ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags14a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK120295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 3e-49
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 153 1e-33
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 153 1e-33
4emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial se... 153 1e-33
5gb|AF158635.1|AF158635 Triticum ventricosum V6 (V6) gene, partia... 50 0.010
6emb|AL669921.13| Mouse DNA sequence from clone RP23-67P9 on chro... 44 0.64
7ref|XM_531265.1| PREDICTED: Pan troglodytes LOC465243 (LOC465243... 42 2.5
8gb|AC102017.15| Mus musculus chromosome 5, clone RP24-571N6, com... 42 2.5
9gb|AY597776.1| Borrelia hermsii strain YOR variable tick protein... 42 2.5
10gb|AY597775.1| Borrelia hermsii strain REN variable tick protein... 42 2.5
11gb|AY597774.1| Borrelia hermsii strain OKA-3 variable tick prote... 42 2.5
12gb|AY597773.1| Borrelia hermsii strain OKA-2 variable tick prote... 42 2.5
13gb|AY597772.1| Borrelia hermsii strain OKA-1 variable tick prote... 42 2.5
14gb|AY597767.1| Borrelia hermsii strain RUM variable tick protein... 42 2.5
15gb|AY597766.1| Borrelia hermsii strain GMC variable tick protein... 42 2.5
16gb|AY597765.1| Borrelia hermsii strain CMC variable tick protein... 42 2.5
17gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete seq... 42 2.5
18ref|NM_005392.2| Homo sapiens PHD finger protein 2 (PHF2), trans... 42 2.5
19ref|NM_024517.1| Homo sapiens PHD finger protein 2 (PHF2), trans... 42 2.5
20gb|BC064613.1| Homo sapiens PHD finger protein 2, mRNA (cDNA clo... 42 2.5
21gb|AC117190.3| Mus musculus BAC clone RP23-55A21 from 2, complet... 42 2.5
22gb|AC146775.8| Medicago truncatula clone mth2-95g14, complete se... 42 2.5
23gb|BC050112.1| Homo sapiens PHD finger protein 2, mRNA (cDNA clo... 42 2.5
24emb|AL596284.4| Human DNA sequence from clone RP11-545D19 on chr... 42 2.5
25emb|AL359181.28| Human DNA sequence from clone RP11-392N11 on ch... 42 2.5
26emb|AL834263.1|HSM805295 Homo sapiens mRNA; cDNA DKFZp761K187 (f... 42 2.5
27emb|BX323587.5| Zebrafish DNA sequence from clone CH211-100L3, c... 42 2.5
28emb|CR622049.1| full-length cDNA clone CS0DF030YK18 of Fetal bra... 42 2.5
29gb|AC022272.6| Homo sapiens BAC clone RP11-563E2 from 4, complet... 42 2.5
30emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in... 42 2.5
31emb|AL954327.12| Zebrafish DNA sequence from clone DKEY-18H14 in... 42 2.5
32emb|AL929038.13| Zebrafish DNA sequence from clone DKEY-34D20 in... 42 2.5
33emb|AL929043.7| Mouse DNA sequence from clone RP23-58H6 on chrom... 42 2.5
34dbj|AB014562.2| Homo sapiens mRNA for KIAA0662 protein, partial cds 42 2.5
35gb|AC102469.7| Mus musculus chromosome 1, clone RP24-356O3, comp... 40 9.9
36gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome 40 9.9
37gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from... 40 9.9
38emb|CR376767.12| Zebrafish DNA sequence from clone DKEY-86A12 in... 40 9.9
39gb|AC124500.5| Mus musculus BAC clone RP24-69C19 from chromosome... 40 9.9
40ref|XM_650423.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 9.9
41emb|AL359175.10| Human DNA sequence from clone RP11-213K14 on ch... 40 9.9
42emb|AL356278.8| Human DNA sequence from clone RP11-515J24 on chr... 40 9.9
43gb|AC162861.2| Mus musculus chromosome 1, clone RP23-236B21, com... 40 9.9
44ref|XM_782926.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 9.9
45emb|CR380953.1| Candida glabrata strain CBS138 chromosome G comp... 40 9.9
46emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 40 9.9
47emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4,... 40 9.9
48emb|AJ543432.1|CGI543432 Crassostrea gigas Tld gene for Tolloid-... 40 9.9
49gb|AC149518.2| Xenopus tropicalis clone CH216-59A18, complete se... 40 9.9
50emb|BX950205.10| Zebrafish DNA sequence from clone CH211-226H8 i... 40 9.9
51gb|AF410153.1| Swinepox virus isolate 17077-99, complete genome 40 9.9
52gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer In... 40 9.9
53emb|BX321915.3| Zebrafish DNA sequence from clone CH211-250C19 i... 40 9.9
54emb|BX294102.9| Zebrafish DNA sequence from clone DKEY-257H21 in... 40 9.9
55dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
56gb|AC013441.9| Homo sapiens BAC clone RP11-310E6 from 2, complet... 40 9.9
57emb|BX855590.3| Zebrafish DNA sequence from clone CH211-245N8, c... 40 9.9
58emb|BX005383.8| Zebrafish DNA sequence from clone DKEYP-19E1 in ... 40 9.9
59emb|BX248122.10| Zebrafish DNA sequence from clone CH211-214C20 ... 40 9.9
60dbj|AK068428.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.9
61emb|AL445383.5|CNS07ECZ Human chromosome 14 DNA sequence BAC R-8... 40 9.9
62emb|BX908764.11| Zebrafish DNA sequence from clone DKEY-262O11 i... 40 9.9
63emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 9.9
64emb|Z81125.1|CET22A3 Caenorhabditis elegans Cosmid T22A3, comple... 40 9.9
65emb|CR318629.4| Zebrafish DNA sequence from clone DKEY-30I24 in ... 40 9.9
66emb|BX004853.7| Zebrafish DNA sequence from clone DKEY-13O11, co... 40 9.9
67gb|AC139322.4| Mus musculus BAC clone RP24-397L22 from 9, comple... 40 9.9
68emb|BX001051.29| Zebrafish DNA sequence from clone DKEYP-68F9 in... 40 9.9
69emb|CR962128.2| Medicago truncatula chromosome 5 clone mth2-2o11... 40 9.9
70emb|AJ627422.1| Uncultured crenarchaeote genomic fragment 54d9 40 9.9
71emb|AL669845.9| Mouse DNA sequence from clone RP23-43C21 on chro... 40 9.9
72emb|AL390097.2|CNS06C7L Human chromosome 14 DNA sequence BAC C-2... 40 9.9 
>dbj|AK120295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051E22, full
           insert sequence
          Length = 706

 Score =  204 bits (103), Expect = 3e-49
 Identities = 179/203 (88%), Gaps = 1/203 (0%)
 Strand = Plus / Minus

                                                                       
Query: 444 actttgaaatgtttttcagcaagcccgacaaagaaccacaatgtgttgatttgtactcgc 503
           |||| |||||||||||||  || || | ||||||||| || |||||||||||||||||||
Sbjct: 288 acttggaaatgtttttcaataatccagtcaaagaaccgcagtgtgttgatttgtactcgc 229

                                                                       
Query: 504 attgctcacaacaagattgtagtgactgaatgactttcaaacacttgttggaatcgaaga 563
           | |||||||| || ||||| ||| | || || ||| ||| ||| || ||||||||||| |
Sbjct: 228 actgctcacagcaggattgaagtaattggataactctcacacatttcttggaatcgaaca 169

                                                                       
Query: 564 ggttcttggagaggcaggcctggatgtcgcacgcctccttcttgcacggctccttgctcg 623
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 168 tgttcttggagaggcaggcctggatgtcgcacgcctccttcttgcacggctccttgctct 109

                                  
Query: 624 gctgcgccatctcgctcctcctc 646
           ||||||||||||| |||||||||
Sbjct: 108 gctgcgccatctc-ctcctcctc 87
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  153 bits (77), Expect = 1e-33
 Identities = 96/101 (95%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                           
Query: 546     acttgttggaatcgaagaggttcttggagaggcaggcctggatgtcgcacgcctccttct 605
               |||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4192543 acttcttggaatcgaacatgttcttggagaggcaggcctggatgtcgcacgcctccttct 4192602

                                                        
Query: 606     tgcacggctccttgctcggctgcgccatctcgctcctcctc 646
               ||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 4192603 tgcacggctccttgctctgctgcgccatctc-ctcctcctc 4192642



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                           
Query: 444     actttgaaatgtttttcagcaagcccgacaaagaaccacaatgtgttgatttgtactcgc 503
               |||| |||||||||||||  || || | ||||||||| || |||||||||||||||||||
Sbjct: 4191187 acttggaaatgtttttcaataatccagtcaaagaaccgcagtgtgttgatttgtactcgc 4191246

                                  
Query: 504     attgctcacaacaagattg 522
               | |||||||| || |||||
Sbjct: 4191247 actgctcacagcaggattg 4191265



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 224     aataattaagccaatcaaatagacgagcatgtgact 259
               ||||||| ||| ||||||| ||| ||||||||||||
Sbjct: 4190694 aataattcagctaatcaaacagaggagcatgtgact 4190729
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  153 bits (77), Expect = 1e-33
 Identities = 96/101 (95%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                           
Query: 546     acttgttggaatcgaagaggttcttggagaggcaggcctggatgtcgcacgcctccttct 605
               |||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4192530 acttcttggaatcgaacatgttcttggagaggcaggcctggatgtcgcacgcctccttct 4192589

                                                        
Query: 606     tgcacggctccttgctcggctgcgccatctcgctcctcctc 646
               ||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 4192590 tgcacggctccttgctctgctgcgccatctc-ctcctcctc 4192629



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                           
Query: 444     actttgaaatgtttttcagcaagcccgacaaagaaccacaatgtgttgatttgtactcgc 503
               |||| |||||||||||||  || || | ||||||||| || |||||||||||||||||||
Sbjct: 4191174 acttggaaatgtttttcaataatccagtcaaagaaccgcagtgtgttgatttgtactcgc 4191233

                                  
Query: 504     attgctcacaacaagattg 522
               | |||||||| || |||||
Sbjct: 4191234 actgctcacagcaggattg 4191252



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 224     aataattaagccaatcaaatagacgagcatgtgact 259
               ||||||| ||| ||||||| ||| ||||||||||||
Sbjct: 4190681 aataattcagctaatcaaacagaggagcatgtgact 4190716
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>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09
             of library OSJNBb from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 104999

 Score =  153 bits (77), Expect = 1e-33
 Identities = 96/101 (95%), Gaps = 1/101 (0%)
 Strand = Plus / Minus

                                                                         
Query: 546   acttgttggaatcgaagaggttcttggagaggcaggcctggatgtcgcacgcctccttct 605
             |||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 91240 acttcttggaatcgaacatgttcttggagaggcaggcctggatgtcgcacgcctccttct 91181

                                                      
Query: 606   tgcacggctccttgctcggctgcgccatctcgctcctcctc 646
             ||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 91180 tgcacggctccttgctctgctgcgccatctc-ctcctcctc 91141



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                         
Query: 444   actttgaaatgtttttcagcaagcccgacaaagaaccacaatgtgttgatttgtactcgc 503
             |||| |||||||||||||  || || | ||||||||| || |||||||||||||||||||
Sbjct: 92596 acttggaaatgtttttcaataatccagtcaaagaaccgcagtgtgttgatttgtactcgc 92537

                                
Query: 504   attgctcacaacaagattg 522
             | |||||||| || |||||
Sbjct: 92536 actgctcacagcaggattg 92518



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 224   aataattaagccaatcaaatagacgagcatgtgact 259
             ||||||| ||| ||||||| ||| ||||||||||||
Sbjct: 93089 aataattcagctaatcaaacagaggagcatgtgact 93054
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>gb|AF158635.1|AF158635 Triticum ventricosum V6 (V6) gene, partial cds
          Length = 5712

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 658  tttttgttgatagcttaccaagatgaccacttg 690
            |||||||| ||||||||||||| ||||||||||
Sbjct: 1729 tttttgttaatagcttaccaagctgaccacttg 1697
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>emb|AL669921.13| Mouse DNA sequence from clone RP23-67P9 on chromosome 2, complete
              sequence
          Length = 203592

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 211    aaaaagaaataccaataattaa 232
              ||||||||||||||||||||||
Sbjct: 143584 aaaaagaaataccaataattaa 143563
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>ref|XM_531265.1| PREDICTED: Pan troglodytes LOC465243 (LOC465243), mRNA
          Length = 765

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 684 ccacttgctcctcctctttct 704
           |||||||||||||||||||||
Sbjct: 116 ccacttgctcctcctctttct 96
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>gb|AC102017.15| Mus musculus chromosome 5, clone RP24-571N6, complete sequence
          Length = 119681

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 392   attcccaagcaaacctaaaat 412
             |||||||||||||||||||||
Sbjct: 37355 attcccaagcaaacctaaaat 37375
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>gb|AY597776.1| Borrelia hermsii strain YOR variable tick protein (vtp) gene,
           partial cds
          Length = 642

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 671 cttaccaagatgaccacttgctcct 695
           ||||||||||| |||||||||||||
Sbjct: 450 cttaccaagatcaccacttgctcct 426
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>gb|AY597775.1| Borrelia hermsii strain REN variable tick protein (vtp) gene,
           partial cds
          Length = 642

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 671 cttaccaagatgaccacttgctcct 695
           ||||||||||| |||||||||||||
Sbjct: 450 cttaccaagatcaccacttgctcct 426
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>gb|AY597774.1| Borrelia hermsii strain OKA-3 variable tick protein (vtp) gene,
           partial cds
          Length = 642

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 671 cttaccaagatgaccacttgctcct 695
           ||||||||||| |||||||||||||
Sbjct: 450 cttaccaagatcaccacttgctcct 426
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>gb|AY597773.1| Borrelia hermsii strain OKA-2 variable tick protein (vtp) gene,
           partial cds
          Length = 642

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 671 cttaccaagatgaccacttgctcct 695
           ||||||||||| |||||||||||||
Sbjct: 450 cttaccaagatcaccacttgctcct 426
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>gb|AY597772.1| Borrelia hermsii strain OKA-1 variable tick protein (vtp) gene,
           partial cds
          Length = 642

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 671 cttaccaagatgaccacttgctcct 695
           ||||||||||| |||||||||||||
Sbjct: 450 cttaccaagatcaccacttgctcct 426
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>gb|AY597767.1| Borrelia hermsii strain RUM variable tick protein (vtp) gene,
           partial cds
          Length = 642

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 671 cttaccaagatgaccacttgctcct 695
           ||||||||||| |||||||||||||
Sbjct: 450 cttaccaagatcaccacttgctcct 426
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>gb|AY597766.1| Borrelia hermsii strain GMC variable tick protein (vtp) gene,
           partial cds
          Length = 642

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 671 cttaccaagatgaccacttgctcct 695
           ||||||||||| |||||||||||||
Sbjct: 450 cttaccaagatcaccacttgctcct 426
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>gb|AY597765.1| Borrelia hermsii strain CMC variable tick protein (vtp) gene,
           partial cds
          Length = 642

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 671 cttaccaagatgaccacttgctcct 695
           ||||||||||| |||||||||||||
Sbjct: 450 cttaccaagatcaccacttgctcct 426
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>gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete sequence
          Length = 131049

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 683   accacttgctcctcctctttctttt 707
             |||||||| ||||||||||||||||
Sbjct: 75210 accacttgatcctcctctttctttt 75186
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>ref|NM_005392.2| Homo sapiens PHD finger protein 2 (PHF2), transcript variant 1, mRNA
          Length = 5279

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 684  ccacttgctcctcctctttct 704
            |||||||||||||||||||||
Sbjct: 3799 ccacttgctcctcctctttct 3779
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>ref|NM_024517.1| Homo sapiens PHD finger protein 2 (PHF2), transcript variant 2, mRNA
          Length = 5238

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 684  ccacttgctcctcctctttct 704
            |||||||||||||||||||||
Sbjct: 3797 ccacttgctcctcctctttct 3777
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>gb|BC064613.1| Homo sapiens PHD finger protein 2, mRNA (cDNA clone IMAGE:5579260),
            complete cds
          Length = 2981

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 684  ccacttgctcctcctctttct 704
            |||||||||||||||||||||
Sbjct: 1493 ccacttgctcctcctctttct 1473
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>gb|AC117190.3| Mus musculus BAC clone RP23-55A21 from 2, complete sequence
          Length = 189549

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 446   tttgaaatgtttttcagcaag 466
             |||||||||||||||||||||
Sbjct: 34626 tttgaaatgtttttcagcaag 34646
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>gb|AC146775.8| Medicago truncatula clone mth2-95g14, complete sequence
          Length = 139593

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 211   aaaaagaaataccaataattaagcc 235
             ||||||||||||||||| |||||||
Sbjct: 89623 aaaaagaaataccaatagttaagcc 89647
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>gb|BC050112.1| Homo sapiens PHD finger protein 2, mRNA (cDNA clone IMAGE:5268347)
          Length = 2505

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 684  ccacttgctcctcctctttct 704
            |||||||||||||||||||||
Sbjct: 1137 ccacttgctcctcctctttct 1117
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>emb|AL596284.4| Human DNA sequence from clone RP11-545D19 on chromosome X Contains part
             of a novel gene, complete sequence
          Length = 60079

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   catatcatagcacccacactg 289
             |||||||||||||||||||||
Sbjct: 53242 catatcatagcacccacactg 53222
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>emb|AL359181.28| Human DNA sequence from clone RP11-392N11 on chromosome 9 Contains the
             3' end of the PHF2 gene for PHD finger protein 2 (GRC5,
             KIAA0662), complete sequence
          Length = 165415

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 684   ccacttgctcctcctctttct 704
             |||||||||||||||||||||
Sbjct: 62836 ccacttgctcctcctctttct 62816
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>emb|AL834263.1|HSM805295 Homo sapiens mRNA; cDNA DKFZp761K187 (from clone DKFZp761K187)
          Length = 5252

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 684  ccacttgctcctcctctttct 704
            |||||||||||||||||||||
Sbjct: 3771 ccacttgctcctcctctttct 3751
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>emb|BX323587.5| Zebrafish DNA sequence from clone CH211-100L3, complete sequence
          Length = 90800

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 107   taaacaaacatgttgacaaac 127
             |||||||||||||||||||||
Sbjct: 64275 taaacaaacatgttgacaaac 64295
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>emb|CR622049.1| full-length cDNA clone CS0DF030YK18 of Fetal brain of Homo sapiens
           (human)
          Length = 1701

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 684 ccacttgctcctcctctttct 704
           |||||||||||||||||||||
Sbjct: 539 ccacttgctcctcctctttct 519
to top
>gb|AC022272.6| Homo sapiens BAC clone RP11-563E2 from 4, complete sequence
          Length = 186535

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 415   cctttattaagtgttattctt 435
             |||||||||||||||||||||
Sbjct: 67963 cctttattaagtgttattctt 67983
to top
>emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in linkage group 25,
              complete sequence
          Length = 236784

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    taaacaaacatgttgacaaac 127
              |||||||||||||||||||||
Sbjct: 229544 taaacaaacatgttgacaaac 229524
to top
>emb|AL954327.12| Zebrafish DNA sequence from clone DKEY-18H14 in linkage group 16,
              complete sequence
          Length = 237124

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 215    agaaataccaataattaagccaatcaaat 243
              ||||||| |||||||||||||||| ||||
Sbjct: 199612 agaaatatcaataattaagccaataaaat 199584
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>emb|AL929038.13| Zebrafish DNA sequence from clone DKEY-34D20 in linkage group 20,
             complete sequence
          Length = 213980

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 348   atatactgtagaatgatggat 368
             |||||||||||||||||||||
Sbjct: 59555 atatactgtagaatgatggat 59575
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>emb|AL929043.7| Mouse DNA sequence from clone RP23-58H6 on chromosome 2, complete
              sequence
          Length = 164834

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 446    tttgaaatgtttttcagcaag 466
              |||||||||||||||||||||
Sbjct: 128865 tttgaaatgtttttcagcaag 128885
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>dbj|AB014562.2| Homo sapiens mRNA for KIAA0662 protein, partial cds
          Length = 5253

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 684  ccacttgctcctcctctttct 704
            |||||||||||||||||||||
Sbjct: 3813 ccacttgctcctcctctttct 3793
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>gb|AC102469.7| Mus musculus chromosome 1, clone RP24-356O3, complete sequence
          Length = 173767

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    aaagaaataccaataattaa 232
              ||||||||||||||||||||
Sbjct: 165639 aaagaaataccaataattaa 165658
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>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 704     ttttgcttgccgccgctgct 723
               ||||||||||||||||||||
Sbjct: 1336219 ttttgcttgccgccgctgct 1336238
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>gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from chromosome unknown,
              complete sequence
          Length = 142253

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 529    ctgaatgactttcaaacacttgtt 552
              ||||||||| ||||||||||||||
Sbjct: 105780 ctgaatgacattcaaacacttgtt 105803
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>emb|CR376767.12| Zebrafish DNA sequence from clone DKEY-86A12 in linkage group 16,
              complete sequence
          Length = 167406

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 647    tttgattgtaatttttgttg 666
              ||||||||||||||||||||
Sbjct: 109930 tttgattgtaatttttgttg 109911
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>gb|AC124500.5| Mus musculus BAC clone RP24-69C19 from chromosome 6, complete sequence
          Length = 190224

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   ttacatgactttgaaatgtt 456
             ||||||||||||||||||||
Sbjct: 17892 ttacatgactttgaaatgtt 17873
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>ref|XM_650423.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (27.t00024)
            partial mRNA
          Length = 4329

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 417  tttattaagtgttattctta 436
            ||||||||||||||||||||
Sbjct: 1452 tttattaagtgttattctta 1471
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>emb|AL359175.10| Human DNA sequence from clone RP11-213K14 on chromosome 10 Contains part
              of a variant of the NEBL gene for the nebulette protein
              (actin-binding Z-disc protein) and an eukaryotic
              translation initiation factor 4B (EIF4B)(EIF-4B)
              pseudogene, complete sequence
          Length = 155290

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     ttgaattacatctgtgcttg 64
              ||||||||||||||||||||
Sbjct: 107762 ttgaattacatctgtgcttg 107781
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>emb|AL356278.8| Human DNA sequence from clone RP11-515J24 on chromosome 6, complete
              sequence
          Length = 182510

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 646    ctttgattgtaatttttgttgata 669
              ||||||||||||||| ||||||||
Sbjct: 109420 ctttgattgtaatttatgttgata 109443
to top
>gb|AC162861.2| Mus musculus chromosome 1, clone RP23-236B21, complete sequence
          Length = 151717

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    aaagaaataccaataattaa 232
              ||||||||||||||||||||
Sbjct: 118782 aaagaaataccaataattaa 118763
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>ref|XM_782926.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC582998 (LOC582998), mRNA
          Length = 828

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 519 attgtagtgactgaatgact 538
           ||||||||||||||||||||
Sbjct: 228 attgtagtgactgaatgact 209
to top
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence
          Length = 992211

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     ttcacttattttgttgaatt 51
              ||||||||||||||||||||
Sbjct: 568502 ttcacttattttgttgaatt 568521
to top
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 573    agaggcaggcctggatgtcg 592
              ||||||||||||||||||||
Sbjct: 177336 agaggcaggcctggatgtcg 177355
to top
>emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014F04,
              complete sequence
          Length = 173903

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 60     gcttgagcataagaactaccaggt 83
              |||||||||||||||| |||||||
Sbjct: 110839 gcttgagcataagaacgaccaggt 110816
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>emb|AJ543432.1|CGI543432 Crassostrea gigas Tld gene for Tolloid-like protein, exons 1-18
          Length = 9894

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 345  cacatatactgtagaatgat 364
            ||||||||||||||||||||
Sbjct: 3316 cacatatactgtagaatgat 3297
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>gb|AC149518.2| Xenopus tropicalis clone CH216-59A18, complete sequence
          Length = 210140

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     ggtattggcaatatcagtat 100
              ||||||||||||||||||||
Sbjct: 147773 ggtattggcaatatcagtat 147754
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>emb|BX950205.10| Zebrafish DNA sequence from clone CH211-226H8 in linkage group 22,
              complete sequence
          Length = 198379

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 647    tttgattgtaatttttgttg 666
              ||||||||||||||||||||
Sbjct: 116316 tttgattgtaatttttgttg 116335
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>gb|AF410153.1| Swinepox virus isolate 17077-99, complete genome
          Length = 146454

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 555   aatcgaagaggttcttggagaggc 578
             ||||||| ||||||||||||||||
Sbjct: 54739 aatcgaacaggttcttggagaggc 54716
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>gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer Institute Chimpanzee BAC
             Library) complete sequence
          Length = 148984

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 398   aagcaaacctaaaattacctttat 421
             ||||||||| ||||||||||||||
Sbjct: 14700 aagcaaaccaaaaattacctttat 14677
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>emb|BX321915.3| Zebrafish DNA sequence from clone CH211-250C19 in linkage group 9,
             complete sequence
          Length = 123689

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   agtaggaaaaagaaatacca 224
             ||||||||||||||||||||
Sbjct: 64941 agtaggaaaaagaaatacca 64922



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   agtaggaaaaagaaatacca 224
             ||||||||||||||||||||
Sbjct: 64437 agtaggaaaaagaaatacca 64456
to top
>emb|BX294102.9| Zebrafish DNA sequence from clone DKEY-257H21 in linkage group 19,
             complete sequence
          Length = 90082

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 647   tttgattgtaatttttgttg 666
             ||||||||||||||||||||
Sbjct: 52711 tttgattgtaatttttgttg 52730
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 60      gcttgagcataagaactaccaggt 83
               |||||||||||||||| |||||||
Sbjct: 6832333 gcttgagcataagaacgaccaggt 6832310
to top
>gb|AC013441.9| Homo sapiens BAC clone RP11-310E6 from 2, complete sequence
          Length = 182507

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 398   aagcaaacctaaaattacctttat 421
             ||||||||| ||||||||||||||
Sbjct: 82670 aagcaaaccaaaaattacctttat 82647
to top
>emb|BX855590.3| Zebrafish DNA sequence from clone CH211-245N8, complete sequence
          Length = 179373

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 647   tttgattgtaatttttgttg 666
             ||||||||||||||||||||
Sbjct: 82760 tttgattgtaatttttgttg 82779



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 647   tttgattgtaatttttgttg 666
             ||||||||||||||||||||
Sbjct: 21831 tttgattgtaatttttgttg 21812
to top
>emb|BX005383.8| Zebrafish DNA sequence from clone DKEYP-19E1 in linkage group 25,
              complete sequence
          Length = 142728

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 647    tttgattgtaatttttgttg 666
              ||||||||||||||||||||
Sbjct: 107824 tttgattgtaatttttgttg 107805
to top
>emb|BX248122.10| Zebrafish DNA sequence from clone CH211-214C20 in linkage group 4,
              complete sequence
          Length = 216208

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 647    tttgattgtaatttttgttg 666
              ||||||||||||||||||||
Sbjct: 148573 tttgattgtaatttttgttg 148554
to top
>dbj|AK068428.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155D07, full
           insert sequence
          Length = 3085

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 60  gcttgagcataagaactaccaggt 83
           |||||||||||||||| |||||||
Sbjct: 749 gcttgagcataagaacgaccaggt 726
to top
>emb|AL445383.5|CNS07ECZ Human chromosome 14 DNA sequence BAC R-88E18 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172914

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  aatgactttcaaacacttgt 551
            ||||||||||||||||||||
Sbjct: 6482 aatgactttcaaacacttgt 6463
to top
>emb|BX908764.11| Zebrafish DNA sequence from clone DKEY-262O11 in linkage group 22,
             complete sequence
          Length = 130230

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 647   tttgattgtaatttttgttg 666
             ||||||||||||||||||||
Sbjct: 55373 tttgattgtaatttttgttg 55392
to top
>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete
             sequence
          Length = 140069

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 60    gcttgagcataagaactaccaggt 83
             |||||||||||||||| |||||||
Sbjct: 11090 gcttgagcataagaacgaccaggt 11067
to top
>emb|Z81125.1|CET22A3 Caenorhabditis elegans Cosmid T22A3, complete sequence
          Length = 36051

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 643   cctctttgattgtaattttt 662
             ||||||||||||||||||||
Sbjct: 18574 cctctttgattgtaattttt 18555
to top
>emb|CR318629.4| Zebrafish DNA sequence from clone DKEY-30I24 in linkage group 23,
             complete sequence
          Length = 89377

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 647   tttgattgtaatttttgttg 666
             ||||||||||||||||||||
Sbjct: 14952 tttgattgtaatttttgttg 14933
to top
>emb|BX004853.7| Zebrafish DNA sequence from clone DKEY-13O11, complete sequence
          Length = 182526

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 647    tttgattgtaatttttgttg 666
              ||||||||||||||||||||
Sbjct: 147666 tttgattgtaatttttgttg 147685
to top
>gb|AC139322.4| Mus musculus BAC clone RP24-397L22 from 9, complete sequence
          Length = 186567

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 685   cacttgctcctcctctttct 704
             ||||||||||||||||||||
Sbjct: 93883 cacttgctcctcctctttct 93902
to top
>emb|BX001051.29| Zebrafish DNA sequence from clone DKEYP-68F9 in linkage group 9,
             complete sequence
          Length = 213486

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   agtaggaaaaagaaatacca 224
             ||||||||||||||||||||
Sbjct: 66927 agtaggaaaaagaaatacca 66908



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   agtaggaaaaagaaatacca 224
             ||||||||||||||||||||
Sbjct: 66423 agtaggaaaaagaaatacca 66442
to top
>emb|CR962128.2| Medicago truncatula chromosome 5 clone mth2-2o11, COMPLETE SEQUENCE
          Length = 136557

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 370   agagaaactgatatcctgataaat 393
             ||||||||||||||||| ||||||
Sbjct: 50990 agagaaactgatatcctaataaat 50967
to top
>emb|AJ627422.1| Uncultured crenarchaeote genomic fragment 54d9
          Length = 43377

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   taagtgttattcttattaca 441
             ||||||||||||||||||||
Sbjct: 27794 taagtgttattcttattaca 27775
to top
>emb|AL669845.9| Mouse DNA sequence from clone RP23-43C21 on chromosome 11, complete
              sequence
          Length = 243954

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    tgacttcctctcatcatatc 274
              ||||||||||||||||||||
Sbjct: 149190 tgacttcctctcatcatatc 149209
to top
>emb|AL390097.2|CNS06C7L Human chromosome 14 DNA sequence BAC C-2278M12 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 92590

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 532   aatgactttcaaacacttgt 551
             ||||||||||||||||||||
Sbjct: 72096 aatgactttcaaacacttgt 72077


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,423,787
Number of Sequences: 3902068
Number of extensions: 8423787
Number of successful extensions: 174767
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 174373
Number of HSP's gapped (non-prelim): 394
length of query: 726
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 703
effective length of database: 17,143,297,704
effective search space: 12051738285912
effective search space used: 12051738285912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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