>ref|NM_187745.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1413

 Score =  161 bits (81), Expect = 4e-36
 Identities = 192/229 (83%)
 Strand = Plus / Minus

                                                                        
Query: 457  actgaaacttcaggacagactgagcatccttcaatcaattcggtccacgtttttccttcc 516
            ||||||||||||| ||||| ||| | | |||||||||| ||| ||||||   |  | |||
Sbjct: 1289 actgaaacttcagaacagaatgaacttgcttcaatcaactcgctccacggcgtatcgtcc 1230

                                                                        
Query: 517  tcgttgagatcagattctctcaagagattcagtactttatctaggtgagcgacattcctg 576
            || |||| ||  |||||||||||||| |  | ||||||||| |||||||| |||||||  
Sbjct: 1229 tcattgatattggattctctcaagagttgtaatactttatccaggtgagcaacattccga 1170

                                                                        
Query: 577  cctgctccacatccagtggcggtagcagcaccgactgcatttgctagtgctagtgtgcta 636
            ||||| ||||| |||||||| || |||||||| ||||||||||||||||  |||||||||
Sbjct: 1169 cctgccccacagccagtggcagttgcagcacccactgcatttgctagtgtcagtgtgcta 1110

                                                             
Query: 637  atcgctggcaagtcatggaggaacccaaaagctatagcagcagtgaagc 685
            |  ||||||||||  ||||||||||||||||||||||||||||| ||||
Sbjct: 1109 actgctggcaagttgtggaggaacccaaaagctatagcagcagtaaagc 1061

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  161 bits (81), Expect = 4e-36
 Identities = 192/229 (83%)
 Strand = Plus / Minus

                                                                           
Query: 457     actgaaacttcaggacagactgagcatccttcaatcaattcggtccacgtttttccttcc 516
               ||||||||||||| ||||| ||| | | |||||||||| ||| ||||||   |  | |||
Sbjct: 3463439 actgaaacttcagaacagaatgaacttgcttcaatcaactcgctccacggcgtatcgtcc 3463380

                                                                           
Query: 517     tcgttgagatcagattctctcaagagattcagtactttatctaggtgagcgacattcctg 576
               || |||| ||  |||||||||||||| |  | ||||||||| |||||||| |||||||  
Sbjct: 3463379 tcattgatattggattctctcaagagttgtaatactttatccaggtgagcaacattccga 3463320

                                                                           
Query: 577     cctgctccacatccagtggcggtagcagcaccgactgcatttgctagtgctagtgtgcta 636
               ||||| ||||| |||||||| || |||||||| ||||||||||||||||  |||||||||
Sbjct: 3463319 cctgccccacagccagtggcagttgcagcacccactgcatttgctagtgtcagtgtgcta 3463260

                                                                
Query: 637     atcgctggcaagtcatggaggaacccaaaagctatagcagcagtgaagc 685
               |  ||||||||||  ||||||||||||||||||||||||||||| ||||
Sbjct: 3463259 actgctggcaagttgtggaggaacccaaaagctatagcagcagtaaagc 3463211

>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12,
             complete sequence
          Length = 103330

 Score =  161 bits (81), Expect = 4e-36
 Identities = 192/229 (83%)
 Strand = Plus / Plus

                                                                         
Query: 457   actgaaacttcaggacagactgagcatccttcaatcaattcggtccacgtttttccttcc 516
             ||||||||||||| ||||| ||| | | |||||||||| ||| ||||||   |  | |||
Sbjct: 46936 actgaaacttcagaacagaatgaacttgcttcaatcaactcgctccacggcgtatcgtcc 46995

                                                                         
Query: 517   tcgttgagatcagattctctcaagagattcagtactttatctaggtgagcgacattcctg 576
             || |||| ||  |||||||||||||| |  | ||||||||| |||||||| |||||||  
Sbjct: 46996 tcattgatattggattctctcaagagttgtaatactttatccaggtgagcaacattccga 47055

                                                                         
Query: 577   cctgctccacatccagtggcggtagcagcaccgactgcatttgctagtgctagtgtgcta 636
             ||||| ||||| |||||||| || |||||||| ||||||||||||||||  |||||||||
Sbjct: 47056 cctgccccacagccagtggcagttgcagcacccactgcatttgctagtgtcagtgtgcta 47115

                                                              
Query: 637   atcgctggcaagtcatggaggaacccaaaagctatagcagcagtgaagc 685
             |  ||||||||||  ||||||||||||||||||||||||||||| ||||
Sbjct: 47116 actgctggcaagttgtggaggaacccaaaagctatagcagcagtaaagc 47164

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  161 bits (81), Expect = 4e-36
 Identities = 192/229 (83%)
 Strand = Plus / Minus

                                                                           
Query: 457     actgaaacttcaggacagactgagcatccttcaatcaattcggtccacgtttttccttcc 516
               ||||||||||||| ||||| ||| | | |||||||||| ||| ||||||   |  | |||
Sbjct: 3463550 actgaaacttcagaacagaatgaacttgcttcaatcaactcgctccacggcgtatcgtcc 3463491

                                                                           
Query: 517     tcgttgagatcagattctctcaagagattcagtactttatctaggtgagcgacattcctg 576
               || |||| ||  |||||||||||||| |  | ||||||||| |||||||| |||||||  
Sbjct: 3463490 tcattgatattggattctctcaagagttgtaatactttatccaggtgagcaacattccga 3463431

                                                                           
Query: 577     cctgctccacatccagtggcggtagcagcaccgactgcatttgctagtgctagtgtgcta 636
               ||||| ||||| |||||||| || |||||||| ||||||||||||||||  |||||||||
Sbjct: 3463430 cctgccccacagccagtggcagttgcagcacccactgcatttgctagtgtcagtgtgcta 3463371

                                                                
Query: 637     atcgctggcaagtcatggaggaacccaaaagctatagcagcagtgaagc 685
               |  ||||||||||  ||||||||||||||||||||||||||||| ||||
Sbjct: 3463370 actgctggcaagttgtggaggaacccaaaagctatagcagcagtaaagc 3463322

>emb|CR354380.7| Zebrafish DNA sequence from clone CH211-182L2 in linkage group 1,
              complete sequence
          Length = 165344

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 452    acataactgaaacttcaggaca 473
              ||||||||||||||||||||||
Sbjct: 126781 acataactgaaacttcaggaca 126760

>emb|BX005068.13| Zebrafish DNA sequence from clone DKEY-40H17 in linkage group 1,
             complete sequence
          Length = 215007

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 452   acataactgaaacttcaggaca 473
             ||||||||||||||||||||||
Sbjct: 97976 acataactgaaacttcaggaca 97997

>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 461    aaacttcaggacagactgagc 481
              |||||||||||||||||||||
Sbjct: 721610 aaacttcaggacagactgagc 721590

>gb|DQ099103.1| Arachis stenosperma clone AS1RN20B09 microsatellite sequence
          Length = 756

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 233 tcacctgagagcagcagcatgatga 257
           ||||| |||||||||||||||||||
Sbjct: 111 tcaccagagagcagcagcatgatga 135

>ref|NM_174064.2| Bos taurus GDP dissociation inhibitor 1 (GDI1), mRNA
          Length = 1451

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 203 actgaagccttggcttccaac 223
           |||||||||||||||||||||
Sbjct: 435 actgaagccttggcttccaac 455

>dbj|D90103.1|BOVGDI Bos taurus smg p25A mRNA for GTP-binding protein, complete cds
          Length = 1451

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 203 actgaagccttggcttccaac 223
           |||||||||||||||||||||
Sbjct: 435 actgaagccttggcttccaac 455

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    agagcagcagcatgatgaac 259
              ||||||||||||||||||||
Sbjct: 131133 agagcagcagcatgatgaac 131114

>gb|AC183617.3| Pan troglodytes BAC clone CH251-104G17 from chromosome 4, complete
             sequence
          Length = 172744

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   tcactgaagccttggcttcc 220
             ||||||||||||||||||||
Sbjct: 94839 tcactgaagccttggcttcc 94858

>emb|AM085382.1| Aphis veratri mitochondrial partial CytB gene for cytochrome B,
           specimen voucher C565/ACDA 1829-1842
          Length = 719

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 167 ttgataaaatcacattctca 186
           ||||||||||||||||||||
Sbjct: 514 ttgataaaatcacattctca 533

>gb|AY365193.1| Lampsilis ornata mitochondrion, complete genome
          Length = 16060

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    aaagggaaaactaccaaaat 108
             ||||||||||||||||||||
Sbjct: 12197 aaagggaaaactaccaaaat 12216

>emb|Z75529.1|CEC44H9 Caenorhabditis elegans Cosmid C44H9, complete sequence
          Length = 28684

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 541  agattcagtactttatctag 560
            ||||||||||||||||||||
Sbjct: 1743 agattcagtactttatctag 1762

>emb|AL358975.8| Human DNA sequence from clone RP11-375O18 on chromosome 9 Contains a
             novel gene, the 5' end of the TLE4 gene for
             transducin-like enhancer of split 4 (E(sp1) homolog,
             Drosophila) (ESG4) and a CpG island, complete sequence
          Length = 196337

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   tcactgaagccttggcttcc 220
             ||||||||||||||||||||
Sbjct: 90272 tcactgaagccttggcttcc 90253

>emb|AL035603.11|HS179E13 Human DNA sequence from clone RP1-179E13 on chromosome 6q22.1-22.33
             Contains ribosomal protein S4, X-linked (cell cycle gene
             2, single-copy abundant mRNA, ribosomal protein S4X
             variant, 40S ribosomal protein S4, X variant)
             (RPS4X)(CCG2, SCAR, SCR10, DXS306) pseudogene, complete
             sequence
          Length = 138443

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   aagaaaaatacaacaatcta 314
             ||||||||||||||||||||
Sbjct: 90986 aagaaaaatacaacaatcta 91005

>emb|AL592551.10| Mouse DNA sequence from clone RP23-12I13 on chromosome 11, complete
             sequence
          Length = 215657

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   tcactgaagccttggcttcc 220
             ||||||||||||||||||||
Sbjct: 82551 tcactgaagccttggcttcc 82532

>gb|AC109439.3| Homo sapiens chromosome 5 clone CTB-1I21, complete sequence
          Length = 153667

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    tcactgaagccttggcttcc 220
              ||||||||||||||||||||
Sbjct: 143317 tcactgaagccttggcttcc 143298

>gb|AC093019.2| Homo sapiens chromosome 1 clone RP4-714D9, complete sequence
          Length = 116911

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   tcactgaagccttggcttcc 220
             ||||||||||||||||||||
Sbjct: 74899 tcactgaagccttggcttcc 74918

>ref|NM_073810.2| Caenorhabditis elegans C44H9.1 (UDP-glucuronosyltransferase) mRNA,
           complete cds
          Length = 1690

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 541 agattcagtactttatctag 560
           ||||||||||||||||||||
Sbjct: 560 agattcagtactttatctag 579

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 446      tctttgacataactgaaact 465
                ||||||||||||||||||||
Sbjct: 35972812 tctttgacataactgaaact 35972793

>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031D11
          Length = 138108

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   tctttgacataactgaaact 465
             ||||||||||||||||||||
Sbjct: 71490 tctttgacataactgaaact 71471

>gb|AC026336.20| Homo sapiens 12 BAC RP11-143E21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 169758

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   catcacctgagagcagcagc 250
             ||||||||||||||||||||
Sbjct: 86413 catcacctgagagcagcagc 86432

>gb|AC005188.1|AC005188 Homo sapiens PAC clone RP1-17P5 from 5q31, complete sequence
          Length = 114918

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   tcactgaagccttggcttcc 220
             ||||||||||||||||||||
Sbjct: 61736 tcactgaagccttggcttcc 61755

>gb|AC006291.1|AC006291 Homo sapiens chromosome 5, Pac clone 77e13 (LBNL H128), complete
            sequence
          Length = 34445

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  tcactgaagccttggcttcc 220
            ||||||||||||||||||||
Sbjct: 7473 tcactgaagccttggcttcc 7492

>emb|Z68493.1|CEC33A12 Caenorhabditis elegans Cosmid C33A12, complete sequence
          Length = 42297

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  cggattgtaaagaaaaatac 305
            ||||||||||||||||||||
Sbjct: 6960 cggattgtaaagaaaaatac 6941


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,677,096
Number of Sequences: 3902068
Number of extensions: 5677096
Number of successful extensions: 108727
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108574
Number of HSP's gapped (non-prelim): 153
length of query: 685
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 662
effective length of database: 17,143,297,704
effective search space: 11348863080048
effective search space used: 11348863080048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)