ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13k05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LEA14_GOSHI (P46518) Late embryogenesis abundant protein Lea14-A 186 7e-47
2LEA14_SOYBN (P46519) Desiccation protectant protein Lea14 homolog 185 9e-47
3LEA14_ARATH (O03983) Putative dessication-related protein LEA14 176 4e-44
4DRPD_CRAPL (P22241) Desiccation-related protein PCC27-45 152 8e-37
5HEM1_SCHPO (O14092) 5-aminolevulinate synthase, mitochondrial pr... 30 6.2
6SRPR_HUMAN (P08240) Signal recognition particle receptor alpha s... 30 8.1

>LEA14_GOSHI (P46518) Late embryogenesis abundant protein Lea14-A|
          Length = 151

 Score =  186 bits (471), Expect = 7e-47
 Identities = 88/152 (57%), Positives = 117/152 (76%)
 Frame = -1

Query: 585 MAGLLDKAKGFVADKIAHMPKPEATLDKVSFKGMTREAITVHSHVNVTNPYSHRIPICDI 406
           M+ LL+KAK FV DK+A++ KPEA++  V  K ++RE +   + V+V+NPYSH IPIC+I
Sbjct: 1   MSQLLEKAKDFVVDKVANIKKPEASVSDVDLKHVSRECVEYGAKVSVSNPYSHSIPICEI 60

Query: 405 AFTLKCGGKEVASGTIPDPGWIEDSGEVTKLEVPAKVPYDFLISLMKDLGRDWDIDYELL 226
           ++  +  G+ +ASGTIPDPG ++ S + T L+VP KVPY+ L+SL+KD+G DWDIDYEL 
Sbjct: 61  SYNFRSAGRGIASGTIPDPGSLKAS-DTTMLDVPVKVPYNILVSLVKDIGADWDIDYELE 119

Query: 225 VKLTIDLPIIGNFTIPLQTAGEFKLPTLSDFF 130
           + LTIDLPI+GNFTIPL   GE KLPTLSD F
Sbjct: 120 LGLTIDLPIVGNFTIPLSQKGEIKLPTLSDIF 151



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>LEA14_SOYBN (P46519) Desiccation protectant protein Lea14 homolog|
          Length = 152

 Score =  185 bits (470), Expect = 9e-47
 Identities = 89/152 (58%), Positives = 118/152 (77%)
 Frame = -1

Query: 585 MAGLLDKAKGFVADKIAHMPKPEATLDKVSFKGMTREAITVHSHVNVTNPYSHRIPICDI 406
           M+ LLDKAK +VA+K+ +MPKPEA++  V FK ++R+++   + V+V+NPYS  IPIC+I
Sbjct: 1   MSQLLDKAKNYVAEKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPICEI 60

Query: 405 AFTLKCGGKEVASGTIPDPGWIEDSGEVTKLEVPAKVPYDFLISLMKDLGRDWDIDYELL 226
            ++LK  GKE+ASGTIPDPG ++ S + T L+VP KVP+  L+SL KD+G DWDIDY+L 
Sbjct: 61  KYSLKSAGKEIASGTIPDPGSLKAS-DTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLD 119

Query: 225 VKLTIDLPIIGNFTIPLQTAGEFKLPTLSDFF 130
           + L IDLP+IGNFTIPL   GE KLPTLSD F
Sbjct: 120 LGLVIDLPVIGNFTIPLSQKGEIKLPTLSDMF 151



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>LEA14_ARATH (O03983) Putative dessication-related protein LEA14|
          Length = 151

 Score =  176 bits (447), Expect = 4e-44
 Identities = 81/152 (53%), Positives = 110/152 (72%)
 Frame = -1

Query: 585 MAGLLDKAKGFVADKIAHMPKPEATLDKVSFKGMTREAITVHSHVNVTNPYSHRIPICDI 406
           MA LLDKAK FVADK+  +PKPE ++  V  K + R+++   + V+VTNPYSH IPIC+I
Sbjct: 1   MASLLDKAKDFVADKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEI 60

Query: 405 AFTLKCGGKEVASGTIPDPGWIEDSGEVTKLEVPAKVPYDFLISLMKDLGRDWDIDYELL 226
           +FT    G+E+  G IPDPG ++ + ++T L++P  VPY  L +L +D+G DWDIDYEL 
Sbjct: 61  SFTFHSAGREIGKGKIPDPGSLK-AKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQ 119

Query: 225 VKLTIDLPIIGNFTIPLQTAGEFKLPTLSDFF 130
           + LTIDLP++G FTIP+ + GE KLPT  DFF
Sbjct: 120 IGLTIDLPVVGEFTIPISSKGEIKLPTFKDFF 151



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>DRPD_CRAPL (P22241) Desiccation-related protein PCC27-45|
          Length = 151

 Score =  152 bits (384), Expect = 8e-37
 Identities = 77/152 (50%), Positives = 105/152 (69%)
 Frame = -1

Query: 585 MAGLLDKAKGFVADKIAHMPKPEATLDKVSFKGMTREAITVHSHVNVTNPYSHRIPICDI 406
           MA L++KAK FVA+K+A++ KP+A+++ V  K + R  IT  + + V NPYS  IP+ +I
Sbjct: 1   MAQLMNKAKNFVAEKVANVEKPKASVEDVDLKDVGRHGITYLTRICVENPYSASIPVGEI 60

Query: 405 AFTLKCGGKEVASGTIPDPGWIEDSGEVTKLEVPAKVPYDFLISLMKDLGRDWDIDYELL 226
            +TLK  G+ + SG IPDPG ++   + T LE   KVP+  L+SL+KD+G D DIDY L 
Sbjct: 61  KYTLKSAGRVIVSGNIPDPGSLK-GNDKTMLEPAIKVPHSALVSLIKDIGADMDIDYVLE 119

Query: 225 VKLTIDLPIIGNFTIPLQTAGEFKLPTLSDFF 130
           + L +DLP+IGNFTIPL   GE KLP LSD F
Sbjct: 120 LGLVVDLPVIGNFTIPLSHKGEMKLPGLSDIF 151



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>HEM1_SCHPO (O14092) 5-aminolevulinate synthase, mitochondrial precursor (EC|
           2.3.1.37) (5-aminolevulinic acid synthase)
           (Delta-aminolevulinate synthase) (Delta-ALA synthetase)
          Length = 558

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 278 MRKSYGTLAG---TSSLVTSPLSSIQPGSGMVPLATSLPPHLRVKAMS 412
           + KSYG + G    SS +   + S+ PG       TSLPPH+ V A++
Sbjct: 375 LAKSYGCVGGYIAASSTLVDMIRSLAPG---FIFTTSLPPHVMVGALT 419



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>SRPR_HUMAN (P08240) Signal recognition particle receptor alpha subunit|
           (SR-alpha) (Docking protein alpha) (DP-alpha)
          Length = 638

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -1

Query: 642 SDRAGAGARKKLEEETRGSMAGLLDKAKGFVADKIAHMPKPEATLDKV 499
           SD  GA         T+G++ G+    KG V  K       E+ LDK+
Sbjct: 298 SDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 345


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,155,661
Number of Sequences: 219361
Number of extensions: 815246
Number of successful extensions: 3244
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3238
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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