>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02,
             complete sequence
          Length = 131860

 Score =  200 bits (101), Expect = 4e-48
 Identities = 209/245 (85%)
 Strand = Plus / Minus

                                                                         
Query: 364   tcttcgtcctggaacccctgcttgaagaggtcatagtttgttagctcggctgccttgaag 423
             ||||| ||||||||||| |||||||||||||| ||||| ||| |||||| ||||||||| 
Sbjct: 80323 tcttcatcctggaacccttgcttgaagaggtcgtagttagttggctcggatgccttgaaa 80264

                                                                         
Query: 424   gggcggtctcctaataccctggtcagatcgtcctggtggaggacctccttctcgagcagc 483
             || || ||||||||||||||   || ||||||||||||||||||||||||||| ||||||
Sbjct: 80263 ggccgttctcctaataccctaaccaaatcgtcctggtggaggacctccttctcaagcagc 80204

                                                                         
Query: 484   aactccgcgataagagctacttgttccttcttctccgttaacaggtcaactgttcttttg 543
             |  || |||||    || ||||| ||||| | ||| |||| ||| || |||||| |||||
Sbjct: 80203 atttcagcgattttggcgacttgctccttgtgctcagttatcagttccactgtttttttg 80144

                                                                         
Query: 544   taggccttggcaacccattccctcacctcagtatcgatgatggatgcagtttggttgctg 603
             || |||||| ||||||||||||||||||||   |||||||||||||| ||||||||||||
Sbjct: 80143 tacgccttgccaacccattccctcacctcatcgtcgatgatggatgctgtttggttgctg 80084

                  
Query: 604   taagg 608
             |||||
Sbjct: 80083 taagg 80079



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 33/35 (94%), Gaps = 1/35 (2%)
 Strand = Plus / Minus

                                                
Query: 194   ttcttatgctgcaacaacaaaaccagaatctatcg 228
             |||||||||||||||||| |||| |||||||||||
Sbjct: 80481 ttcttatgctgcaacaac-aaacaagaatctatcg 80448

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  200 bits (101), Expect = 4e-48
 Identities = 209/245 (85%)
 Strand = Plus / Minus

                                                                            
Query: 364      tcttcgtcctggaacccctgcttgaagaggtcatagtttgttagctcggctgccttgaag 423
                ||||| ||||||||||| |||||||||||||| ||||| ||| |||||| ||||||||| 
Sbjct: 22378688 tcttcatcctggaacccttgcttgaagaggtcgtagttagttggctcggatgccttgaaa 22378629

                                                                            
Query: 424      gggcggtctcctaataccctggtcagatcgtcctggtggaggacctccttctcgagcagc 483
                || || ||||||||||||||   || ||||||||||||||||||||||||||| ||||||
Sbjct: 22378628 ggccgttctcctaataccctaaccaaatcgtcctggtggaggacctccttctcaagcagc 22378569

                                                                            
Query: 484      aactccgcgataagagctacttgttccttcttctccgttaacaggtcaactgttcttttg 543
                |  || |||||    || ||||| ||||| | ||| |||| ||| || |||||| |||||
Sbjct: 22378568 atttcagcgattttggcgacttgctccttgtgctcagttatcagttccactgtttttttg 22378509

                                                                            
Query: 544      taggccttggcaacccattccctcacctcagtatcgatgatggatgcagtttggttgctg 603
                || |||||| ||||||||||||||||||||   |||||||||||||| ||||||||||||
Sbjct: 22378508 tacgccttgccaacccattccctcacctcatcgtcgatgatggatgctgtttggttgctg 22378449

                     
Query: 604      taagg 608
                |||||
Sbjct: 22378448 taagg 22378444



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 33/35 (94%), Gaps = 1/35 (2%)
 Strand = Plus / Minus

                                                   
Query: 194      ttcttatgctgcaacaacaaaaccagaatctatcg 228
                |||||||||||||||||| |||| |||||||||||
Sbjct: 22378846 ttcttatgctgcaacaac-aaacaagaatctatcg 22378813

>dbj|AK069936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039G20, full
            insert sequence
          Length = 2880

 Score =  200 bits (101), Expect = 4e-48
 Identities = 209/245 (85%)
 Strand = Plus / Minus

                                                                        
Query: 364  tcttcgtcctggaacccctgcttgaagaggtcatagtttgttagctcggctgccttgaag 423
            ||||| ||||||||||| |||||||||||||| ||||| ||| |||||| ||||||||| 
Sbjct: 2597 tcttcatcctggaacccttgcttgaagaggtcgtagttagttggctcggatgccttgaaa 2538

                                                                        
Query: 424  gggcggtctcctaataccctggtcagatcgtcctggtggaggacctccttctcgagcagc 483
            || || ||||||||||||||   || ||||||||||||||||||||||||||| ||||||
Sbjct: 2537 ggccgttctcctaataccctaaccaaatcgtcctggtggaggacctccttctcaagcagc 2478

                                                                        
Query: 484  aactccgcgataagagctacttgttccttcttctccgttaacaggtcaactgttcttttg 543
            |  || |||||    || ||||| ||||| | ||| |||| ||| || |||||| |||||
Sbjct: 2477 atttcagcgattttggcgacttgctccttgtgctcagttatcagttccactgtttttttg 2418

                                                                        
Query: 544  taggccttggcaacccattccctcacctcagtatcgatgatggatgcagtttggttgctg 603
            || |||||| ||||||||||||||||||||   |||||||||||||| ||||||||||||
Sbjct: 2417 tacgccttgccaacccattccctcacctcatcgtcgatgatggatgctgtttggttgctg 2358

                 
Query: 604  taagg 608
            |||||
Sbjct: 2357 taagg 2353



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 33/35 (94%), Gaps = 1/35 (2%)
 Strand = Plus / Minus

                                               
Query: 194  ttcttatgctgcaacaacaaaaccagaatctatcg 228
            |||||||||||||||||| |||| |||||||||||
Sbjct: 2755 ttcttatgctgcaacaac-aaacaagaatctatcg 2722

>gb|AY106159.1| Zea mays PCO146144 mRNA sequence
          Length = 1581

 Score =  145 bits (73), Expect = 2e-31
 Identities = 187/225 (83%)
 Strand = Plus / Minus

                                                                        
Query: 388  aagaggtcatagtttgttagctcggctgccttgaaggggcggtctcctaataccctggtc 447
            |||||||| ||||| ||| ||||   ||||||||| || || ||||||| ||||||||| 
Sbjct: 1206 aagaggtcgtagttggttggctccagtgccttgaatggacgttctcctagtaccctggtt 1147

                                                                        
Query: 448  agatcgtcctggtggaggacctccttctcgagcagcaactccgcgataagagctacttgt 507
            |||||||||||||| ||||| ||||||||||||||||| || |||||  | || ||||| 
Sbjct: 1146 agatcgtcctggtgtaggacttccttctcgagcagcaattctgcgatctgtgcaacttgc 1087

                                                                        
Query: 508  tccttcttctccgttaacaggtcaactgttcttttgtaggccttggcaacccattccctc 567
            ||||| | ||| |||| ||  ||||||||| | |||||||||||| ||||||||||||  
Sbjct: 1086 tccttgtgctctgttatcaattcaactgttttcttgtaggccttgccaacccattcccgg 1027

                                                         
Query: 568  acctcagtatcgatgatggatgcagtttggttgctgtaaggcttg 612
            ||||||   |||||||||||||| || || || ||||||||||||
Sbjct: 1026 acctcatcgtcgatgatggatgctgtctgattactgtaaggcttg 982

>ref|NM_190557.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2409

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 544  taggccttggcaacccattccctcacctcagtatcgatgatggatgc 590
            |||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 2159 taggccttagcgacccattccctcacctcagtgtcaatgatggatgc 2113



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 448  agatcgtcctggtggaggacctccttctcgagcagcaactccgcgat 494
            ||||| ||||||||||| ||||| ||||| ||||||| ||| |||||
Sbjct: 2255 agatcatcctggtggagaacctctttctcaagcagcagctcggcgat 2209

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                               
Query: 544      taggccttggcaacccattccctcacctcagtatcgatgatggatgc 590
                |||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 36176258 taggccttagcgacccattccctcacctcagtgtcaatgatggatgc 36176304



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 448      agatcgtcctggtggaggacctccttctcgagcagcaactccgcgat 494
                ||||| ||||||||||| ||||| ||||| ||||||| ||| |||||
Sbjct: 36176162 agatcatcctggtggagaacctctttctcaagcagcagctcggcgat 36176208

>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0406G08
          Length = 144233

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 544   taggccttggcaacccattccctcacctcagtatcgatgatggatgc 590
             |||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 53271 taggccttagcgacccattccctcacctcagtgtcaatgatggatgc 53317



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 448   agatcgtcctggtggaggacctccttctcgagcagcaactccgcgat 494
             ||||| ||||||||||| ||||| ||||| ||||||| ||| |||||
Sbjct: 53175 agatcatcctggtggagaacctctttctcaagcagcagctcggcgat 53221

>dbj|AK100245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056H19, full
            insert sequence
          Length = 2766

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 544  taggccttggcaacccattccctcacctcagtatcgatgatggatgc 590
            |||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 2230 taggccttagcgacccattccctcacctcagtgtcaatgatggatgc 2184



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 448  agatcgtcctggtggaggacctccttctcgagcagcaactccgcgat 494
            ||||| ||||||||||| ||||| ||||| ||||||| ||| |||||
Sbjct: 2326 agatcatcctggtggagaacctctttctcaagcagcagctcggcgat 2280

>gb|AC166316.2| Mus musculus chromosome 19, clone RP23-466L5, complete sequence
          Length = 185237

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 136   aataaataaaactggcatgactgat 160
             ||||||||||||||| |||||||||
Sbjct: 81606 aataaataaaactggtatgactgat 81630

>ref|XM_751952.1| Ustilago maydis 521 hypothetical protein (UM00898.1) partial mRNA
          Length = 2583

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 465  gacctccttctcgagcagcaactccgcga 493
            |||||||||||||||||||| || |||||
Sbjct: 2388 gacctccttctcgagcagcagctgcgcga 2360

>emb|AL034554.8|HS994L9 Human DNA sequence from clone RP5-994L9 on chromosome 20p12.3-13
            Contains STS and GSSs, complete sequence
          Length = 137739

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 584  tggatgcagtttggttgctgt 604
            |||||||||||||||||||||
Sbjct: 1878 tggatgcagtttggttgctgt 1898

>dbj|AB234511.1| Uncultured Clostridiales bacterium gene for 16S rRNA, partial
           sequence, clone: MgMjW-48
          Length = 1362

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  ggccagctgcggaaagcctag 119
           |||||||||||||||||||||
Sbjct: 195 ggccagctgcggaaagcctag 215

>gb|AC159982.4| Mus musculus chromosome 19, clone RP24-383P9, complete sequence
          Length = 198886

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 136    aataaataaaactggcatgactgat 160
              ||||||||||||||| |||||||||
Sbjct: 126510 aataaataaaactggtatgactgat 126534

>gb|AC122119.11| Mus musculus chromosome 19, clone RP24-252F4, complete sequence
          Length = 183160

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 136   aataaataaaactggcatgactgat 160
             ||||||||||||||| |||||||||
Sbjct: 86813 aataaataaaactggtatgactgat 86789

>emb|AL671875.12| Mouse DNA sequence from clone RP23-296M12 on chromosome X, complete
             sequence
          Length = 192292

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 178   tttatacagtttttacttctt 198
             |||||||||||||||||||||
Sbjct: 38870 tttatacagtttttacttctt 38890

>gb|AC118594.6| Mus musculus chromosome 1, clone RP24-479J20, complete sequence
          Length = 209825

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 382    tgcttgaagaggtcatagtttgtt 405
              |||||| |||||||||||||||||
Sbjct: 111149 tgcttggagaggtcatagtttgtt 111172

>gb|AC147072.3| Pan troglodytes BAC clone RP43-168P22 from 7, complete sequence
          Length = 151952

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 500    ctacttgttccttcttctcc 519
              ||||||||||||||||||||
Sbjct: 142917 ctacttgttccttcttctcc 142936

>gb|AC113181.7| Mus musculus chromosome 5, clone RP23-359I6, complete sequence
          Length = 213684

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 503    cttgttccttcttctccgtt 522
              ||||||||||||||||||||
Sbjct: 137381 cttgttccttcttctccgtt 137362

>gb|AC129187.4| Mus musculus BAC clone RP23-427D4 from chromosome 5, complete sequence
          Length = 198245

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 503   cttgttccttcttctccgtt 522
             ||||||||||||||||||||
Sbjct: 37961 cttgttccttcttctccgtt 37942

>gb|AC122249.4| Mus musculus BAC clone RP23-164F15 from 1, complete sequence
          Length = 207471

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 382    tgcttgaagaggtcatagtttgtt 405
              |||||| |||||||||||||||||
Sbjct: 203925 tgcttggagaggtcatagtttgtt 203948

>gb|AC073346.12| Homo sapiens BAC clone RP11-736E3 from 7, complete sequence
          Length = 180651

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   ctacttgttccttcttctcc 519
             ||||||||||||||||||||
Sbjct: 33453 ctacttgttccttcttctcc 33434

>emb|X54253.1|MTAS Ascaris suum complete mitochondrial genome
          Length = 14284

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 192  acttcttatgctgcaacaacaaaaccag 219
            ||||||||||||  ||||||||||||||
Sbjct: 4255 acttcttatgctataacaacaaaaccag 4228

>emb|CR376736.5| Zebrafish DNA sequence from clone DKEYP-86G11 in linkage group 24,
             complete sequence
          Length = 204538

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 134   ctaataaataaaactggcatgact 157
             |||| |||||||||||||||||||
Sbjct: 56147 ctaaaaaataaaactggcatgact 56170

>gb|AC101941.11| Mus musculus chromosome 7, clone RP24-112F21, complete sequence
          Length = 157117

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 595   tggttgctgtaaggcttgtt 614
             ||||||||||||||||||||
Sbjct: 70978 tggttgctgtaaggcttgtt 70997

>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 478    agcagcaactccgcgataag 497
              ||||||||||||||||||||
Sbjct: 802604 agcagcaactccgcgataag 802623

>gb|AC058822.6| Homo sapiens BAC clone RP11-809N18 from 4, complete sequence
          Length = 170212

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   tgccatgtacagctgtgtag 259
             ||||||||||||||||||||
Sbjct: 91013 tgccatgtacagctgtgtag 90994

>ref|NM_077513.3| Caenorhabditis elegans Heavy chain, Unconventional Myosin family
            member (hum-4) (hum-4) mRNA, complete cds
          Length = 8759

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 500  ctacttgttccttcttctcc 519
            ||||||||||||||||||||
Sbjct: 7968 ctacttgttccttcttctcc 7987

>gb|AC177808.2| Pan troglodytes BAC clone CH251-703A9 from chromosome unknown,
            complete sequence
          Length = 207792

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  tgccatgtacagctgtgtag 259
            ||||||||||||||||||||
Sbjct: 3022 tgccatgtacagctgtgtag 3003

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 470     ccttctcgagcagcaactccgcga 493
               ||||||||||||||| ||||||||
Sbjct: 4928606 ccttctcgagcagcagctccgcga 4928583

>emb|Z66563.1|CEF46C3 Caenorhabditis elegans Cosmid F46C3, complete sequence
          Length = 29777

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   ctacttgttccttcttctcc 519
             ||||||||||||||||||||
Sbjct: 11078 ctacttgttccttcttctcc 11059

>gb|AC169792.2| Rhesus Macaque  BAC CH250-117K11 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 186393

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   tgccatgtacagctgtgtag 259
             ||||||||||||||||||||
Sbjct: 20044 tgccatgtacagctgtgtag 20063


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,620,991
Number of Sequences: 3902068
Number of extensions: 5620991
Number of successful extensions: 96882
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96702
Number of HSP's gapped (non-prelim): 177
length of query: 616
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 593
effective length of database: 17,143,297,704
effective search space: 10165975538472
effective search space used: 10165975538472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)