Query: 359 atctggttcaccggattcagggagaagattcagtttaggatagtcactaggacattttga 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| 
Sbjct: 273 atctggttcaccggattcagggagaagattcagtttaggatagtcactagggcattttgg 214

                                                                       
Query: 419 accgcttatgattttacaaccacaagcacctgcacagactggacgggaaccaccggcgaa 478
           ||| |||||||||||||||| |||||||||||| |||||||||||||||||||| |||||
Sbjct: 213 accacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaa 154

                                                                       
Query: 479 acggcaagtgttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccac 538
           | |||||||||||||||||||||| || ||||||  |||||||||||| |||||||||||
Sbjct: 153 atggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccac 94

                                                                       
Query: 539 ctggacctgctccagaactaaacctagtatgagaacacaaatgaccacactcttaatact 598
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 93  ctggacctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaatact 34

                                            
Query: 599 cttactgggtgccatggttggcttgttggcttt 631
           ||| |||||||||||||||||||| ||||||||
Sbjct: 33  cttgctgggtgccatggttggcttcttggcttt 1



to top

>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4)
          Length = 658

 Score = 1011 bits (510), Expect = 0.0
 Identities = 608/638 (95%), Gaps = 2/638 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cataatatatcc-tggatcttttatattaagcca-gggtacaaatagattcatcgtggcg 58
           |||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 640 cataatatatccatggaacttttatattaagccaagggtacaaatagattcatcgtggcg 581

                                                                       
Query: 59  actcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggcttcca 118
           || ||||||||||||||||||||| | |||| ||||||||||||||||||||  |||| |
Sbjct: 580 acccttattggaacaagggaaaaacagaaatgcataagtaagatgatacatttccttcga 521

                                                                       
Query: 119 tacagctgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaa 178
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 520 tacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaa 461

                                                                       
Query: 179 atcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattaca 238
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 atcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattaca 401

                                                                       
Query: 239 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccacggaa 298
            |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 400 aaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaa 341

                                                                       
Query: 299 aacattgtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgac 358
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgac 281

                                                                       
Query: 359 atctggttcaccggattcagggagaagattcagtttaggatagtcactaggacattttga 418
           |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| 
Sbjct: 280 atctggttcaccggattcagggagaagattaagtttaggatagtcactagggcattttgg 221

                                                                       
Query: 419 accgcttatgattttacaaccacaagcacctgcacagactggacgggaaccaccggcgaa 478
           ||| |||||||||||||||| |||||||||||| |||||||||||||||||||| |||||
Sbjct: 220 accacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaa 161

                                                                       
Query: 479 acggcaagtgttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccac 538
           |||||||||||||||||||||||| || ||||||  |||||||||||| |||||||||||
Sbjct: 160 acggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccac 101

                                                                       
Query: 539 ctggacctgctccagaactaaacctagtatgagaacacaaatgaccacactcttaatact 598
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 100 ctggacctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaatact 41

                                                 
Query: 599 cttactgggtgccatggttggcttgttggctttaattt 636
           ||| |||||||||||||||||||| |||||||||||||
Sbjct: 40  cttgctgggtgccatggttggcttcttggctttaattt 3



to top

>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940
          Length = 663

 Score =  712 bits (359), Expect = 0.0
 Identities = 585/655 (89%), Gaps = 4/655 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cataatatatcc-tggatcttttatattaagcca-gggtacaaatagattcatcgtggcg 58
           |||||||||||| |||| |||||||||||||||| ||||| |||||||||||||||||  
Sbjct: 658 cataatatatccatggaacttttatattaagccaagggtataaatagattcatcgtgggt 599

                                                                       
Query: 59  actcttattggaacaagggaaaaag-acaaatacataagtaagatgatacattggcttcc 117
            ||||||||||||| |||||||||  | |||||||||| |||||||||||||| ||||| 
Sbjct: 598 tctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcg 539

                                                                       
Query: 118 atacagctgatggtatcaagattattcaagacaaaatgactatacgaccttggccataga 177
           || | | |||||||||||||||| || || | |||||||| | |||||||||||||||||
Sbjct: 538 at-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 480

                                                                       
Query: 178 aatcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattac 237
           |||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 479 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattac 420

                                                                       
Query: 238 agaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccacgga 297
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| 
Sbjct: 419 agaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggg 360

                                                                       
Query: 298 aaacattgtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtga 357
           |||||||||||| |||||||||||| ||| ||| ||||||||| |||||||||| |||  
Sbjct: 359 aaacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcg 300

                                                                       
Query: 358 catctggttcaccggattcagggagaagattcagtttaggatagtcactaggacattttg 417
           ||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||
Sbjct: 299 catttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttg 240

                                                                       
Query: 418 aaccgcttatgattttacaaccacaagcacctgcacagactggacgggaaccaccggcga 477
             |||||||||||||||||||||||||||  ||| |||||||| ||||||||||| ||||
Sbjct: 239 ggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcga 180

                                                                       
Query: 478 aacggcaagtgttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctcca 537
           ||||||| | |||||||||||||||| |   |||| ||||||||||||||||  | || |
Sbjct: 179 aacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttcta 120

                                                                       
Query: 538 cctggacctgctccagaactaaacctagtatgagaacacaaatgaccacactcttaatac 597
           | ||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||
Sbjct: 119 cttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatac 60

                                                                  
Query: 598 tcttactgggtgccatggttggcttgttggctttaatttctccagaagaatgaga 652
           ||||  ||| |||||||||||||| |||||| |||||||||| || |||||||||
Sbjct: 59  tcttgttggttgccatggttggctggttggccttaatttctcaagtagaatgaga 5



to top

>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2)
          Length = 453

 Score =  690 bits (348), Expect = 0.0
 Identities = 418/440 (95%), Gaps = 1/440 (0%)
 Strand = Plus / Minus

                                                                       
Query: 20  tttatattaagcca-gggtacaaatagattcatcgtggcgactcttattggaacaaggga 78
           |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 440 tttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaaggga 381

                                                                       
Query: 79  aaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtatcaaga 138
           |||| | |||| ||||||||||||||||||||  |||| |||||||||||||||||||||
Sbjct: 380 aaaacagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaaga 321

                                                                       
Query: 139 ttattcaagacaaaatgactatacgaccttggccatagaaatcatgcacaagaacgcatg 198
           ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 320 ttattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcatg 261

                                                                       
Query: 199 attaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgc 258
           |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 260 attaggattcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcgttgc 201

                                                                       
Query: 259 tgcagagtcccatgtcgaatttcatcttttggccacggaaaacattgtccacgttgtcac 318
           ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||
Sbjct: 200 tgcagagtcccatgtcgaatttcatctcttggccatggaaaacattgtccatgttgtcac 141

                                                                       
Query: 319 agacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcag 378
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 140 agacagaattcctgcatccaatggtgcagtactgagtgacatcgggttcaccggattcag 81

                                                                       
Query: 379 ggagaagattcagtttaggatagtcactaggacattttgaaccgcttatgattttacaac 438
           |||||||||| |||||||||||||||||||| ||||||| ||| ||||||||||||||||
Sbjct: 80  ggagaagattaagtttaggatagtcactagggcattttggaccacttatgattttacaac 21

                               
Query: 439 cacaagcacctgcacagact 458
            |||||||||||| ||||||
Sbjct: 20  gacaagcacctgcgcagact 1



to top

>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348
          Length = 608

 Score =  662 bits (334), Expect = 0.0
 Identities = 531/594 (89%), Gaps = 2/594 (0%)
 Strand = Plus / Minus

                                                                       
Query: 60  ctcttattggaacaagggaaaaag-acaaatacataagtaagatgatacattggcttcca 118
           ||||||||||||| |||||||||  | |||||||||| |||||||||||||| ||||| |
Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538

                                                                       
Query: 119 tacagctgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaa 178
           | | | |||||||||||||||| || || | |||||||| | ||||||||||||||||||
Sbjct: 537 t-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaa 479

                                                                       
Query: 179 atcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattaca 238
           ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 478 atcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattaca 419

                                                                       
Query: 239 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccacggaa 298
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 418 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggga 359

                                                                       
Query: 299 aacattgtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgac 358
           ||||||||||| |||||||||||| ||| ||| ||||||||| |||||||||| |||  |
Sbjct: 358 aacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgc 299

                                                                       
Query: 359 atctggttcaccggattcagggagaagattcagtttaggatagtcactaggacattttga 418
           || |||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| 
Sbjct: 298 atttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgg 239

                                                                       
Query: 419 accgcttatgattttacaaccacaagcacctgcacagactggacgggaaccaccggcgaa 478
            |||||||||||||||||||||||||||  ||| |||||||| ||||||||||| |||||
Sbjct: 238 gccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaa 179

                                                                       
Query: 479 acggcaagtgttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccac 538
           |||||| | |||||||||||||||| |   |||| ||||||||||||||||  | || ||
Sbjct: 178 acggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctac 119

                                                                       
Query: 539 ctggacctgctccagaactaaacctagtatgagaacacaaatgaccacactcttaatact 598
            ||||||||||||||||||||||| | ||||||||||||||| ||||| |||||||||||
Sbjct: 118 ttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatact 59

                                                                 
Query: 599 cttactgggtgccatggttggcttgttggctttaatttctccagaagaatgaga 652
           |||  ||| |||||||||||||| |||||| |||||||||| || |||||||||
Sbjct: 58  cttgttggttgccatggttggctggttggccttaatttctcaagtagaatgaga 5



to top

>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3)
          Length = 544

 Score =  630 bits (318), Expect = e-177
 Identities = 488/542 (90%), Gaps = 2/542 (0%)
 Strand = Plus / Minus

                                                                       
Query: 40  aaatagattcatcgtggcgactcttattggaacaagggaaaaag-acaaatacataagta 98
           ||||||||||||||||||||||||||||||||| |||||||||  | |||||||||| ||
Sbjct: 544 aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataacta 485

                                                                       
Query: 99  agatgatacattggcttccatacagctgatggtatcaagattattcaagacaaaatgact 158
           |||||||||||| ||||| ||   | |||||||||||||||| || || | |||||||| 
Sbjct: 484 agatgatacatttgcttcgatgtgg-tgatggtatcaagattgttgaacagaaaatgaca 426

                                                                       
Query: 159 atacgaccttggccatagaaatcatgcacaagaacgcatgattaggcttcaacagactga 218
           | ||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||
Sbjct: 425 aaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaagagactga 366

                                                                       
Query: 219 atgactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaat 278
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaat 306

                                                                       
Query: 279 ttcatcttttggccacggaaaacattgtccacgttgtcacagacagaattcctgcatcca 338
           ||||||| |||||||||| |||||||||||| |||||||||||| ||| |||||||||||
Sbjct: 305 ttcatctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatcca 246

                                                                       
Query: 339 atggtgcagtactgagtgacatctggttcaccggattcagggagaagattcagtttagga 398
           || |||||||||| |||  ||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 245 attgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttagga 186

                                                                       
Query: 399 tagtcactaggacattttgaaccgcttatgattttacaaccacaagcacctgcacagact 458
           ||||| ||||||||| |||  |||||||||||||||||||||||||||  ||| ||||||
Sbjct: 185 tagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagact 126

                                                                       
Query: 459 ggacgggaaccaccggcgaaacggcaagtgttgtagcagtttctggcaaacgtggtcttg 518
           || ||||||||||| ||||||||||| | |||||||||||||||| |   |||| |||||
Sbjct: 125 ggtcgggaaccaccagcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttg 66

                                                                       
Query: 519 cagcaactctttccctccacctggacctgctccagaactaaacctagtatgagaacacaa 578
           ||||||||||| || || || ||||||||||||||||||||||| | |||||||||||||
Sbjct: 65  cagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaacacaa 6

             
Query: 579 at 580
           ||
Sbjct: 5   at 4



to top

>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872
          Length = 540

 Score =  626 bits (316), Expect = e-176
 Identities = 475/528 (89%)
 Strand = Plus / Minus

                                                                       
Query: 125 tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 184
           |||||||||||||||| || || | |||||||| | ||||||||||||||||||||||||
Sbjct: 532 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 473

                                                                       
Query: 185 cacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 244
           | |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 472 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 413

                                                                       
Query: 245 ggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccacggaaaacatt 304
           ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 412 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 353

                                                                       
Query: 305 gtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctgg 364
           ||||| |||||||||||| ||| ||| ||||||||| |||||||||| |||  ||| |||
Sbjct: 352 gtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttgg 293

                                                                       
Query: 365 ttcaccggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgct 424
           ||||||||||||||||||||||||||| ||||||||||| ||||||||| |||  |||||
Sbjct: 292 ttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgct 233

                                                                       
Query: 425 tatgattttacaaccacaagcacctgcacagactggacgggaaccaccggcgaaacggca 484
           ||||||||||||||||||||||  ||| |||||||| ||||||||||| |||||||||||
Sbjct: 232 tatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggca 173

                                                                       
Query: 485 agtgttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggac 544
            | |||||||||||||||| |   |||| ||||||||||||||||  | || || |||||
Sbjct: 172 ggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctacttggac 113

                                                                       
Query: 545 ctgctccagaactaaacctagtatgagaacacaaatgaccacactcttaatactcttact 604
           |||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||||  |
Sbjct: 112 ctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgtt 53

                                                           
Query: 605 gggtgccatggttggcttgttggctttaatttctccagaagaatgaga 652
           || |||||||||||||| |||||| |||||||||| || |||||||||
Sbjct: 52  ggttgccatggttggctggttggccttaatttctcaagtagaatgaga 5



to top

>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3)
          Length = 491

 Score =  569 bits (287), Expect = e-159
 Identities = 440/487 (90%), Gaps = 3/487 (0%)
 Strand = Plus / Minus

                                                                       
Query: 13  tggatcttttatattaagcca-gggtacaaatagattcatcgtggcgactcttattggaa 71
           |||| |||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||
Sbjct: 486 tggaacttttatattaagccaagggcataaatagattcatcgtggtgactcttattggaa 427

                                                                       
Query: 72  caagggaaaaag-acaaatacataagtaagatgatacattggcttccatacagctgatgg 130
           | |||||||||  | |||||||||| |||||||||||||| ||||| || | | ||||||
Sbjct: 426 cgagggaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatgg 368

                                                                       
Query: 131 tatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatgcacaag 190
           |||||||||| || || | |||||||  | ||||||||||||||||||||||||| ||||
Sbjct: 367 tatcaagattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgcccaag 308

                                                                       
Query: 191 aacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcaca 250
           || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 307 aaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcaca 248

                                                                       
Query: 251 tgcgttgctgcagagtcccatgtcgaatttcatcttttggccacggaaaacattgtccac 310
           ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| 
Sbjct: 247 tgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccag 188

                                                                       
Query: 311 gttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcacc 370
           |||||||||||| ||| ||||||||||||| |||||||||| |||  ||| |||||||||
Sbjct: 187 gttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcacc 128

                                                                       
Query: 371 ggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgcttatgat 430
           ||||||||||||||||||||| ||||||||||| ||||||||  |||  |||||||||||
Sbjct: 127 ggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttatgat 68

                                                                       
Query: 431 tttacaaccacaagcacctgcacagactggacgggaaccaccggcgaaacggcaagtgtt 490
           ||||||||||||||||  ||| |||||||| ||||||||||||||||||||||| | |||
Sbjct: 67  tttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgtt 8

                  
Query: 491 gtagcag 497
           |||||||
Sbjct: 7   gtagcag 1



to top

>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds
          Length = 2406

 Score =  529 bits (267), Expect = e-147
 Identities = 296/303 (97%), Gaps = 2/303 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    cataatatatcc-tggatcttttatattaagcca-gggtacaaatagattcatcgtggcg 58
            |||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2333 cataatatatccatggaacttttatattaagccaagggtacaaatagattcatcgtggcg 2274

                                                                        
Query: 59   actcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggcttcca 118
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2273 actcttgttggaacaagggaaaaagacaaatacataagtaagatgatacattggcttcca 2214

                                                                        
Query: 119  tacagctgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaa 178
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2213 tacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaa 2154

                                                                        
Query: 179  atcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattaca 238
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2153 atcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattaca 2094

                                                                        
Query: 239  gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccacggaa 298
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2093 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaa 2034

               
Query: 299  aac 301
            |||
Sbjct: 2033 aac 2031



 Score =  446 bits (225), Expect = e-122
 Identities = 270/285 (94%)
 Strand = Plus / Minus

                                                                        
Query: 368  accggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgcttat 427
            |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||
Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717

                                                                        
Query: 428  gattttacaaccacaagcacctgcacagactggacgggaaccaccggcgaaacggcaagt 487
            ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657

                                                                        
Query: 488  gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547
            ||||||||||||||| || ||||||  |||||||||||| ||||||||||||||||||||
Sbjct: 1656 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 1597

                                                                        
Query: 548  ctccagaactaaacctagtatgagaacacaaatgaccacactcttaatactcttactggg 607
            ||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1596 ctccagaactaaaaccagtatgagaacacaaatgaccacactcttaatactcttgctggg 1537

                                                         
Query: 608  tgccatggttggcttgttggctttaatttctccagaagaatgaga 652
            ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1536 tgccatggttggcttcttggctttaatttctccagaagaatgaga 1492



 Score =  123 bits (62), Expect = 8e-25
 Identities = 68/70 (97%)
 Strand = Plus / Minus

                                                                        
Query: 301  cattgtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 360
            ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878

                      
Query: 361  ctggttcacc 370
            ||||||||||
Sbjct: 1877 ctggttcacc 1868



to top

>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin
          Length = 414

 Score =  504 bits (254), Expect = e-139
 Identities = 365/402 (90%)
 Strand = Plus / Minus

                                                                       
Query: 200 ttaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgct 259
           ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355

                                                                       
Query: 260 gcagagtcccatgtcgaatttcatcttttggccacggaaaacattgtccacgttgtcaca 319
           |||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||
Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295

                                                                       
Query: 320 gacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcagg 379
           ||| ||| ||||||||||||| |||||||||| |||  ||| ||||||||||||||||||
Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235

                                                                       
Query: 380 gagaagattcagtttaggatagtcactaggacattttgaaccgcttatgattttacaacc 439
           |||||||||||| ||||||||||| ||||||||| |||  ||||||||||||||||||||
Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175

                                                                       
Query: 440 acaagcacctgcacagactggacgggaaccaccggcgaaacggcaagtgttgtagcagtt 499
           |||||||  ||| |||||||| |||||||||||||||||| |||| | ||||||||||||
Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaatggcaggcgttgtagcagtt 115

                                                                       
Query: 500 tctggcaaacgtggtcttgcagcaactctttccctccacctggacctgctccagaactaa 559
           |||| |   |||| |||||||||||||||| || || || ||||||||||||||||||||
Sbjct: 114 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 55

                                                     
Query: 560 acctagtatgagaacacaaatgaccacactcttaatactctt 601
           ||| | ||||||||||||||| ||||| ||||||||||||||
Sbjct: 54  acccaatatgagaacacaaataaccacgctcttaatactctt 13



to top

>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds
          Length = 2259

 Score =  303 bits (153), Expect = 4e-79
 Identities = 252/285 (88%)
 Strand = Plus / Minus

                                                                        
Query: 368  accggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgcttat 427
            |||||||||||||||||||||||| ||||||||||| ||||||||  |||  ||||||||
Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738

                                                                        
Query: 428  gattttacaaccacaagcacctgcacagactggacgggaaccaccggcgaaacggcaagt 487
            |||||||||||||||||||  ||| |||||||| ||||||||||||||||||||||| | 
Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678

                                                                        
Query: 488  gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547
            |||||||||||||||| |   |||| |||||||||||||||| || || || ||||||||
Sbjct: 1677 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 1618

                                                                        
Query: 548  ctccagaactaaacctagtatgagaacacaaatgaccacactcttaatactcttactggg 607
            ||||||||||||||| | ||||||||||||||| ||||| ||||||||||||||  ||| 
Sbjct: 1617 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 1558

                                                         
Query: 608  tgccatggttggcttgttggctttaatttctccagaagaatgaga 652
            |||||||||||||| |||||| ||||||||||  | |||||||||
Sbjct: 1557 tgccatggttggctggttggccttaatttctcatgtagaatgaga 1513



 Score =  256 bits (129), Expect = 8e-65
 Identities = 165/177 (93%)
 Strand = Plus / Minus

                                                                        
Query: 125  tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 184
            |||||||||||||||| || || | |||||||| | ||||||||||||||||||||||||
Sbjct: 2230 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 2171

                                                                        
Query: 185  cacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 244
            | |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2170 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 2111

                                                                     
Query: 245  ggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccacggaaaac 301
            |||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||
Sbjct: 2110 ggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacgggaaac 2054



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                        
Query: 301  cattgtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 360
            ||||||||| ||||||||| || ||| ||||||||||||| |||||||||| ||| ||||
Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904

                      
Query: 361  ctggttcacc 370
             |||||||||
Sbjct: 1903 ttggttcacc 1894



to top

>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds
          Length = 641

 Score =  234 bits (118), Expect = 3e-58
 Identities = 354/432 (81%), Gaps = 3/432 (0%)
 Strand = Plus / Minus

                                                                       
Query: 163 gaccttggccatagaaatcatgcacaagaacgcatgattaggcttcaacagactgaatga 222
           ||||| ||||| |||||||||||||||||  ||||||||| ||||  | |||  ||||||
Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437

                                                                       
Query: 223 ctgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 282
           | ||||| |  |||||||||||  ||||| | ||| ||||||||  |||||||| |||||
Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377

                                                                       
Query: 283 tcttttggccacggaaaacattgtccacgttgtcacagacagaattcctgcatccaatgg 342
           ||| ||||||| | | ||||||||||| ||||||||| || ||| || ||||||| ||||
Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317

                                                                       
Query: 343 tgcagtactgagtgacatctggttcaccggattcagggagaagattcagtttaggatagt 402
           ||||||||| ||||||||| ||||||||||||||| | ||||||| |||||||| |||| 
Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatagc 257

                                                                       
Query: 403 cactaggacattttgaaccgcttatgattttacaaccacaagcacctgcacagactggac 462
           ||  ||||||| ||   |||  || ||||||||| ||||||  |  ||| |||  ||| |
Sbjct: 256 catcaggacatgtt---ccgtctacgattttacatccacaaagagatgcgcagcgtggcc 200

                                                                       
Query: 463 gggaaccaccggcgaaacggcaagtgttgtagcagtttctggcaaacgtggtcttgcagc 522
           |||||  |||||  ||||||||   ||| ||||||||||| ||| | ||| ||  |||||
Sbjct: 199 gggaagtaccggttaaacggcagacgttatagcagtttcttgcagatgtgctcgggcagc 140

                                                                       
Query: 523 aactctttccctccacctggacctgctccagaactaaacctagtatgagaacacaaatga 582
           ||||||||||||| |||||||||||| |||||||||||||||||| ||| |||||||  |
Sbjct: 139 aactctttccctctacctggacctgccccagaactaaacctagtacgaggacacaaagca 80

                       
Query: 583 ccacactcttaa 594
           |||||| |||||
Sbjct: 79  ccacacacttaa 68



to top

>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds
          Length = 678

 Score =  143 bits (72), Expect = 8e-31
 Identities = 252/312 (80%)
 Strand = Plus / Minus

                                                                       
Query: 311 gttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcacc 370
           ||||||||| || ||| || |||||||||| |||||||||| ||   |||||| ||||||
Sbjct: 384 gttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttcacc 325

                                                                       
Query: 371 ggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgcttatgat 430
           | |||||| |||||||| | |||||||  | ||||| |||||  ||| | ||  || || 
Sbjct: 324 gtattcagagagaagatgctgtttaggccaatcacttggacaagttgtaacgtctaagag 265

                                                                       
Query: 431 tttacaaccacaagcacctgcacagactggacgggaaccaccggcgaaacggcaagtgtt 490
           |||||||||||| | |||||| |||||||| || | | |||| || ||||||||    ||
Sbjct: 264 tttacaaccacatggacctgcgcagactgggcgcggagcaccagctaaacggcagacatt 205

                                                                       
Query: 491 gtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctgctc 550
           |||||||||| | ||   |||| |||||||||||||||| ||||| ||||||||||||||
Sbjct: 204 gtagcagtttattgccgtcgtgctcttgcagcaactcttgccctctacctggacctgctc 145

                                                                       
Query: 551 cagaactaaacctagtatgagaacacaaatgaccacactcttaatactcttactgggtgc 610
           |||||||||||| || ||||| | |||||| ||  ||||||| |||| ||| || |  ||
Sbjct: 144 cagaactaaacccagcatgaggaaacaaataacagcactcttgatacccttgcttgtggc 85

                       
Query: 611 catggttggctt 622
           ||||||||||||
Sbjct: 84  catggttggctt 73



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 111/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 161 acgaccttggccatagaaatcatgcacaagaacgcatgattaggcttcaacagactgaat 220
           |||||| ||||||||||||| | |||| |||  ||||||||||||  | |||||  || |
Sbjct: 549 acgaccatggccatagaaataaggcacgagagtgcatgattaggccccgacagatggatt 490

                                                                       
Query: 221 gactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaattt 280
           ||| ||||| |  |||||||||||| ||||||||||| |||||| |  ||||||||  ||
Sbjct: 489 gacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcatgtcgatgtt 430

                          
Query: 281 catcttttggccacg 295
           ||||| |||||||||
Sbjct: 429 catctcttggccacg 415



to top

>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds
          Length = 616

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                       
Query: 515 cttgcagcaactctttccctccacctggacctgctccagaactaaacctagtatgagaac 574
           ||||||||||||||||||||| || ||||| |||||||||||||  || | ||  |||||
Sbjct: 121 cttgcagcaactctttccctctacttggacatgctccagaactatccccaatacaagaac 62

                               
Query: 575 acaaatgaccacactcttaa 594
           ||||||||||||||||||||
Sbjct: 61  acaaatgaccacactcttaa 42



to top

>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds
          Length = 677

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                       
Query: 515 cttgcagcaactctttccctccacctggacctgctccagaactaaacctagtatgagaac 574
           ||||||||||||||||||||| || |||||||||||||||||||  || | ||  || ||
Sbjct: 122 cttgcagcaactctttccctctacttggacctgctccagaactatccccaatacaaggac 63

                               
Query: 575 acaaatgaccacactcttaa 594
           ||||||||| ||||||||||
Sbjct: 62  acaaatgactacactcttaa 43



to top

>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene
          Length = 897

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                       
Query: 479 acggcaagtgttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccac 538
           |||||||  |||||||||||||||  | |  ||| ||||||||||||||||||| || ||
Sbjct: 141 acggcaaaggttgtagcagtttcttcctagggtgctcttgcagcaactctttccttctac 82

                                            
Query: 539 ctggacctgctccagaactaaacctagtatgag 571
            || ||||| |||||||| || || ||||||||
Sbjct: 81  ttgcacctgttccagaaccaaccccagtatgag 49



to top

>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene
          Length = 892

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 69/84 (82%)
 Strand = Plus / Minus

                                                                       
Query: 488 gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547
           |||||||||||||||  | |  ||| |||||||||||||||| || || || || |||||
Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 73

                                   
Query: 548 ctccagaactaaacctagtatgag 571
            |||||||| || || ||||||||
Sbjct: 72  ttccagaaccaaccccagtatgag 49



to top

>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin
          Length = 641

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 69/84 (82%)
 Strand = Plus / Minus

                                                                       
Query: 488 gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547
           |||||||||||||||  | |  |||||| ||||||||||||| || || || || |||||
Sbjct: 189 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 130

                                   
Query: 548 ctccagaactaaacctagtatgag 571
            |||||||| || || ||||||||
Sbjct: 129 ttccagaaccaaccccagtatgag 106



to top

>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene
          Length = 901

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 69/84 (82%)
 Strand = Plus / Minus

                                                                       
Query: 488 gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547
           |||||||||||||||  | |  |||||| ||||||||||||| || || || || |||||
Sbjct: 132 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 73

                                   
Query: 548 ctccagaactaaacctagtatgag 571
            |||||||| || || ||||||||
Sbjct: 72  ttccagaaccaaccccagtatgag 49



to top

>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds
          Length = 673

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 69/84 (82%)
 Strand = Plus / Minus

                                                                       
Query: 488 gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547
           |||||||||||||||  | |  ||| |||||||||||||||| || || || || |||||
Sbjct: 140 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 81

                                   
Query: 548 ctccagaactaaacctagtatgag 571
            |||||||| || || ||||||||
Sbjct: 80  ttccagaaccaaccccagtatgag 57



to top

>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds
          Length = 915

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 69/84 (82%)
 Strand = Plus / Minus

                                                                       
Query: 488 gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547
           |||||||||||||||  | |  |||||| ||||||||||||| || || || || |||||
Sbjct: 177 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 118

                                   
Query: 548 ctccagaactaaacctagtatgag 571
            |||||||| || || ||||||||
Sbjct: 117 ttccagaaccaaccccagtatgag 94



to top

>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence
          Length = 264425

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 71   acaagggaaaaagacaaataca 92
            ||||||||||||||||||||||
Sbjct: 6908 acaagggaaaaagacaaataca 6887



to top

>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence
          Length = 211521

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 71    acaagggaaaaagacaaataca 92
             ||||||||||||||||||||||
Sbjct: 86367 acaagggaaaaagacaaataca 86346



to top

>gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159706

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 73    aagggaaaaagacaaatacata 94
             ||||||||||||||||||||||
Sbjct: 85293 aagggaaaaagacaaatacata 85272



to top

>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence
          Length = 240821

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 71    acaagggaaaaagacaaataca 92
             ||||||||||||||||||||||
Sbjct: 41781 acaagggaaaaagacaaataca 41802



to top

>gb|AC125194.4| Mus musculus BAC clone RP23-275K6 from chromosome 18, complete sequence
          Length = 155706

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 71     acaagggaaaaagacaaatacataa 95
              |||||||||||||| ||||||||||
Sbjct: 114727 acaagggaaaaagaaaaatacataa 114751



to top

>gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, complete sequence
          Length = 179399

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 71    acaagggaaaaagacaaatacataa 95
             |||||||||||||| ||||||||||
Sbjct: 54540 acaagggaaaaagaaaaatacataa 54564



to top

>ref|NM_019741.2| Mus musculus solute carrier family 2 (facilitated glucose
            transporter), member 5 (Slc2a5), mRNA
          Length = 3097

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 511  tggtcttgcagcaactcttt 530
            ||||||||||||||||||||
Sbjct: 2461 tggtcttgcagcaactcttt 2442



to top

>gb|BC023500.1| Mus musculus solute carrier family 2 (facilitated glucose
            transporter), member 5, mRNA (cDNA clone MGC:32452
            IMAGE:5043284), complete cds
          Length = 2080

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 511  tggtcttgcagcaactcttt 530
            ||||||||||||||||||||
Sbjct: 1836 tggtcttgcagcaactcttt 1817



to top

>gb|AY587193.1| Araneus ventricosus flagelliform silk protein-1 (Ff1) mRNA, partial
           cds
          Length = 1836

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 ctccacctggacctgctcca 552
           ||||||||||||||||||||
Sbjct: 410 ctccacctggacctgctcca 391



to top

>gb|AC110540.7| Mus musculus chromosome 3, clone RP23-105B8, complete sequence
          Length = 232416

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      tatcctggatcttttatatt 27
              ||||||||||||||||||||
Sbjct: 124900 tatcctggatcttttatatt 124881



to top

>emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for glucosyltransferase I and
            glucosyltransferase S
          Length = 10125

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  tacagctgatggtatcaaga 138
            ||||||||||||||||||||
Sbjct: 2450 tacagctgatggtatcaaga 2469



to top

>emb|BX957307.12| Zebrafish DNA sequence from clone CH211-117E20 in linkage group 6,
             complete sequence
          Length = 171645

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 577   aaatgaccacactcttaatactct 600
             ||||||| ||||||||||||||||
Sbjct: 51305 aaatgacaacactcttaatactct 51282



to top

>gb|AC116341.2| Homo sapiens chromosome 5 clone RP11-144A5, complete sequence
          Length = 31443

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    ggaaaaagacaaatacataa 95
             ||||||||||||||||||||
Sbjct: 11773 ggaaaaagacaaatacataa 11792



to top

>emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in linkage group 17,
             complete sequence
          Length = 120315

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   aacagactgaatgactgcac 228
             ||||||||||||||||||||
Sbjct: 61583 aacagactgaatgactgcac 61602



to top

>gb|AC112183.3| Homo sapiens chromosome 5 clone RP11-152F4, complete sequence
          Length = 163612

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     ggaaaaagacaaatacataa 95
              ||||||||||||||||||||
Sbjct: 160156 ggaaaaagacaaatacataa 160175



to top

>dbj|AK162928.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length
           enriched library, clone:A330052N16 product:hypothetical
           protein, full insert sequence
          Length = 5004

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   tatcctggatcttttatatt 27
           ||||||||||||||||||||
Sbjct: 641 tatcctggatcttttatatt 660



to top

>dbj|AK029720.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930505E07 product:solute carrier family 2
            (facilitated glucose transporter), member 5, full insert
            sequence
          Length = 3097

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 511  tggtcttgcagcaactcttt 530
            ||||||||||||||||||||
Sbjct: 2461 tggtcttgcagcaactcttt 2442



to top

>tpg|BK000650.1| TPA: TPA_exp: Mus musculus otopetrin 1 isoform a and isoform b (Otop1)
             gene, complete cds; alternatively spliced
          Length = 28272

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   ttgtccacgttgtcacagac 322
             ||||||||||||||||||||
Sbjct: 14605 ttgtccacgttgtcacagac 14624



to top

>emb|AL606971.22| Mouse DNA sequence from clone RP23-123I20 on chromosome 4, complete
             sequence
          Length = 91841

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 511   tggtcttgcagcaactcttt 530
             ||||||||||||||||||||
Sbjct: 55330 tggtcttgcagcaactcttt 55311



to top

>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds;
             glycyl-tRNA synthetase (Z195D10.2), ornithine
             carbamoyltransferase (Z195D10.3), putative gag protein
             (Z195D10.5), putative SET-domain transcriptional regulator
             (Z195D10.7), putative oxysterol-binding protein
             (Z195D10.8), putative polyprotein (Z195D10.9), putative
             oxysterol-binding protein (Z195D10.10), putative gag-pol
             polyprotein (Z195D10.11), putative
             phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12),
             hypothetical protein (Z195D10.15), putative gag-pol
             polyprotein (Z195D10.16), putative polyprotein
             (Z195D10.17), putative retrotransposon protein
             (Z195D10.18), and prpol (Z195D10.19) genes, complete cds;
             and putative teosinte branched2 (Z195D10.20) gene, partial
             cds
          Length = 141939

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 533   ctccacctggacctgctccagaac 556
             ||||||||| ||||||||||||||
Sbjct: 70388 ctccacctgaacctgctccagaac 70411



to top

>gb|AF161071.1|AF161071 Mus musculus fructose transporter GLUT5 mRNA, complete cds
          Length = 2069

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 511  tggtcttgcagcaactcttt 530
            ||||||||||||||||||||
Sbjct: 1825 tggtcttgcagcaactcttt 1806



to top

>gb|AC084071.20| Mus musculus strain C57BL/6J chromosome 5 clone rp23-426e16, complete
             sequence
          Length = 194175

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   ttgtccacgttgtcacagac 322
             ||||||||||||||||||||
Sbjct: 78067 ttgtccacgttgtcacagac 78086



to top

>gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, complete sequence
          Length = 192355

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     acaaatacataagtaagatg 103
              ||||||||||||||||||||
Sbjct: 111212 acaaatacataagtaagatg 111193



to top

>gb|L25932.1|HUMLBR01 Homo sapiens integral nuclear envelope inner membrane protein (LBR)
            gene, 5' UTR, exons 1 and 2
          Length = 5132

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   ggaaaaagacaaatacataa 95
            ||||||||||||||||||||
Sbjct: 4760 ggaaaaagacaaatacataa 4779



to top

>gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferase I (gtfJ) gene, complete
            cds, and gtfK gene, 5' end
          Length = 4941

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  tacagctgatggtatcaaga 138
            ||||||||||||||||||||
Sbjct: 2450 tacagctgatggtatcaaga 2469


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,057,387
Number of Sequences: 3902068
Number of extensions: 6057387
Number of successful extensions: 127050
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126951
Number of HSP's gapped (non-prelim): 76
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top