ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13k08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX901881.9| Zebrafish DNA sequence from clone CH211-138A18 i... 44 0.62
2gb|AC161375.4| Mus musculus BAC clone RP23-297A22 from chromosom... 42 2.4
3emb|AL592218.8| Human DNA sequence from clone RP5-1033M2 on chro... 42 2.4
4gb|AC024073.7| Homo sapiens chromosome 10 clone RP11-394D15, com... 42 2.4
5gb|AC113389.2| Homo sapiens chromosome 5 clone RP11-35A11, compl... 42 2.4
6emb|BX530059.4| Zebrafish DNA sequence from clone DKEYP-111B3 in... 42 2.4
7gb|AC027671.9| Homo sapiens chromosome 10 clone RP11-183F21, com... 42 2.4
8gb|AC162927.3| Mus musculus BAC clone RP23-269E12 from chromosom... 42 2.4
9gb|AC159320.3| Mus musculus BAC clone RP23-51A12 from chromosome... 42 2.4
10gb|AC147892.2| Xenopus tropicalis clone CH216-35D21, complete se... 42 2.4
11gb|AC007971.3| Homo sapiens BAC clone RP11-510C23 from 2, comple... 42 2.4
12gb|AC126684.4| Mus musculus BAC clone RP23-68L2 from chromosome ... 42 2.4
13emb|AL845423.4| Mouse DNA sequence from clone RP23-207C2 on chro... 42 2.4
14ref|XM_637794.1| Dictyostelium discoideum hypothetical protein (... 40 9.7
15ref|XM_635727.1| Dictyostelium discoideum hypothetical protein (... 40 9.7
16gb|AC161501.4| Mus musculus chromosome 3, clone RP24-150C17, com... 40 9.7
17gb|AY102286.1| Mus musculus RTN4 (Rtn4) gene, complete cds, alte... 40 9.7
18gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome ... 40 9.7
19gb|AY590800.1| Peristenus stygicus isolate PsITS2-1761 internal ... 40 9.7
20gb|AC117076.3| Dictyostelium discoideum chromosome 2 map 3323568... 40 9.7
21ref|XM_532621.2| PREDICTED: Canis familiaris similar to quattro ... 40 9.7
22gb|AC116557.30| Mus musculus strain C57BL/6J clone rp23-239f10 m... 40 9.7
23gb|AC009119.10| Homo sapiens chromosome 16 clone RP11-483P21, co... 40 9.7
24gb|AC123042.2| Mus musculus BAC clone RP24-545O17 from 10, compl... 40 9.7
25ref|XM_724465.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 9.7
26gb|AC153643.22| Medicago truncatula clone mth2-109d3, complete s... 40 9.7
27gb|AC149079.7| Medicago truncatula clone mth2-75i8, complete seq... 40 9.7
28emb|AL358593.22| Human DNA sequence from clone RP11-473A10 on ch... 40 9.7
29emb|CR376751.15| Zebrafish DNA sequence from clone CH211-220M6 i... 40 9.7
30emb|CR847797.8| Zebrafish DNA sequence from clone DKEY-281F2 in ... 40 9.7
31emb|AL929371.6| Mouse DNA sequence from clone RP23-176O5 on chro... 40 9.7
32emb|BX530083.11| Zebrafish DNA sequence from clone DKEY-3L17 in ... 40 9.7
33emb|AL929349.10| Zebrafish DNA sequence from clone CH211-207D24 ... 40 9.7
34emb|BX908757.10| Zebrafish DNA sequence from clone DKEY-206L1 in... 40 9.7
35gb|AC009435.5| Homo sapiens chromosome , clone RP11-124B13, comp... 40 9.7
36gb|AC009036.7| Homo sapiens chromosome 16 clone RP11-142L23, com... 40 9.7
37ref|XM_678271.1| PREDICTED: Danio rerio similar to Fras1 related... 40 9.7
38gb|AC099538.2| Homo sapiens chromosome 3 clone RP11-90I9, comple... 40 9.7
39dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
40gb|AC012320.6|AC012320 Homo sapiens chromosome 16 clone RP11-280... 40 9.7
41gb|AC154738.2| Mus musculus BAC clone RP24-390D14 from chromosom... 40 9.7
42gb|AC011727.16| Homo sapiens chromosome 8, clone RP11-10H7, comp... 40 9.7
43gb|AC100870.6| Homo sapiens chromosome 8, clone RP11-758H6, comp... 40 9.7
44dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
45dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
46dbj|AK068562.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.7
47gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone ... 40 9.7
48gb|AC164099.3| Mus musculus BAC clone RP23-10H9 from chromosome ... 40 9.7
49gb|AC107371.17| Mus musculus chromosome 7, clone RP24-66D2, comp... 40 9.7
50gb|AC111041.11| Mus musculus chromosome 7, clone RP24-67N23, com... 40 9.7
51gb|AC141564.4| Mus musculus BAC clone RP23-361B14 from 10, compl... 40 9.7
52gb|AC130716.3| Mus musculus BAC clone RP23-463B12 from 3, comple... 40 9.7
53emb|AL773530.9| Mouse DNA sequence from clone RP23-180A8 on chro... 40 9.7
54emb|AL808111.4| Mouse DNA sequence from clone RP23-355J9 on chro... 40 9.7 
>emb|BX901881.9| Zebrafish DNA sequence from clone CH211-138A18 in linkage group 1,
              complete sequence
          Length = 166876

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 404    catggaatttttcagcacagtt 425
              ||||||||||||||||||||||
Sbjct: 103066 catggaatttttcagcacagtt 103045
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>gb|AC161375.4| Mus musculus BAC clone RP23-297A22 from chromosome 14, complete
             sequence
          Length = 211662

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 226   cctgggttccttcctctgctt 246
             |||||||||||||||||||||
Sbjct: 33274 cctgggttccttcctctgctt 33254
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>emb|AL592218.8| Human DNA sequence from clone RP5-1033M2 on chromosome 1 Contains the
             3' end of the ITGB3BP gene for integrin beta 3 binding
             protein (beta3-endonexin) and the 3' end of the ALG6 gene
             for asparagine-linked glycosylation 6 homolog (yeast
             alpha-1 3-glucosyltransferase), complete sequence
          Length = 39383

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 561   gcctctgggttgctgtcaccc 581
             |||||||||||||||||||||
Sbjct: 31542 gcctctgggttgctgtcaccc 31562
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>gb|AC024073.7| Homo sapiens chromosome 10 clone RP11-394D15, complete sequence
          Length = 172892

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    ctacataatagtttgcacaaa 67
             |||||||||||||||||||||
Sbjct: 32062 ctacataatagtttgcacaaa 32042
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>gb|AC113389.2| Homo sapiens chromosome 5 clone RP11-35A11, complete sequence
          Length = 170706

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 126  attctttttaaaaatgataca 146
            |||||||||||||||||||||
Sbjct: 8169 attctttttaaaaatgataca 8149
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>emb|BX530059.4| Zebrafish DNA sequence from clone DKEYP-111B3 in linkage group 21,
              complete sequence
          Length = 179045

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    tctgcattctttttaaaaatg 141
              |||||||||||||||||||||
Sbjct: 128482 tctgcattctttttaaaaatg 128502
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>gb|AC027671.9| Homo sapiens chromosome 10 clone RP11-183F21, complete sequence
          Length = 152867

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 47     ctacataatagtttgcacaaa 67
              |||||||||||||||||||||
Sbjct: 132099 ctacataatagtttgcacaaa 132079
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>gb|AC162927.3| Mus musculus BAC clone RP23-269E12 from chromosome 9, complete sequence
          Length = 213948

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 125   cattctttttaaaaatgatac 145
             |||||||||||||||||||||
Sbjct: 82821 cattctttttaaaaatgatac 82841
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>gb|AC159320.3| Mus musculus BAC clone RP23-51A12 from chromosome 14, complete sequence
          Length = 255936

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 226   cctgggttccttcctctgctt 246
             |||||||||||||||||||||
Sbjct: 64623 cctgggttccttcctctgctt 64643
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>gb|AC147892.2| Xenopus tropicalis clone CH216-35D21, complete sequence
          Length = 178580

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 89     taacagcattatcatgacatt 109
              |||||||||||||||||||||
Sbjct: 111568 taacagcattatcatgacatt 111548
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>gb|AC007971.3| Homo sapiens BAC clone RP11-510C23 from 2, complete sequence
          Length = 146705

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 684   cagatcttcgcatgcttcttt 704
             |||||||||||||||||||||
Sbjct: 77347 cagatcttcgcatgcttcttt 77367
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>gb|AC126684.4| Mus musculus BAC clone RP23-68L2 from chromosome 14, complete sequence
          Length = 233755

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 226    cctgggttccttcctctgctt 246
              |||||||||||||||||||||
Sbjct: 153069 cctgggttccttcctctgctt 153049
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>emb|AL845423.4| Mouse DNA sequence from clone RP23-207C2 on chromosome 2, complete
             sequence
          Length = 97017

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   aatgtctctgcattctttttaaaaa 139
             |||| ||||||||||||||||||||
Sbjct: 24881 aatggctctgcattctttttaaaaa 24905
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>ref|XM_637794.1| Dictyostelium discoideum hypothetical protein (DDB0217880), partial
           mRNA
          Length = 3483

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 534 gataattttgacattgcaaa 553
           ||||||||||||||||||||
Sbjct: 161 gataattttgacattgcaaa 142
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>ref|XM_635727.1| Dictyostelium discoideum hypothetical protein (DDB0204015), partial
           mRNA
          Length = 1023

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 512 ttttaaaccaaccattgcatcaga 535
           |||||||||||| |||||||||||
Sbjct: 747 ttttaaaccaacaattgcatcaga 724
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>gb|AC161501.4| Mus musculus chromosome 3, clone RP24-150C17, complete sequence
          Length = 155378

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 492   tctgacccatttgctttctctttt 515
             ||||||||||||| ||||||||||
Sbjct: 95960 tctgacccatttgatttctctttt 95983
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>gb|AY102286.1| Mus musculus RTN4 (Rtn4) gene, complete cds, alternatively spliced
          Length = 60615

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   ttctttttaaaaatgataca 146
             ||||||||||||||||||||
Sbjct: 36021 ttctttttaaaaatgataca 36040
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>gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome 14, complete sequence
          Length = 209896

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 572    gctgtcacccattcgcacaa 591
              ||||||||||||||||||||
Sbjct: 140431 gctgtcacccattcgcacaa 140412
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>gb|AY590800.1| Peristenus stygicus isolate PsITS2-1761 internal transcribed spacer
           2, complete sequence
          Length = 766

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 658 ctttgtatatttttcaagta 677
           ||||||||||||||||||||
Sbjct: 635 ctttgtatatttttcaagta 654
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>gb|AC117076.3| Dictyostelium discoideum chromosome 2 map 3323568-3470138 strain AX4,
              complete sequence
          Length = 146570

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 534    gataattttgacattgcaaa 553
              ||||||||||||||||||||
Sbjct: 129447 gataattttgacattgcaaa 129466
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>ref|XM_532621.2| PREDICTED: Canis familiaris similar to quattro (LOC475398), mRNA
          Length = 5341

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  gttccttcctctgcttcttg 250
            ||||||||||||||||||||
Sbjct: 4957 gttccttcctctgcttcttg 4976
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>gb|AC116557.30| Mus musculus strain C57BL/6J clone rp23-239f10 map 8, complete sequence
          Length = 232571

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    ttctttttaaaaatgataca 146
              ||||||||||||||||||||
Sbjct: 101416 ttctttttaaaaatgataca 101397
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>gb|AC009119.10| Homo sapiens chromosome 16 clone RP11-483P21, complete sequence
          Length = 181020

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 446   catatcaattttttctttgt 465
             ||||||||||||||||||||
Sbjct: 43369 catatcaattttttctttgt 43388
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>gb|AC123042.2| Mus musculus BAC clone RP24-545O17 from 10, complete sequence
          Length = 177899

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   tgagataatgtctctgcatt 128
             ||||||||||||||||||||
Sbjct: 75832 tgagataatgtctctgcatt 75851
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>ref|XM_724465.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01757)
            partial mRNA
          Length = 1890

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 445  gcatatcaattttttctttgtcta 468
            |||||| |||||||||||||||||
Sbjct: 1825 gcatattaattttttctttgtcta 1802
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>gb|AC153643.22| Medicago truncatula clone mth2-109d3, complete sequence
          Length = 114250

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  ctttttaaaaatgatacaca 148
            ||||||||||||||||||||
Sbjct: 4389 ctttttaaaaatgatacaca 4370
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>gb|AC149079.7| Medicago truncatula clone mth2-75i8, complete sequence
          Length = 121295

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   ctttttaaaaatgatacaca 148
             ||||||||||||||||||||
Sbjct: 43761 ctttttaaaaatgatacaca 43780
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>emb|AL358593.22| Human DNA sequence from clone RP11-473A10 on chromosome 1 Contains the 3'
              end of the gene for a novel protein (KIAA1626, FLJ34701,
              FLJ44929, FLJ10521) and the 5' end of a novel gene,
              complete sequence
          Length = 142454

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    cctgggttccttcctctgct 245
              ||||||||||||||||||||
Sbjct: 107558 cctgggttccttcctctgct 107577
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>emb|CR376751.15| Zebrafish DNA sequence from clone CH211-220M6 in linkage group 8,
            complete sequence
          Length = 229078

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 114  taatgtctctgcattctttttaaaaatg 141
            |||||||||||| || ||||||||||||
Sbjct: 9837 taatgtctctgctttgtttttaaaaatg 9864
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>emb|CR847797.8| Zebrafish DNA sequence from clone DKEY-281F2 in linkage group 8,
             complete sequence
          Length = 219913

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 114   taatgtctctgcattctttttaaaaatg 141
             |||||||||||| || ||||||||||||
Sbjct: 17289 taatgtctctgctttgtttttaaaaatg 17316
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>emb|AL929371.6| Mouse DNA sequence from clone RP23-176O5 on chromosome 11 Contains a
              ribosomal protein S2 (Rps2) pseudogene, a novel gene, an
              apurinic/apyrimidinic endonuclease 2 (Apex2) pseudogene,
              the Rtn4 gene for reticulon 4, the 3' end of the gene for a
              novel protein (C230094A16Rik) (MGC38936) and a CpG island,
              complete sequence
          Length = 212042

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    ttctttttaaaaatgataca 146
              ||||||||||||||||||||
Sbjct: 124829 ttctttttaaaaatgataca 124848
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>emb|BX530083.11| Zebrafish DNA sequence from clone DKEY-3L17 in linkage group 10,
             complete sequence
          Length = 155046

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 558   aaagcctctgggttgctgtc 577
             ||||||||||||||||||||
Sbjct: 25895 aaagcctctgggttgctgtc 25914
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>emb|AL929349.10| Zebrafish DNA sequence from clone CH211-207D24 in linkage group 20
              Contains eight CpG islands, complete sequence
          Length = 196371

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 541    ttgacattgcaaactcaaaa 560
              ||||||||||||||||||||
Sbjct: 183748 ttgacattgcaaactcaaaa 183767
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>emb|BX908757.10| Zebrafish DNA sequence from clone DKEY-206L1 in linkage group 22,
            complete sequence
          Length = 143845

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  ctttttaaaaatgatacaca 148
            ||||||||||||||||||||
Sbjct: 2338 ctttttaaaaatgatacaca 2319
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>gb|AC009435.5| Homo sapiens chromosome , clone RP11-124B13, complete sequence
          Length = 133148

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   ttccttcctctgcttcttgt 251
             ||||||||||||||||||||
Sbjct: 83896 ttccttcctctgcttcttgt 83877
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>gb|AC009036.7| Homo sapiens chromosome 16 clone RP11-142L23, complete sequence
          Length = 193790

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 446    catatcaattttttctttgt 465
              ||||||||||||||||||||
Sbjct: 106525 catatcaattttttctttgt 106544
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>ref|XM_678271.1| PREDICTED: Danio rerio similar to Fras1 related extracellular matrix
            protein 1 (LOC555681), mRNA
          Length = 5055

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 558  aaagcctctgggttgctgtc 577
            ||||||||||||||||||||
Sbjct: 4802 aaagcctctgggttgctgtc 4783
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>gb|AC099538.2| Homo sapiens chromosome 3 clone RP11-90I9, complete sequence
          Length = 170033

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 529    catcagataattttgacatt 548
              ||||||||||||||||||||
Sbjct: 136277 catcagataattttgacatt 136296
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 521     aaccattgcatcagataatt 540
               ||||||||||||||||||||
Sbjct: 9863270 aaccattgcatcagataatt 9863289
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>gb|AC012320.6|AC012320 Homo sapiens chromosome 16 clone RP11-280N16, complete sequence
          Length = 189840

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 446    catatcaattttttctttgt 465
              ||||||||||||||||||||
Sbjct: 164871 catatcaattttttctttgt 164890
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>gb|AC154738.2| Mus musculus BAC clone RP24-390D14 from chromosome 14, complete sequence
          Length = 197100

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    ttgagtcctgatgtgtcctg 206
              ||||||||||||||||||||
Sbjct: 190404 ttgagtcctgatgtgtcctg 190385
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>gb|AC011727.16| Homo sapiens chromosome 8, clone RP11-10H7, complete sequence
          Length = 152530

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   ttccttcctctgcttcttgt 251
             ||||||||||||||||||||
Sbjct: 10240 ttccttcctctgcttcttgt 10221
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>gb|AC100870.6| Homo sapiens chromosome 8, clone RP11-758H6, complete sequence
          Length = 188873

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 409    aatttttcagcacagttttt 428
              ||||||||||||||||||||
Sbjct: 125132 aatttttcagcacagttttt 125113
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>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 521    aaccattgcatcagataatt 540
              ||||||||||||||||||||
Sbjct: 153512 aaccattgcatcagataatt 153531
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>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 521   aaccattgcatcagataatt 540
             ||||||||||||||||||||
Sbjct: 59905 aaccattgcatcagataatt 59924
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>dbj|AK068562.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152E19, full
            insert sequence
          Length = 2339

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   aaaagtttgatacccccaat 85
            ||||||||||||||||||||
Sbjct: 1800 aaaagtttgatacccccaat 1819
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>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from
             chromosome 4, complete sequence
          Length = 90825

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    aaaagtttgatacccccaat 85
             ||||||||||||||||||||
Sbjct: 19024 aaaagtttgatacccccaat 19005
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>gb|AC164099.3| Mus musculus BAC clone RP23-10H9 from chromosome 14, complete sequence
          Length = 221612

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    ttgagtcctgatgtgtcctg 206
              ||||||||||||||||||||
Sbjct: 187904 ttgagtcctgatgtgtcctg 187923
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>gb|AC107371.17| Mus musculus chromosome 7, clone RP24-66D2, complete sequence
          Length = 214373

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 529    catcagataattttgacatt 548
              ||||||||||||||||||||
Sbjct: 145881 catcagataattttgacatt 145862
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>gb|AC111041.11| Mus musculus chromosome 7, clone RP24-67N23, complete sequence
          Length = 175930

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 529   catcagataattttgacatt 548
             ||||||||||||||||||||
Sbjct: 15830 catcagataattttgacatt 15811
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>gb|AC141564.4| Mus musculus BAC clone RP23-361B14 from 10, complete sequence
          Length = 210784

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    tgagataatgtctctgcatt 128
              ||||||||||||||||||||
Sbjct: 208986 tgagataatgtctctgcatt 209005
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>gb|AC130716.3| Mus musculus BAC clone RP23-463B12 from 3, complete sequence
          Length = 172517

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   aatttttcagcacagttttt 428
             ||||||||||||||||||||
Sbjct: 58798 aatttttcagcacagttttt 58779
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>emb|AL773530.9| Mouse DNA sequence from clone RP23-180A8 on chromosome 2, complete
              sequence
          Length = 188424

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 503    tgctttctcttttaaaccaa 522
              ||||||||||||||||||||
Sbjct: 137870 tgctttctcttttaaaccaa 137851
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>emb|AL808111.4| Mouse DNA sequence from clone RP23-355J9 on chromosome X, complete
             sequence
          Length = 199724

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   tctgcattctttttaaaaat 140
             ||||||||||||||||||||
Sbjct: 45886 tctgcattctttttaaaaat 45867


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,761,653
Number of Sequences: 3902068
Number of extensions: 7761653
Number of successful extensions: 163289
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 163089
Number of HSP's gapped (non-prelim): 200
length of query: 705
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 682
effective length of database: 17,143,297,704
effective search space: 11691729034128
effective search space used: 11691729034128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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