ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags14a11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009320.1| Triticum aestivum clone wlm24.pk0002.b11:fis, full insert mRNA sequence Length = 1331 Score = 983 bits (496), Expect = 0.0 Identities = 552/568 (97%), Gaps = 2/568 (0%) Strand = Plus / Minus Query: 119 acaaaattagctcacacgagttggaggatacaattatgcgattcggtacatcttttctgg 178 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1331 acaaaattagctcacacgagttgggggatacaattatgcgattcggtacatcttttctgg 1272 Query: 179 acaaggaacaaagaagaaggccgagaaacaaaacatgcatttgtgctt-aggcggttgcc 237 |||||||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||| Sbjct: 1271 acaaggaaggaagaagaaggccgagaaacaaaacttgcatttgtgctttaggcgtttgcc 1212 Query: 238 gccattgatgatgatctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctgg 297 ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1211 gccatggatgatgatctgtagcaagctcgctttgctgcacggacgatgtcctcaacctgt 1152 Query: 298 ggaactgccaatctttcaaggtttgccgcatagggcataggtacatcagctccggcaatc 357 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1151 ggaactgccaatctttcaaggtttgccgcatagggcatcggtacatcagctccggcaatc 1092 Query: 358 ctctcaactggtgcgtcaagatactcaaagctgtcctccacaacggacatgcatatttca 417 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1091 ctctcaactggtgcatcaagatactcaaagctgtcctccactacggacatgcatatttca 1032 Query: 418 gcaccaacaccatgttgtggaaagccttcttcaacggttaccaatctattggttttccta 477 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 1031 gcaccaacaccatgttgtggaaagccttcttcaacggtaaccaatctgttggttttccta 972 Query: 478 acggatgcattgatagcagctctatccaatggtctaattgaccgaaggttgatcacctca 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 971 acggatgcattgatagcagctctatccaatggtctaattgaccgaaggttgatcacctca 912 Query: 538 gcactgattccctccttggacagtatctctgcagcctgaagagcatacccaaccatctta 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 gcactgattccctccttggacagtatctctgcagcctgaagagcatacccaaccatctta 852 Query: 598 gagaatgcagtaattgtaacatcttttccttcccgttctatcttagctttgccaaattgg 657 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 851 gagaatgcagtaattgtaacatcttttccttcccgttctatcttagctttgcc-aattgg 793 Query: 658 gacactgaagctagaatcaagtacttca 685 |||||||||||||||||||||||||||| Sbjct: 792 gacactgaagctagaatcaagtacttca 765
>ref|XM_483531.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1587 Score = 500 bits (252), Expect = e-138 Identities = 409/460 (88%), Gaps = 1/460 (0%) Strand = Plus / Minus Query: 225 ttaggcggttgccgccattgatgatgatctgtagcaagctcgctttgctgcgcggacaat 284 |||||| ||||| ||||||| | || ||||||||| |||||||| ||||| || ||||| Sbjct: 1287 ttaggctgttgctgccattggtactgctctgtagcaggctcgcttcgctgcacgaacaat 1228 Query: 285 gtcctcaacctggggaactgccaatctttcaaggtttgccgcatagggcataggtacatc 344 |||||||||||| ||||| |||| || |||||||| || || |||||||| || ||||| Sbjct: 1227 gtcctcaacctgtggaacagccatcctctcaaggttggcagcgtagggcatgggcacatc 1168 Query: 345 agctccggcaatcctctcaactggtgcgtcaagatactcaaagctgtcctccacaacgga 404 |||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||| || Sbjct: 1167 agctccagcaatcctctcaactggcgcatcaagatattcaaagctgtcctctacaacaga 1108 Query: 405 catgcatatttcagcaccaacaccatgttgtggaaagccttcttcaacggttaccaatct 464 ||||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||| Sbjct: 1107 catgcatatttcagcgccaaccccatgttgtggaaatccttcttcaagggttaccaatct 1048 Query: 465 attggttttcctaacggatgcattgatagcagctctatccaatggtctaattgaccgaag 524 |||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 1047 gttggttttcctaactgatgcattgatagtagctctatccaatggcctaattgaccgaag 988 Query: 525 gttgatcacctcagcactgattccctccttggacagtatctctgcagcctgaagagcata 584 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 987 attgatcacctcagcactgattccctccttggaaagtatctctgcagcctgaagagcata 928 Query: 585 cccaaccatcttagagaatgcagtaattgtaacatcttttccttcccgttctatcttagc 644 || |||||||| |||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 927 tccgaccatcttggagaatgcggtaattgtaacatcttttccttcttgctctatcttagc 868 Query: 645 tttgccaaattgggacactgaagctagaatcaagtacttc 684 || || ||| || | || ||||||||||||||| ||||| Sbjct: 867 ctt-cccaatcggaagacagaagctagaatcaagaacttc 829 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggatgcagccatccgactgc 79 |||||||||||||||||||| Sbjct: 1457 ggatgcagccatccgactgc 1438
>ref|XM_507310.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0033D24.29 mRNA Length = 1658 Score = 500 bits (252), Expect = e-138 Identities = 409/460 (88%), Gaps = 1/460 (0%) Strand = Plus / Minus Query: 225 ttaggcggttgccgccattgatgatgatctgtagcaagctcgctttgctgcgcggacaat 284 |||||| ||||| ||||||| | || ||||||||| |||||||| ||||| || ||||| Sbjct: 1291 ttaggctgttgctgccattggtactgctctgtagcaggctcgcttcgctgcacgaacaat 1232 Query: 285 gtcctcaacctggggaactgccaatctttcaaggtttgccgcatagggcataggtacatc 344 |||||||||||| ||||| |||| || |||||||| || || |||||||| || ||||| Sbjct: 1231 gtcctcaacctgtggaacagccatcctctcaaggttggcagcgtagggcatgggcacatc 1172 Query: 345 agctccggcaatcctctcaactggtgcgtcaagatactcaaagctgtcctccacaacgga 404 |||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||| || Sbjct: 1171 agctccagcaatcctctcaactggcgcatcaagatattcaaagctgtcctctacaacaga 1112 Query: 405 catgcatatttcagcaccaacaccatgttgtggaaagccttcttcaacggttaccaatct 464 ||||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||| Sbjct: 1111 catgcatatttcagcgccaaccccatgttgtggaaatccttcttcaagggttaccaatct 1052 Query: 465 attggttttcctaacggatgcattgatagcagctctatccaatggtctaattgaccgaag 524 |||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 1051 gttggttttcctaactgatgcattgatagtagctctatccaatggcctaattgaccgaag 992 Query: 525 gttgatcacctcagcactgattccctccttggacagtatctctgcagcctgaagagcata 584 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 991 attgatcacctcagcactgattccctccttggaaagtatctctgcagcctgaagagcata 932 Query: 585 cccaaccatcttagagaatgcagtaattgtaacatcttttccttcccgttctatcttagc 644 || |||||||| |||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 931 tccgaccatcttggagaatgcggtaattgtaacatcttttccttcttgctctatcttagc 872 Query: 645 tttgccaaattgggacactgaagctagaatcaagtacttc 684 || || ||| || | || ||||||||||||||| ||||| Sbjct: 871 ctt-cccaatcggaagacagaagctagaatcaagaacttc 833 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggatgcagccatccgactgc 79 |||||||||||||||||||| Sbjct: 1461 ggatgcagccatccgactgc 1442
>dbj|AK104686.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C11, full insert sequence Length = 1587 Score = 500 bits (252), Expect = e-138 Identities = 409/460 (88%), Gaps = 1/460 (0%) Strand = Plus / Minus Query: 225 ttaggcggttgccgccattgatgatgatctgtagcaagctcgctttgctgcgcggacaat 284 |||||| ||||| ||||||| | || ||||||||| |||||||| ||||| || ||||| Sbjct: 1287 ttaggctgttgctgccattggtactgctctgtagcaggctcgcttcgctgcacgaacaat 1228 Query: 285 gtcctcaacctggggaactgccaatctttcaaggtttgccgcatagggcataggtacatc 344 |||||||||||| ||||| |||| || |||||||| || || |||||||| || ||||| Sbjct: 1227 gtcctcaacctgtggaacagccatcctctcaaggttggcagcgtagggcatgggcacatc 1168 Query: 345 agctccggcaatcctctcaactggtgcgtcaagatactcaaagctgtcctccacaacgga 404 |||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||| || Sbjct: 1167 agctccagcaatcctctcaactggcgcatcaagatattcaaagctgtcctctacaacaga 1108 Query: 405 catgcatatttcagcaccaacaccatgttgtggaaagccttcttcaacggttaccaatct 464 ||||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||| Sbjct: 1107 catgcatatttcagcgccaaccccatgttgtggaaatccttcttcaagggttaccaatct 1048 Query: 465 attggttttcctaacggatgcattgatagcagctctatccaatggtctaattgaccgaag 524 |||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 1047 gttggttttcctaactgatgcattgatagtagctctatccaatggcctaattgaccgaag 988 Query: 525 gttgatcacctcagcactgattccctccttggacagtatctctgcagcctgaagagcata 584 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 987 attgatcacctcagcactgattccctccttggaaagtatctctgcagcctgaagagcata 928 Query: 585 cccaaccatcttagagaatgcagtaattgtaacatcttttccttcccgttctatcttagc 644 || |||||||| |||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 927 tccgaccatcttggagaatgcggtaattgtaacatcttttccttcttgctctatcttagc 868 Query: 645 tttgccaaattgggacactgaagctagaatcaagtacttc 684 || || ||| || | || ||||||||||||||| ||||| Sbjct: 867 ctt-cccaatcggaagacagaagctagaatcaagaacttc 829 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggatgcagccatccgactgc 79 |||||||||||||||||||| Sbjct: 1457 ggatgcagccatccgactgc 1438
>dbj|AK071782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108B21, full insert sequence Length = 1658 Score = 500 bits (252), Expect = e-138 Identities = 409/460 (88%), Gaps = 1/460 (0%) Strand = Plus / Minus Query: 225 ttaggcggttgccgccattgatgatgatctgtagcaagctcgctttgctgcgcggacaat 284 |||||| ||||| ||||||| | || ||||||||| |||||||| ||||| || ||||| Sbjct: 1291 ttaggctgttgctgccattggtactgctctgtagcaggctcgcttcgctgcacgaacaat 1232 Query: 285 gtcctcaacctggggaactgccaatctttcaaggtttgccgcatagggcataggtacatc 344 |||||||||||| ||||| |||| || |||||||| || || |||||||| || ||||| Sbjct: 1231 gtcctcaacctgtggaacagccatcctctcaaggttggcagcgtagggcatgggcacatc 1172 Query: 345 agctccggcaatcctctcaactggtgcgtcaagatactcaaagctgtcctccacaacgga 404 |||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||| || Sbjct: 1171 agctccagcaatcctctcaactggcgcatcaagatattcaaagctgtcctctacaacaga 1112 Query: 405 catgcatatttcagcaccaacaccatgttgtggaaagccttcttcaacggttaccaatct 464 ||||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||| Sbjct: 1111 catgcatatttcagcgccaaccccatgttgtggaaatccttcttcaagggttaccaatct 1052 Query: 465 attggttttcctaacggatgcattgatagcagctctatccaatggtctaattgaccgaag 524 |||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 1051 gttggttttcctaactgatgcattgatagtagctctatccaatggcctaattgaccgaag 992 Query: 525 gttgatcacctcagcactgattccctccttggacagtatctctgcagcctgaagagcata 584 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 991 attgatcacctcagcactgattccctccttggaaagtatctctgcagcctgaagagcata 932 Query: 585 cccaaccatcttagagaatgcagtaattgtaacatcttttccttcccgttctatcttagc 644 || |||||||| |||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 931 tccgaccatcttggagaatgcggtaattgtaacatcttttccttcttgctctatcttagc 872 Query: 645 tttgccaaattgggacactgaagctagaatcaagtacttc 684 || || ||| || | || ||||||||||||||| ||||| Sbjct: 871 ctt-cccaatcggtagacagaagctagaatcaagaacttc 833 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggatgcagccatccgactgc 79 |||||||||||||||||||| Sbjct: 1461 ggatgcagccatccgactgc 1442
>gb|AY109884.1| Zea mays CL1583_1 mRNA sequence Length = 1735 Score = 412 bits (208), Expect = e-112 Identities = 352/400 (88%) Strand = Plus / Minus Query: 253 ctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaatctt 312 |||||||| || ||||||||||| || |||||||| || ||||| ||||| |||| ||| Sbjct: 1353 ctgtagcaggcccgctttgctgcccgcacaatgtcatcgacctgtggaacagccattctc 1294 Query: 313 tcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggtgcg 372 |||||||| || |||||||||||||||||||||||||| || |||||||||||||| || Sbjct: 1293 tcaaggttggcagcatagggcataggtacatcagctccagcgatcctctcaactggggca 1234 Query: 373 tcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacaccatgt 432 ||||| ||||||||||| || || ||||| ||||||||||| || ||||||| |||||| Sbjct: 1233 tcaaggtactcaaagctttcttctacaacagacatgcatatctcggcaccaatcccatgt 1174 Query: 433 tgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattgata 492 || || || ||||||||||| || ||||||| |||||||||||||| |||||||| ||| Sbjct: 1173 tgagggaacccttcttcaacagtcaccaatcggttggttttcctaacagatgcattaata 1114 Query: 493 gcagctctatccaatggtctaattgaccgaaggttgatcacctcagcactgattccctcc 552 ||||||||||| | |||||| || || ||||||||||||||||||||||||||||| ||| Sbjct: 1113 gcagctctatcaagtggtctgatcgatcgaaggttgatcacctcagcactgattccttcc 1054 Query: 553 ttggacagtatctctgcagcctgaagagcatacccaaccatcttagagaatgcagtaatt 612 ||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 1053 ttggacagtatctctgcagcctggagagcatagccaaccatcttggagaacgcagtaatg 994 Query: 613 gtaacatcttttccttcccgttctatcttagctttgccaa 652 ||||||||||| || || |||||||||||||||||||||| Sbjct: 993 gtaacatctttaccctcacgttctatcttagctttgccaa 954
>gb|AF069910.1|AF069910 Zea mays pyruvate dehydrogenase E1 beta subunit isoform 3 mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1655 Score = 404 bits (204), Expect = e-109 Identities = 351/400 (87%) Strand = Plus / Minus Query: 253 ctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaatctt 312 |||||||| || ||||||||||| || |||||||| || ||||| ||||| |||| ||| Sbjct: 1329 ctgtagcaggcccgctttgctgcccgcacaatgtcatcgacctgtggaacagccattctc 1270 Query: 313 tcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggtgcg 372 |||||||| || |||||||||||||||||||||||||| || |||||||||||||| || Sbjct: 1269 tcaaggttggcagcatagggcataggtacatcagctccagcgatcctctcaactggggca 1210 Query: 373 tcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacaccatgt 432 ||||| ||||||||||| || || ||||| ||||||||||| || ||||||| |||||| Sbjct: 1209 tcaaggtactcaaagctttcttctacaacagacatgcatatctcggcaccaatcccatgt 1150 Query: 433 tgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattgata 492 || || || ||||||||||| || ||||||| |||||||||||||| |||||||| ||| Sbjct: 1149 tgagggaacccttcttcaacagtcaccaatcggttggttttcctaacagatgcattaata 1090 Query: 493 gcagctctatccaatggtctaattgaccgaaggttgatcacctcagcactgattccctcc 552 ||||||||||| | |||||| || || ||||||||||||||||||||||||||||| ||| Sbjct: 1089 gcagctctatcaagtggtctgatcgatcgaaggttgatcacctcagcactgattccttcc 1030 Query: 553 ttggacagtatctctgcagcctgaagagcatacccaaccatcttagagaatgcagtaatt 612 ||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 1029 ttggacagtatctctgcagcctggagagcatagccaaccatcttggagaacgcagtaatg 970 Query: 613 gtaacatcttttccttcccgttctatcttagctttgccaa 652 ||||||||||| || | |||||||||||||||||||||| Sbjct: 969 gtaacatctttacccccacgttctatcttagctttgccaa 930
>gb|AF069909.1|AF069909 Zea mays pyruvate dehydrogenase E1 beta subunit isoform 2 mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1679 Score = 404 bits (204), Expect = e-109 Identities = 351/400 (87%) Strand = Plus / Minus Query: 253 ctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaatctt 312 |||||||| || |||||||| || || |||||||| || ||||| ||||| |||| ||| Sbjct: 1354 ctgtagcaggcccgctttgccgcccgcacaatgtcatcgacctgcggaacagccattctc 1295 Query: 313 tcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggtgcg 372 |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1294 tcaaggttggcagcatagggcataggtacatcagctccagcaatcctctcaactggtgca 1235 Query: 373 tcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacaccatgt 432 ||||| ||| | ||||| || || ||||| ||||||||||| || ||||||| |||||| Sbjct: 1234 tcaaggtacgcgaagctttcttctacaacagacatgcatatctcggcaccaatcccatgt 1175 Query: 433 tgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattgata 492 || || || ||||||||||| || ||||||| ||||||||||| || |||||||| ||| Sbjct: 1174 tgggggaacccttcttcaacagtcaccaatcggttggttttcctgacagatgcattaata 1115 Query: 493 gcagctctatccaatggtctaattgaccgaaggttgatcacctcagcactgattccctcc 552 ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 1114 gcagctctatcaagtggtctgattgatcgaaggttgatcacctcagcactgattccttcc 1055 Query: 553 ttggacagtatctctgcagcctgaagagcatacccaaccatcttagagaatgcagtaatt 612 ||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 1054 ttggacagtatctctgcagcctggagagcatagccaaccatcttggagaacgcagtaatg 995 Query: 613 gtaacatcttttccttcccgttctatcttagctttgccaa 652 ||||||||||| || || |||||||||||||||||||||| Sbjct: 994 gtaacatctttaccctcacgttctatcttagctttgccaa 955 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 gcagatctacaaaattagctc 131 ||||||||||||||||||||| Sbjct: 1511 gcagatctacaaaattagctc 1491
>dbj|AK061863.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H03, full insert sequence Length = 1598 Score = 377 bits (190), Expect = e-101 Identities = 374/434 (86%), Gaps = 1/434 (0%) Strand = Plus / Minus Query: 252 tctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaatct 311 ||||||||| || ||||| ||||| |||||||| || |||||||| || || |||| || Sbjct: 1279 tctgtagcacgcacgcttcgctgcacggacaatatcgtcaacctgtgggacagccatcct 1220 Query: 312 ttcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggtgc 371 ||||| || || ||||||||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 1219 ctcaagattggcagcatagggcatgggtacatcagctccagcaattctctcaactggtgc 1160 Query: 372 gtcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacaccatg 431 |||||||| |||||||| ||||| ||||| ||||||||||| |||||||||| ||||| Sbjct: 1159 atcaagatattcaaagctttcctcaacaacagacatgcatatctcagcaccaatcccatg 1100 Query: 432 ttgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattgat 491 ||||| |||| ||| |||| ||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 1099 ctgtgggaagctttcctcaatggtcaccaatctatttgtttttctaacagatgcattgat 1040 Query: 492 agcagctctatccaatggtctaattgaccgaaggttgatcacctcagcactgattccctc 551 || ||||||||| | |||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 1039 agtagctctatcaagtggtctaattgaacgaaggtttatcacctcagcactgattccttc 980 Query: 552 cttggacagtatctctgcagcctgaagagcatacccaaccatcttagagaatgcagtaat 611 ||||||| ||| ||||| |||||||||||||| ||||||||||| ||| |||||||||| Sbjct: 979 tttggacaatatatctgcggcctgaagagcatatccaaccatcttggagtatgcagtaat 920 Query: 612 tgtaacatcttttccttcccgttctatcttagctttgccaaattgggacactgaagctag 671 |||||||||||| || || || |||||||| |||||||| |||||| | | ||| |||| Sbjct: 919 tgtaacatctttaccctcacgctctatctttgctttgcc-aattggcagagcgaaactag 861 Query: 672 aatcaagtacttca 685 ||||||| |||||| Sbjct: 860 aatcaagcacttca 847
>dbj|AK069525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022P15, full insert sequence Length = 1608 Score = 377 bits (190), Expect = e-101 Identities = 374/434 (86%), Gaps = 1/434 (0%) Strand = Plus / Minus Query: 252 tctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaatct 311 ||||||||| || ||||| ||||| |||||||| || |||||||| || || |||| || Sbjct: 1291 tctgtagcacgcacgcttcgctgcacggacaatatcgtcaacctgtgggacagccatcct 1232 Query: 312 ttcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggtgc 371 ||||| || || ||||||||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 1231 ctcaagattggcagcatagggcatgggtacatcagctccagcaattctctcaactggtgc 1172 Query: 372 gtcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacaccatg 431 |||||||| |||||||| ||||| ||||| ||||||||||| |||||||||| ||||| Sbjct: 1171 atcaagatattcaaagctttcctcaacaacagacatgcatatctcagcaccaatcccatg 1112 Query: 432 ttgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattgat 491 ||||| |||| ||| |||| ||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 1111 ctgtgggaagctttcctcaatggtcaccaatctatttgtttttctaacagatgcattgat 1052 Query: 492 agcagctctatccaatggtctaattgaccgaaggttgatcacctcagcactgattccctc 551 || ||||||||| | |||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 1051 agtagctctatcaagtggtctaattgaacgaaggtttatcacctcagcactgattccttc 992 Query: 552 cttggacagtatctctgcagcctgaagagcatacccaaccatcttagagaatgcagtaat 611 ||||||| ||| ||||| |||||||||||||| ||||||||||| ||| |||||||||| Sbjct: 991 tttggacaatatatctgcggcctgaagagcatatccaaccatcttggagtatgcagtaat 932 Query: 612 tgtaacatcttttccttcccgttctatcttagctttgccaaattgggacactgaagctag 671 |||||||||||| || || || |||||||| |||||||| |||||| | | ||| |||| Sbjct: 931 tgtaacatctttaccctcacgctctatctttgctttgcc-aattggcagagcgaaactag 873 Query: 672 aatcaagtacttca 685 ||||||| |||||| Sbjct: 872 aatcaagcacttca 859
>gb|BT016454.1| Zea mays clone Contig287 mRNA sequence Length = 1335 Score = 373 bits (188), Expect = e-100 Identities = 347/400 (86%) Strand = Plus / Minus Query: 253 ctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaatctt 312 |||||||| || ||||||||||| || |||||||| || ||||| ||||| || | ||| Sbjct: 1091 ctgtagcaggcccgctttgctgcccgcacaatgtcatcgacctgtggaacagctattctc 1032 Query: 313 tcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggtgcg 372 |||||||| || |||||||||||||||||||||||||| || |||||||||||||| || Sbjct: 1031 tcaaggttggcagcatagggcataggtacatcagctccagcgatcctctcaactggggca 972 Query: 373 tcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacaccatgt 432 ||||| ||||||||||| || || ||||| ||||||||||| || ||||||| |||||| Sbjct: 971 tcaaggtactcaaagctttcttctacaacagacatgcatatctcggcaccaatcccatgt 912 Query: 433 tgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattgata 492 || || || ||||||||||| || ||||||| ||||||||||| || |||||||| ||| Sbjct: 911 tgagggaacccttcttcaacagtcaccaatcggttggttttcctgacagatgcattaata 852 Query: 493 gcagctctatccaatggtctaattgaccgaaggttgatcacctcagcactgattccctcc 552 ||||||||||| | |||||| || || ||||||||||||| ||||||||||||||| ||| Sbjct: 851 gcagctctatcaagtggtctgatcgatcgaaggttgatcatctcagcactgattccttcc 792 Query: 553 ttggacagtatctctgcagcctgaagagcatacccaaccatcttagagaatgcagtaatt 612 |||| |||||||||||||||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 791 ttggccagtatctctgcagcctggagagcatagccaaccatcttggagaacgcagtaatg 732 Query: 613 gtaacatcttttccttcccgttctatcttagctttgccaa 652 ||||||||||| || | |||||||||||||||||||||| Sbjct: 731 gtaacatctttacccccacgttctatcttagctttgccaa 692
>gb|BT016804.1| Zea mays clone Contig637 mRNA sequence Length = 1826 Score = 335 bits (169), Expect = 1e-88 Identities = 365/429 (85%), Gaps = 1/429 (0%) Strand = Plus / Minus Query: 253 ctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaatctt 312 ||||||||||| ||||| ||||| ||||| ||||| || ||||| ||||| |||| || Sbjct: 1425 ctgtagcaagcacgcttggctgcccggacgatgtcatcgacctgtggaacagccatcctc 1366 Query: 313 tcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggtgcg 372 |||||||| || || || ||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 1365 tcaaggttggcagcgtacggcatgggcacatcagctccagcaatcctctcgactggtgca 1306 Query: 373 tcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacaccatgt 432 ||||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||| Sbjct: 1305 tcaagatactcaaagctgtcctctacaacagacatgcatatttccgcaccaatcccatgt 1246 Query: 433 tgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattgata 492 || || ||||||||||| |||||||||||||||||||||||||| || |||||||| ||| Sbjct: 1245 tgagggaagccttcttctacggttaccaatctattggttttcctcacagatgcattaata 1186 Query: 493 gcagctctatccaatggtctaattgaccgaaggttgatcacctcagcactgattccctcc 552 | ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| || ||| Sbjct: 1185 gtagctctatccagcggtctaattgagcgaagattgattacctcggcactgataccttcc 1126 Query: 553 ttggacagtatctctgcagcctgaagagcatacccaaccatcttagagaatgcagtaatt 612 |||| |||||| || || |||||||| ||||| || ||||| || ||||||||||| || Sbjct: 1125 ttggccagtatatcagcggcctgaagggcatatcccaccattttggagaatgcagtgata 1066 Query: 613 gtaacatcttttccttcccgttctatcttagctttgccaaattgggacactgaagctaga 672 || |||||||| |||| || ||||||||||| || || ||| || | | ||||||||| Sbjct: 1065 gtgacatctttcccttgtcgctctatcttagcctttcc-aatcggaaggcagaagctaga 1007 Query: 673 atcaagtac 681 ||||||||| Sbjct: 1006 atcaagtac 998
>gb|AY107032.1| Zea mays PCO074087 mRNA sequence Length = 1752 Score = 335 bits (169), Expect = 1e-88 Identities = 365/429 (85%), Gaps = 1/429 (0%) Strand = Plus / Minus Query: 253 ctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaatctt 312 ||||||||||| ||||| ||||| ||||| ||||| || ||||| ||||| |||| || Sbjct: 1402 ctgtagcaagcacgcttggctgcccggacgatgtcatcgacctgtggaacagccatcctc 1343 Query: 313 tcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggtgcg 372 |||||||| || || || ||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 1342 tcaaggttggcagcgtacggcatgggcacatcagctccagcaatcctctcgactggtgca 1283 Query: 373 tcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacaccatgt 432 ||||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||| Sbjct: 1282 tcaagatactcaaagctgtcctctacaacagacatgcatatttccgcaccaatcccatgt 1223 Query: 433 tgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattgata 492 || || ||||||||||| |||||||||||||||||||||||||| || |||||||| ||| Sbjct: 1222 tgagggaagccttcttctacggttaccaatctattggttttcctcacagatgcattaata 1163 Query: 493 gcagctctatccaatggtctaattgaccgaaggttgatcacctcagcactgattccctcc 552 | ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| || ||| Sbjct: 1162 gtagctctatccagcggtctaattgagcgaagattgattacctcggcactgataccttcc 1103 Query: 553 ttggacagtatctctgcagcctgaagagcatacccaaccatcttagagaatgcagtaatt 612 |||| |||||| || || |||||||| ||||| || ||||| || ||||||||||| || Sbjct: 1102 ttggccagtatatcagcggcctgaagggcatatcccaccattttggagaatgcagtgata 1043 Query: 613 gtaacatcttttccttcccgttctatcttagctttgccaaattgggacactgaagctaga 672 || |||||||| |||| || ||||||||||| || || ||| || | | ||||||||| Sbjct: 1042 gtgacatctttcccttgtcgctctatcttagcctttcc-aatcggaaggcagaagctaga 984 Query: 673 atcaagtac 681 ||||||||| Sbjct: 983 atcaagtac 975
>gb|AF069908.1|AF069908 Zea mays pyruvate dehydrogenase E1 beta subunit isoform 1 mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1511 Score = 335 bits (169), Expect = 1e-88 Identities = 365/429 (85%), Gaps = 1/429 (0%) Strand = Plus / Minus Query: 253 ctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaatctt 312 ||||||||||| ||||| ||||| ||||| ||||| || ||||| ||||| |||| || Sbjct: 1172 ctgtagcaagcacgcttggctgcccggacgatgtcatcgacctgtggaacagccatcctc 1113 Query: 313 tcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggtgcg 372 |||||||| || || || ||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 1112 tcaaggttggcagcgtacggcatgggcacatcagctccagcaatcctctcgactggtgca 1053 Query: 373 tcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacaccatgt 432 ||||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||| Sbjct: 1052 tcaagatactcaaagctgtcctctacaacagacatgcatatttccgcaccaatcccatgt 993 Query: 433 tgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattgata 492 || || ||||||||||| |||||||||||||||||||||||||| || |||||||| ||| Sbjct: 992 tgagggaagccttcttctacggttaccaatctattggttttcctcacagatgcattaata 933 Query: 493 gcagctctatccaatggtctaattgaccgaaggttgatcacctcagcactgattccctcc 552 | ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| || ||| Sbjct: 932 gtagctctatccagcggtctaattgagcgaagattgattacctcggcactgataccttcc 873 Query: 553 ttggacagtatctctgcagcctgaagagcatacccaaccatcttagagaatgcagtaatt 612 |||| |||||| || || |||||||| ||||| || ||||| || ||||||||||| || Sbjct: 872 ttggccagtatatcagcggcctgaagggcatatcccaccattttggagaatgcagtgata 813 Query: 613 gtaacatcttttccttcccgttctatcttagctttgccaaattgggacactgaagctaga 672 || |||||||| |||| || ||||||||||| || || ||| || | | ||||||||| Sbjct: 812 gtgacatctttcccttgtcgctctatcttagcctttcc-aatcggaaggcagaagctaga 754 Query: 673 atcaagtac 681 ||||||||| Sbjct: 753 atcaagtac 745
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 180 bits (91), Expect = 4e-42 Identities = 118/127 (92%) Strand = Plus / Minus Query: 409 catatttcagcaccaacaccatgttgtggaaagccttcttcaacggttaccaatctattg 468 ||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||| ||| Sbjct: 26775191 catatttcagcgccaaccccatgttgtggaaatccttcttcaagggttaccaatctgttg 26775132 Query: 469 gttttcctaacggatgcattgatagcagctctatccaatggtctaattgaccgaaggttg 528 ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||| Sbjct: 26775131 gttttcctaactgatgcattgatagtagctctatccaatggcctaattgaccgaagattg 26775072 Query: 529 atcacct 535 ||||||| Sbjct: 26775071 atcacct 26775065 Score = 107 bits (54), Expect = 5e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 292 acctggggaactgccaatctttcaaggtttgccgcatagggcataggtacatcagctccg 351 ||||| ||||| |||| || |||||||| || || |||||||| || ||||||||||| Sbjct: 26775394 acctgtggaacagccatcctctcaaggttggcagcgtagggcatgggcacatcagctcca 26775335 Query: 352 gcaatcctctcaactggtgcgtcaagatactcaaagctgtcctccacaacggacatgc 409 ||||||||||||||||| || |||||||| |||||||||||||| ||||| ||||||| Sbjct: 26775334 gcaatcctctcaactggcgcatcaagatattcaaagctgtcctctacaacagacatgc 26775277 Score = 83.8 bits (42), Expect = 7e-13 Identities = 45/46 (97%) Strand = Plus / Minus Query: 532 acctcagcactgattccctccttggacagtatctctgcagcctgaa 577 |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 26774955 acctcagcactgattccctccttggaaagtatctctgcagcctgaa 26774910 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 572 cctgaagagcatacccaaccatcttagagaatgcagtaattgtaacatcttttccttc 629 ||||||||||||| || |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 26773885 cctgaagagcatatccgaccatcttggagaatgcggtaattgtaacatcttttccttc 26773828 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 225 ttaggcggttgccgccattgatgatgatctgtagcaagctcgctttgctgcgcggacaat 284 |||||| ||||| ||||||| | || ||||||||| |||||||| ||||| || ||||| Sbjct: 26775685 ttaggctgttgctgccattggtactgctctgtagcaggctcgcttcgctgcacgaacaat 26775626 Query: 285 gtcctcaacctg 296 |||||||||||| Sbjct: 26775625 gtcctcaacctg 26775614 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggatgcagccatccgactgc 79 |||||||||||||||||||| Sbjct: 26775855 ggatgcagccatccgactgc 26775836
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 180 bits (91), Expect = 4e-42 Identities = 118/127 (92%) Strand = Plus / Minus Query: 409 catatttcagcaccaacaccatgttgtggaaagccttcttcaacggttaccaatctattg 468 ||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||| ||| Sbjct: 118533 catatttcagcgccaaccccatgttgtggaaatccttcttcaagggttaccaatctgttg 118474 Query: 469 gttttcctaacggatgcattgatagcagctctatccaatggtctaattgaccgaaggttg 528 ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||| Sbjct: 118473 gttttcctaactgatgcattgatagtagctctatccaatggcctaattgaccgaagattg 118414 Query: 529 atcacct 535 ||||||| Sbjct: 118413 atcacct 118407 Score = 107 bits (54), Expect = 5e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 292 acctggggaactgccaatctttcaaggtttgccgcatagggcataggtacatcagctccg 351 ||||| ||||| |||| || |||||||| || || |||||||| || ||||||||||| Sbjct: 118736 acctgtggaacagccatcctctcaaggttggcagcgtagggcatgggcacatcagctcca 118677 Query: 352 gcaatcctctcaactggtgcgtcaagatactcaaagctgtcctccacaacggacatgc 409 ||||||||||||||||| || |||||||| |||||||||||||| ||||| ||||||| Sbjct: 118676 gcaatcctctcaactggcgcatcaagatattcaaagctgtcctctacaacagacatgc 118619 Score = 83.8 bits (42), Expect = 7e-13 Identities = 45/46 (97%) Strand = Plus / Minus Query: 532 acctcagcactgattccctccttggacagtatctctgcagcctgaa 577 |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 118297 acctcagcactgattccctccttggaaagtatctctgcagcctgaa 118252 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 572 cctgaagagcatacccaaccatcttagagaatgcagtaattgtaacatcttttccttc 629 ||||||||||||| || |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 117227 cctgaagagcatatccgaccatcttggagaatgcggtaattgtaacatcttttccttc 117170 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 225 ttaggcggttgccgccattgatgatgatctgtagcaagctcgctttgctgcgcggacaat 284 |||||| ||||| ||||||| | || ||||||||| |||||||| ||||| || ||||| Sbjct: 119027 ttaggctgttgctgccattggtactgctctgtagcaggctcgcttcgctgcacgaacaat 118968 Query: 285 gtcctcaacctg 296 |||||||||||| Sbjct: 118967 gtcctcaacctg 118956 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggatgcagccatccgactgc 79 |||||||||||||||||||| Sbjct: 119197 ggatgcagccatccgactgc 119178
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 180 bits (91), Expect = 4e-42 Identities = 118/127 (92%) Strand = Plus / Minus Query: 409 catatttcagcaccaacaccatgttgtggaaagccttcttcaacggttaccaatctattg 468 ||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||| ||| Sbjct: 37981 catatttcagcgccaaccccatgttgtggaaatccttcttcaagggttaccaatctgttg 37922 Query: 469 gttttcctaacggatgcattgatagcagctctatccaatggtctaattgaccgaaggttg 528 ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||| Sbjct: 37921 gttttcctaactgatgcattgatagtagctctatccaatggcctaattgaccgaagattg 37862 Query: 529 atcacct 535 ||||||| Sbjct: 37861 atcacct 37855 Score = 107 bits (54), Expect = 5e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 292 acctggggaactgccaatctttcaaggtttgccgcatagggcataggtacatcagctccg 351 ||||| ||||| |||| || |||||||| || || |||||||| || ||||||||||| Sbjct: 38184 acctgtggaacagccatcctctcaaggttggcagcgtagggcatgggcacatcagctcca 38125 Query: 352 gcaatcctctcaactggtgcgtcaagatactcaaagctgtcctccacaacggacatgc 409 ||||||||||||||||| || |||||||| |||||||||||||| ||||| ||||||| Sbjct: 38124 gcaatcctctcaactggcgcatcaagatattcaaagctgtcctctacaacagacatgc 38067 Score = 83.8 bits (42), Expect = 7e-13 Identities = 45/46 (97%) Strand = Plus / Minus Query: 532 acctcagcactgattccctccttggacagtatctctgcagcctgaa 577 |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 37745 acctcagcactgattccctccttggaaagtatctctgcagcctgaa 37700 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 572 cctgaagagcatacccaaccatcttagagaatgcagtaattgtaacatcttttccttc 629 ||||||||||||| || |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 36675 cctgaagagcatatccgaccatcttggagaatgcggtaattgtaacatcttttccttc 36618 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 225 ttaggcggttgccgccattgatgatgatctgtagcaagctcgctttgctgcgcggacaat 284 |||||| ||||| ||||||| | || ||||||||| |||||||| ||||| || ||||| Sbjct: 38475 ttaggctgttgctgccattggtactgctctgtagcaggctcgcttcgctgcacgaacaat 38416 Query: 285 gtcctcaacctg 296 |||||||||||| Sbjct: 38415 gtcctcaacctg 38404 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggatgcagccatccgactgc 79 |||||||||||||||||||| Sbjct: 38645 ggatgcagccatccgactgc 38626
>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0094K23, complete sequence Length = 167482 Score = 117 bits (59), Expect = 5e-23 Identities = 110/127 (86%) Strand = Plus / Minus Query: 409 catatttcagcaccaacaccatgttgtggaaagccttcttcaacggttaccaatctattg 468 ||||| |||||||||| ||||| ||||| |||| ||| |||| ||| ||||||||||| Sbjct: 57458 catatctcagcaccaatcccatgctgtgggaagctttcctcaatggtcaccaatctattt 57399 Query: 469 gttttcctaacggatgcattgatagcagctctatccaatggtctaattgaccgaaggttg 528 ||||| ||||| ||||||||||||| ||||||||| | |||||||||||| |||||||| Sbjct: 57398 gtttttctaacagatgcattgatagtagctctatcaagtggtctaattgaacgaaggttt 57339 Query: 529 atcacct 535 ||||||| Sbjct: 57338 atcacct 57332 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 325 gcatagggcataggtacatcagctccggcaatcctctcaactggtgcgtcaagatactca 384 ||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| ||| Sbjct: 57621 gcatagggcatgggtacatcagctccagcaattctctcaactggtgcatcaagatattca 57562 Query: 385 aagctgtcctccacaacggacatgc 409 ||||| ||||| ||||| ||||||| Sbjct: 57561 aagctttcctcaacaacagacatgc 57537 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 572 cctgaagagcatacccaaccatcttagagaatgcagtaattgtaacatcttttccttccc 631 ||||||||||||| ||||||||||| ||| |||||||||||||||||||||| || || | Sbjct: 56780 cctgaagagcatatccaaccatcttggagtatgcagtaattgtaacatctttaccctcac 56721 Query: 632 gttctatct 640 | ||||||| Sbjct: 56720 gctctatct 56712 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 527 tgatcacctcagcactgattccctccttggacagtatctctgcagcctgaa 577 |||||||||||||||||||||| || ||||||| ||| ||||| ||||||| Sbjct: 57230 tgatcacctcagcactgattccttctttggacaatatatctgcggcctgaa 57180
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 117 bits (59), Expect = 5e-23 Identities = 110/127 (86%) Strand = Plus / Minus Query: 409 catatttcagcaccaacaccatgttgtggaaagccttcttcaacggttaccaatctattg 468 ||||| |||||||||| ||||| ||||| |||| ||| |||| ||| ||||||||||| Sbjct: 19462051 catatctcagcaccaatcccatgctgtgggaagctttcctcaatggtcaccaatctattt 19461992 Query: 469 gttttcctaacggatgcattgatagcagctctatccaatggtctaattgaccgaaggttg 528 ||||| ||||| ||||||||||||| ||||||||| | |||||||||||| |||||||| Sbjct: 19461991 gtttttctaacagatgcattgatagtagctctatcaagtggtctaattgaacgaaggttt 19461932 Query: 529 atcacct 535 ||||||| Sbjct: 19461931 atcacct 19461925 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 325 gcatagggcataggtacatcagctccggcaatcctctcaactggtgcgtcaagatactca 384 ||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| ||| Sbjct: 19462214 gcatagggcatgggtacatcagctccagcaattctctcaactggtgcatcaagatattca 19462155 Query: 385 aagctgtcctccacaacggacatgc 409 ||||| ||||| ||||| ||||||| Sbjct: 19462154 aagctttcctcaacaacagacatgc 19462130 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 572 cctgaagagcatacccaaccatcttagagaatgcagtaattgtaacatcttttccttccc 631 ||||||||||||| ||||||||||| ||| |||||||||||||||||||||| || || | Sbjct: 19461373 cctgaagagcatatccaaccatcttggagtatgcagtaattgtaacatctttaccctcac 19461314 Query: 632 gttctatct 640 | ||||||| Sbjct: 19461313 gctctatct 19461305 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 527 tgatcacctcagcactgattccctccttggacagtatctctgcagcctgaa 577 |||||||||||||||||||||| || ||||||| ||| ||||| ||||||| Sbjct: 19461823 tgatcacctcagcactgattccttctttggacaatatatctgcggcctgaa 19461773
>ref|NM_124463.2| Arabidopsis thaliana pyruvate dehydrogenase (acetyl-transferring) AT5G50850 mRNA, complete cds Length = 1543 Score = 107 bits (54), Expect = 5e-20 Identities = 195/242 (80%) Strand = Plus / Minus Query: 250 gatctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaat 309 |||||||| ||||||| ||||| ||| || || |||||||| | ||| |||| |||||| Sbjct: 1231 gatctgtaacaagctctctttgatgcacgaacgatgtcctctatctgaggaagagccaat 1172 Query: 310 ctttcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggt 369 || || ||||| || ||||| ||||| || ||||||||||| ||||||||||| || ||| Sbjct: 1171 ctctctaggttagctgcatacggcattggaacatcagctcctgcaatcctctcgaccggt 1112 Query: 370 gcgtcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacacca 429 || || | ||| |||||| || || ||||| ||| || ||||| |||| || ||| Sbjct: 1111 gcatccaagtacgaaaagctctcttctacaaccgacgcacaaatttctgcacagactcca 1052 Query: 430 tgttgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattg 489 |||||||| || ||||||||||| |||||||||||| | |||||||| || || |||||| Sbjct: 1051 tgttgtgggaaaccttcttcaactgttaccaatctactcgttttcctcactgaagcattg 992 Query: 490 at 491 || Sbjct: 991 at 990
>gb|BT000839.1| Arabidopsis thaliana At5g50850/K16E14_1 mRNA, complete cds Length = 1092 Score = 107 bits (54), Expect = 5e-20 Identities = 195/242 (80%) Strand = Plus / Minus Query: 250 gatctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaat 309 |||||||| ||||||| ||||| ||| || || |||||||| | ||| |||| |||||| Sbjct: 1085 gatctgtaacaagctctctttgatgcacgaacgatgtcctctatctgaggaagagccaat 1026 Query: 310 ctttcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggt 369 || || ||||| || ||||| ||||| || ||||||||||| ||||||||||| || ||| Sbjct: 1025 ctctctaggttagctgcatacggcattggaacatcagctcctgcaatcctctcgaccggt 966 Query: 370 gcgtcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacacca 429 || || | ||| |||||| || || ||||| ||| || ||||| |||| || ||| Sbjct: 965 gcatccaagtacgaaaagctctcttctacaaccgacgcacaaatttctgcacagactcca 906 Query: 430 tgttgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattg 489 |||||||| || ||||||||||| |||||||||||| | |||||||| || || |||||| Sbjct: 905 tgttgtgggaaaccttcttcaactgttaccaatctactcgttttcctcactgaagcattg 846 Query: 490 at 491 || Sbjct: 845 at 844
>gb|AY070728.1| Arabidopsis thaliana AT5g50850/K16E14_1 mRNA, complete cds Length = 1401 Score = 107 bits (54), Expect = 5e-20 Identities = 195/242 (80%) Strand = Plus / Minus Query: 250 gatctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaat 309 |||||||| ||||||| ||||| ||| || || |||||||| | ||| |||| |||||| Sbjct: 1213 gatctgtaacaagctctctttgatgcacgaacgatgtcctctatctgaggaagagccaat 1154 Query: 310 ctttcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggt 369 || || ||||| || ||||| ||||| || ||||||||||| ||||||||||| || ||| Sbjct: 1153 ctctctaggttagctgcatacggcattggaacatcagctcctgcaatcctctcgaccggt 1094 Query: 370 gcgtcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacacca 429 || || | ||| |||||| || || ||||| ||| || ||||| |||| || ||| Sbjct: 1093 gcatccaagtacgaaaagctctcttctacaaccgacgcacaaatttctgcacagactcca 1034 Query: 430 tgttgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattg 489 |||||||| || ||||||||||| |||||||||||| | |||||||| || || |||||| Sbjct: 1033 tgttgtgggaaaccttcttcaactgttaccaatctactcgttttcctcactgaagcattg 974 Query: 490 at 491 || Sbjct: 973 at 972
>emb|BX830767.1|CNS0A1QX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1317 Score = 107 bits (54), Expect = 5e-20 Identities = 195/242 (80%) Strand = Plus / Minus Query: 250 gatctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaat 309 |||||||| ||||||| ||||| ||| || || |||||||| | ||| |||| |||||| Sbjct: 1196 gatctgtaacaagctctctttgatgcacgaacgatgtcctctatctgaggaagagccaat 1137 Query: 310 ctttcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggt 369 || || ||||| || ||||| ||||| || ||||||||||| ||||||||||| || ||| Sbjct: 1136 ctctctaggttagctgcatacggcattggaacatcagctcctgcaatcctctcgaccggt 1077 Query: 370 gcgtcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacacca 429 || || | ||| |||||| || || ||||| ||| || ||||| |||| || ||| Sbjct: 1076 gcatccaagtacgaaaagctctcttctacaaccgacgcacaaatttctgcacagactcca 1017 Query: 430 tgttgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattg 489 |||||||| || ||||||||||| |||||||||||| | |||||||| || || |||||| Sbjct: 1016 tgttgtgggaaaccttcttcaactgttaccaatctactcgttttcctcactgaagcattg 957 Query: 490 at 491 || Sbjct: 956 at 955
>gb|U56697.1|PSU56697 Pisum sativum pyruvate dehydrogenase E1beta mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1522 Score = 107 bits (54), Expect = 5e-20 Identities = 177/218 (81%) Strand = Plus / Minus Query: 412 atttcagcaccaacaccatgttgtggaaagccttcttcaacggttaccaatctattggtt 471 |||||||| |||||||| || || ||||| ||||||||||| || |||||||| |||||| Sbjct: 998 atttcagcgccaacaccgtgctgaggaaatccttcttcaactgtcaccaatctgttggtt 939 Query: 472 ttcctaacggatgcattgatagcagctctatccaatggtctaattgaccgaaggttgatc 531 ||||| ||||| |||||||| | | || ||| | ||| || |||||||| | || || Sbjct: 938 ttccttacggaagcattgatggtgggtcgatcaagtggcctgattgaccgtaaattaata 879 Query: 532 acctcagcactgattccctccttggacagtatctctgcagcctgaagagcatacccaacc 591 ||||| ||||||||||| ||||| |||||||| ||||||| |||||| | |||||| Sbjct: 878 acctcggcactgattccttccttttcaagtatctcagcagcctttagagcaaagccaacc 819 Query: 592 atcttagagaatgcagtaattgtaacatcttttccttc 629 || || ||||| || ||||| || |||||||||||||| Sbjct: 818 atttttgagaaggctgtaatagtcacatcttttccttc 781
>emb|AJ718902.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC23-4-295, cultivar Bright Yellow 2 Length = 226 Score = 105 bits (53), Expect = 2e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 532 acctcagcactgattccctccttggacagtatctctgcagcctgaagagcatacccaacc 591 ||||||||||| ||||| ||||| | || || || ||||||||||||||||| |||||| Sbjct: 185 acctcagcactaattccttccttagcaagaatttcagcagcctgaagagcatagccaacc 126 Query: 592 atcttagagaatgcagtaattgtaacatcttttccttcccgttctatcttagcttt 647 ||||| ||||| ||||| ||||| ||||| ||||||| ||||||||||||||||| Sbjct: 125 atctttgagaaggcagtgattgtcacatcctttccttngcgttctatcttagcttt 70
>gb|U09137.1|ATU09137 Arabidopsis thaliana pyruvate dehydrogenase E1 beta subunit mRNA, complete cds Length = 1214 Score = 91.7 bits (46), Expect = 3e-15 Identities = 193/242 (79%) Strand = Plus / Minus Query: 250 gatctgtagcaagctcgctttgctgcgcggacaatgtcctcaacctggggaactgccaat 309 |||||||| ||||||| ||||| ||| || || |||||||| | ||| |||| |||||| Sbjct: 1154 gatctgtaacaagctctctttgatgcacgaacgatgtcctctatctgaggaagagccaat 1095 Query: 310 ctttcaaggtttgccgcatagggcataggtacatcagctccggcaatcctctcaactggt 369 || || ||||| || | ||| || || || ||||||||||| ||||||||||| || ||| Sbjct: 1094 ctctctaggttagctgtatacgggattggaacatcagctcctgcaatcctctcgaccggt 1035 Query: 370 gcgtcaagatactcaaagctgtcctccacaacggacatgcatatttcagcaccaacacca 429 || || | ||| |||||| || || ||||| ||| || ||||| |||| || ||| Sbjct: 1034 gcatccaagtacgaaaagctctcttctacaaccgacgcacaaatttctgcacagactcca 975 Query: 430 tgttgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgcattg 489 |||||||| || ||||||||||| |||||||||||| | |||||||| || || |||||| Sbjct: 974 tgttgtgggaaaccttcttcaactgttaccaatctactcgttttcctcactgaagcattg 915 Query: 490 at 491 || Sbjct: 914 at 913
>gb|BT013848.1| Lycopersicon esculentum clone 132808R, mRNA sequence Length = 1659 Score = 89.7 bits (45), Expect = 1e-14 Identities = 102/121 (84%) Strand = Plus / Minus Query: 532 acctcagcactgattccctccttggacagtatctctgcagcctgaagagcatacccaacc 591 ||||||||||| |||||||| || | || || || ||||||| ||||||| | |||||| Sbjct: 947 acctcagcactaattccctcttttgcaagaatttcagcagccttaagagcagaaccaacc 888 Query: 592 atcttagagaatgcagtaattgtaacatcttttccttcccgttctatcttagctttgcca 651 ||||| ||||| ||||||||||| | ||| |||||||| ||||| ||||||||||| ||| Sbjct: 887 atctttgagaaagcagtaattgtgatatcctttccttcacgttcaatcttagcttttcca 828 Query: 652 a 652 | Sbjct: 827 a 827 Score = 69.9 bits (35), Expect = 1e-08 Identities = 152/191 (79%) Strand = Plus / Minus Query: 267 ctttgctgcgcggacaatgtcctcaacctggggaactgccaatctttcaaggtttgccgc 326 ||||||| | || ||||| || |||| ||| ||||| |||| |||||| || ||||| || Sbjct: 1212 ctttgctccacgaacaatatcttcaatctgtggaacagccattctttctagatttgctgc 1153 Query: 327 atagggcataggtacatcagctccggcaatcctctcaactggtgcgtcaagatactcaaa 386 ||| ||||| || || ||||| || | ||||||||||||||||| |||||||| ||||| Sbjct: 1152 atatggcatcggaacgtcagccccagatatcctctcaactggtgcatcaagatattcaaa 1093 Query: 387 gctgtcctccacaacggacatgcatatttcagcaccaacaccatgttgtggaaagccttc 446 || ||||| || || || || || ||||| ||||| || |||||||| || ||||| Sbjct: 1092 actttcctcaaccacagaagcacagatctcagctccaacgccgtgttgtgggaacccttc 1033 Query: 447 ttcaacggtta 457 |||||| |||| Sbjct: 1032 ttcaacagtta 1022
>dbj|AB026637.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16E14 Length = 8850 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 427 ccatgttgtggaaagccttcttcaacggttaccaatctattggttttcctaacggatgca 486 ||||||||||| || ||||||||||| |||||||||||| | |||||||| || || ||| Sbjct: 3951 ccatgttgtgggaaaccttcttcaactgttaccaatctactcgttttcctcactgaagca 3892 Query: 487 ttgat 491 ||||| Sbjct: 3891 ttgat 3887 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 291 aacctggggaactgccaatctttcaaggtttgccgcatagggcataggtacatcagctcc 350 |||||| |||| |||||||| || ||||| || ||||| ||||| || ||||||||||| Sbjct: 4184 aacctgaggaagagccaatctctctaggttagctgcatacggcattggaacatcagctcc 4125 Query: 351 ggcaatcctctcaactggtgc 371 ||||||||||| || ||||| Sbjct: 4124 tgcaatcctctcgaccggtgc 4104
>ref|XM_780098.1| PREDICTED: Strongylocentrotus purpuratus similar to pyruvate dehydrogenase (lipoamide) beta (LOC580017), mRNA Length = 1197 Score = 48.1 bits (24), Expect = 0.038 Identities = 27/28 (96%) Strand = Plus / Minus Query: 325 gcatagggcataggtacatcagctccgg 352 ||||||||||| |||||||||||||||| Sbjct: 1004 gcatagggcatgggtacatcagctccgg 977
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 408 gcatatttcagcaccaacacca 429 |||||||||||||||||||||| Sbjct: 61692 gcatatttcagcaccaacacca 61713
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 408 gcatatttcagcaccaacacca 429 |||||||||||||||||||||| Sbjct: 1843862 gcatatttcagcaccaacacca 1843883
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 408 gcatatttcagcaccaacacca 429 |||||||||||||||||||||| Sbjct: 1841583 gcatatttcagcaccaacacca 1841604
>gb|AE013037.1| Thermoanaerobacter tengcongensis MB4, section 64 of 244 of the complete genome Length = 11389 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 610 attgtaacatcttttccttcccgtt 634 |||| |||||||||||||||||||| Sbjct: 5644 attgaaacatcttttccttcccgtt 5620
>emb|AL138823.14| Human DNA sequence from clone RP11-64J21 on chromosome 13 Contains part of a novel gene similar to tumour-associated hydroquinone (NADH) oxidase TNOX, a ribosomal protein L36 (RPL36) pseudogene and a CpG island, complete sequence Length = 175112 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cttttctggacaaggaacaaa 190 ||||||||||||||||||||| Sbjct: 26274 cttttctggacaaggaacaaa 26294
>emb|AL109920.15|HSDJ335E1 Human DNA sequence from clone RP3-335E1 on chromosome 6q16.2-21 Contains a CpG island, complete sequence Length = 143805 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 638 tcttagctttgccaaattggg 658 ||||||||||||||||||||| Sbjct: 74821 tcttagctttgccaaattggg 74841
>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome Length = 1581384 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 304 gccaatctttcaaggtttgccgcatagggcataggtacatc 344 |||||| ||||||| ||||||||||| ||||| || ||||| Sbjct: 600009 gccaatttttcaagatttgccgcataaggcatgggaacatc 599969
>gb|AC108128.2| Homo sapiens chromosome 5 clone RP11-755E13, complete sequence Length = 119387 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 aatcaacaatgcagcatgcag 114 ||||||||||||||||||||| Sbjct: 99535 aatcaacaatgcagcatgcag 99515
>gb|AC093221.3| Homo sapiens chromosome 5 clone CTD-2181C22, complete sequence Length = 139833 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 aatcaacaatgcagcatgcag 114 ||||||||||||||||||||| Sbjct: 3189 aatcaacaatgcagcatgcag 3169
>gb|AC025227.6|AC025227 Homo sapiens BAC clone RP11-109G18 from Y, complete sequence Length = 60810 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ggacaaggaacaaagaagaag 197 ||||||||||||||||||||| Sbjct: 18433 ggacaaggaacaaagaagaag 18453
>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2 (P1-P2-P3-IR2@) on chromosome Y Length = 4538292 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ggacaaggaacaaagaagaag 197 ||||||||||||||||||||| Sbjct: 409224 ggacaaggaacaaagaagaag 409244
>ref|XM_493883.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2211 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 tctctgcagcctgaagagca 582 |||||||||||||||||||| Sbjct: 370 tctctgcagcctgaagagca 351
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 tctctgcagcctgaagagca 582 |||||||||||||||||||| Sbjct: 46371 tctctgcagcctgaagagca 46390
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 610 attgtaacatcttttccttc 629 |||||||||||||||||||| Sbjct: 7003471 attgtaacatcttttccttc 7003452
>gb|AC004111.1| Homo sapiens BAC clone CTB-103H13 from 7, complete sequence Length = 106172 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gttgcatgattcaaatgtct 41 |||||||||||||||||||| Sbjct: 61712 gttgcatgattcaaatgtct 61731
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tgccgccattgatgatgatc 253 |||||||||||||||||||| Sbjct: 127873 tgccgccattgatgatgatc 127854
>emb|CR723110.2|CNS0GKWC Tetraodon nigroviridis full-length cDNA Length = 222 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 ccttggacagtatctctgca 570 |||||||||||||||||||| Sbjct: 140 ccttggacagtatctctgca 159
>emb|CR718905.2|CNS0GHNJ Tetraodon nigroviridis full-length cDNA Length = 214 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 ccttggacagtatctctgca 570 |||||||||||||||||||| Sbjct: 132 ccttggacagtatctctgca 151
>emb|CR716507.2|CNS0GFT0 Tetraodon nigroviridis full-length cDNA Length = 475 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 ccttggacagtatctctgca 570 |||||||||||||||||||| Sbjct: 136 ccttggacagtatctctgca 155
>emb|CR701534.2|CNS0G496 Tetraodon nigroviridis full-length cDNA Length = 777 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 ccttggacagtatctctgca 570 |||||||||||||||||||| Sbjct: 136 ccttggacagtatctctgca 155
>emb|CR699494.2|CNS0G2OI Tetraodon nigroviridis full-length cDNA Length = 782 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 ccttggacagtatctctgca 570 |||||||||||||||||||| Sbjct: 141 ccttggacagtatctctgca 160
>emb|CR645022.1|CNS0EWO4 Tetraodon nigroviridis full-length cDNA Length = 986 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 ccttggacagtatctctgca 570 |||||||||||||||||||| Sbjct: 116 ccttggacagtatctctgca 135
>emb|AL359180.17| Human DNA sequence from clone RP11-320G21 on chromosome 13, complete sequence Length = 159229 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 183 ggaacaaagaagaaggccgagaaacaaa 210 |||||| | ||||||||||||||||||| Sbjct: 47328 ggaacagaaaagaaggccgagaaacaaa 47355
>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2 Length = 223670 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcaagctcgctttgctgcgc 277 |||||||||||||||||||| Sbjct: 172166 gcaagctcgctttgctgcgc 172147 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gcaagctcgctttgctgcgc 277 |||||||||||||||||||| Sbjct: 99577 gcaagctcgctttgctgcgc 99596
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gcaagctcgctttgctgcgc 277 |||||||||||||||||||| Sbjct: 3177364 gcaagctcgctttgctgcgc 3177383
>emb|AL627222.10| Mouse DNA sequence from clone RP23-265A5 on chromosome 11 Contains a novel gene, the Tac4 gene for tachykinin, the Myst2 gene for MYST histone acetyltransferase 2, two novel genes, the 5' end of the gene for the likely ortholog of H. sapiens C/EBP-induced protein (5730593F17Rik) and a CpG island, complete sequence Length = 185645 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tggggaactgccaatctttc 314 |||||||||||||||||||| Sbjct: 9381 tggggaactgccaatctttc 9362
>emb|CR352263.9| Zebrafish DNA sequence from clone CH211-120M16 in linkage group 3, complete sequence Length = 165166 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 ctggacaaggaacaaagaagaagg 198 ||||| |||||||||||||||||| Sbjct: 33287 ctggagaaggaacaaagaagaagg 33264
>emb|BX511204.3|RN187K23 Rattus norvegicus chromosome 1 BAC RP32-187K23, complete sequence Length = 157991 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 649 ccaaattgggacactgaagc 668 |||||||||||||||||||| Sbjct: 77176 ccaaattgggacactgaagc 77195
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 610 attgtaacatcttttccttc 629 |||||||||||||||||||| Sbjct: 78894 attgtaacatcttttccttc 78913
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 tcttagagaatgcagtaatt 612 |||||||||||||||||||| Sbjct: 165994 tcttagagaatgcagtaatt 166013
>ref|XM_687995.1| PREDICTED: Danio rerio similar to lemur tyrosine kinase 2 (LOC564666), mRNA Length = 4548 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 ctggacaaggaacaaagaagaagg 198 ||||| |||||||||||||||||| Sbjct: 3770 ctggagaaggaacaaagaagaagg 3793
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence Length = 151589 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 tctctgcagcctgaagagca 582 |||||||||||||||||||| Sbjct: 128770 tctctgcagcctgaagagca 128789
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 tctctgcagcctgaagagca 582 |||||||||||||||||||| Sbjct: 528972 tctctgcagcctgaagagca 528991
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 610 attgtaacatcttttccttc 629 |||||||||||||||||||| Sbjct: 7001366 attgtaacatcttttccttc 7001347
>emb|BX004760.10| Zebrafish DNA sequence from clone CH211-222O4 in linkage group 3, complete sequence Length = 190220 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 ctggacaaggaacaaagaagaagg 198 ||||| |||||||||||||||||| Sbjct: 54266 ctggagaaggaacaaagaagaagg 54243
>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome Length = 1080084 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 598 gagaatgcagtaattgtaacatcttttccttcccgt 633 ||||| |||||||| || ||||| |||||||||||| Sbjct: 869170 gagaaagcagtaatagttacatcctttccttcccgt 869135
>gb|AC132091.3| Mus musculus BAC clone RP24-465H15 from 18, complete sequence Length = 140256 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 aaacaaaacatgcatttgtg 223 |||||||||||||||||||| Sbjct: 71848 aaacaaaacatgcatttgtg 71829
>gb|AC135290.5| Mus musculus BAC clone RP23-58D13 from 18, complete sequence Length = 233915 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 aaacaaaacatgcatttgtg 223 |||||||||||||||||||| Sbjct: 220648 aaacaaaacatgcatttgtg 220667
>emb|AL831794.6| Mouse DNA sequence from clone RP23-114B13 on chromosome 2, complete sequence Length = 223128 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 604 gcagtaattgtaacatcttt 623 |||||||||||||||||||| Sbjct: 14248 gcagtaattgtaacatcttt 14229
>emb|Z46387.1|ATPVTD A.terreus gene for putative pyruvate dehydrogenase Length = 400 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 cgaaggttgatcacctcagc 539 |||||||||||||||||||| Sbjct: 264 cgaaggttgatcacctcagc 245 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,688,437 Number of Sequences: 3902068 Number of extensions: 5688437 Number of successful extensions: 102957 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102458 Number of HSP's gapped (non-prelim): 489 length of query: 685 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 662 effective length of database: 17,143,297,704 effective search space: 11348863080048 effective search space used: 11348863080048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
