ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13k17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463165.1| Oryza sativa (japonica cultivar-group), mRNA 482 e-133
2dbj|AK065587.1| Oryza sativa (japonica cultivar-group) cDNA clon... 474 e-130
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 178 2e-41
4gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genom... 178 2e-41
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 178 2e-41
6ref|NM_100322.4| Arabidopsis thaliana aldo-keto reductase/ oxido... 58 4e-05
7gb|AY122940.1| Arabidopsis thaliana unknown protein (At1g04420) ... 58 4e-05
8gb|AY065361.1| Arabidopsis thaliana unknown protein (At1g04420) ... 58 4e-05
9emb|BX817636.1|CNS0AB2W Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
10gb|AE009072.1| Agrobacterium tumefaciens str. C58 circular chrom... 56 2e-04
11gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 56 2e-04
12gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete se... 50 0.010
13gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis tha... 50 0.010
14ref|XM_658407.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.59
15emb|BX814906.1|CNS0ABC7 Arabidopsis thaliana Full-length cDNA Co... 44 0.59
16emb|BX005477.7| Zebrafish DNA sequence from clone CH211-131K10 i... 44 0.59
17gb|BC106769.1| Mus musculus potassium intermediate/small conduct... 42 2.3
18gb|BC106770.1| Mus musculus potassium intermediate/small conduct... 42 2.3
19gb|AC166364.2| Mus musculus BAC clone RP24-394E6 from chromosome... 42 2.3
20gb|AF031815.1| Homo sapiens calcium-activated potassium channel ... 42 2.3
21gb|AC008356.6| Drosophila melanogaster clone BACR43K14, complete... 42 2.3
22gb|AY258142.1| Homo sapiens small-conductance calcium-activated ... 42 2.3
23ref|NM_080466.1| Mus musculus potassium intermediate/small condu... 42 2.3
24gb|AY049734.1| Homo sapiens small-conductance calcium-activated ... 42 2.3
25gb|AC103605.8| Mus musculus chromosome 3, clone RP23-335H1, comp... 42 2.3
26ref|XM_989192.1| PREDICTED: Mus musculus similar to Small conduc... 42 2.3
27gb|AF357241.1| Mus musculus small-conductance calcium-activated ... 42 2.3
28emb|AL954342.10| Human DNA sequence from clone RP11-343L13 on ch... 42 2.3
29gb|BC042147.1| Homo sapiens potassium intermediate/small conduct... 42 2.3
30emb|AJ251016.1|HSA251016 Homo sapiens mRNA for calcium-activated... 42 2.3
31emb|CR595038.1| full-length cDNA clone CS0DL006YN21 of B cells (... 42 2.3
32gb|AF284345.1| Rattus norvegicus calcium-activated potassium cha... 42 2.3
33gb|AC078992.23| Homo sapiens 12q BAC RP11-144F15 (Roswell Park C... 42 2.3
34ref|NM_002249.3| Homo sapiens potassium intermediate/small condu... 42 2.3
35ref|NM_170782.1| Homo sapiens potassium intermediate/small condu... 42 2.3
36dbj|AK137738.1| Mus musculus 6 days neonate skin cDNA, RIKEN ful... 42 2.3
37gb|AF438203.1|AF438203 Homo sapiens small conductance calcium-ac... 42 2.3
38gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 2.3
39ref|XM_686715.1| PREDICTED: Danio rerio similar to Small conduct... 42 2.3
40ref|XM_686507.1| PREDICTED: Danio rerio similar to Small conduct... 42 2.3
41gb|AF292389.1|AF292389 Rattus norvegicus calcium-activated potas... 42 2.3
42gb|AY138900.1| Homo sapiens small conductance calcium-activated ... 42 2.3
43gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-ac... 42 2.3
44ref|NM_213985.1| Sus scrofa calcium activated potassium channel ... 42 2.3
45gb|AC016708.11| Homo sapiens BAC clone RP11-223M6 from 2, comple... 42 2.3
46ref|NM_019315.2| Rattus norvegicus potassium intermediate/small ... 42 2.3
47gb|AY038049.1| Sus scrofa calcium activated potassium channel SK... 42 2.3
48gb|AE003682.4| Drosophila melanogaster chromosome 3R, section 20... 42 2.3
49emb|BX530024.6| Zebrafish DNA sequence from clone RP71-39B20, co... 42 2.3
50gb|AC104327.6| Mus musculus strain C57BL/6J clone rp23-295a4 map... 42 2.3
51gb|U69884.1|RRU69884 Rattus norvegicus calcium-activated potassi... 42 2.3
52gb|DQ140280.1| Mus musculus small conductance calcium-activated ... 42 2.3
53gb|U56393.1|DMU56393 Drosophila melanogaster chromosomal protein... 42 2.3
54emb|Y08263.1|HSAAD14 H.sapiens mRNA for AAD14 protein, partial 42 2.3
55ref|XM_638766.1| Dictyostelium discoideum hypothetical protein (... 40 9.2
56gb|U91324.1|HUU91324 Homo sapiens Chromosome 16 BAC clone CIT987... 40 9.2
57ref|XM_547563.2| PREDICTED: Canis familiaris similar to Small co... 40 9.2
58emb|AL691420.13| Human DNA sequence from clone RP11-352C6 on chr... 40 9.2
59gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 40 9.2
60ref|XM_788557.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.2
61gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 9.2
62gb|AC090150.9| Homo sapiens chromosome 8, clone RP11-521M14, com... 40 9.2
63gb|AC112217.2| Homo sapiens chromosome 3 clone CTD-2028L5, compl... 40 9.2
64gb|AC099054.2| Homo sapiens chromosome 3 clone RP11-489C3, compl... 40 9.2
65gb|AC124649.6| Homo sapiens chromosome 8, clone RP11-23I8, compl... 40 9.2
66gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 9.2
67dbj|AK082700.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 9.2
68gb|AC107387.6| Homo sapiens BAC clone RP11-321I11 from 2, comple... 40 9.2
69gb|AC006062.5| Homo sapiens X BAC GS1-199J3 (Genome Systems Huma... 40 9.2
70gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175... 40 9.2
71gb|AC073533.19| Homo sapiens X BAC RP11-589J20 (Roswell Park Can... 40 9.2
72dbj|AP006255.1| Homo sapiens genomic DNA, chromosome 9, clone:RP... 40 9.2
73emb|AL808114.11| Mouse DNA sequence from clone RP23-146A17 on ch... 40 9.2
74emb|AL731839.13| Mouse DNA sequence from clone RP23-76O22 on chr... 40 9.2
75dbj|AB020871.1| Homo sapiens genomic DNA of 9q32 anti-oncogene o... 40 9.2 
>ref|XM_463165.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1618

 Score =  482 bits (243), Expect = e-133
 Identities = 421/479 (87%), Gaps = 1/479 (0%)
 Strand = Plus / Minus

                                                                        
Query: 193  atgtcatcgaggacttgcggcggcagaggccgcggagcgctggtaaatgcatcgatgttc 252
            |||||||| || |||| ||| | || |||||| ||||| |||||||||||||| ||||||
Sbjct: 1332 atgtcatcaagaacttccggtgccaaaggccgtggagcactggtaaatgcatcaatgttc 1273

                                                                        
Query: 253  tccttcaactgatccatggtggtcgctccgatgatggtgctggctgtaaaagggcggtca 312
            |||||||||||||||||||| || ||||||||||| ||||| ||||| || || ||||||
Sbjct: 1272 tccttcaactgatccatggtcgttgctccgatgattgtgctagctgtgaatggacggtca 1213

                                                                        
Query: 313  cgcacgaagccaagggcaagctggacaggtgttagcccatgcttcttggcaagcttgaca 372
            ||||| ||||| || ||||||||||| || ||||| || |||||||||||||||||||||
Sbjct: 1212 cgcacaaagcccagtgcaagctggactggagttaggccgtgcttcttggcaagcttgaca 1153

                                                                        
Query: 373  tactcgtctgttgcttctttagccaaagatgcgttgtagcgctccatgtatcccgggaag 432
            || || |  ||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 1152 tattcattcgttgcttctttagccaacgatgcattgtagcgctccatgtatccagggaag 1093

                                                                        
Query: 433  agattcagcctgctcctctttgcattggcagagttagcatcaagatactttccgctgaga 492
            ||||| ||||||||| ||||||   || ||| ||||| ||||| |||||| ||  |||||
Sbjct: 1092 agatttagcctgctcttctttgatatgtcagggttagtatcaatatacttcccagtgaga 1033

                                                                        
Query: 493  acgccacccgccaatggggagtaggcaagcagcccaatattgcagttatttgggtggcag 552
            || || || |||||||| ||||||||||||| ||||| ||| ||||||||||||||||| 
Sbjct: 1032 acacctccagccaatggagagtaggcaagcaacccaacattacagttatttgggtggcac 973

                                                                        
Query: 553  acctcaacaagatcaacttcaaagcggcatctcacaattagactataactgttctggatg 612
            || |||||||| |||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 972  acttcaacaaggtcaacttcaaagtgacatctcacaattagactataactgttctggatg 913

                                                                       
Query: 613  ctcacaatctttggaagtcccttgaagttttgcagcctgtacaaactccatcactccat 671
            |||||||||||||||||| |||||||  |||||||| ||||||||||||||||||||||
Sbjct: 912  ctcacaatctttggaagt-ccttgaacctttgcagcatgtacaaactccatcactccat 855
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>dbj|AK065587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030E14, full
            insert sequence
          Length = 1606

 Score =  474 bits (239), Expect = e-130
 Identities = 420/479 (87%), Gaps = 1/479 (0%)
 Strand = Plus / Minus

                                                                        
Query: 193  atgtcatcgaggacttgcggcggcagaggccgcggagcgctggtaaatgcatcgatgttc 252
            |||||||| || |||| ||| | || |||||| ||||| |||||||||||||| ||||||
Sbjct: 1370 atgtcatcaagaacttccggtgccaaaggccgtggagcactggtaaatgcatcaatgttc 1311

                                                                        
Query: 253  tccttcaactgatccatggtggtcgctccgatgatggtgctggctgtaaaagggcggtca 312
            |||||||||||||||||||| || ||||||||||| ||||| ||||| ||  | ||||||
Sbjct: 1310 tccttcaactgatccatggtcgttgctccgatgattgtgctagctgtgaatcgacggtca 1251

                                                                        
Query: 313  cgcacgaagccaagggcaagctggacaggtgttagcccatgcttcttggcaagcttgaca 372
            ||||| ||||| || ||||||||||| || ||||| || |||||||||||||||||||||
Sbjct: 1250 cgcacaaagcccagtgcaagctggactggagttaggccgtgcttcttggcaagcttgaca 1191

                                                                        
Query: 373  tactcgtctgttgcttctttagccaaagatgcgttgtagcgctccatgtatcccgggaag 432
            || || |  ||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 1190 tattcattcgttgcttctttagccaacgatgcattgtagcgctccatgtatccagggaag 1131

                                                                        
Query: 433  agattcagcctgctcctctttgcattggcagagttagcatcaagatactttccgctgaga 492
            ||||| ||||||||| ||||||   || ||| ||||| ||||| |||||| ||  |||||
Sbjct: 1130 agatttagcctgctcttctttgatatgtcagggttagtatcaatatacttcccagtgaga 1071

                                                                        
Query: 493  acgccacccgccaatggggagtaggcaagcagcccaatattgcagttatttgggtggcag 552
            || || || |||||||| ||||||||||||| ||||| ||| ||||||||||||||||| 
Sbjct: 1070 acacctccagccaatggagagtaggcaagcaacccaacattacagttatttgggtggcac 1011

                                                                        
Query: 553  acctcaacaagatcaacttcaaagcggcatctcacaattagactataactgttctggatg 612
            || |||||||| |||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 1010 acttcaacaaggtcaacttcaaagtgacatctcacaattagactataactgttctggatg 951

                                                                       
Query: 613  ctcacaatctttggaagtcccttgaagttttgcagcctgtacaaactccatcactccat 671
            |||||||||||||||||| |||||||  |||||||| ||||||||||||||||||||||
Sbjct: 950  ctcacaatctttggaagt-ccttgaacctttgcagcatgtacaaactccatcactccat 893
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  178 bits (90), Expect = 2e-41
 Identities = 159/182 (87%)
 Strand = Plus / Minus

                                                                            
Query: 193      atgtcatcgaggacttgcggcggcagaggccgcggagcgctggtaaatgcatcgatgttc 252
                |||||||| || |||| ||| | || |||||| ||||| |||||||||||||| ||||||
Sbjct: 22897858 atgtcatcaagaacttccggtgccaaaggccgtggagcactggtaaatgcatcaatgttc 22897799

                                                                            
Query: 253      tccttcaactgatccatggtggtcgctccgatgatggtgctggctgtaaaagggcggtca 312
                |||||||||||||||||||| || ||||||||||| ||||| ||||| || || ||||||
Sbjct: 22897798 tccttcaactgatccatggtcgttgctccgatgattgtgctagctgtgaatggacggtca 22897739

                                                                            
Query: 313      cgcacgaagccaagggcaagctggacaggtgttagcccatgcttcttggcaagcttgaca 372
                ||||| ||||| || ||||||||||| || ||||| || |||||||||||||||||||||
Sbjct: 22897738 cgcacaaagcccagtgcaagctggactggagttaggccgtgcttcttggcaagcttgaca 22897679

                  
Query: 373      ta 374
                ||
Sbjct: 22897678 ta 22897677



 Score =  163 bits (82), Expect = 9e-37
 Identities = 157/182 (86%)
 Strand = Plus / Minus

                                                                            
Query: 389      ctttagccaaagatgcgttgtagcgctccatgtatcccgggaagagattcagcctgctcc 448
                |||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||| 
Sbjct: 22897502 ctttagccaacgatgcattgtagcgctccatgtatccagggaagagatttagcctgctct 22897443

                                                                            
Query: 449      tctttgcattggcagagttagcatcaagatactttccgctgagaacgccacccgccaatg 508
                ||||||   || ||| ||||| ||||| |||||| ||  ||||||| || || |||||||
Sbjct: 22897442 tctttgatatgtcagggttagtatcaatatacttcccagtgagaacacctccagccaatg 22897383

                                                                            
Query: 509      gggagtaggcaagcagcccaatattgcagttatttgggtggcagacctcaacaagatcaa 568
                | ||||||||||||| ||||| ||| ||||||||||||||||| || |||||||| ||||
Sbjct: 22897382 gagagtaggcaagcaacccaacattacagttatttgggtggcacacttcaacaaggtcaa 22897323

                  
Query: 569      ct 570
                ||
Sbjct: 22897322 ct 22897321



 Score =  149 bits (75), Expect = 1e-32
 Identities = 97/103 (94%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                            
Query: 569      cttcaaagcggcatctcacaattagactataactgttctggatgctcacaatctttggaa 628
                |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22897021 cttcaaagtgacatctcacaattagactataactgttctggatgctcacaatctttggaa 22896962

                                                           
Query: 629      gtcccttgaagttttgcagcctgtacaaactccatcactccat 671
                || |||||||  |||||||| ||||||||||||||||||||||
Sbjct: 22896961 gt-ccttgaacctttgcagcatgtacaaactccatcactccat 22896920
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>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete
              sequence
          Length = 184783

 Score =  178 bits (90), Expect = 2e-41
 Identities = 159/182 (87%)
 Strand = Plus / Minus

                                                                          
Query: 193    atgtcatcgaggacttgcggcggcagaggccgcggagcgctggtaaatgcatcgatgttc 252
              |||||||| || |||| ||| | || |||||| ||||| |||||||||||||| ||||||
Sbjct: 100388 atgtcatcaagaacttccggtgccaaaggccgtggagcactggtaaatgcatcaatgttc 100329

                                                                          
Query: 253    tccttcaactgatccatggtggtcgctccgatgatggtgctggctgtaaaagggcggtca 312
              |||||||||||||||||||| || ||||||||||| ||||| ||||| || || ||||||
Sbjct: 100328 tccttcaactgatccatggtcgttgctccgatgattgtgctagctgtgaatggacggtca 100269

                                                                          
Query: 313    cgcacgaagccaagggcaagctggacaggtgttagcccatgcttcttggcaagcttgaca 372
              ||||| ||||| || ||||||||||| || ||||| || |||||||||||||||||||||
Sbjct: 100268 cgcacaaagcccagtgcaagctggactggagttaggccgtgcttcttggcaagcttgaca 100209

                
Query: 373    ta 374
              ||
Sbjct: 100208 ta 100207



 Score =  163 bits (82), Expect = 9e-37
 Identities = 157/182 (86%)
 Strand = Plus / Minus

                                                                          
Query: 389    ctttagccaaagatgcgttgtagcgctccatgtatcccgggaagagattcagcctgctcc 448
              |||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||| 
Sbjct: 100032 ctttagccaacgatgcattgtagcgctccatgtatccagggaagagatttagcctgctct 99973

                                                                          
Query: 449    tctttgcattggcagagttagcatcaagatactttccgctgagaacgccacccgccaatg 508
              ||||||   || ||| ||||| ||||| |||||| ||  ||||||| || || |||||||
Sbjct: 99972  tctttgatatgtcagggttagtatcaatatacttcccagtgagaacacctccagccaatg 99913

                                                                          
Query: 509    gggagtaggcaagcagcccaatattgcagttatttgggtggcagacctcaacaagatcaa 568
              | ||||||||||||| ||||| ||| ||||||||||||||||| || |||||||| ||||
Sbjct: 99912  gagagtaggcaagcaacccaacattacagttatttgggtggcacacttcaacaaggtcaa 99853

                
Query: 569    ct 570
              ||
Sbjct: 99852  ct 99851



 Score =  149 bits (75), Expect = 1e-32
 Identities = 97/103 (94%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                         
Query: 569   cttcaaagcggcatctcacaattagactataactgttctggatgctcacaatctttggaa 628
             |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99551 cttcaaagtgacatctcacaattagactataactgttctggatgctcacaatctttggaa 99492

                                                        
Query: 629   gtcccttgaagttttgcagcctgtacaaactccatcactccat 671
             || |||||||  |||||||| ||||||||||||||||||||||
Sbjct: 99491 gt-ccttgaacctttgcagcatgtacaaactccatcactccat 99450
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  178 bits (90), Expect = 2e-41
 Identities = 159/182 (87%)
 Strand = Plus / Minus

                                                                            
Query: 193      atgtcatcgaggacttgcggcggcagaggccgcggagcgctggtaaatgcatcgatgttc 252
                |||||||| || |||| ||| | || |||||| ||||| |||||||||||||| ||||||
Sbjct: 22890886 atgtcatcaagaacttccggtgccaaaggccgtggagcactggtaaatgcatcaatgttc 22890827

                                                                            
Query: 253      tccttcaactgatccatggtggtcgctccgatgatggtgctggctgtaaaagggcggtca 312
                |||||||||||||||||||| || ||||||||||| ||||| ||||| || || ||||||
Sbjct: 22890826 tccttcaactgatccatggtcgttgctccgatgattgtgctagctgtgaatggacggtca 22890767

                                                                            
Query: 313      cgcacgaagccaagggcaagctggacaggtgttagcccatgcttcttggcaagcttgaca 372
                ||||| ||||| || ||||||||||| || ||||| || |||||||||||||||||||||
Sbjct: 22890766 cgcacaaagcccagtgcaagctggactggagttaggccgtgcttcttggcaagcttgaca 22890707

                  
Query: 373      ta 374
                ||
Sbjct: 22890706 ta 22890705



 Score =  163 bits (82), Expect = 9e-37
 Identities = 157/182 (86%)
 Strand = Plus / Minus

                                                                            
Query: 389      ctttagccaaagatgcgttgtagcgctccatgtatcccgggaagagattcagcctgctcc 448
                |||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||| 
Sbjct: 22890530 ctttagccaacgatgcattgtagcgctccatgtatccagggaagagatttagcctgctct 22890471

                                                                            
Query: 449      tctttgcattggcagagttagcatcaagatactttccgctgagaacgccacccgccaatg 508
                ||||||   || ||| ||||| ||||| |||||| ||  ||||||| || || |||||||
Sbjct: 22890470 tctttgatatgtcagggttagtatcaatatacttcccagtgagaacacctccagccaatg 22890411

                                                                            
Query: 509      gggagtaggcaagcagcccaatattgcagttatttgggtggcagacctcaacaagatcaa 568
                | ||||||||||||| ||||| ||| ||||||||||||||||| || |||||||| ||||
Sbjct: 22890410 gagagtaggcaagcaacccaacattacagttatttgggtggcacacttcaacaaggtcaa 22890351

                  
Query: 569      ct 570
                ||
Sbjct: 22890350 ct 22890349



 Score =  149 bits (75), Expect = 1e-32
 Identities = 97/103 (94%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                            
Query: 569      cttcaaagcggcatctcacaattagactataactgttctggatgctcacaatctttggaa 628
                |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22890049 cttcaaagtgacatctcacaattagactataactgttctggatgctcacaatctttggaa 22889990

                                                           
Query: 629      gtcccttgaagttttgcagcctgtacaaactccatcactccat 671
                || |||||||  |||||||| ||||||||||||||||||||||
Sbjct: 22889989 gt-ccttgaacctttgcagcatgtacaaactccatcactccat 22889948
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>ref|NM_100322.4| Arabidopsis thaliana aldo-keto reductase/ oxidoreductase AT1G04420
           mRNA, complete cds
          Length = 1450

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 101/125 (80%)
 Strand = Plus / Minus

                                                                       
Query: 508 ggggagtaggcaagcagcccaatattgcagttatttgggtggcagacctcaacaagatca 567
           ||||| || |||||||  |||| |||||| || ||||||||||| || || || ||||||
Sbjct: 907 ggggaataagcaagcaagccaacattgcaattttttgggtggcatacttctaccagatca 848

                                                                       
Query: 568 acttcaaagcggcatctcacaattagactataactgttctggatgctcacaatctttgga 627
           |||||| | || ||||| || |  |  || ||||  ||||||||||||||||||||||| 
Sbjct: 847 acttcataccgacatctaactagcaagctgtaaccattctggatgctcacaatctttggt 788

                
Query: 628 agtcc 632
           |||||
Sbjct: 787 agtcc 783
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>gb|AY122940.1| Arabidopsis thaliana unknown protein (At1g04420) mRNA, complete cds
          Length = 1270

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 101/125 (80%)
 Strand = Plus / Minus

                                                                       
Query: 508 ggggagtaggcaagcagcccaatattgcagttatttgggtggcagacctcaacaagatca 567
           ||||| || |||||||  |||| |||||| || ||||||||||| || || || ||||||
Sbjct: 881 ggggaataagcaagcaagccaacattgcaattttttgggtggcatacttctaccagatca 822

                                                                       
Query: 568 acttcaaagcggcatctcacaattagactataactgttctggatgctcacaatctttgga 627
           |||||| | || ||||| || |  |  || ||||  ||||||||||||||||||||||| 
Sbjct: 821 acttcataccgacatctaactagcaagctgtaaccattctggatgctcacaatctttggt 762

                
Query: 628 agtcc 632
           |||||
Sbjct: 761 agtcc 757
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>gb|AY065361.1| Arabidopsis thaliana unknown protein (At1g04420) mRNA, complete cds
          Length = 1464

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 101/125 (80%)
 Strand = Plus / Minus

                                                                       
Query: 508 ggggagtaggcaagcagcccaatattgcagttatttgggtggcagacctcaacaagatca 567
           ||||| || |||||||  |||| |||||| || ||||||||||| || || || ||||||
Sbjct: 902 ggggaataagcaagcaagccaacattgcaattttttgggtggcatacttctaccagatca 843

                                                                       
Query: 568 acttcaaagcggcatctcacaattagactataactgttctggatgctcacaatctttgga 627
           |||||| | || ||||| || |  |  || ||||  ||||||||||||||||||||||| 
Sbjct: 842 acttcataccgacatctaactagcaagctgtaaccattctggatgctcacaatctttggt 783

                
Query: 628 agtcc 632
           |||||
Sbjct: 782 agtcc 778
to top
>emb|BX817636.1|CNS0AB2W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL34ZB08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1403

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 101/125 (80%)
 Strand = Plus / Minus

                                                                       
Query: 508 ggggagtaggcaagcagcccaatattgcagttatttgggtggcagacctcaacaagatca 567
           ||||| || |||||||  |||| |||||| || ||||||||||| || || || ||||||
Sbjct: 915 ggggaataagcaagcaagccaacattgcaattttttgggtggcatacttctaccagatca 856

                                                                       
Query: 568 acttcaaagcggcatctcacaattagactataactgttctggatgctcacaatctttgga 627
           |||||| | || ||||| || |  |  || ||||  ||||||||||||||||||||||| 
Sbjct: 855 acttcataccgacatctaactagcaagctgtaaccattctggatgctcacaatctttggt 796

                
Query: 628 agtcc 632
           |||||
Sbjct: 795 agtcc 791
to top
>gb|AE009072.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 98 of
             256 of the complete sequence
          Length = 11368

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 254   ccttcaactgatccatggtggtcgctccgatgatgg 289
             |||||||||| |||||||||||||| ||||||||||
Sbjct: 10300 ccttcaactgttccatggtggtcgcgccgatgatgg 10335
to top
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                   
Query: 254     ccttcaactgatccatggtggtcgctccgatgatgg 289
               |||||||||| |||||||||||||| ||||||||||
Sbjct: 1082656 ccttcaactgttccatggtggtcgcgccgatgatgg 1082691
to top
>gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete sequence
          Length = 129053

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 65/77 (84%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                         
Query: 595   ctataactgttctggatgctcacaatctttggaagtcccttgaagttttgcagcctgtac 654
             ||||| ||||| ||||| || |||||||||||||||||| | || ||| ||||| || ||
Sbjct: 27791 ctatagctgttttggatactgacaatctttggaagtccc-tcaactttagcagcatggac 27849

                              
Query: 655   aaactccatcactccat 671
              || |||||||||||||
Sbjct: 27850 gaattccatcactccat 27866
to top
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 107527

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 604   ttctggatgctcacaatctttggaagtcc 632
             ||||||||||||||||||||||| |||||
Sbjct: 40179 ttctggatgctcacaatctttggtagtcc 40207
to top
>ref|XM_658407.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5895.2), mRNA
          Length = 1407

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 171 gtatttcttgaaaagaatctcaatgt 196
           |||||||||||||||| |||||||||
Sbjct: 174 gtatttcttgaaaagagtctcaatgt 149
to top
>emb|BX814906.1|CNS0ABC7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS18ZB06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1415

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 508 ggggagtaggcaagcagcccaatattgcagttatttgggtggcagacctcaacaagatca 567
           ||||| || |||||||  |||| |||||| || ||||||||||| || || || ||||||
Sbjct: 893 ggggaataagcaagcaagccaacattgcaattttttgggtggcatacttctaccagatca 834

                 
Query: 568 acttca 573
           ||||||
Sbjct: 833 acttca 828
to top
>emb|BX005477.7| Zebrafish DNA sequence from clone CH211-131K10 in linkage group 13,
              complete sequence
          Length = 169924

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 643    tgcagcctgtacaaactccatc 664
              ||||||||||||||||||||||
Sbjct: 127564 tgcagcctgtacaaactccatc 127543
to top
>gb|BC106769.1| Mus musculus potassium intermediate/small conductance
            calcium-activated channel, subfamily N, member 3, mRNA
            (cDNA clone MGC:123421 IMAGE:40039722), complete cds
          Length = 2269

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1367 cctcaacaagatcaacttcaa 1387
to top
>gb|BC106770.1| Mus musculus potassium intermediate/small conductance
            calcium-activated channel, subfamily N, member 3, mRNA
            (cDNA clone MGC:123422 IMAGE:40039723), complete cds
          Length = 2269

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1367 cctcaacaagatcaacttcaa 1387
to top
>gb|AC166364.2| Mus musculus BAC clone RP24-394E6 from chromosome 3, complete sequence
          Length = 227070

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 554    cctcaacaagatcaacttcaa 574
              |||||||||||||||||||||
Sbjct: 135553 cctcaacaagatcaacttcaa 135533
to top
>gb|AF031815.1| Homo sapiens calcium-activated potassium channel (KCNN3) mRNA,
            complete cds
          Length = 2521

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1603 cctcaacaagatcaacttcaa 1623
to top
>gb|AC008356.6| Drosophila melanogaster clone BACR43K14, complete sequence
          Length = 162593

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    ttgaaagaaacaaagcaatgt 49
             |||||||||||||||||||||
Sbjct: 61976 ttgaaagaaacaaagcaatgt 61956
to top
>gb|AY258142.1| Homo sapiens small-conductance calcium-activated potassium channel
            SK3 (SK3) mRNA, complete cds
          Length = 2214

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1335 cctcaacaagatcaacttcaa 1355
to top
>ref|NM_080466.1| Mus musculus potassium intermediate/small conductance
            calcium-activated channel, subfamily N, member 3 (Kcnn3),
            mRNA
          Length = 2287

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1365 cctcaacaagatcaacttcaa 1385
to top
>gb|AY049734.1| Homo sapiens small-conductance calcium-activated potassium channel
            SK3 (KCNN3) mRNA, complete cds
          Length = 2393

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1402 cctcaacaagatcaacttcaa 1422
to top
>gb|AC103605.8| Mus musculus chromosome 3, clone RP23-335H1, complete sequence
          Length = 222210

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 554    cctcaacaagatcaacttcaa 574
              |||||||||||||||||||||
Sbjct: 113724 cctcaacaagatcaacttcaa 113704
to top
>ref|XM_989192.1| PREDICTED: Mus musculus similar to Small conductance
            calcium-activated potassium channel protein 3 (SK3)
            (LOC671802), mRNA
          Length = 1891

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1630 cctcaacaagatcaacttcaa 1650
to top
>gb|AF357241.1| Mus musculus small-conductance calcium-activated potassium channel
            SK3 (SK3) mRNA, complete cds
          Length = 2287

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1365 cctcaacaagatcaacttcaa 1385
to top
>emb|AL954342.10| Human DNA sequence from clone RP11-343L13 on chromosome 1 Contains part
             of the KCNN3 gene for potassium intermediate/small
             conductance calcium-activated channel, subfamily N, member
             3, complete sequence
          Length = 28342

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 554   cctcaacaagatcaacttcaa 574
             |||||||||||||||||||||
Sbjct: 14454 cctcaacaagatcaacttcaa 14434
to top
>gb|BC042147.1| Homo sapiens potassium intermediate/small conductance
           calcium-activated channel, subfamily N, member 3,
           transcript variant 2, mRNA (cDNA clone MGC:52352
           IMAGE:3619576), complete cds
          Length = 1965

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 554 cctcaacaagatcaacttcaa 574
           |||||||||||||||||||||
Sbjct: 533 cctcaacaagatcaacttcaa 553
to top
>emb|AJ251016.1|HSA251016 Homo sapiens mRNA for calcium-activated potassium channel SK3 (K3
            (KCNN3) gene)
          Length = 3095

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1665 cctcaacaagatcaacttcaa 1685
to top
>emb|CR595038.1| full-length cDNA clone CS0DL006YN21 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1928

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 554 cctcaacaagatcaacttcaa 574
           |||||||||||||||||||||
Sbjct: 482 cctcaacaagatcaacttcaa 502
to top
>gb|AF284345.1| Rattus norvegicus calcium-activated potassium channel SK3 mRNA,
            complete cds
          Length = 2193

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1314 cctcaacaagatcaacttcaa 1334
to top
>gb|AC078992.23| Homo sapiens 12q BAC RP11-144F15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 84657

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    aaacaaagcaatgtgtaataa 56
             |||||||||||||||||||||
Sbjct: 32649 aaacaaagcaatgtgtaataa 32669
to top
>ref|NM_002249.3| Homo sapiens potassium intermediate/small conductance
            calcium-activated channel, subfamily N, member 3 (KCNN3),
            transcript variant 1, mRNA
          Length = 3075

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1646 cctcaacaagatcaacttcaa 1666
to top
>ref|NM_170782.1| Homo sapiens potassium intermediate/small conductance
           calcium-activated channel, subfamily N, member 3
           (KCNN3), transcript variant 2, mRNA
          Length = 1981

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 554 cctcaacaagatcaacttcaa 574
           |||||||||||||||||||||
Sbjct: 552 cctcaacaagatcaacttcaa 572
to top
>dbj|AK137738.1| Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:A030001A14 product:potassium
            intermediate/small conductance calcium-activated channel,
            subfamily N, member 3, full insert sequence
          Length = 2528

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1626 cctcaacaagatcaacttcaa 1646
to top
>gb|AF438203.1|AF438203 Homo sapiens small conductance calcium-activated potassium channel
           mRNA, complete cds; alternatively spliced
          Length = 1953

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 554 cctcaacaagatcaacttcaa 574
           |||||||||||||||||||||
Sbjct: 530 cctcaacaagatcaacttcaa 550
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 316     acgaagccaagggcaagctgg 336
               |||||||||||||||||||||
Sbjct: 2568546 acgaagccaagggcaagctgg 2568566
to top
>ref|XM_686715.1| PREDICTED: Danio rerio similar to Small conductance calcium-activated
            potassium channel protein 2 (SK2) (LOC563352), mRNA
          Length = 2982

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 2115 cctcaacaagatcaacttcaa 2135
to top
>ref|XM_686507.1| PREDICTED: Danio rerio similar to Small conductance
           calcium-activated potassium channel protein 2 (SK2)
           (LOC563143), mRNA
          Length = 1749

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 554 cctcaacaagatcaacttcaa 574
           |||||||||||||||||||||
Sbjct: 882 cctcaacaagatcaacttcaa 902
to top
>gb|AF292389.1|AF292389 Rattus norvegicus calcium-activated potassium channel SK3 (Kcnn3)
            mRNA, complete cds
          Length = 2534

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1617 cctcaacaagatcaacttcaa 1637
to top
>gb|AY138900.1| Homo sapiens small conductance calcium-activated potassium channel
           subfamily N member 3 variant 1B (KCNN3) mRNA, complete
           cds; alternatively spliced
          Length = 1658

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 554 cctcaacaagatcaacttcaa 574
           |||||||||||||||||||||
Sbjct: 755 cctcaacaagatcaacttcaa 775
to top
>gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-activated potassium channel
             (KCNN3) gene, complete cds
          Length = 163217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 554   cctcaacaagatcaacttcaa 574
             |||||||||||||||||||||
Sbjct: 98646 cctcaacaagatcaacttcaa 98666
to top
>ref|NM_213985.1| Sus scrofa calcium activated potassium channel SK3 (KCNN3), mRNA
          Length = 2546

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1622 cctcaacaagatcaacttcaa 1642
to top
>gb|AC016708.11| Homo sapiens BAC clone RP11-223M6 from 2, complete sequence
          Length = 194304

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 170  tgtatttcttgaaaagaatct 190
            |||||||||||||||||||||
Sbjct: 1820 tgtatttcttgaaaagaatct 1800
to top
>ref|NM_019315.2| Rattus norvegicus potassium intermediate/small conductance
            calcium-activated channel, subfamily N, member 3 (Kcnn3),
            mRNA
          Length = 2534

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1617 cctcaacaagatcaacttcaa 1637
to top
>gb|AY038049.1| Sus scrofa calcium activated potassium channel SK3 (KCNN3) mRNA,
            complete cds
          Length = 2546

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1622 cctcaacaagatcaacttcaa 1642
to top
>gb|AE003682.4| Drosophila melanogaster chromosome 3R, section 20 of 118 of the
            complete sequence
          Length = 224614

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 29   ttgaaagaaacaaagcaatgt 49
            |||||||||||||||||||||
Sbjct: 1330 ttgaaagaaacaaagcaatgt 1350
to top
>emb|BX530024.6| Zebrafish DNA sequence from clone RP71-39B20, complete sequence
          Length = 146464

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 554    cctcaacaagatcaacttcaa 574
              |||||||||||||||||||||
Sbjct: 122021 cctcaacaagatcaacttcaa 122041
to top
>gb|AC104327.6| Mus musculus strain C57BL/6J clone rp23-295a4 map 3, complete sequence
          Length = 193174

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 554    cctcaacaagatcaacttcaa 574
              |||||||||||||||||||||
Sbjct: 125874 cctcaacaagatcaacttcaa 125854
to top
>gb|U69884.1|RRU69884 Rattus norvegicus calcium-activated potassium channel rSK3 (SK) mRNA,
            complete cds
          Length = 2224

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1321 cctcaacaagatcaacttcaa 1341
to top
>gb|DQ140280.1| Mus musculus small conductance calcium-activated potassium channel 3
            (Kcnn3) mRNA, complete cds
          Length = 2196

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1317 cctcaacaagatcaacttcaa 1337
to top
>gb|U56393.1|DMU56393 Drosophila melanogaster chromosomal protein D1 (D1) gene, complete
            cds
          Length = 3469

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 29   ttgaaagaaacaaagcaatgt 49
            |||||||||||||||||||||
Sbjct: 1790 ttgaaagaaacaaagcaatgt 1770
to top
>emb|Y08263.1|HSAAD14 H.sapiens mRNA for AAD14 protein, partial
          Length = 1956

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  cctcaacaagatcaacttcaa 574
            |||||||||||||||||||||
Sbjct: 1604 cctcaacaagatcaacttcaa 1624
to top
>ref|XM_638766.1| Dictyostelium discoideum hypothetical protein (DDB0167375), partial
           mRNA
          Length = 1230

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 165 gtctttgtatttcttgaaaagaatctcaatgt 196
           ||||||| |||| ||||||||||| |||||||
Sbjct: 335 gtctttggatttgttgaaaagaatttcaatgt 304
to top
>gb|U91324.1|HUU91324 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-100B4  ~complete genomic
              sequence, complete sequence
          Length = 174826

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    tgaggattgatgccctttgt 127
              ||||||||||||||||||||
Sbjct: 172802 tgaggattgatgccctttgt 172783
to top
>ref|XM_547563.2| PREDICTED: Canis familiaris similar to Small conductance
            calcium-activated potassium channel protein 3 (SK3)
            (SKCa3) (LOC490441), mRNA
          Length = 2130

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 555  ctcaacaagatcaacttcaa 574
            ||||||||||||||||||||
Sbjct: 1258 ctcaacaagatcaacttcaa 1277
to top
>emb|AL691420.13| Human DNA sequence from clone RP11-352C6 on chromosome 9, complete
             sequence
          Length = 175726

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   ctgttgcttctttagccaaa 399
             ||||||||||||||||||||
Sbjct: 20964 ctgttgcttctttagccaaa 20945
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>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 272    tggtcgctccgatgatggtgctgg 295
              ||||||| ||||||||||||||||
Sbjct: 409609 tggtcgcgccgatgatggtgctgg 409632
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>ref|XM_788557.1| PREDICTED: Strongylocentrotus purpuratus similar to sushi, von
            Willebrand factor type A, EGF and pentraxin domain
            containing 1 (LOC588893), mRNA
          Length = 5160

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 454  gcattggcagagttagcatc 473
            ||||||||||||||||||||
Sbjct: 4955 gcattggcagagttagcatc 4936
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 317     cgaagccaagggcaagctgg 336
               ||||||||||||||||||||
Sbjct: 1874908 cgaagccaagggcaagctgg 1874927
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>gb|AC090150.9| Homo sapiens chromosome 8, clone RP11-521M14, complete sequence
          Length = 210629

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    ggcaagctggacaggtgtta 346
              ||||||||||||||||||||
Sbjct: 170753 ggcaagctggacaggtgtta 170734
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>gb|AC112217.2| Homo sapiens chromosome 3 clone CTD-2028L5, complete sequence
          Length = 156545

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   aaagaaacaaagcaatgtgt 51
            ||||||||||||||||||||
Sbjct: 7265 aaagaaacaaagcaatgtgt 7246
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>gb|AC099054.2| Homo sapiens chromosome 3 clone RP11-489C3, complete sequence
          Length = 201564

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    aaagaaacaaagcaatgtgt 51
             ||||||||||||||||||||
Sbjct: 54440 aaagaaacaaagcaatgtgt 54459
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>gb|AC124649.6| Homo sapiens chromosome 8, clone RP11-23I8, complete sequence
          Length = 191004

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   ggcaagctggacaggtgtta 346
             ||||||||||||||||||||
Sbjct: 57405 ggcaagctggacaggtgtta 57386
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 15      ttgggaaatatcagttgaaagaaa 38
               ||||||||||| ||||||||||||
Sbjct: 1764894 ttgggaaatattagttgaaagaaa 1764917
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>dbj|AK082700.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:C230090H11
           product:unclassifiable, full insert sequence
          Length = 4133

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  aaagcaatgtgtaataaaca 59
           ||||||||||||||||||||
Sbjct: 869 aaagcaatgtgtaataaaca 850
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>gb|AC107387.6| Homo sapiens BAC clone RP11-321I11 from 2, complete sequence
          Length = 105842

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 8    tacacatttgggaaatatca 27
            ||||||||||||||||||||
Sbjct: 7650 tacacatttgggaaatatca 7669
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>gb|AC006062.5| Homo sapiens X BAC GS1-199J3 (Genome Systems Human BAC Library)
             complete sequence
          Length = 122681

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 623   ttggaagtcccttgaagttt 642
             ||||||||||||||||||||
Sbjct: 71847 ttggaagtcccttgaagttt 71866
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>gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4,
             complete sequence
          Length = 413138

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 165   gtctttgtatttcttgaaaagaatctcaatgt 196
             ||||||| |||| ||||||||||| |||||||
Sbjct: 22534 gtctttggatttgttgaaaagaatttcaatgt 22565
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>gb|AC073533.19| Homo sapiens X BAC RP11-589J20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 182056

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 623    ttggaagtcccttgaagttt 642
              ||||||||||||||||||||
Sbjct: 147383 ttggaagtcccttgaagttt 147364
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>dbj|AP006255.1| Homo sapiens genomic DNA, chromosome 9, clone:RP11-361G14, complete
             sequence
          Length = 189176

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   ctgttgcttctttagccaaa 399
             ||||||||||||||||||||
Sbjct: 49560 ctgttgcttctttagccaaa 49541
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>emb|AL808114.11| Mouse DNA sequence from clone RP23-146A17 on chromosome 4, complete
             sequence
          Length = 41153

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 425   ccgggaagagattcagcctgctcc 448
             ||||||||||| ||||||||||||
Sbjct: 10812 ccgggaagagactcagcctgctcc 10835
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>emb|AL731839.13| Mouse DNA sequence from clone RP23-76O22 on chromosome X, complete
              sequence
          Length = 228355

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 514    taggcaagcagcccaatatt 533
              ||||||||||||||||||||
Sbjct: 165235 taggcaagcagcccaatatt 165254
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>dbj|AB020871.1| Homo sapiens genomic DNA of 9q32 anti-oncogene of flat epitherium
             cancer , segment 3/10
          Length = 100000

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   ctgttgcttctttagccaaa 399
             ||||||||||||||||||||
Sbjct: 70780 ctgttgcttctttagccaaa 70761


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,856,190
Number of Sequences: 3902068
Number of extensions: 5856190
Number of successful extensions: 121436
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121095
Number of HSP's gapped (non-prelim): 336
length of query: 671
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 648
effective length of database: 17,143,297,704
effective search space: 11108856912192
effective search space used: 11108856912192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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