ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags13l05 |
|---|---|
| Clone Library Name | barley_pub |
>MAF1_HUMAN (Q9H063) Repressor of RNA polymerase III transcription MAF1 homolog| Length = 256 Score = 82.0 bits (201), Expect = 1e-15 Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 3/91 (3%) Frame = -2 Query: 606 AARNEGSSLLDSMTKAIDEVIKIRECDIYSYNPDSDGDPFLETGAIWSVNFFFYHRKLKR 427 A R + L + A+DE I + ECDIYSYNPD D DPF E G++WS N+FFY+++LKR Sbjct: 138 AVREDFKDLKPQLWNAVDEEICLAECDIYSYNPDLDSDPFGEDGSLWSFNYFFYNKRLKR 197 Query: 426 VVSFRCCCTSKFAGDDFLAGALSD---GEEE 343 +V F C S AG D GEEE Sbjct: 198 IVFFSCRSISGSTYTPSEAGNELDMELGEEE 228
>MAF1_MOUSE (Q9D0U6) Repressor of RNA polymerase III transcription MAF1 homolog| Length = 258 Score = 82.0 bits (201), Expect = 1e-15 Identities = 35/66 (53%), Positives = 47/66 (71%) Frame = -2 Query: 606 AARNEGSSLLDSMTKAIDEVIKIRECDIYSYNPDSDGDPFLETGAIWSVNFFFYHRKLKR 427 A R + +L + A+DE I + ECDIYSYNPD D DPF E G++WS N+FFY+++LKR Sbjct: 138 AVREDFKALKPQLWNAVDEEICLAECDIYSYNPDLDSDPFGEDGSLWSFNYFFYNKRLKR 197 Query: 426 VVSFRC 409 +V F C Sbjct: 198 IVFFSC 203
>MAF1_BRARE (Q6PGU2) Repressor of RNA polymerase III transcription MAF1 homolog| Length = 247 Score = 79.3 bits (194), Expect = 8e-15 Identities = 36/72 (50%), Positives = 48/72 (66%) Frame = -2 Query: 606 AARNEGSSLLDSMTKAIDEVIKIRECDIYSYNPDSDGDPFLETGAIWSVNFFFYHRKLKR 427 AA S L + +A+D+ I + ECDIYSYNPD D DP+ E G +WS N+FFY+++LKR Sbjct: 137 AAGEAYSHLQPQLWEALDKEISLAECDIYSYNPDLDSDPYGEEGNLWSFNYFFYNKRLKR 196 Query: 426 VVSFRCCCTSKF 391 +V F C S F Sbjct: 197 IVFFTCRSVSLF 208
>YEJC_SCHPO (O14109) Hypothetical protein C31G5.12c in chromosome I| Length = 215 Score = 55.8 bits (133), Expect = 9e-08 Identities = 20/57 (35%), Positives = 38/57 (66%) Frame = -2 Query: 591 GSSLLDSMTKAIDEVIKIRECDIYSYNPDSDGDPFLETGAIWSVNFFFYHRKLKRVV 421 G ++ + + ID I + +C +YSY PDSD DP+ + IW +++FF+++ +KR++ Sbjct: 112 GRLSVNGIWEIIDRHINLSDCSVYSYTPDSDSDPYGDDALIWGMSYFFFNKNMKRML 168
>MAF1_ASHGO (Q757K3) Repressor of RNA polymerase III transcription MAF1| Length = 397 Score = 35.4 bits (80), Expect = 0.13 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Frame = -2 Query: 564 KAIDEVIKIRECDIYSYNPDSDGDPFL--ETGAIWSVNFFFYHRKLKRVVSF 415 + I+ + + +C Y YNP + FL E G +WS+ +F +++K KRV F Sbjct: 275 ETINAHMDLADCVFYQYNPQ---ESFLDDEPGHLWSLMWFMFNKKRKRVAYF 323
>MAF1_YEAST (P41910) Repressor of RNA polymerase III transcription MAF1| Length = 395 Score = 35.0 bits (79), Expect = 0.17 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Frame = -2 Query: 564 KAIDEVIKIRECDIYSYNPDSDGDPFLET--GAIWSVNFFFYHRKLKRVVSFRCCCTSKF 391 + I+ + + +C ++ Y+P + FLE G +W++ F Y+RK KRV C+ Sbjct: 288 EVINSHMTLSDCVLFQYSPSNS---FLEDEPGYLWNLIGFLYNRKRKRVAYLYLICSRLN 344 Query: 390 AGDDFLAGALSDGEEEDAL 334 + S GE EDAL Sbjct: 345 S---------STGEVEDAL 354
>FZD7_HUMAN (O75084) Frizzled 7 precursor (Frizzled-7) (Fz-7) (hFz7) (FzE3)| Length = 574 Score = 32.0 bits (71), Expect = 1.4 Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Frame = +3 Query: 204 GTASIRSFLPGTVAIRAVYYTN--RSHWLVGHVPSRTKSVICPCRSTHLPPRHP 359 G S+ +P T+ + +Y R HW + KS PC H PP P Sbjct: 472 GVFSVLYTVPATIVLACYFYEQAFREHWERTWLLQTCKSYAVPCPPGHFPPMSP 525
>FLGE_AQUAE (O67711) Flagellar hook protein flgE| Length = 482 Score = 31.2 bits (69), Expect = 2.4 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +1 Query: 244 PYELYITQTGHTGWLVMFLAEPSQSYVHVD 333 P ++Y +TG W V FLA + Y++VD Sbjct: 214 PADIYFVKTGTNQWKVYFLASLKERYINVD 243
>MAF1_CANGA (Q6FIZ7) Repressor of RNA polymerase III transcription MAF1| Length = 391 Score = 31.2 bits (69), Expect = 2.4 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = -2 Query: 564 KAIDEVIKIRECDIYSYNPDSDGDPFL--ETGAIWSVNFFFYHRKLKRV 424 + I+ + + +C +Y Y P FL E G +WS+ FF+++K KRV Sbjct: 280 EVINSHMTLSDCVLYQYCPTQS---FLDDEPGHLWSLIGFFFNKKRKRV 325
>FZD2_HUMAN (Q14332) Frizzled 2 precursor (Frizzled-2) (Fz-2) (hFz2) (FzE2)| Length = 565 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +3 Query: 204 GTASIRSFLPGTVAIRAVYYTN--RSHWLVGHVPSRTKSVICPCRSTHLPPRHP 359 G S+ +P T+ I +Y R HW V KS+ PC + + P P Sbjct: 463 GVFSVLYTVPATIVIACYFYEQAFREHWERSWVSQHCKSLAIPCPAHYTPRMSP 516
>FZD2_RAT (Q08464) Frizzled 2 precursor (Frizzled-2) (Fz-2) (rFz2)| Length = 570 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +3 Query: 204 GTASIRSFLPGTVAIRAVYYTN--RSHWLVGHVPSRTKSVICPCRSTHLPPRHP 359 G S+ +P T+ I +Y R HW V KS+ PC + + P P Sbjct: 468 GVFSVLYTVPATIVIACYFYEQAFREHWERSWVSQHCKSLAIPCPAHYTPRTSP 521
>FZD2_MOUSE (Q9JIP6) Frizzled 2 precursor (Frizzled-2) (Fz-2) (mFz2) (mFz10)| Length = 570 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +3 Query: 204 GTASIRSFLPGTVAIRAVYYTN--RSHWLVGHVPSRTKSVICPCRSTHLPPRHP 359 G S+ +P T+ I +Y R HW V KS+ PC + + P P Sbjct: 468 GVFSVLYTVPATIVIACYFYEQAFREHWERSWVSQHCKSLAIPCPAHYTPRMSP 521
>FZD1_XENLA (Q9I9M5) Frizzled 1 precursor (Frizzled-1) (Fz-1) (Xfz1)| Length = 559 Score = 30.4 bits (67), Expect = 4.2 Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Frame = +3 Query: 204 GTASIRSFLPGTVAIRAVYYTN--RSHWLVGHVPSRTKSVICPCRSTHLPPRHP 359 G S+ +P T+ I +Y R W + K+ PC ST PP P Sbjct: 457 GIFSVLYTVPATIVIACYFYEQAFREQWEKSWISQSCKTYAIPCPSTGHPPMSP 510
>FZD2_XENLA (Q9PUU6) Frizzled 2 precursor (Frizzled-2) (Fz-2) (Xfz2)| Length = 551 Score = 30.0 bits (66), Expect = 5.4 Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Frame = +3 Query: 204 GTASIRSFLPGTVAIRAVYYTN--RSHWLVGHVPSRTKSVICPCRSTHLPPRHP 359 G S+ +P T+ I +Y R HW V KS+ PC + P P Sbjct: 449 GVFSVLYTVPATIVIACYFYEQAFREHWERSWVSQNCKSLAIPCPLQYTPRMTP 502
>FZD2_CHICK (Q9IA06) Frizzled 2 (Frizzled-2) (Fz-2) (cFz-2) (Fragment)| Length = 523 Score = 29.6 bits (65), Expect = 7.1 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Frame = +3 Query: 204 GTASIRSFLPGTVAIRAVYYTN--RSHWLVGHVPSRTKSVICPCRSTHLPPR 353 G S+ +P T+ I +Y R HW + KS+ PC H PR Sbjct: 421 GVFSVLYTVPATIVIACYFYEQAFRQHWERSWISQHCKSLAIPC-PLHFTPR 471
>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Xsiah-2) Length = 313 Score = 29.3 bits (64), Expect = 9.3 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = +1 Query: 349 LAIRERTSKEIIPCKFASTAAAKAHYPLELPVVEEKVD-RPYG-PC 480 LA+ + S + PCK+AST + + + E P E+ + RPY PC Sbjct: 114 LAMEKVASAVLFPCKYASTGCSLSLHHTEKPEHEDICEYRPYSCPC 159
>Y498_BUCBP (Q89A47) Hypothetical protein bbp_498| Length = 374 Score = 29.3 bits (64), Expect = 9.3 Identities = 10/44 (22%), Positives = 25/44 (56%), Gaps = 5/44 (11%) Frame = -2 Query: 264 CNIQLVWRQFPVGNYVCWQ-----FPVETFSVTLFVCLESIHFW 148 CN+ ++W+ F G + + + + ++S T + CL ++++W Sbjct: 209 CNLNIIWKIFLQGEKLLKKSGYKKYEISSYSKTNYQCLHNLNYW 252
>FZD7_MOUSE (Q61090) Frizzled 7 precursor (Frizzled-7) (Fz-7) (mFz7)| Length = 572 Score = 29.3 bits (64), Expect = 9.3 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 2/54 (3%) Frame = +3 Query: 204 GTASIRSFLPGTVAIRAVYYTN--RSHWLVGHVPSRTKSVICPCRSTHLPPRHP 359 G S+ +P T+ + +Y R HW + KS PC H P P Sbjct: 470 GVFSVLYTVPATIVLACYFYEQAFREHWERTWLLQTCKSYAVPCPPRHFSPMSP 523 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,182,186 Number of Sequences: 219361 Number of extensions: 1918737 Number of successful extensions: 5359 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4953 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5357 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
