ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags13l01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472724.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 582 Score = 329 bits (166), Expect = 7e-87 Identities = 304/350 (86%) Strand = Plus / Minus Query: 324 gcagttgtcgacggtggcgtagaggcggtagggcgaggcgtcggtggcgagccactgctc 383 ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 522 gcagttgtcgacgacggcgtagaggcggtagggcgatgcgtcggtggcgagccactgctc 463 Query: 384 gaccgtgaagagctgctgcgcgcagcccatgtggggccccgtggccgtgacctcgacgta 443 ||| ||||||||||||||||||||||| | |||||| |||||| | ||| |||||| ||| Sbjct: 462 gacggtgaagagctgctgcgcgcagccgaggtggggacccgtgacggtggcctcgaggta 403 Query: 444 gttgcagtaccagccgtggtgcgcgccggcaccgtcggatgtgacgttcgcccagcacgg 503 ||||||||||||||||||||||| ||||| |||||||| |||| |||| || |||||| Sbjct: 402 gttgcagtaccagccgtggtgcgggccggtgccgtcggaggtgaggttcatccggcacgg 343 Query: 504 cgcgtgctccatgcacggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaata 563 ||| || |||||| || ||||| |||||||||||||||||||||||||||||||| || Sbjct: 342 cgcctggcgcatgcaggggccgcggccgctgaagatgtcgaggttgccgcgctcgtagta 283 Query: 564 gtcgtggccggcgcccatcatgccgccccatttcgccaggtcaccgatccggatgccctt 623 |||||||||| ||||||| | ||||||||| | ||||||| | |||||| | || Sbjct: 282 gtcgtggccgtcgcccatgaggccgccccaccgctccaggtcgcggatccgcaccccgga 223 Query: 624 gccgtccgagcccagcagcgtcacaccgatcgccgagtccgtcccgccct 673 |||||| | ||||||||||||||| |||||| |||||||||||||||||| Sbjct: 222 gccgtcggcgcccagcagcgtcacgccgatcaccgagtccgtcccgccct 173
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15, complete sequence Length = 143109 Score = 329 bits (166), Expect = 7e-87 Identities = 304/350 (86%) Strand = Plus / Minus Query: 324 gcagttgtcgacggtggcgtagaggcggtagggcgaggcgtcggtggcgagccactgctc 383 ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141873 gcagttgtcgacgacggcgtagaggcggtagggcgatgcgtcggtggcgagccactgctc 141814 Query: 384 gaccgtgaagagctgctgcgcgcagcccatgtggggccccgtggccgtgacctcgacgta 443 ||| ||||||||||||||||||||||| | |||||| |||||| | ||| |||||| ||| Sbjct: 141813 gacggtgaagagctgctgcgcgcagccgaggtggggacccgtgacggtggcctcgaggta 141754 Query: 444 gttgcagtaccagccgtggtgcgcgccggcaccgtcggatgtgacgttcgcccagcacgg 503 ||||||||||||||||||||||| ||||| |||||||| |||| |||| || |||||| Sbjct: 141753 gttgcagtaccagccgtggtgcgggccggtgccgtcggaggtgaggttcatccggcacgg 141694 Query: 504 cgcgtgctccatgcacggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaata 563 ||| || |||||| || ||||| |||||||||||||||||||||||||||||||| || Sbjct: 141693 cgcctggcgcatgcaggggccgcggccgctgaagatgtcgaggttgccgcgctcgtagta 141634 Query: 564 gtcgtggccggcgcccatcatgccgccccatttcgccaggtcaccgatccggatgccctt 623 |||||||||| ||||||| | ||||||||| | ||||||| | |||||| | || Sbjct: 141633 gtcgtggccgtcgcccatgaggccgccccaccgctccaggtcgcggatccgcaccccgga 141574 Query: 624 gccgtccgagcccagcagcgtcacaccgatcgccgagtccgtcccgccct 673 |||||| | ||||||||||||||| |||||| |||||||||||||||||| Sbjct: 141573 gccgtcggcgcccagcagcgtcacgccgatcaccgagtccgtcccgccct 141524 Score = 127 bits (64), Expect = 5e-26 Identities = 142/168 (84%) Strand = Plus / Minus Query: 414 gtggggccccgtggccgtgacctcgacgtagttgcagtaccagccgtggtgcgcgccggc 473 |||||| |||||||| |||||||| ||| | ||||||||||| ||||||||||||||||| Sbjct: 134647 gtgggggcccgtggcggtgacctccacggacttgcagtaccacccgtggtgcgcgccggc 134588 Query: 474 accgtcggatgtgacgttcgcccagcacggcgcgtgctccatgcacggcccgcgaccgct 533 |||||||| || | |||| || |||||||| | | || ||||||| |||| ||||| Sbjct: 134587 gccgtcggaggtcaggttcatccggcacggcggggacggcaggcacggcgcgcgcccgct 134528 Query: 534 gaagatgtcgaggttgccgcgctcgtaatagtcgtggccggcgcccat 581 ||| | ||||| ||||||||||||||| |||||||| ||||||||||| Sbjct: 134527 gaacacgtcgacgttgccgcgctcgtagtagtcgtgcccggcgcccat 134480 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 520 ggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaatagtcgtggccggcgccc 579 |||||||| |||||||||||||||| ||||| |||||| | |||||||||||||| || Sbjct: 133324 ggcccgcggccgctgaagatgtcgacgttgctccgctcgaagtagtcgtggccggccgcc 133265 Query: 580 atcatgccgcccca 593 || | ||||||||| Sbjct: 133264 atgaggccgcccca 133251 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 339 ggcgtagaggcggtagggcgaggcgtcggtggcgagccactgctcgac 386 ||||||||| |||| |||| |||||||||||||||||||||||||| Sbjct: 134722 ggcgtagagctggtaaggcggcgcgtcggtggcgagccactgctcgac 134675 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 430 gtgacctcgacgtagttgcagtaccagccgtggtgcgcgccggcaccgt 478 |||||||||||| | |||||| |||| ||||||||| ||||||| |||| Sbjct: 133414 gtgacctcgacggacttgcagaaccacccgtggtgctcgccggcgccgt 133366 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 339 ggcgtagaggcggtagggcgaggcgtcggtggcgagccactgct 382 ||||||||| |||| |||| |||||||||||||||||||||| Sbjct: 133505 ggcgtagagctggtacggcggcgcgtcggtggcgagccactgct 133462
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 329 bits (166), Expect = 7e-87 Identities = 304/350 (86%) Strand = Plus / Minus Query: 324 gcagttgtcgacggtggcgtagaggcggtagggcgaggcgtcggtggcgagccactgctc 383 ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 13452 gcagttgtcgacgacggcgtagaggcggtagggcgatgcgtcggtggcgagccactgctc 13393 Query: 384 gaccgtgaagagctgctgcgcgcagcccatgtggggccccgtggccgtgacctcgacgta 443 ||| ||||||||||||||||||||||| | |||||| |||||| | ||| |||||| ||| Sbjct: 13392 gacggtgaagagctgctgcgcgcagccgaggtggggacccgtgacggtggcctcgaggta 13333 Query: 444 gttgcagtaccagccgtggtgcgcgccggcaccgtcggatgtgacgttcgcccagcacgg 503 ||||||||||||||||||||||| ||||| |||||||| |||| |||| || |||||| Sbjct: 13332 gttgcagtaccagccgtggtgcgggccggtgccgtcggaggtgaggttcatccggcacgg 13273 Query: 504 cgcgtgctccatgcacggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaata 563 ||| || |||||| || ||||| |||||||||||||||||||||||||||||||| || Sbjct: 13272 cgcctggcgcatgcaggggccgcggccgctgaagatgtcgaggttgccgcgctcgtagta 13213 Query: 564 gtcgtggccggcgcccatcatgccgccccatttcgccaggtcaccgatccggatgccctt 623 |||||||||| ||||||| | ||||||||| | ||||||| | |||||| | || Sbjct: 13212 gtcgtggccgtcgcccatgaggccgccccaccgctccaggtcgcggatccgcaccccgga 13153 Query: 624 gccgtccgagcccagcagcgtcacaccgatcgccgagtccgtcccgccct 673 |||||| | ||||||||||||||| |||||| |||||||||||||||||| Sbjct: 13152 gccgtcggcgcccagcagcgtcacgccgatcaccgagtccgtcccgccct 13103 Score = 127 bits (64), Expect = 5e-26 Identities = 142/168 (84%) Strand = Plus / Minus Query: 414 gtggggccccgtggccgtgacctcgacgtagttgcagtaccagccgtggtgcgcgccggc 473 |||||| |||||||| |||||||| ||| | ||||||||||| ||||||||||||||||| Sbjct: 6226 gtgggggcccgtggcggtgacctccacggacttgcagtaccacccgtggtgcgcgccggc 6167 Query: 474 accgtcggatgtgacgttcgcccagcacggcgcgtgctccatgcacggcccgcgaccgct 533 |||||||| || | |||| || |||||||| | | || ||||||| |||| ||||| Sbjct: 6166 gccgtcggaggtcaggttcatccggcacggcggggacggcaggcacggcgcgcgcccgct 6107 Query: 534 gaagatgtcgaggttgccgcgctcgtaatagtcgtggccggcgcccat 581 ||| | ||||| ||||||||||||||| |||||||| ||||||||||| Sbjct: 6106 gaacacgtcgacgttgccgcgctcgtagtagtcgtgcccggcgcccat 6059 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 520 ggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaatagtcgtggccggcgccc 579 |||||||| |||||||||||||||| ||||| |||||| | |||||||||||||| || Sbjct: 4903 ggcccgcggccgctgaagatgtcgacgttgctccgctcgaagtagtcgtggccggccgcc 4844 Query: 580 atcatgccgcccca 593 || | ||||||||| Sbjct: 4843 atgaggccgcccca 4830 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 339 ggcgtagaggcggtagggcgaggcgtcggtggcgagccactgctcgac 386 ||||||||| |||| |||| |||||||||||||||||||||||||| Sbjct: 6301 ggcgtagagctggtaaggcggcgcgtcggtggcgagccactgctcgac 6254 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 430 gtgacctcgacgtagttgcagtaccagccgtggtgcgcgccggcaccgt 478 |||||||||||| | |||||| |||| ||||||||| ||||||| |||| Sbjct: 4993 gtgacctcgacggacttgcagaaccacccgtggtgctcgccggcgccgt 4945 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 339 ggcgtagaggcggtagggcgaggcgtcggtggcgagccactgct 382 ||||||||| |||| |||| |||||||||||||||||||||| Sbjct: 5084 ggcgtagagctggtacggcggcgcgtcggtggcgagccactgct 5041
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 329 bits (166), Expect = 7e-87 Identities = 304/350 (86%) Strand = Plus / Minus Query: 324 gcagttgtcgacggtggcgtagaggcggtagggcgaggcgtcggtggcgagccactgctc 383 ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 22804677 gcagttgtcgacgacggcgtagaggcggtagggcgatgcgtcggtggcgagccactgctc 22804618 Query: 384 gaccgtgaagagctgctgcgcgcagcccatgtggggccccgtggccgtgacctcgacgta 443 ||| ||||||||||||||||||||||| | |||||| |||||| | ||| |||||| ||| Sbjct: 22804617 gacggtgaagagctgctgcgcgcagccgaggtggggacccgtgacggtggcctcgaggta 22804558 Query: 444 gttgcagtaccagccgtggtgcgcgccggcaccgtcggatgtgacgttcgcccagcacgg 503 ||||||||||||||||||||||| ||||| |||||||| |||| |||| || |||||| Sbjct: 22804557 gttgcagtaccagccgtggtgcgggccggtgccgtcggaggtgaggttcatccggcacgg 22804498 Query: 504 cgcgtgctccatgcacggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaata 563 ||| || |||||| || ||||| |||||||||||||||||||||||||||||||| || Sbjct: 22804497 cgcctggcgcatgcaggggccgcggccgctgaagatgtcgaggttgccgcgctcgtagta 22804438 Query: 564 gtcgtggccggcgcccatcatgccgccccatttcgccaggtcaccgatccggatgccctt 623 |||||||||| ||||||| | ||||||||| | ||||||| | |||||| | || Sbjct: 22804437 gtcgtggccgtcgcccatgaggccgccccaccgctccaggtcgcggatccgcaccccgga 22804378 Query: 624 gccgtccgagcccagcagcgtcacaccgatcgccgagtccgtcccgccct 673 |||||| | ||||||||||||||| |||||| |||||||||||||||||| Sbjct: 22804377 gccgtcggcgcccagcagcgtcacgccgatcaccgagtccgtcccgccct 22804328 Score = 127 bits (64), Expect = 5e-26 Identities = 142/168 (84%) Strand = Plus / Minus Query: 414 gtggggccccgtggccgtgacctcgacgtagttgcagtaccagccgtggtgcgcgccggc 473 |||||| |||||||| |||||||| ||| | ||||||||||| ||||||||||||||||| Sbjct: 22797451 gtgggggcccgtggcggtgacctccacggacttgcagtaccacccgtggtgcgcgccggc 22797392 Query: 474 accgtcggatgtgacgttcgcccagcacggcgcgtgctccatgcacggcccgcgaccgct 533 |||||||| || | |||| || |||||||| | | || ||||||| |||| ||||| Sbjct: 22797391 gccgtcggaggtcaggttcatccggcacggcggggacggcaggcacggcgcgcgcccgct 22797332 Query: 534 gaagatgtcgaggttgccgcgctcgtaatagtcgtggccggcgcccat 581 ||| | ||||| ||||||||||||||| |||||||| ||||||||||| Sbjct: 22797331 gaacacgtcgacgttgccgcgctcgtagtagtcgtgcccggcgcccat 22797284 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 520 ggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaatagtcgtggccggcgccc 579 |||||||| |||||||||||||||| ||||| |||||| | |||||||||||||| || Sbjct: 22796128 ggcccgcggccgctgaagatgtcgacgttgctccgctcgaagtagtcgtggccggccgcc 22796069 Query: 580 atcatgccgcccca 593 || | ||||||||| Sbjct: 22796068 atgaggccgcccca 22796055 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 339 ggcgtagaggcggtagggcgaggcgtcggtggcgagccactgctcgac 386 ||||||||| |||| |||| |||||||||||||||||||||||||| Sbjct: 22797526 ggcgtagagctggtaaggcggcgcgtcggtggcgagccactgctcgac 22797479 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 430 gtgacctcgacgtagttgcagtaccagccgtggtgcgcgccggcaccgt 478 |||||||||||| | |||||| |||| ||||||||| ||||||| |||| Sbjct: 22796218 gtgacctcgacggacttgcagaaccacccgtggtgctcgccggcgccgt 22796170 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 339 ggcgtagaggcggtagggcgaggcgtcggtggcgagccactgct 382 ||||||||| |||| |||| |||||||||||||||||||||| Sbjct: 22796309 ggcgtagagctggtacggcggcgcgtcggtggcgagccactgct 22796266
>dbj|AK065178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D12, full insert sequence Length = 895 Score = 329 bits (166), Expect = 7e-87 Identities = 304/350 (86%) Strand = Plus / Minus Query: 324 gcagttgtcgacggtggcgtagaggcggtagggcgaggcgtcggtggcgagccactgctc 383 ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 620 gcagttgtcgacgacggcgtagaggcggtagggcgatgcgtcggtggcgagccactgctc 561 Query: 384 gaccgtgaagagctgctgcgcgcagcccatgtggggccccgtggccgtgacctcgacgta 443 ||| ||||||||||||||||||||||| | |||||| |||||| | ||| |||||| ||| Sbjct: 560 gacggtgaagagctgctgcgcgcagccgaggtggggacccgtgacggtggcctcgaggta 501 Query: 444 gttgcagtaccagccgtggtgcgcgccggcaccgtcggatgtgacgttcgcccagcacgg 503 ||||||||||||||||||||||| ||||| |||||||| |||| |||| || |||||| Sbjct: 500 gttgcagtaccagccgtggtgcgggccggtgccgtcggaggtgaggttcatccggcacgg 441 Query: 504 cgcgtgctccatgcacggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaata 563 ||| || |||||| || ||||| |||||||||||||||||||||||||||||||| || Sbjct: 440 cgcctggcgcatgcaggggccgcggccgctgaagatgtcgaggttgccgcgctcgtagta 381 Query: 564 gtcgtggccggcgcccatcatgccgccccatttcgccaggtcaccgatccggatgccctt 623 |||||||||| ||||||| | ||||||||| | ||||||| | |||||| | || Sbjct: 380 gtcgtggccgtcgcccatgaggccgccccaccgctccaggtcgcggatccgcaccccgga 321 Query: 624 gccgtccgagcccagcagcgtcacaccgatcgccgagtccgtcccgccct 673 |||||| | ||||||||||||||| |||||| |||||||||||||||||| Sbjct: 320 gccgtcggcgcccagcagcgtcacgccgatcaccgagtccgtcccgccct 271
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 192 bits (97), Expect = 1e-45 Identities = 208/245 (84%) Strand = Plus / Plus Query: 349 cggtagggcgaggcgtcggtggcgagccactgctcgaccgtgaagagctgctgcgcgcag 408 ||||| |||||||||||||||||||||||||||||||| ||| || |||||||||| Sbjct: 6264820 cggtacggcgaggcgtcggtggcgagccactgctcgacgtcgaaccgccgctgcgcgcac 6264879 Query: 409 cccatgtggggccccgtggccgtgacctcgacgtagttgcagtaccagccgtggtgcgcg 468 || ||| || || |||||||| ||||||||||||||||||||||| |||||||| ||| Sbjct: 6264880 ccgcggtgcgggccggtggccgtcacctcgacgtagttgcagtaccacccgtggtgggcg 6264939 Query: 469 ccggcaccgtcggatgtgacgttcgcccagcacggcgcgtgctccatgcacggcccgcga 528 ||||| |||||||| |||| |||| |||||||||||| | | |||||| ||||| Sbjct: 6264940 ccggcgccgtcggaggtgaggttcatccagcacggcgccgccgggaggcacgggccgcgg 6264999 Query: 529 ccgctgaagatgtcgaggttgccgcgctcgtaatagtcgtggccggcgcccatcatgccg 588 |||||||| | ||| |||||||| |||||||| |||||||||||||||||||||| |||| Sbjct: 6265000 ccgctgaacacgtccaggttgccccgctcgtagtagtcgtggccggcgcccatcaggccg 6265059 Query: 589 cccca 593 ||||| Sbjct: 6265060 cccca 6265064
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 192 bits (97), Expect = 1e-45 Identities = 208/245 (84%) Strand = Plus / Plus Query: 349 cggtagggcgaggcgtcggtggcgagccactgctcgaccgtgaagagctgctgcgcgcag 408 ||||| |||||||||||||||||||||||||||||||| ||| || |||||||||| Sbjct: 58896 cggtacggcgaggcgtcggtggcgagccactgctcgacgtcgaaccgccgctgcgcgcac 58955 Query: 409 cccatgtggggccccgtggccgtgacctcgacgtagttgcagtaccagccgtggtgcgcg 468 || ||| || || |||||||| ||||||||||||||||||||||| |||||||| ||| Sbjct: 58956 ccgcggtgcgggccggtggccgtcacctcgacgtagttgcagtaccacccgtggtgggcg 59015 Query: 469 ccggcaccgtcggatgtgacgttcgcccagcacggcgcgtgctccatgcacggcccgcga 528 ||||| |||||||| |||| |||| |||||||||||| | | |||||| ||||| Sbjct: 59016 ccggcgccgtcggaggtgaggttcatccagcacggcgccgccgggaggcacgggccgcgg 59075 Query: 529 ccgctgaagatgtcgaggttgccgcgctcgtaatagtcgtggccggcgcccatcatgccg 588 |||||||| | ||| |||||||| |||||||| |||||||||||||||||||||| |||| Sbjct: 59076 ccgctgaacacgtccaggttgccccgctcgtagtagtcgtggccggcgcccatcaggccg 59135 Query: 589 cccca 593 ||||| Sbjct: 59136 cccca 59140
>dbj|AK108233.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-G05, full insert sequence Length = 788 Score = 192 bits (97), Expect = 1e-45 Identities = 208/245 (84%) Strand = Plus / Minus Query: 349 cggtagggcgaggcgtcggtggcgagccactgctcgaccgtgaagagctgctgcgcgcag 408 ||||| |||||||||||||||||||||||||||||||| ||| || |||||||||| Sbjct: 492 cggtacggcgaggcgtcggtggcgagccactgctcgacgtcgaaccgccgctgcgcgcac 433 Query: 409 cccatgtggggccccgtggccgtgacctcgacgtagttgcagtaccagccgtggtgcgcg 468 || ||| || || |||||||| ||||||||||||||||||||||| |||||||| ||| Sbjct: 432 ccgccgtgcgggccggtggccgtcacctcgacgtagttgcagtaccacccgtggtgggcg 373 Query: 469 ccggcaccgtcggatgtgacgttcgcccagcacggcgcgtgctccatgcacggcccgcga 528 ||||| |||||||| |||| |||| |||||||||||| | | |||||| ||||| Sbjct: 372 ccggcgccgtcggaggtgaggttcatccagcacggcgccgccgggaggcacgggccgcgg 313 Query: 529 ccgctgaagatgtcgaggttgccgcgctcgtaatagtcgtggccggcgcccatcatgccg 588 |||||||| | ||| |||||||| |||||||| |||||||||||||||||||||| |||| Sbjct: 312 ccgctgaacacgtccaggttgccccgctcgtagtagtcgtggccggcgcccatcaggccg 253 Query: 589 cccca 593 ||||| Sbjct: 252 cccca 248
>ref|XM_467841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 143 bits (72), Expect = 9e-31 Identities = 117/132 (88%) Strand = Plus / Minus Query: 351 gtagggcgaggcgtcggtggcgagccactgctcgaccgtgaagagctgctgcgcgcagcc 410 |||||||| |||||||||||| |||||||||||||| ||||| |||||||||||||| || Sbjct: 587 gtagggcgcggcgtcggtggccagccactgctcgacggtgaacagctgctgcgcgcaccc 528 Query: 411 catgtggggccccgtggccgtgacctcgacgtagttgcagtaccagccgtggtgcgcgcc 470 | |||| | |||||| | |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 527 cttgtgcgcgcccgtgacggtgacctcgacgtagttgcagtaccatccgtggtgcgggcc 468 Query: 471 ggcaccgtcgga 482 || |||||||| Sbjct: 467 ggtgccgtcgga 456 Score = 83.8 bits (42), Expect = 7e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 512 ccatgcacggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaatagtcgtggc 571 |||||||||| ||||| |||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 426 ccatgcacgggccgcggccgctgaagatgtcgaggttgccgcgctcgaagtaggagtggc 367 Query: 572 cggcgcccatcatgccgcccca 593 | | ||||||| ||||||||| Sbjct: 366 cctcccccatcaggccgcccca 345
>ref|XM_506976.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1288_G09.19 mRNA Length = 898 Score = 143 bits (72), Expect = 9e-31 Identities = 117/132 (88%) Strand = Plus / Minus Query: 351 gtagggcgaggcgtcggtggcgagccactgctcgaccgtgaagagctgctgcgcgcagcc 410 |||||||| |||||||||||| |||||||||||||| ||||| |||||||||||||| || Sbjct: 592 gtagggcgcggcgtcggtggccagccactgctcgacggtgaacagctgctgcgcgcaccc 533 Query: 411 catgtggggccccgtggccgtgacctcgacgtagttgcagtaccagccgtggtgcgcgcc 470 | |||| | |||||| | |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 532 cttgtgcgcgcccgtgacggtgacctcgacgtagttgcagtaccatccgtggtgcgggcc 473 Query: 471 ggcaccgtcgga 482 || |||||||| Sbjct: 472 ggtgccgtcgga 461 Score = 83.8 bits (42), Expect = 7e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 512 ccatgcacggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaatagtcgtggc 571 |||||||||| ||||| |||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 431 ccatgcacgggccgcggccgctgaagatgtcgaggttgccgcgctcgaagtaggagtggc 372 Query: 572 cggcgcccatcatgccgcccca 593 | | ||||||| ||||||||| Sbjct: 371 cctcccccatcaggccgcccca 350
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 143 bits (72), Expect = 9e-31 Identities = 117/132 (88%) Strand = Plus / Minus Query: 351 gtagggcgaggcgtcggtggcgagccactgctcgaccgtgaagagctgctgcgcgcagcc 410 |||||||| |||||||||||| |||||||||||||| ||||| |||||||||||||| || Sbjct: 31695623 gtagggcgcggcgtcggtggccagccactgctcgacggtgaacagctgctgcgcgcaccc 31695564 Query: 411 catgtggggccccgtggccgtgacctcgacgtagttgcagtaccagccgtggtgcgcgcc 470 | |||| | |||||| | |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 31695563 cttgtgcgcgcccgtgacggtgacctcgacgtagttgcagtaccatccgtggtgcgggcc 31695504 Query: 471 ggcaccgtcgga 482 || |||||||| Sbjct: 31695503 ggtgccgtcgga 31695492 Score = 83.8 bits (42), Expect = 7e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 512 ccatgcacggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaatagtcgtggc 571 |||||||||| ||||| |||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 31695462 ccatgcacgggccgcggccgctgaagatgtcgaggttgccgcgctcgaagtaggagtggc 31695403 Query: 572 cggcgcccatcatgccgcccca 593 | | ||||||| ||||||||| Sbjct: 31695402 cctcccccatcaggccgcccca 31695381
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 143 bits (72), Expect = 9e-31 Identities = 117/132 (88%) Strand = Plus / Minus Query: 351 gtagggcgaggcgtcggtggcgagccactgctcgaccgtgaagagctgctgcgcgcagcc 410 |||||||| |||||||||||| |||||||||||||| ||||| |||||||||||||| || Sbjct: 75410 gtagggcgcggcgtcggtggccagccactgctcgacggtgaacagctgctgcgcgcaccc 75351 Query: 411 catgtggggccccgtggccgtgacctcgacgtagttgcagtaccagccgtggtgcgcgcc 470 | |||| | |||||| | |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 75350 cttgtgcgcgcccgtgacggtgacctcgacgtagttgcagtaccatccgtggtgcgggcc 75291 Query: 471 ggcaccgtcgga 482 || |||||||| Sbjct: 75290 ggtgccgtcgga 75279 Score = 83.8 bits (42), Expect = 7e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 512 ccatgcacggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaatagtcgtggc 571 |||||||||| ||||| |||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 75249 ccatgcacgggccgcggccgctgaagatgtcgaggttgccgcgctcgaagtaggagtggc 75190 Query: 572 cggcgcccatcatgccgcccca 593 | | ||||||| ||||||||| Sbjct: 75189 cctcccccatcaggccgcccca 75168
>dbj|AK104930.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F02, full insert sequence Length = 801 Score = 143 bits (72), Expect = 9e-31 Identities = 117/132 (88%) Strand = Plus / Minus Query: 351 gtagggcgaggcgtcggtggcgagccactgctcgaccgtgaagagctgctgcgcgcagcc 410 |||||||| |||||||||||| |||||||||||||| ||||| |||||||||||||| || Sbjct: 587 gtagggcgcggcgtcggtggccagccactgctcgacggtgaacagctgctgcgcgcaccc 528 Query: 411 catgtggggccccgtggccgtgacctcgacgtagttgcagtaccagccgtggtgcgcgcc 470 | |||| | |||||| | |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 527 cttgtgcgcgcccgtgacggtgacctcgacgtagttgcagtaccatccgtggtgcgggcc 468 Query: 471 ggcaccgtcgga 482 || |||||||| Sbjct: 467 ggtgccgtcgga 456 Score = 83.8 bits (42), Expect = 7e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 512 ccatgcacggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaatagtcgtggc 571 |||||||||| ||||| |||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 426 ccatgcacgggccgcggccgctgaagatgtcgaggttgccgcgctcgaagtaggagtggc 367 Query: 572 cggcgcccatcatgccgcccca 593 | | ||||||| ||||||||| Sbjct: 366 cctcccccatcaggccgcccca 345
>dbj|AK065736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038J04, full insert sequence Length = 898 Score = 143 bits (72), Expect = 9e-31 Identities = 117/132 (88%) Strand = Plus / Minus Query: 351 gtagggcgaggcgtcggtggcgagccactgctcgaccgtgaagagctgctgcgcgcagcc 410 |||||||| |||||||||||| |||||||||||||| ||||| |||||||||||||| || Sbjct: 592 gtagggcgcggcgtcggtggccagccactgctcgacggtgaacagctgctgcgcgcaccc 533 Query: 411 catgtggggccccgtggccgtgacctcgacgtagttgcagtaccagccgtggtgcgcgcc 470 | |||| | |||||| | |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 532 cttgtgcgcgcccgtgacggtgacctcgacgtagttgcagtaccatccgtggtgcgggcc 473 Query: 471 ggcaccgtcgga 482 || |||||||| Sbjct: 472 ggtgccgtcgga 461 Score = 83.8 bits (42), Expect = 7e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 512 ccatgcacggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaatagtcgtggc 571 |||||||||| ||||| |||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 431 ccatgcacgggccgcggccgctgaagatgtcgaggttgccgcgctcgaagtaggagtggc 372 Query: 572 cggcgcccatcatgccgcccca 593 | | ||||||| ||||||||| Sbjct: 371 cctcccccatcaggccgcccca 350
>ref|XM_472723.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 573 Score = 127 bits (64), Expect = 5e-26 Identities = 142/168 (84%) Strand = Plus / Minus Query: 414 gtggggccccgtggccgtgacctcgacgtagttgcagtaccagccgtggtgcgcgccggc 473 |||||| |||||||| |||||||| ||| | ||||||||||| ||||||||||||||||| Sbjct: 447 gtgggggcccgtggcggtgacctccacggacttgcagtaccacccgtggtgcgcgccggc 388 Query: 474 accgtcggatgtgacgttcgcccagcacggcgcgtgctccatgcacggcccgcgaccgct 533 |||||||| || | |||| || |||||||| | | || ||||||| |||| ||||| Sbjct: 387 gccgtcggaggtcaggttcatccggcacggcggggacggcaggcacggcgcgcgcccgct 328 Query: 534 gaagatgtcgaggttgccgcgctcgtaatagtcgtggccggcgcccat 581 ||| | ||||| ||||||||||||||| |||||||| ||||||||||| Sbjct: 327 gaacacgtcgacgttgccgcgctcgtagtagtcgtgcccggcgcccat 280 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 339 ggcgtagaggcggtagggcgaggcgtcggtggcgagccactgctcgac 386 ||||||||| |||| |||| |||||||||||||||||||||||||| Sbjct: 522 ggcgtagagctggtaaggcggcgcgtcggtggcgagccactgctcgac 475
>gb|AY109817.1| Zea mays CL10832_1 mRNA sequence Length = 843 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 374 gccactgctcgaccgtgaagagctgctgcgcgcagcccatgtggggccccgtggccgtga 433 ||||||||||||| ||||| ||||||||| |||| ||| |||| || ||||||| |||| Sbjct: 382 gccactgctcgacggtgaacagctgctgcccgcaccccttgtgcgggcccgtggtggtga 441 Query: 434 cctcgacgtagttgcagtaccagccgtggtgcgcgccggcaccgtcgg 481 | || ||||||||||||||||| |||||||| |||||| ||||||| Sbjct: 442 cttccacgtagttgcagtaccacccgtggtggtcgccggtgccgtcgg 489 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 495 ccagcacggcgcgtgctccatgcacggcccgcgaccgctgaagatgtcgaggttgccgcg 554 |||||||||||| | | ||||||| |||||||| |||||||||||||| ||||||| ||| Sbjct: 503 ccagcacggcgccttcgccatgcagggcccgcggccgctgaagatgtccaggttgctgcg 562 Query: 555 ctcg 558 |||| Sbjct: 563 ctcg 566
>ref|XM_472722.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 555 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 520 ggcccgcgaccgctgaagatgtcgaggttgccgcgctcgtaatagtcgtggccggcgccc 579 |||||||| |||||||||||||||| ||||| |||||| | |||||||||||||| || Sbjct: 314 ggcccgcggccgctgaagatgtcgacgttgctccgctcgaagtagtcgtggccggccgcc 255 Query: 580 atcatgccgcccca 593 || | ||||||||| Sbjct: 254 atgaggccgcccca 241 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 430 gtgacctcgacgtagttgcagtaccagccgtggtgcgcgccggcaccgt 478 |||||||||||| | |||||| |||| ||||||||| ||||||| |||| Sbjct: 404 gtgacctcgacggacttgcagaaccacccgtggtgctcgccggcgccgt 356 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 339 ggcgtagaggcggtagggcgaggcgtcggtggcgagccactgct 382 ||||||||| |||| |||| |||||||||||||||||||||| Sbjct: 495 ggcgtagagctggtacggcggcgcgtcggtggcgagccactgct 452
>gb|AC137113.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0006N14, complete sequence Length = 155730 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 551 cgcgctcgtaatagtcgtggccggcgcccat 581 |||||||||| |||||||| ||||||||||| Sbjct: 28809 cgcgctcgtactagtcgtgcccggcgcccat 28839
>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0070D14, complete sequence Length = 174780 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 551 cgcgctcgtaatagtcgtggccggcgcccat 581 |||||||||| |||||||| ||||||||||| Sbjct: 166140 cgcgctcgtactagtcgtgcccggcgcccat 166170
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 551 cgcgctcgtaatagtcgtggccggcgcccat 581 |||||||||| |||||||| ||||||||||| Sbjct: 15173176 cgcgctcgtactagtcgtgcccggcgcccat 15173206
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 551 cgcgctcgtaatagtcgtggccggcgcccat 581 |||||||||| |||||||| ||||||||||| Sbjct: 15254675 cgcgctcgtactagtcgtgcccggcgcccat 15254705
>gb|AC099542.2| Homo sapiens chromosome 3 clone RP11-520D19, complete sequence Length = 178351 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 202 ttttacaacaacaataatatgt 223 |||||||||||||||||||||| Sbjct: 110074 ttttacaacaacaataatatgt 110095
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 287 ccctggcctcgtggcccttggccgcc 312 ||||| |||||||||||||||||||| Sbjct: 2011014 ccctgacctcgtggcccttggccgcc 2010989
>gb|AF314810.1|AF314810 Brassica napus dehydration stress-induced protein mRNA, complete cds Length = 695 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 364 tcggtggcgagccactgctcga 385 |||||||||||||||||||||| Sbjct: 442 tcggtggcgagccactgctcga 421
>emb|AL928821.6| Zebrafish DNA sequence from clone CH211-127N10, complete sequence Length = 153232 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 cagaaattggccggccaaaact 156 |||||||||||||||||||||| Sbjct: 85792 cagaaattggccggccaaaact 85813
>ref|XM_370302.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06799.4) partial mRNA Length = 2388 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 635 ccagcagcgtcacaccgatcgccgagtcc 663 ||||||||| || |||||||||||||||| Sbjct: 1690 ccagcagcgacagaccgatcgccgagtcc 1662
>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0079L11, complete sequence Length = 124104 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 ggcgaggcgtcggtggcgagc 375 ||||||||||||||||||||| Sbjct: 111900 ggcgaggcgtcggtggcgagc 111920
>emb|AL928636.8| Human DNA sequence from clone RP13-417F5 on chromosome X, complete sequence Length = 171922 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 catacttttacaacaacaata 217 ||||||||||||||||||||| Sbjct: 148329 catacttttacaacaacaata 148349
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 ggcgaggcgtcggtggcgagc 375 ||||||||||||||||||||| Sbjct: 13594287 ggcgaggcgtcggtggcgagc 13594307
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 ggcgaggcgtcggtggcgagc 375 ||||||||||||||||||||| Sbjct: 1450238 ggcgaggcgtcggtggcgagc 1450258
>gb|AC027661.1| Oryza sativa (japonica cultivar-group) BAC nbxb0049A03 chromosome 10, complete sequence Length = 162101 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 ggcgaggcgtcggtggcgagc 375 ||||||||||||||||||||| Sbjct: 63289 ggcgaggcgtcggtggcgagc 63309
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 42.1 bits (21), Expect = 2.3 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 355 ggcgaggcg-tcggtggcgagccactgct 382 ||||||||| ||||||||||||||||||| Sbjct: 85480 ggcgaggcggtcggtggcgagccactgct 85452
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 ggcgaggcgtcggtggcgagc 375 ||||||||||||||||||||| Sbjct: 13601629 ggcgaggcgtcggtggcgagc 13601649
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12, complete sequence Length = 144455 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 ggcgaggcgtcggtggcgagc 375 ||||||||||||||||||||| Sbjct: 44318 ggcgaggcgtcggtggcgagc 44338
>gb|AF420594.1| Streptomyces noursei rearranged polyketide synthase (nysCd48) gene, partial cds Length = 2706 Score = 42.1 bits (21), Expect = 2.3 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 355 ggcgaggcg-tcggtggcgagccactgct 382 ||||||||| ||||||||||||||||||| Sbjct: 879 ggcgaggcggtcggtggcgagccactgct 851
>gb|AC016368.3| Drosophila melanogaster clone BACR36A03, complete sequence Length = 165876 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 gccggcgcccatcatgccgc 589 |||||||||||||||||||| Sbjct: 5529 gccggcgcccatcatgccgc 5548
>gb|AC008257.6| Drosophila melanogaster clone BACR08A11, complete sequence Length = 170478 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 gccggcgcccatcatgccgc 589 |||||||||||||||||||| Sbjct: 103685 gccggcgcccatcatgccgc 103704
>ref|XM_876981.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 9 (LOC512236), mRNA Length = 3558 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 tgccgtccgagcccagcagc 642 |||||||||||||||||||| Sbjct: 1726 tgccgtccgagcccagcagc 1745
>ref|XM_876932.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 8 (LOC512236), mRNA Length = 3521 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 tgccgtccgagcccagcagc 642 |||||||||||||||||||| Sbjct: 1726 tgccgtccgagcccagcagc 1745
>ref|XM_876862.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 7 (LOC512236), mRNA Length = 4116 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 tgccgtccgagcccagcagc 642 |||||||||||||||||||| Sbjct: 1726 tgccgtccgagcccagcagc 1745
>ref|XM_611432.2| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 1 (LOC512236), mRNA Length = 5126 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 tgccgtccgagcccagcagc 642 |||||||||||||||||||| Sbjct: 1726 tgccgtccgagcccagcagc 1745
>ref|XM_876743.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 6 (LOC512236), mRNA Length = 4048 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 tgccgtccgagcccagcagc 642 |||||||||||||||||||| Sbjct: 1726 tgccgtccgagcccagcagc 1745
>ref|XM_876689.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 5 (LOC512236), mRNA Length = 3897 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 tgccgtccgagcccagcagc 642 |||||||||||||||||||| Sbjct: 1726 tgccgtccgagcccagcagc 1745
>ref|XM_876628.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 4 (LOC512236), mRNA Length = 4355 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 tgccgtccgagcccagcagc 642 |||||||||||||||||||| Sbjct: 1726 tgccgtccgagcccagcagc 1745
>ref|XM_865636.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 3 (LOC512236), mRNA Length = 3555 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 tgccgtccgagcccagcagc 642 |||||||||||||||||||| Sbjct: 1726 tgccgtccgagcccagcagc 1745
>emb|Z81050.1|CEC50B6 Caenorhabditis elegans Cosmid C50B6, complete sequence Length = 41322 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 acttttacaacaacaataatatgt 223 ||||||||||||||||| |||||| Sbjct: 28304 acttttacaacaacaatgatatgt 28327
>emb|CR656451.2|CNS0F5HL Tetraodon nigroviridis full-length cDNA Length = 1553 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cctggcctcgtggcccttggccgc 311 ||||||||||||||| |||||||| Sbjct: 607 cctggcctcgtggccgttggccgc 584
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 650 cgatcgccgagtccgtcccg 669 |||||||||||||||||||| Sbjct: 276931 cgatcgccgagtccgtcccg 276950
>emb|BX004866.22| Mouse DNA sequence from clone RP23-360A7 on chromosome 4 Contains a ribosomal protein 7a (Rpl7a) pseudogene, complete sequence Length = 161600 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 acagcttgtcctcaatttga 73 |||||||||||||||||||| Sbjct: 69531 acagcttgtcctcaatttga 69512
>gb|AC109441.3| Homo sapiens chromosome 5 clone CTC-269P20, complete sequence Length = 89908 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cttttacaacaacaataata 220 |||||||||||||||||||| Sbjct: 3438 cttttacaacaacaataata 3419
>ref|NM_165468.1| Drosophila melanogaster bicoid-interacting protein 3 CG8276-RA, transcript variant A (bin3), mRNA Length = 4821 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 gccggcgcccatcatgccgc 589 |||||||||||||||||||| Sbjct: 1156 gccggcgcccatcatgccgc 1175
>ref|NM_078902.2| Drosophila melanogaster bicoid-interacting protein 3 CG8276-RB, transcript variant B (bin3), mRNA Length = 4762 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 gccggcgcccatcatgccgc 589 |||||||||||||||||||| Sbjct: 1097 gccggcgcccatcatgccgc 1116
>gb|AC010584.5| Homo sapiens chromosome 5 clone CTC-218H9, complete sequence Length = 113216 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cttttacaacaacaataata 220 |||||||||||||||||||| Sbjct: 51907 cttttacaacaacaataata 51926
>gb|AY052142.1| Drosophila melanogaster SD09926 full length cDNA Length = 4797 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 gccggcgcccatcatgccgc 589 |||||||||||||||||||| Sbjct: 1132 gccggcgcccatcatgccgc 1151
>gb|BT004890.1| Drosophila melanogaster RE52324 full insert cDNA Length = 4768 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 gccggcgcccatcatgccgc 589 |||||||||||||||||||| Sbjct: 1095 gccggcgcccatcatgccgc 1114
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 ggcccttggccgccttcttgtggc 322 ||||||||||| |||||||||||| Sbjct: 1945147 ggcccttggcctccttcttgtggc 1945124
>gb|AF097636.1|AF097636 Drosophila melanogaster bicoid-interacting protein BIN3 (bin3) mRNA, complete cds Length = 4588 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 gccggcgcccatcatgccgc 589 |||||||||||||||||||| Sbjct: 918 gccggcgcccatcatgccgc 937
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 544 aggttgccgcgctcgtaatagtcg 567 |||||||||||||||| ||||||| Sbjct: 5588839 aggttgccgcgctcgtcatagtcg 5588862
>gb|AE003784.5| Drosophila melanogaster chromosome 2R, section 5 of 73 of the complete sequence Length = 305162 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 gccggcgcccatcatgccgc 589 |||||||||||||||||||| Sbjct: 280298 gccggcgcccatcatgccgc 280317
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 gagctgctgcgcgcagccca 412 |||||||||||||||||||| Sbjct: 732173 gagctgctgcgcgcagccca 732192 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,535,368 Number of Sequences: 3902068 Number of extensions: 3535368 Number of successful extensions: 78581 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77932 Number of HSP's gapped (non-prelim): 642 length of query: 673 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 650 effective length of database: 17,143,297,704 effective search space: 11143143507600 effective search space used: 11143143507600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
