Clone Information

BLAST Search Result

Clone Name	rbags13k09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	82	2e-15
2	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	80	5e-15
3	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	76	7e-14
4	AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as...	66	9e-11
5	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	62	1e-09
6	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	51	2e-06
7	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	50	5e-06
8	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	48	2e-05
9	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	47	3e-05
10	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	47	4e-05
11	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	47	4e-05
12	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	47	4e-05
13	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	47	6e-05
14	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	47	6e-05
15	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	45	2e-04
16	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	44	4e-04
17	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	44	4e-04
18	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	44	5e-04
19	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	42	0.001
20	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	42	0.001
21	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	42	0.001
22	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	42	0.002
23	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	40	0.007
24	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	39	0.009
25	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	39	0.016
26	FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2...	38	0.027
27	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	37	0.035
28	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	37	0.035
29	FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2...	37	0.046
30	UL61_HCMVA (P16818) Hypothetical protein UL61	36	0.078
31	CHD6_HUMAN (Q8TD26) Chromodomain-helicase-DNA-binding protein 6 ...	35	0.23
32	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	33	0.51
33	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	33	0.51
34	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	33	0.51
35	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	33	0.51
36	DPO3A_MYCTU (P63977) DNA polymerase III alpha subunit (EC 2.7.7.7)	33	0.51
37	DPO3A_MYCBO (P63978) DNA polymerase III alpha subunit (EC 2.7.7.7)	33	0.51
38	ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (EC 3...	33	0.51
39	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	33	0.87
40	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	33	0.87
41	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	33	0.87
42	YQFW_BACSU (P54480) Putative nucleotidase yqfW (EC 3.1.3.-)	32	1.1
43	HCN1_HUMAN (O60741) Potassium/sodium hyperpolarization-activated...	32	1.5
44	FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.2...	32	1.9
45	COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor	31	2.5
46	COCA1_RAT (P70560) Collagen alpha-1(XII) chain (Fragment)	31	2.5
47	VRK2_MOUSE (Q8BN21) Serine/threonine-protein kinase VRK2 (EC 2.7...	31	3.3
48	ASIP_CANFA (Q5UK76) Agouti signaling protein precursor (ASP) (Ag...	31	3.3
49	SETB1_HUMAN (Q15047) Histone-lysine N-methyltransferase, H3 lysi...	31	3.3
50	MRE11_ARATH (Q9XGM2) Double-strand break repair protein MRE11	30	4.3
51	HCN1_RABIT (Q9MZS1) Potassium/sodium hyperpolarization-activated...	30	4.3
52	CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor	30	5.6
53	SETB1_MOUSE (O88974) Histone-lysine N-methyltransferase, H3 lysi...	30	5.6
54	VGLE_PRVRI (P08354) Glycoprotein GI precursor	30	5.6
55	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	30	5.6
56	RBP1_RAT (Q62796) RalA-binding protein 1 (RalBP1) (Ral-interacti...	30	5.6
57	F112A_BOVIN (Q3T026) Protein FAM112A	30	7.3
58	CAD23_HUMAN (Q9H251) Cadherin-23 precursor (Otocadherin)	30	7.3
59	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	30	7.3
60	GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3)	30	7.3
61	RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase	29	9.6
62	V70K_OYMV (P20130) 66 kDa protein	29	9.6
63	YYBT_BACSU (P37484) Hypothetical protein yybT	29	9.6
64	TGM1_RAT (P23606) Protein-glutamine gamma-glutamyltransferase K ...	29	9.6
65	BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc...	29	9.6
66	BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-assoc...	29	9.6
67	IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2	29	9.6
68	BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associa...	29	9.6

>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 49/94 (52%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           KPYS  TA +ID EVR  +  AYKRTV LLTEKK  V  +A LLLEKEVL ++D+  +LG
Sbjct: 687 KPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLG 746

Query: 431 DRPFKAAELTNYDLFKQ--GFQDEEGKTAEPTKD 336
            RPF  AE + Y+ F +  G  DE+    E  KD
Sbjct: 747 PRPF--AEKSTYEEFVEGTGSLDEDTSLPEGLKD 778

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>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 80.1 bits (196), Expect = 5e-15
 Identities = 46/97 (47%), Positives = 62/97 (63%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           KPYS  TA +ID EVR  ++ AY+RTV LLTEKK  V  +A LLLEKEVL ++D+ ++LG
Sbjct: 686 KPYSEATARMIDDEVRILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMVQLLG 745

Query: 431 DRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVPD 321
            RPF   E + Y+ F +G       T    +DT +P+
Sbjct: 746 PRPF--TEKSTYEEFVEG-------TGSLDEDTSLPE 773

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>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 76.3 bits (186), Expect = 7e-14
 Identities = 43/89 (48%), Positives = 56/89 (62%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           KPYS  TA +ID EVR  V  AY RT++LLT+ +EQV  +   LLEKEVL + D+  +LG
Sbjct: 553 KPYSEATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIELLG 612

Query: 431 DRPFKAAELTNYDLFKQGFQDEEGKTAEP 345
            RPF  AE + Y+ F +G    E  T+ P
Sbjct: 613 PRPF--AEKSTYEEFVEGTGSLEEDTSLP 639

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>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score = 65.9 bits (159), Expect = 9e-11
 Identities = 37/98 (37%), Positives = 58/98 (59%)
 Frame = -3

Query: 614 NKPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL 435
           NKP+SN+TA  ID EV+  V  A++   +LLT+  ++V L+A+ LL KE + ++D+ R+L
Sbjct: 670 NKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRLL 729

Query: 434 GDRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVPD 321
           G RPFK           + F+    K  +P  +TE P+
Sbjct: 730 GPRPFKER--------NEAFE----KYLDPKSNTEPPE 755

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>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
            RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
 Frame = -3

Query: 611  KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
            KP+S++T  IID+EV   V + + R   LL EK E V  IA++LL+KEVL ++D+  +LG
Sbjct: 725  KPFSDETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDLLG 784

Query: 431  DRPFKAAE------LTNYDLFKQGFQDEEG-KTAEPTKDT 333
             RPF          L +Y+  K   ++E+  K  EP   T
Sbjct: 785  KRPFPERNDAFDKYLNDYETEKIRKEEEKNEKRNEPKPST 824

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>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 26/96 (27%), Positives = 53/96 (55%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           +P+S     ++D E R  VAKAY+ T  +L +  +++  +A  LLEKEV++ +D+  ++G
Sbjct: 689 RPFSQGLQQMMDHEARLLVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEALIG 748

Query: 431 DRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVP 324
             P    ++     +    ++++    E T++T+ P
Sbjct: 749 PPPHGPKKMIAPQRWIDAQREKQDLGEEETEETQQP 784

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>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 25/61 (40%), Positives = 38/61 (62%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           K YS  TA I+D EVRE V KAYKR  +++T   + +  +A+LL+EKE +  ++   +  
Sbjct: 648 KDYSMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFI 707

Query: 431 D 429
           D
Sbjct: 708 D 708

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>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 24/60 (40%), Positives = 37/60 (61%)
 Frame = -3

Query: 596 QTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFK 417
           QTA +ID E+   + ++YKR   +L  KK++  L+AE LLE E L  D++ RV+  +  K
Sbjct: 584 QTAELIDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEYETLSADEVKRVISGQKIK 643

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>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 24/59 (40%), Positives = 35/59 (59%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL 435
           + YS  T   +D EV   +A+ Y+  V LLTEKKE +  IA  LLE+E + +D+   V+
Sbjct: 520 REYSECTQQYVDEEVARVLAERYRAVVALLTEKKELLEYIATRLLERETIERDEFEEVI 578

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>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 22/61 (36%), Positives = 38/61 (62%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           K YS  TA ++D EVRE V +AY+R  +++T   + +  +A+LL+EKE +  ++   +  
Sbjct: 639 KDYSMATADVVDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFI 698

Query: 431 D 429
           D
Sbjct: 699 D 699

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>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 24/70 (34%), Positives = 44/70 (62%)
 Frame = -3

Query: 614 NKPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL 435
           ++ +S++TA+ ID EV + V +AY+R   +L E +  +  +AE+L+EKE +  ++L  +L
Sbjct: 546 DRDFSDETAAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLL 605

Query: 434 GDRPFKAAEL 405
            +   K A L
Sbjct: 606 ANNNAKLALL 615

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>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 23/61 (37%), Positives = 38/61 (62%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           K YS  TA ++D EVRE V KAY R  +++T + + +  +A+LL+EKE +  ++   +  
Sbjct: 636 KDYSMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLFI 695

Query: 431 D 429
           D
Sbjct: 696 D 696

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>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 27/73 (36%), Positives = 42/73 (57%)
 Frame = -3

Query: 605 YSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDR 426
           YS++ A  ID EVR+ +  A+    ++LTE ++ +  +A  LLEKE LH+ +L  +  D 
Sbjct: 546 YSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADV 605

Query: 425 PFKAAELTNYDLF 387
             K   LT +D F
Sbjct: 606 E-KRPRLTMFDDF 617

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>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 27/73 (36%), Positives = 42/73 (57%)
 Frame = -3

Query: 605 YSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDR 426
           YS++ A  ID EVR+ +  A+    ++LTE ++ +  +A  LLEKE LH+ +L  +  D 
Sbjct: 546 YSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADV 605

Query: 425 PFKAAELTNYDLF 387
             K   LT +D F
Sbjct: 606 E-KRPRLTMFDDF 617

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>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 23/61 (37%), Positives = 36/61 (59%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           K YS  TA I+D EVRE V KAY+R   ++    + +  +A+LL+EKE +  ++   +  
Sbjct: 638 KDYSMATADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSLFI 697

Query: 431 D 429
           D
Sbjct: 698 D 698

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>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 21/47 (44%), Positives = 32/47 (68%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEK 471
           K YS  TA ++D+EVRE V KAY+R   ++T   + +  +A+LL+EK
Sbjct: 616 KDYSMATADVVDSEVRELVEKAYERAKQIITTHIDILHKLAQLLIEK 662

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>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 26/73 (35%), Positives = 41/73 (56%)
 Frame = -3

Query: 605 YSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDR 426
           YS++ A  ID EVR+ +  A+    ++LTE ++ +  +A  LLEKE LH+ +L  +    
Sbjct: 546 YSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELEGIFASV 605

Query: 425 PFKAAELTNYDLF 387
             K   LT +D F
Sbjct: 606 E-KRPRLTMFDDF 617

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>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
 Frame = -3

Query: 614 NKPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL 435
           N   S  TA +ID EV+  + + Y+   D+LT+  +Q+  +A  L+E E L    +  +L
Sbjct: 534 NNETSEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNLL 593

Query: 434 GDRPFKAAELTNYDLFKQG-FQDEEGKTAEPTKDTEVPDDD 315
             R   + E   +        + ++ K+ E TK T+   ++
Sbjct: 594 SGRALDSEEENKFPFNDSSTIKIDKEKSPEKTKTTKAKKEN 634

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>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 21/57 (36%), Positives = 36/57 (63%)
 Frame = -3

Query: 602 SNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           S+ TA  ID EV+E V + + + + +L   ++ +  IAE +LEKEV+  ++L  +LG
Sbjct: 562 SDDTAKEIDLEVKEIVEQGHNQALAILEHNRDLLEAIAEKILEKEVIEGEELHHLLG 618

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>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 19/57 (33%), Positives = 36/57 (63%)
 Frame = -3

Query: 605 YSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL 435
           YS+Q A  ID E++  + + Y+R   +LTE ++++ LIA+ LL+ E L  + +  ++
Sbjct: 545 YSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLI 601

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>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL- 435
           K YS  TA +ID EVR  + +AY R  + +   +EQ   IAE LL+ E L    +  +  
Sbjct: 574 KTYSEATAVMIDDEVRRILGEAYDRAKEAIETHREQHKAIAEALLKYETLDAKQIMSLFK 633

Query: 434 -GDRPFK--AAELTNYDLFKQGFQD 369
            G  P +  AAE+     F++  +D
Sbjct: 634 TGKMPDEAAAAEVPEPKTFEESLKD 658

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>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 18/59 (30%), Positives = 34/59 (57%)
 Frame = -3

Query: 605 YSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGD 429
           YS   AS ID +VR  +   +  TV ++ + +  +  + +LL+EKE +  D+  +++GD
Sbjct: 556 YSEDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIVGD 614

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>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = -3

Query: 602 SNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRP 423
           S  TA +ID EV+  + + Y+   D+LT+  +Q+  +A  L+E E L    +  +L  R 
Sbjct: 538 SEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNLLSGRA 597

Query: 422 FKAAE 408
             + E
Sbjct: 598 LDSEE 602

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>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 17/57 (29%), Positives = 33/57 (57%)
 Frame = -3

Query: 605 YSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL 435
           Y+   A  ID EVR+ +   Y++ ++++ + +  + LI E LL+KE +  D+   +L
Sbjct: 570 YAENIADRIDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDEFRELL 626

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>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score = 38.5 bits (88), Expect = 0.016
 Identities = 19/70 (27%), Positives = 40/70 (57%)
 Frame = -3

Query: 605 YSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDR 426
           YS++ A+ ID +VRE V++ YK    ++ + +  +  + +LL+EKE +  ++   ++  +
Sbjct: 556 YSDEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEFRHIV--K 613

Query: 425 PFKAAELTNY 396
            + A    NY
Sbjct: 614 EYTAIPEKNY 623

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>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           K +S QTA  ID E+   + + YK+   ++   ++++ L+ E LL  E + + D+   + 
Sbjct: 606 KLFSEQTAKDIDFEINAIIEEQYKKARTIIKTNRKELELLVEALLIAETILKSDID-YIH 664

Query: 431 DRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTE 330
           +      E+      +Q  Q  E K A+  K TE
Sbjct: 665 EHTKLPPEILAQKQEQQAKQKAEAKEAKLNKKTE 698

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>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDL----- 447
           K  S QTA  ID EVR  + +A  +  +++   +E   LIAE LL+ E L    +     
Sbjct: 565 KSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYE 624

Query: 446 TRVLGDRPFKAAELTNYDLFKQGFQDEE 363
           T  + +   + +   +YD  K    DE+
Sbjct: 625 TGKMPEAVEEESHALSYDEVKSKMNDEK 652

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>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDL----- 447
           K  S QTA  ID EVR  + +A  +  +++   +E   LIAE LL+ E L    +     
Sbjct: 565 KSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYE 624

Query: 446 TRVLGDRPFKAAELTNYDLFKQGFQDEE 363
           T  + +   + +   +YD  K    DE+
Sbjct: 625 TGKMPEAVEEESHALSYDEVKSKMNDEK 652

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>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score = 37.0 bits (84), Expect = 0.046
 Identities = 17/55 (30%), Positives = 31/55 (56%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDL 447
           K YS QTA  ID E+   + + YK+   ++   ++++ L+ E LL  E + + D+
Sbjct: 609 KLYSEQTAKDIDNEINFIIEEQYKKAKTIIKSNRKELELLVEALLIAETILKSDI 663

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>UL61_HCMVA (P16818) Hypothetical protein UL61|
          Length = 431

 Score = 36.2 bits (82), Expect = 0.078
 Identities = 30/82 (36%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
 Frame = -2

Query: 558 GCQGLQKNS*PVNGEEGTSSSYRGV--AAREGGPPPGRSDQGIRRPPLQGSRA---NKL* 394
           G +G  +   PV+   G   S R    AAR+ GP PG    G  +PPL   RA   N+  
Sbjct: 229 GGRGRARTPGPVHSAAGGPGSRRRSPGAARDPGPEPGEERGGGGKPPLGSPRATDGNR-- 286

Query: 393 PLQAGVPGRRGQDRRAHQGHRG 328
              AGVP R G+      G RG
Sbjct: 287 DPGAGVPARPGRRMGGSSGGRG 308

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>CHD6_HUMAN (Q8TD26) Chromodomain-helicase-DNA-binding protein 6 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD6) (CHD-6) (Radiation-induced
            gene B protein)
          Length = 2715

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +1

Query: 22   KTFGDANTSSEHEPRPAAHRTEQQGQASCGKPSASLPANK 141
            KT GD N +S  EP P+  R E  G  +C +PSA LPA +
Sbjct: 2659 KTKGD-NPNSHPEPAPSCER-EPSGDENCAEPSAPLPAER 2696

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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           K  S++TA IID EV+  + + Y R   LLT+  + +  + + L++ E +    +  ++ 
Sbjct: 535 KHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMA 594

Query: 431 DR 426
            R
Sbjct: 595 RR 596

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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           K  S++TA IID EV+  + + Y R   LLT+  + +  + + L++ E +    +  ++ 
Sbjct: 535 KHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMA 594

Query: 431 DR 426
            R
Sbjct: 595 RR 596

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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           K  S++TA IID EV+  + + Y R   LLT+  + +  + + L++ E +    +  ++ 
Sbjct: 535 KHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMA 594

Query: 431 DR 426
            R
Sbjct: 595 RR 596

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>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 18/74 (24%), Positives = 39/74 (52%)
 Frame = -3

Query: 614 NKPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL 435
           +K  S++TA IID EV+  V K Y R   +L E  + +  + + L++ E ++   +  ++
Sbjct: 534 SKHMSDETARIIDEEVKLLVEKNYNRAKKILEENLDILHAMKDALIKYETINSRQIDDLM 593

Query: 434 GDRPFKAAELTNYD 393
             +  +++ +   D
Sbjct: 594 KRKSIQSSNICTDD 607

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>DPO3A_MYCTU (P63977) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 1184

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = -3

Query: 467  VLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVPDDD 315
            ++H D +  VLG +  KA  L  +DLF  G  D+   TA+P    +VPDD+
Sbjct: 926  LVHSDAVDSVLGTK--KAEALGQFDLF--GSNDDGTGTADPVFTIKVPDDE 972

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>DPO3A_MYCBO (P63978) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 1184

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = -3

Query: 467  VLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVPDDD 315
            ++H D +  VLG +  KA  L  +DLF  G  D+   TA+P    +VPDD+
Sbjct: 926  LVHSDAVDSVLGTK--KAEALGQFDLF--GSNDDGTGTADPVFTIKVPDDE 972

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>ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (EC 3.6.1.-)|
           (ATP-dependent helicase XNP) (X-linked nuclear protein)
           (dXNP) (d-xnp)
          Length = 1311

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1

Query: 391 SSSRGSRTKRARPQSPPRTPRCLMTMDRLCSP 296
           SS R SR   +R +SPPR  RC++ + R+  P
Sbjct: 224 SSERSSRASSSRAESPPRPKRCVVRLKRVSLP 255

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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 16/62 (25%), Positives = 33/62 (53%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           K  S++TA IID EV+  + + Y R   +LT+  + +  + + L++ E +    +  ++ 
Sbjct: 535 KHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDDLMA 594

Query: 431 DR 426
            R
Sbjct: 595 RR 596

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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 16/62 (25%), Positives = 33/62 (53%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLG 432
           K  S++TA IID EV+  + + Y R   +LT+  + +  + + L++ E +    +  ++ 
Sbjct: 535 KHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDDLMA 594

Query: 431 DR 426
            R
Sbjct: 595 RR 596

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>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -3

Query: 605 YSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL-GD 429
           +SN+   I D EV E +  + +R   LLT+K  ++  +A+ L+E E L   ++ +V  G+
Sbjct: 651 WSNKIRDIADNEVIELLKDSEERARRLLTKKNVELHRLAQGLIEYETLDAHEIEQVCKGE 710

Query: 428 RPFKAAELTN 399
           +  K    TN
Sbjct: 711 KLDKLKTSTN 720

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>YQFW_BACSU (P54480) Putative nucleotidase yqfW (EC 3.1.3.-)|
          Length = 193

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
 Frame = -3

Query: 605 YSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELL---------LEKEVLHQD 453
           + NQ  +II  E    +A+  K+++DLL E+ + + + A             +++ +H D
Sbjct: 54  WMNQNEAIIYKEAL--LAQHAKQSLDLLKEEHKLIYITARRTHLTDITYEWFDRQNIHYD 111

Query: 452 DLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVP 324
            +  V G    +A +  N DLF   F+D  G      K+  +P
Sbjct: 112 HIELVGGHHKVEAVKNHNIDLF---FEDHHGNAMMIAKEAGIP 151

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>HCN1_HUMAN (O60741) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 1 (Brain cyclic nucleotide
           gated channel 1) (BCNG-1)
          Length = 890

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -1

Query: 427 APSRQPS*QTMTS-SSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHS 251
           AP   P   T+ S SS  + T R R QSPP      ++   L SP+ S +   P+  L  
Sbjct: 637 APINYPQMTTLNSTSSTTTPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSP 696

Query: 250 CTW 242
           C++
Sbjct: 697 CSY 699

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>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 12/62 (19%), Positives = 35/62 (56%)
 Frame = -3

Query: 614 NKPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVL 435
           ++ +S +TA  +D  ++  + + YK     L++ +E + ++ + L +KEV+  + +  ++
Sbjct: 552 SREFSEKTAEEMDLFIKNLLEERYKHVKQTLSDYREAIEIMVKELFDKEVITGERVREII 611

Query: 434 GD 429
            +
Sbjct: 612 SE 613

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>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor|
          Length = 674

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = -2

Query: 525 VNGEEGTSSSYRGVAAREG--GPPPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQ 358
           + G++G     RG A   G  GPP  +  +GI +P   G       P Q G+PG +GQ
Sbjct: 233 LKGDQGVPGE-RGAAGPSGPQGPPGEQGPEGIGKPGAPGI------PGQPGIPGMKGQ 283

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>COCA1_RAT (P70560) Collagen alpha-1(XII) chain (Fragment)|
          Length = 317

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -2

Query: 489 GVAAREGGPPPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQDRRAHQGHRG 328
           G A   G P PG +     RP +QG       P + G+PG +G+     QG RG
Sbjct: 150 GAAGARGEPGPGGAPGFPGRPGVQGP------PGERGLPGEKGERGIGSQGPRG 197

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>VRK2_MOUSE (Q8BN21) Serine/threonine-protein kinase VRK2 (EC 2.7.11.1)|
           (Vaccinia-related kinase 2)
          Length = 503

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
 Frame = -1

Query: 403 QTMTSSSRGSRTKR--------ARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHSC 248
           Q+  ++   SRT++        +  QS  +TP  +      C P   C RR+P R+  S 
Sbjct: 384 QSRPAAPENSRTRKIHEYSDIFSEMQSLQQTPSYMSFQGSYCKPYLDCTRRDPIRKPRSL 443

Query: 247 TWHAHHP 227
             + H P
Sbjct: 444 PRYRHTP 450

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>ASIP_CANFA (Q5UK76) Agouti signaling protein precursor (ASP) (Agouti switch|
           protein)
          Length = 131

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -1

Query: 421 SRQPS*QTMTSSSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSC 284
           SR+ + +  +S  + S    ARP+ PP TP C+ T +   SP  +C
Sbjct: 62  SRKEAEKKRSSKKKASMKNVARPRPPPPTP-CVATRNSCKSPAPAC 106

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>SETB1_HUMAN (Q15047) Histone-lysine N-methyltransferase, H3 lysine-9 specific 4|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 4)
           (H3-K9-HMTase 4) (SET domain bifurcated 1)
           (ERG-associated protein with SET domain) (ESET)
          Length = 1291

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
 Frame = -3

Query: 572 EVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKE--VLHQDDLTRVLGDRPFKAAELTN 399
           E+R ++ +  ++ +D + ++K+Q+A +   +++KE  V H D L             L  
Sbjct: 39  ELRHFIDEELEK-MDCVQQRKKQLAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVK 97

Query: 398 YDLFKQGFQ----DEEGKTAEPTKDTEVPDDD 315
               K G Q      E +++ PT+  E+PD+D
Sbjct: 98  DFYSKLGLQYRDSSSEDESSRPTEIIEIPDED 129

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>MRE11_ARATH (Q9XGM2) Double-strand break repair protein MRE11|
          Length = 720

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = -3

Query: 500 ALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVPD 321
           AL+AE  L+ E+L  +DL   L +   K  +L  Y   +   Q+  GK A+ +   +  +
Sbjct: 428 ALVAESNLKMEILPVNDLDVALHNFVNKDDKLAFYSCVQYNLQETRGKLAKDSDAKKFEE 487

Query: 320 DD 315
           DD
Sbjct: 488 DD 489

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>HCN1_RABIT (Q9MZS1) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 1 (rbHCN1)
          Length = 822

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -1

Query: 427 APSRQPS*QTMTS-SSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHS 251
           AP   P    + S SS  + T R R QSPP      ++   L SP+ S +   P+  L  
Sbjct: 573 APISYPQMTALNSTSSTATPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSP 632

Query: 250 CTW 242
           C++
Sbjct: 633 CSY 635

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>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor|
          Length = 1775

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
 Frame = -2

Query: 567 EGMGCQGLQKNS*PVN--GEEGTS--SSYRGVAAREGGP-PPG----RSDQGIRRPPLQG 415
           +G G  G   N  P    GE+GT+  +  +G     G P PPG    + D G+    +QG
Sbjct: 437 DGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLPGYGIQG 496

Query: 414 SRANKL*PLQAGVPGRRGQDRRAHQGHRGA 325
           S+ +   P   G+ G +G+  R  +G+ GA
Sbjct: 497 SKGDAGIPGYPGLKGSKGE--RGFKGNAGA 524

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>SETB1_MOUSE (O88974) Histone-lysine N-methyltransferase, H3 lysine-9 specific 4|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 4)
           (H3-K9-HMTase 4) (SET domain bifurcated 1)
           (ERG-associated protein with SET domain) (ESET)
          Length = 1307

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
 Frame = -3

Query: 572 EVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAA--ELTN 399
           E+R+++ +  ++ +D + ++K+Q+A +   +L+KE     ++  V  DR F  A  E+TN
Sbjct: 39  ELRQYIDEELEK-MDCIQQRKKQLAELETWVLQKE----SEVAYV--DRLFDDASREVTN 91

Query: 398 YDLFKQGFQDE----------EGKTAEPTKDTEVPDDD 315
            +   + F  +          E + + PT+  E+PD+D
Sbjct: 92  CESLVKDFYSKLGLQYHDSSSEDEASRPTEIIEIPDED 129

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>VGLE_PRVRI (P08354) Glycoprotein GI precursor|
          Length = 577

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 343 PRTPRCLMTMDRLCSPTSSCRRRNPARRLH-SCT 245
           PR P CL  +D  CS TS  R    ARR + SC+
Sbjct: 287 PRAPECLRPVDPACSFTSPARAALVARRAYASCS 320

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>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 13/59 (22%), Positives = 31/59 (52%)
 Frame = -3

Query: 602 SNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQDDLTRVLGDR 426
           S +  + +D EVR  +   Y +   +L++ ++ +  +   L+EKE +   +  R++ +R
Sbjct: 555 SEEMVAKVDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKETIEAKEFMRIVEER 613

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>RBP1_RAT (Q62796) RalA-binding protein 1 (RalBP1) (Ral-interacting protein|
           1) (Cytocentrin) (Dinitrophenyl S-glutathione ATPase)
           (DNP-SG ATPase)
          Length = 646

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 22/75 (29%), Positives = 38/75 (50%)
 Frame = -3

Query: 521 TEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPT 342
           ++KKE+   I E    KE  H+++  +    +  K  + T  D+ KQ    E+ K  +PT
Sbjct: 117 SKKKEKDFKIKEK--PKEEKHKEEKHKEEKHKEKKCKDFTAADVVKQW--KEKKKKKKPT 172

Query: 341 KDTEVPDDDGSAVLP 297
           ++ EVP  D  ++ P
Sbjct: 173 QEPEVPQTDAPSLRP 187

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>F112A_BOVIN (Q3T026) Protein FAM112A|
          Length = 169

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -1

Query: 343 PRTPRCLMTMDRLCSPTSSCRRRNP--ARRLHSCTWHAHHPI 224
           P  P   + + R     +SCRR+NP  A+++ SC ++A H +
Sbjct: 10  PYNPHHRIPLSRFQYHLASCRRKNPKKAKKMASCKYNACHVV 51

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>CAD23_HUMAN (Q9H251) Cadherin-23 precursor (Otocadherin)|
          Length = 3354

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 140  NKTGMTDLDEGADLYSFYFLCCNNKTRIYRMMSMPCTAV 256
            N TG  D DEG +   +YF+   N+ + + +    C  V
Sbjct: 2749 NVTGAVDADEGPNAIVYYFIAAGNEEKNFHLQPDGCLLV 2787

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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 611 KPYSNQTASIIDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQ---DDLTR 441
           K  S++TA IID EV+  +   Y R  ++L E  + +  + E L++ E +     DDL +
Sbjct: 535 KHMSDETARIIDEEVKLLIEINYSRARNILNENIDILHAMKEALIKYETIDAFQIDDLMK 594

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>GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 815

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = -1

Query: 373 RTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHSCTWHAHH 230
           RT    P+S   TP  +    R CS T SCRRR+      SC   A H
Sbjct: 664 RTPSTTPRSWCSTPTRMEPCGRRCSTTPSCRRRS----TWSCRLCAEH 707

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>RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase|
          Length = 882

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = -3

Query: 581 IDTEVREWVAKAYKRTVDLLTEKKEQVALIAELLLEKEVLHQ--DDLTRVLGDRPFKAAE 408
           +D+++RE + + YKR + LL  KKE      E+   KE L    ++L  V  D      +
Sbjct: 593 LDSKLRE-LEEIYKRYLTLLNSKKELEITQREIAKAKETLEMSFEELAEVEADIERIEKK 651

Query: 407 LTNYDLFKQGFQDEEGKTAEPTKD 336
           L+     KQ + +EE K     K+
Sbjct: 652 LSQ---LKQKYNEEEYKKKREEKE 672

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>V70K_OYMV (P20130) 66 kDa protein|
          Length = 597

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
 Frame = -1

Query: 388 SSRGSRTKRARPQSPPRTPRC--LMTMDRLCSPTSSCRRRNPARRLHSCTWHAHHPIDS 218
           SS   R    RP SPP+            LCS  S CR+  P  R +       HP+ S
Sbjct: 172 SSCSPRKLLHRPLSPPKPLHLHNFRQHSSLCSRRSPCRKLRPTPRCNQLAQAQQHPLPS 230

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>YYBT_BACSU (P37484) Hypothetical protein yybT|
          Length = 659

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = +2

Query: 2   EKYRIRQKRLVTPIQAQSMNHDQQLIVLNNRARPAAESLVHPFQLINK 145
           +KY     R +TP +A  +++D  L+V+ +  +P   SLV   +L+NK
Sbjct: 391 KKYEELWSRFITPEEAMEISNDDTLLVIVDTHKP---SLVMEERLVNK 435

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>TGM1_RAT (P23606) Protein-glutamine gamma-glutamyltransferase K (EC|
           2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K))
           (Transglutaminase-1) (Epidermal TGase)
          Length = 824

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = -2

Query: 519 GEEGTSSSYRGVAAR----EGGPPPGRSDQGIRRPPLQGSRAN 403
           G E + S  RG ++R     GG   GR  +G RRP  +GS  N
Sbjct: 64  GPEPSGSRSRGTSSRGGGSRGGDSRGRDSRGGRRPESRGSGVN 106

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>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 525  VNGEEGTSSSYRGVAAREGGPPPGR--SDQGIRRPPLQGSRANKL*PLQAGVPGRR 364
            + G E      RGV +   GPPP R  S    R  P  GS    + P + G P RR
Sbjct: 893  LTGPEAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRR 948

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>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 525  VNGEEGTSSSYRGVAAREGGPPPGR--SDQGIRRPPLQGSRANKL*PLQAGVPGRR 364
            + G E      RGV +   GPPP R  S    R  P  GS    + P + G P RR
Sbjct: 896  LTGPEAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRR 951

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>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2|
          Length = 954

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -2

Query: 480 AREGGPPPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQDRRAHQG 337
           AR G P PGR  Q   R   + +R  +    Q+    RR  DRR +QG
Sbjct: 113 ARPGMPTPGRHGQNDNRENGRDNREGRENGRQSRPNDRRNNDRRNNQG 160

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>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2161

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 525  VNGEEGTSSSYRGVAAREGGPPPGRSDQ--GIRRPPLQGSRANKL*PLQAGVPGRR 364
            ++G E      RGV     GPPP R +     R  P  GS    + P   GVP RR
Sbjct: 897  LSGPEAGRKPARGVGGGGQGPPPPRRENRTETRWGPRPGSCRRGIPPEDPGVPPRR 952


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,257,930
Number of Sequences: 219361
Number of extensions: 1818505
Number of successful extensions: 6104
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 5603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6081
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result