ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags13k05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY823547.1| Pennisetum glaucum late embryonic abundant-like protein mRNA, complete cds Length = 670 Score = 299 bits (151), Expect = 6e-78 Identities = 343/402 (85%), Gaps = 5/402 (1%) Strand = Plus / Minus Query: 178 cgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctcgta 237 |||||||||||||||||||| ||||||||| |||||||||||| || |||||||||| Sbjct: 536 cgggatggtgaagttgccgacgatggggag-tcgatggtgagccccacctggagctcgta 478 Query: 238 gtcgatgtccca-gtccctgcccaggtccttcatgagcgagatgaggaagtcgtatggca 296 |||||||||||| ||||||||| | |||||| | || |||||||||||||||||| |||| Sbjct: 477 gtcgatgtcccaagtccctgccgacgtccttgacgatcgagatgaggaagtcgtagggca 418 Query: 297 ccttggcgggcacctccagcttggtcacctcgccgctgtcctcgatccagcccgggtccg 356 ||||||| || | |||||||||||| || | ||||| | |||||||||| ||||| | Sbjct: 417 ccttggctgggatctccagcttggtg--ct-gtcgctggcggcgatccagccggggtcgg 361 Query: 357 ggatggtgccgctcgccacctccttgccgccgcacttgagggtgaaggcgatgtcgcaga 416 | ||||||||| ||| || |||| ||| |||||||||||||| ||| || ||||||| Sbjct: 360 gcatggtgccggacgcaacgacctttccggcgcacttgagggtgtaggtgacctcgcaga 301 Query: 417 tggggatgcggtgggagtaggggttggtgacgttgacgtggctgtgcacggtgatggcct 476 |||||| ||||||| |||||||||||||| |||||||| |||||| | ||||||| || Sbjct: 300 tggggaggcggtggtcgtaggggttggtgatgttgacgttgctgtggagggtgatgcact 241 Query: 477 cgcgggtcatgcccttgaagctcaccttgtccagcgtcgcctccggcttgggcatgtgcg 536 ||||| |||||| ||||||| || ||||||||| ||||||||||||||| ||||||| Sbjct: 240 cgcggctcatgctcttgaaggagacgctgtccagcgacgcctccggcttggggatgtgcg 181 Query: 537 cgatcttgtccgccacgaaccccttggccttgtccagcaggc 578 |||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 180 cgatcttgtccgccacgaactccttggccttgtccatcaggc 139
>ref|XM_475961.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 456 Score = 285 bits (144), Expect = 9e-74 Identities = 335/398 (84%), Gaps = 3/398 (0%) Strand = Plus / Minus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 ||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| Sbjct: 408 gagcgggatggtgaagttgccgacgatggggaggtcgatggtgaggccgacgtcgagctg 349 Query: 235 gtagtcgatgtcccagtccctgcccaggtccttcatgagcgagatgaggaagtcgtatgg 294 |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 348 gtagtcgatgtcccagtcccggcccacgtccttcaccagcgagatgaggaagtcgtaggg 289 Query: 295 caccttggcgggcacctccagcttggtcacctcgccgctgtcctcgatccagcccgggtc 354 | |||||| || | ||||||||| || | | |||| || ||||||| ||||| || Sbjct: 288 gatcttggccggtatctccagcttcgt---cgtgtcgctcgccgcgatccaccccggatc 232 Query: 355 cgggatggtgccgctcgccacctccttgccgccgcacttgagggtgaaggcgatgtcgca 414 || || |||||| |||||| | |||||| |||||||||||||| ||| || ||||| Sbjct: 231 gggcatcgtgccggacgccacaacgttgccggcgcacttgagggtgtaggtgagctcgca 172 Query: 415 gatggggatgcggtgggagtaggggttggtgacgttgacgtggctgtgcacggtgatggc 474 |||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 171 gatggggaggcggtggtcgtaggggttggagacgttgacgttgctgtgcacggtgatgca 112 Query: 475 ctcgcgggtcatgcccttgaagctcaccttgtccagcgtcgcctccggcttgggcatgtg 534 ||||||| |||| |||||||| || ||||||||| |||||||||||| || ||||| Sbjct: 111 ctcgcggctcatccccttgaacgacaagctgtccagcgacgcctccggctttgggatgtg 52 Query: 535 cgcgatcttgtccgccacgaaccccttggccttgtcca 572 ||||||||| |||||||||||||| || |||||||||| Sbjct: 51 cgcgatcttctccgccacgaaccctttcgccttgtcca 14
>dbj|AK066062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050C18, full insert sequence Length = 947 Score = 285 bits (144), Expect = 9e-74 Identities = 335/398 (84%), Gaps = 3/398 (0%) Strand = Plus / Minus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 ||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| Sbjct: 710 gagcgggatggtgaagttgccgacgatggggaggtcgatggtgaggccgacgtcgagctg 651 Query: 235 gtagtcgatgtcccagtccctgcccaggtccttcatgagcgagatgaggaagtcgtatgg 294 |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 650 gtagtcgatgtcccagtcccggcccacgtccttcaccagcgagatgaggaagtcgtaggg 591 Query: 295 caccttggcgggcacctccagcttggtcacctcgccgctgtcctcgatccagcccgggtc 354 | |||||| || | ||||||||| || | | |||| || ||||||| ||||| || Sbjct: 590 gatcttggccggtatctccagcttcgt---cgtgtcgctcgccgcgatccaccccggatc 534 Query: 355 cgggatggtgccgctcgccacctccttgccgccgcacttgagggtgaaggcgatgtcgca 414 || || |||||| |||||| | |||||| |||||||||||||| ||| || ||||| Sbjct: 533 gggcatcgtgccggacgccacaacgttgccggcgcacttgagggtgtaggtgagctcgca 474 Query: 415 gatggggatgcggtgggagtaggggttggtgacgttgacgtggctgtgcacggtgatggc 474 |||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 473 gatggggaggcggtggtcgtaggggttggagacgttgacgttgctgtgcacggtgatgca 414 Query: 475 ctcgcgggtcatgcccttgaagctcaccttgtccagcgtcgcctccggcttgggcatgtg 534 ||||||| |||| |||||||| || ||||||||| |||||||||||| || ||||| Sbjct: 413 ctcgcggctcatccccttgaacgacaagctgtccagcgacgcctccggctttgggatgtg 354 Query: 535 cgcgatcttgtccgccacgaaccccttggccttgtcca 572 ||||||||| |||||||||||||| || |||||||||| Sbjct: 353 cgcgatcttctccgccacgaaccctttcgccttgtcca 316
>dbj|AK061818.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-B08, full insert sequence Length = 1125 Score = 285 bits (144), Expect = 9e-74 Identities = 335/398 (84%), Gaps = 3/398 (0%) Strand = Plus / Minus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 ||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| Sbjct: 888 gagcgggatggtgaagttgccgacgatggggaggtcgatggtgaggccgacgtcgagctg 829 Query: 235 gtagtcgatgtcccagtccctgcccaggtccttcatgagcgagatgaggaagtcgtatgg 294 |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 828 gtagtcgatgtcccagtcccggcccacgtccttcaccagcgagatgaggaagtcgtaggg 769 Query: 295 caccttggcgggcacctccagcttggtcacctcgccgctgtcctcgatccagcccgggtc 354 | |||||| || | ||||||||| || | | |||| || ||||||| ||||| || Sbjct: 768 gatcttggccggtatctccagcttcgt---cgtgtcgctcgccgcgatccaccccggatc 712 Query: 355 cgggatggtgccgctcgccacctccttgccgccgcacttgagggtgaaggcgatgtcgca 414 || || |||||| |||||| | |||||| |||||||||||||| ||| || ||||| Sbjct: 711 gggcatcgtgccggacgccacaacgttgccggcgcacttgagggtgtaggtgagctcgca 652 Query: 415 gatggggatgcggtgggagtaggggttggtgacgttgacgtggctgtgcacggtgatggc 474 |||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 651 gatggggaggcggtggtcgtaggggttggagacgttgacgttgctgtgcacggtgatgca 592 Query: 475 ctcgcgggtcatgcccttgaagctcaccttgtccagcgtcgcctccggcttgggcatgtg 534 ||||||| |||| |||||||| || ||||||||| |||||||||||| || ||||| Sbjct: 591 ctcgcggctcatccccttgaacgacaagctgtccagcgacgcctccggctttgggatgtg 532 Query: 535 cgcgatcttgtccgccacgaaccccttggccttgtcca 572 ||||||||| |||||||||||||| || |||||||||| Sbjct: 531 cgcgatcttctccgccacgaaccctttcgccttgtcca 494
>gb|AY105938.1| Zea mays PCO134925 mRNA sequence Length = 913 Score = 278 bits (140), Expect = 2e-71 Identities = 364/438 (83%), Gaps = 3/438 (0%) Strand = Plus / Minus Query: 141 tgagcgtgggcagcttgaactcgccggcggtctggagcgggatggtgaagttgccgatga 200 |||| ||||| |||||||||||||| | ||| ||||||||||||||||||||||| || Sbjct: 680 tgagggtggggagcttgaactcgccagaggtggagagcgggatggtgaagttgccgacga 621 Query: 201 tggggaggtcgatggtgagcttgacgaggagctcgtagtcgatgtcccagtccctgccca 260 |||||||||||| ||||||| ||| ||||||||||||||||||||||||||| ||| | Sbjct: 620 tggggaggtcgacggtgagcccgacctggagctcgtagtcgatgtcccagtcccggccga 561 Query: 261 ggtccttcatgagcgagatgaggaagtcgtatggcaccttggcgggcacctccagcttgg 320 |||| | | ||| |||| |||||||||||| |||||||||||||| | ||||||| || Sbjct: 560 cgtccctgacgagggagacgaggaagtcgtagggcaccttggcggggatctccagcgcgg 501 Query: 321 tcacctcgccgctgtcctcgatccagcccgggtccgggatggtgccgctcgccacctcct 380 | ||||||| | |||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 500 tgga---gccgctggcggcgatccagccggggtccggcatggtgccggacgccacctcct 444 Query: 381 tgccgccgcacttgagggtgaaggcgatgtcgcagatggggatgcggtgggagtaggggt 440 ||||| ||||| ||| ||| ||| | ||||||||||||| ||||||| |||||||| Sbjct: 443 tgccggcgcaccggagcgtgtaggtcacctcgcagatggggaggcggtggtcgtaggggt 384 Query: 441 tggtgacgttgacgtggctgtgcacggtgatggcctcgcgggtcatgcccttgaagctca 500 ||| ||||| ||| |||||||| |||||| ||| ||| ||| ||||||||| ||| Sbjct: 383 tggacacgttcacgctgctgtgcagcgtgatgcactcccggctcaggcccttgaacgtca 324 Query: 501 ccttgtccagcgtcgcctccggcttgggcatgtgcgcgatcttgtccgccacgaacccct 560 | ||||||||||||||| |||||||| |||||||||||||| ||||| |||||||||| Sbjct: 323 cgccgtccagcgtcgcctcgggcttggggatgtgcgcgatcttctccgcgacgaacccct 264 Query: 561 tggccttgtccagcaggc 578 | |||||||||| ||||| Sbjct: 263 tcgccttgtccatcaggc 246
>ref|NM_192875.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 543 Score = 182 bits (92), Expect = 1e-42 Identities = 322/398 (80%), Gaps = 3/398 (0%) Strand = Plus / Minus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 |||||||||||||||| |||||| || ||||||||||||||||| | ||| ||| | Sbjct: 492 gagcgggatggtgaagctgccgacgacggggaggtcgatggtgatcccgacctccagcac 433 Query: 235 gtagtcgatgtcccagtccctgcccaggtccttcatgagcgagatgaggaagtcgtatgg 294 |||||||||||||||||||| || || |||||| || ||||| | || ||||||||| || Sbjct: 432 gtagtcgatgtcccagtccccgctcacgtccttgatcagcgacacgatgaagtcgtacgg 373 Query: 295 caccttggcgggcacctccagcttggtcacctcgccgctgtcctcgatccagcccgggtc 354 |||||| | |||| |||||| || ||| | ||||| || ||||||| || ||||| Sbjct: 372 caccttcaccggcagctccagatttgtcgtc---ccgctcgccgcgatccaccctgggtc 316 Query: 355 cgggatggtgccgctcgccacctccttgccgccgcacttgagggtgaaggcgatgtcgca 414 || || |||||| ||| | | ||||| |||||| ||||| |||| ||| || ||||| Sbjct: 315 aggcatcgtgccggacgctatcaccttgtcgccgctcttgaaggtgtaggtgagctcgca 256 Query: 415 gatggggatgcggtgggagtaggggttggtgacgttgacgtggctgtgcacggtgatggc 474 ||||||||||||||| |||||||||||| |||||| || ||||||||| | |||||| Sbjct: 255 gatggggatgcggtgcgagtaggggttgttgacgtcgaggtggctgtggagcgtgatgca 196 Query: 475 ctcgcgggtcatgcccttgaagctcaccttgtccagcgtcgcctccggcttgggcatgtg 534 ||||||| | | |||||||||| || |||||||||||| || |||||||| || | Sbjct: 195 ctcgcggctgacgcccttgaaggagacgcggtccagcgtcgcgtcgggcttggggatttt 136 Query: 535 cgcgatcttgtccgccacgaaccccttggccttgtcca 572 ||||||||| ||||||||||||||||||||| |||||| Sbjct: 135 cgcgatcttctccgccacgaaccccttggccctgtcca 98
>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07, complete sequence Length = 148731 Score = 178 bits (90), Expect = 2e-41 Identities = 168/194 (86%) Strand = Plus / Plus Query: 379 cttgccgccgcacttgagggtgaaggcgatgtcgcagatggggatgcggtgggagtaggg 438 ||||||| |||||||||||||| ||| || ||||||||||||| ||||||| |||||| Sbjct: 3841 cttgccggcgcacttgagggtgtaggtgagctcgcagatggggaggcggtggtcgtaggg 3900 Query: 439 gttggtgacgttgacgtggctgtgcacggtgatggcctcgcgggtcatgcccttgaagct 498 ||||| ||||||||||| |||||||||||||||| ||||||| |||| |||||||| Sbjct: 3901 gttggagacgttgacgttgctgtgcacggtgatgcactcgcggctcatccccttgaacga 3960 Query: 499 caccttgtccagcgtcgcctccggcttgggcatgtgcgcgatcttgtccgccacgaaccc 558 || ||||||||| |||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 3961 caagctgtccagcgacgcctccggctttgggatgtgcgcgatcttctccgccacgaaccc 4020 Query: 559 cttggccttgtcca 572 || |||||||||| Sbjct: 4021 tttcgccttgtcca 4034 Score = 151 bits (76), Expect = 3e-33 Identities = 127/144 (88%) Strand = Plus / Plus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 ||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| Sbjct: 3528 gagcgggatggtgaagttgccgacgatggggaggtcgatggtgaggccgacgtcgagctg 3587 Query: 235 gtagtcgatgtcccagtccctgcccaggtccttcatgagcgagatgaggaagtcgtatgg 294 |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 3588 gtagtcgatgtcccagtcccggcccacgtccttcaccagcgagatgaggaagtcgtaggg 3647 Query: 295 caccttggcgggcacctccagctt 318 | |||||| || | ||||||||| Sbjct: 3648 gatcttggccggtatctccagctt 3671
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 178 bits (90), Expect = 2e-41 Identities = 168/194 (86%) Strand = Plus / Plus Query: 379 cttgccgccgcacttgagggtgaaggcgatgtcgcagatggggatgcggtgggagtaggg 438 ||||||| |||||||||||||| ||| || ||||||||||||| ||||||| |||||| Sbjct: 28849548 cttgccggcgcacttgagggtgtaggtgagctcgcagatggggaggcggtggtcgtaggg 28849607 Query: 439 gttggtgacgttgacgtggctgtgcacggtgatggcctcgcgggtcatgcccttgaagct 498 ||||| ||||||||||| |||||||||||||||| ||||||| |||| |||||||| Sbjct: 28849608 gttggagacgttgacgttgctgtgcacggtgatgcactcgcggctcatccccttgaacga 28849667 Query: 499 caccttgtccagcgtcgcctccggcttgggcatgtgcgcgatcttgtccgccacgaaccc 558 || ||||||||| |||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 28849668 caagctgtccagcgacgcctccggctttgggatgtgcgcgatcttctccgccacgaaccc 28849727 Query: 559 cttggccttgtcca 572 || |||||||||| Sbjct: 28849728 tttcgccttgtcca 28849741 Score = 151 bits (76), Expect = 3e-33 Identities = 127/144 (88%) Strand = Plus / Plus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 ||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| Sbjct: 28849235 gagcgggatggtgaagttgccgacgatggggaggtcgatggtgaggccgacgtcgagctg 28849294 Query: 235 gtagtcgatgtcccagtccctgcccaggtccttcatgagcgagatgaggaagtcgtatgg 294 |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 28849295 gtagtcgatgtcccagtcccggcccacgtccttcaccagcgagatgaggaagtcgtaggg 28849354 Query: 295 caccttggcgggcacctccagctt 318 | |||||| || | ||||||||| Sbjct: 28849355 gatcttggccggtatctccagctt 28849378
>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035N21, complete sequence Length = 128331 Score = 178 bits (90), Expect = 2e-41 Identities = 168/194 (86%) Strand = Plus / Minus Query: 379 cttgccgccgcacttgagggtgaaggcgatgtcgcagatggggatgcggtgggagtaggg 438 ||||||| |||||||||||||| ||| || ||||||||||||| ||||||| |||||| Sbjct: 23920 cttgccggcgcacttgagggtgtaggtgagctcgcagatggggaggcggtggtcgtaggg 23861 Query: 439 gttggtgacgttgacgtggctgtgcacggtgatggcctcgcgggtcatgcccttgaagct 498 ||||| ||||||||||| |||||||||||||||| ||||||| |||| |||||||| Sbjct: 23860 gttggagacgttgacgttgctgtgcacggtgatgcactcgcggctcatccccttgaacga 23801 Query: 499 caccttgtccagcgtcgcctccggcttgggcatgtgcgcgatcttgtccgccacgaaccc 558 || ||||||||| |||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 23800 caagctgtccagcgacgcctccggctttgggatgtgcgcgatcttctccgccacgaaccc 23741 Query: 559 cttggccttgtcca 572 || |||||||||| Sbjct: 23740 tttcgccttgtcca 23727 Score = 151 bits (76), Expect = 3e-33 Identities = 127/144 (88%) Strand = Plus / Minus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 ||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| Sbjct: 24233 gagcgggatggtgaagttgccgacgatggggaggtcgatggtgaggccgacgtcgagctg 24174 Query: 235 gtagtcgatgtcccagtccctgcccaggtccttcatgagcgagatgaggaagtcgtatgg 294 |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 24173 gtagtcgatgtcccagtcccggcccacgtccttcaccagcgagatgaggaagtcgtaggg 24114 Query: 295 caccttggcgggcacctccagctt 318 | |||||| || | ||||||||| Sbjct: 24113 gatcttggccggtatctccagctt 24090
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 379 cttgccgccgcacttgagggtgaaggcgatgtcgcagatggggatgcggtgggagtaggg 438 |||| |||||| ||||| |||| ||| || |||||||||||||||||||| |||||||| Sbjct: 24929303 cttgtcgccgctcttgaaggtgtaggtgagctcgcagatggggatgcggtgcgagtaggg 24929244 Query: 439 gttggtgacgttgacgtggctgtgcacggtgatggcctcgcgggtcatgcccttgaagct 498 |||| |||||| || ||||||||| | |||||| ||||||| | | |||||||||| Sbjct: 24929243 gttgttgacgtcgaggtggctgtggagcgtgatgcactcgcggctgacgcccttgaagga 24929184 Query: 499 caccttgtccagcgtcgcctccggcttgggcatgtgcgcgatcttgtccgccacgaaccc 558 || |||||||||||| || |||||||| || | ||||||||| |||||||||||||| Sbjct: 24929183 gacgcggtccagcgtcgcgtcgggcttggggattttcgcgatcttctccgccacgaaccc 24929124 Query: 559 cttggccttgtcca 572 ||||||| |||||| Sbjct: 24929123 cttggccctgtcca 24929110 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 |||||||||||||||| |||||| || ||||||||||||||||| | ||| ||| | Sbjct: 24929628 gagcgggatggtgaagctgccgacgacggggaggtcgatggtgatcccgacctccagcac 24929569 Query: 235 gtagtcgatgtcccagtccctgcccaggtccttcatgagcgagatgaggaagtcgtatgg 294 |||||||||||||||||||| || || |||||| || ||||| | || ||||||||| || Sbjct: 24929568 gtagtcgatgtcccagtccccgctcacgtccttgatcagcgacacgatgaagtcgtacgg 24929509 Query: 295 cacctt 300 |||||| Sbjct: 24929508 cacctt 24929503 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 |||||| | |||||||||||||| |||||||||||||| |||||| ||| | ||| Sbjct: 6921280 gagcggcagggtgaagttgccgaggatggggaggtcgacggtgaggccgaccctcatctc 6921339 Query: 235 gtagtcgatgtcccagtccctgcc 258 |||||||||||||||||||||||| Sbjct: 6921340 gtagtcgatgtcccagtccctgcc 6921363 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 541 cttgtccgccacgaaccccttggccttgtcca 572 ||||||||||||||||||||| |||||||||| Sbjct: 6921643 cttgtccgccacgaaccccttcgccttgtcca 6921674 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 410 tcgcagatggggatgcggtgggagtaggggttg 442 |||||||| |||||| |||||||||||||||| Sbjct: 6921512 tcgcagatcgggatggagtgggagtaggggttg 6921544
>dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0006C01 Length = 153865 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 379 cttgccgccgcacttgagggtgaaggcgatgtcgcagatggggatgcggtgggagtaggg 438 |||| |||||| ||||| |||| ||| || |||||||||||||||||||| |||||||| Sbjct: 1826 cttgtcgccgctcttgaaggtgtaggtgagctcgcagatggggatgcggtgcgagtaggg 1767 Query: 439 gttggtgacgttgacgtggctgtgcacggtgatggcctcgcgggtcatgcccttgaagct 498 |||| |||||| || ||||||||| | |||||| ||||||| | | |||||||||| Sbjct: 1766 gttgttgacgtcgaggtggctgtggagcgtgatgcactcgcggctgacgcccttgaagga 1707 Query: 499 caccttgtccagcgtcgcctccggcttgggcatgtgcgcgatcttgtccgccacgaaccc 558 || |||||||||||| || |||||||| || | ||||||||| |||||||||||||| Sbjct: 1706 gacgcggtccagcgtcgcgtcgggcttggggattttcgcgatcttctccgccacgaaccc 1647 Query: 559 cttggccttgtcca 572 ||||||| |||||| Sbjct: 1646 cttggccctgtcca 1633 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 |||||||||||||||| |||||| || ||||||||||||||||| | ||| ||| | Sbjct: 2151 gagcgggatggtgaagctgccgacgacggggaggtcgatggtgatcccgacctccagcac 2092 Query: 235 gtagtcgatgtcccagtccctgcccaggtccttcatgagcgagatgaggaagtcgtatgg 294 |||||||||||||||||||| || || |||||| || ||||| | || ||||||||| || Sbjct: 2091 gtagtcgatgtcccagtccccgctcacgtccttgatcagcgacacgatgaagtcgtacgg 2032 Query: 295 cacctt 300 |||||| Sbjct: 2031 cacctt 2026
>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0501G01 Length = 154561 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 379 cttgccgccgcacttgagggtgaaggcgatgtcgcagatggggatgcggtgggagtaggg 438 |||| |||||| ||||| |||| ||| || |||||||||||||||||||| |||||||| Sbjct: 152423 cttgtcgccgctcttgaaggtgtaggtgagctcgcagatggggatgcggtgcgagtaggg 152364 Query: 439 gttggtgacgttgacgtggctgtgcacggtgatggcctcgcgggtcatgcccttgaagct 498 |||| |||||| || ||||||||| | |||||| ||||||| | | |||||||||| Sbjct: 152363 gttgttgacgtcgaggtggctgtggagcgtgatgcactcgcggctgacgcccttgaagga 152304 Query: 499 caccttgtccagcgtcgcctccggcttgggcatgtgcgcgatcttgtccgccacgaaccc 558 || |||||||||||| || |||||||| || | ||||||||| |||||||||||||| Sbjct: 152303 gacgcggtccagcgtcgcgtcgggcttggggattttcgcgatcttctccgccacgaaccc 152244 Query: 559 cttggccttgtcca 572 ||||||| |||||| Sbjct: 152243 cttggccctgtcca 152230 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 |||||||||||||||| |||||| || ||||||||||||||||| | ||| ||| | Sbjct: 152748 gagcgggatggtgaagctgccgacgacggggaggtcgatggtgatcccgacctccagcac 152689 Query: 235 gtagtcgatgtcccagtccctgcccaggtccttcatgagcgagatgaggaagtcgtatgg 294 |||||||||||||||||||| || || |||||| || ||||| | || ||||||||| || Sbjct: 152688 gtagtcgatgtcccagtccccgctcacgtccttgatcagcgacacgatgaagtcgtacgg 152629 Query: 295 cacctt 300 |||||| Sbjct: 152628 cacctt 152623
>gb|AY104771.1| Zea mays PCO087563 mRNA sequence Length = 629 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 378 ccttgccgccgcacttgagggtgaaggcgatgtcgcagatggggatgcggtgggagtagg 437 |||||||| ||| ||||| ||| ||| ||| |||||||||||||||||||| ||||||| Sbjct: 487 ccttgccggcgctcttgaacgtgtaggtgatctcgcagatggggatgcggtgagagtagg 428 Query: 438 ggttggtgacgttgacgtggctgtgca 464 ||||| ||| || ||||||||| |||| Sbjct: 427 ggttgctgatgtcgacgtggctatgca 401 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 235 gtagtcgatgtcccagtccctgcccaggtccttcatgagcgagatgaggaagtcgtatgg 294 ||||||||||||||||||||| || || |||||||| ||||| | || ||||||||| || Sbjct: 627 gtagtcgatgtcccagtcccttccgagatccttcatcagcgacacgatgaagtcgtacgg 568 Query: 295 cacctt 300 |||||| Sbjct: 567 cacctt 562 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 549 ccacgaaccccttggccttgtccagcaggcccgccat 585 ||||||| |||||||||||||||| ||||| ||||| Sbjct: 316 ccacgaagcccttggccttgtccatgaggccggccat 280
>emb|AJ890139.1| Triticum turgidum subsp. durum mRNA for dehydrin (dhn29b gene) Length = 785 Score = 73.8 bits (37), Expect = 6e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 142 gagcgtgggcagcttgaactcgccggcggtctggagcgggatggtgaagttgccgatgat 201 ||||||||| ||||||| ||||||||| | |||||| | ||||||||||||| ||| Sbjct: 529 gagcgtggggagcttgagctcgccggccttggtgagcggcagcgtgaagttgccgacgat 470 Query: 202 ggggaggtcgatggtgagcttgacgaggagctcgtagtcgatgtcccagtccctgcc 258 ||||||||||| |||||| |||| | | ||||||||||| |||||||||| |||| Sbjct: 469 ggggaggtcgacggtgaggccgacgcgcatctcgtagtcgaggtcccagtccttgcc 413 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 539 atcttgtccgccacgaaccccttggccttgtcca 572 ||||| |||||||||||||||||||||||||||| Sbjct: 135 atcttctccgccacgaaccccttggccttgtcca 102 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 410 tcgcagatggggatgcggtgggagtaggggttg 442 ||||||||||||||| ||| |||||||||||| Sbjct: 264 tcgcagatggggatggtgtgcgagtaggggttg 232
>ref|NM_188551.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 456 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 |||||| | |||||||||||||| |||||||||||||| |||||| ||| | ||| Sbjct: 408 gagcggcagggtgaagttgccgaggatggggaggtcgacggtgaggccgaccctcatctc 349 Query: 235 gtagtcgatgtcccagtccctgcc 258 |||||||||||||||||||||||| Sbjct: 348 gtagtcgatgtcccagtccctgcc 325 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 541 cttgtccgccacgaaccccttggccttgtcca 572 ||||||||||||||||||||| |||||||||| Sbjct: 45 cttgtccgccacgaaccccttcgccttgtcca 14 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 410 tcgcagatggggatgcggtgggagtaggggttg 442 |||||||| |||||| |||||||||||||||| Sbjct: 176 tcgcagatcgggatggagtgggagtaggggttg 144
>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492F05 Length = 159242 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 |||||| | |||||||||||||| |||||||||||||| |||||| ||| | ||| Sbjct: 89004 gagcggcagggtgaagttgccgaggatggggaggtcgacggtgaggccgaccctcatctc 89063 Query: 235 gtagtcgatgtcccagtccctgcc 258 |||||||||||||||||||||||| Sbjct: 89064 gtagtcgatgtcccagtccctgcc 89087 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 541 cttgtccgccacgaaccccttggccttgtcca 572 ||||||||||||||||||||| |||||||||| Sbjct: 89367 cttgtccgccacgaaccccttcgccttgtcca 89398 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 410 tcgcagatggggatgcggtgggagtaggggttg 442 |||||||| |||||| |||||||||||||||| Sbjct: 89236 tcgcagatcgggatggagtgggagtaggggttg 89268
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 |||||| | |||||||||||||| |||||||||||||| |||||| ||| | ||| Sbjct: 43098 gagcggcagggtgaagttgccgaggatggggaggtcgacggtgaggccgaccctcatctc 43157 Query: 235 gtagtcgatgtcccagtccctgcc 258 |||||||||||||||||||||||| Sbjct: 43158 gtagtcgatgtcccagtccctgcc 43181 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 541 cttgtccgccacgaaccccttggccttgtcca 572 ||||||||||||||||||||| |||||||||| Sbjct: 43461 cttgtccgccacgaaccccttcgccttgtcca 43492 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 410 tcgcagatggggatgcggtgggagtaggggttg 442 |||||||| |||||| |||||||||||||||| Sbjct: 43330 tcgcagatcgggatggagtgggagtaggggttg 43362
>dbj|AK063645.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-H06, full insert sequence Length = 745 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 175 gagcgggatggtgaagttgccgatgatggggaggtcgatggtgagcttgacgaggagctc 234 |||||| | |||||||||||||| |||||||||||||| |||||| ||| | ||| Sbjct: 605 gagcggcagggtgaagttgccgaggatggggaggtcgacggtgaggccgaccctcatctc 546 Query: 235 gtagtcgatgtcccagtccctgcc 258 |||||||||||||||||||||||| Sbjct: 545 gtagtcgatgtcccagtccctgcc 522 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 410 tcgcagatggggatgcggtgggagtaggggttg 442 |||||||| |||||| |||||||||||||||| Sbjct: 373 tcgcagatcgggatggagtgggagtaggggttg 341
>gb|AE005953.1| Caulobacter crescentus CB15 section 279 of 359 of the complete genome Length = 11527 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 322 cacctcgccgctgtcctcgatcc 344 ||||||||||||||||||||||| Sbjct: 2576 cacctcgccgctgtcctcgatcc 2554
>ref|NM_100029.4| Arabidopsis thaliana LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) AT1G01470 (LEA14) mRNA, complete cds Length = 702 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 ggagctcgtagtcgatgtcccagtcc 253 ||||||||||||| |||||||||||| Sbjct: 452 ggagctcgtagtcaatgtcccagtcc 427
>gb|BT015111.1| Arabidopsis thaliana At1g01470 gene, complete cds Length = 456 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 ggagctcgtagtcgatgtcccagtcc 253 ||||||||||||| |||||||||||| Sbjct: 355 ggagctcgtagtcaatgtcccagtcc 330
>gb|AE009245.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 15 of 187 of the complete sequence Length = 12796 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 496 gctcaccttgtccagcgtcgcc 517 |||||||||||||||||||||| Sbjct: 4400 gctcaccttgtccagcgtcgcc 4421
>gb|AE008368.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 172 of 187 of the complete sequence Length = 13928 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 496 gctcaccttgtccagcgtcgcc 517 |||||||||||||||||||||| Sbjct: 9529 gctcaccttgtccagcgtcgcc 9508
>emb|Y12776.1|ATY12776 Arabidopsis thaliana DNA, 40 kb surrounding ACS1 locus Length = 38483 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 ggagctcgtagtcgatgtcccagtcc 253 ||||||||||||| |||||||||||| Sbjct: 28031 ggagctcgtagtcaatgtcccagtcc 28006
>emb|Y10085.1|ATESTPAP5 Arabidopsis thaliana gene encoding putative desication related protein LEA1 Length = 595 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 ggagctcgtagtcgatgtcccagtcc 253 ||||||||||||| |||||||||||| Sbjct: 371 ggagctcgtagtcaatgtcccagtcc 346
>gb|AY074855.1| Arabidopsis thaliana At1g01470/F22L4_2 mRNA, complete cds Length = 620 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 ggagctcgtagtcgatgtcccagtcc 253 ||||||||||||| |||||||||||| Sbjct: 415 ggagctcgtagtcaatgtcccagtcc 390
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 tccagcttggtcacctcgccgctgtc 336 ||||||||||||||| |||||||||| Sbjct: 3443348 tccagcttggtcaccgcgccgctgtc 3443323
>emb|BX818671.1|CNS0ACFP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 602 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 ggagctcgtagtcgatgtcccagtcc 253 ||||||||||||| |||||||||||| Sbjct: 395 ggagctcgtagtcaatgtcccagtcc 370
>emb|BX818405.1|CNS0ACHP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL77ZC11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 678 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 ggagctcgtagtcgatgtcccagtcc 253 ||||||||||||| |||||||||||| Sbjct: 471 ggagctcgtagtcaatgtcccagtcc 446
>emb|BX841965.1|CNS09Y7C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL67ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 601 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 ggagctcgtagtcgatgtcccagtcc 253 ||||||||||||| |||||||||||| Sbjct: 394 ggagctcgtagtcaatgtcccagtcc 369
>gb|AC061957.3|F22L4 Sequence of BAC F22L4 from Arabidopsis thaliana chromosome 1, complete sequence Length = 66131 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 ggagctcgtagtcgatgtcccagtcc 253 ||||||||||||| |||||||||||| Sbjct: 9503 ggagctcgtagtcaatgtcccagtcc 9528
>gb|DQ306797.1| Hevea brasiliensis isolate SSH68 mRNA sequence Length = 390 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Minus Query: 182 atggtgaagttgccgatgatggggaggtcgatggtgag 219 |||||||||||||| ||||| || ||||| |||||||| Sbjct: 247 atggtgaagttgccaatgataggaaggtcaatggtgag 210
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 536 gcgatcttgtccgccacgaacccct 560 ||||||||| ||||||||||||||| Sbjct: 2616818 gcgatcttgcccgccacgaacccct 2616842
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 aggtcgatggtgagcttgacg 226 ||||||||||||||||||||| Sbjct: 1360987 aggtcgatggtgagcttgacg 1360967
>gb|BC057524.1| Danio rerio hypothetical protein LOC402861, mRNA (cDNA clone IMAGE:5605410), partial cds Length = 1953 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 598 ctcttcctctagcttcttcct 618 ||||||||||||||||||||| Sbjct: 1539 ctcttcctctagcttcttcct 1519 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 598 ctcttcctctagcttcttcct 618 ||||||||||||||||||||| Sbjct: 1449 ctcttcctctagcttcttcct 1429 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 598 ctcttcctctagcttcttcct 618 ||||||||||||||||||||| Sbjct: 1344 ctcttcctctagcttcttcct 1324
>gb|AC100788.8| Homo sapiens chromosome 17, clone CTD-2373H9, complete sequence Length = 126502 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 615 tcctagccccagccccagccc 635 ||||||||||||||||||||| Sbjct: 117 tcctagccccagccccagccc 137
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggtcttggcggagccgccgaagaag 136 ||||||||||||| ||||||||||| Sbjct: 194512 ggtcttggcggagacgccgaagaag 194488
>emb|BX572623.8| Human DNA sequence from clone XXyac-22CH10 on chromosome 1, complete sequence Length = 112168 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 615 tcctagccccagccccagccc 635 ||||||||||||||||||||| Sbjct: 53409 tcctagccccagccccagccc 53389
>gb|AC147643.4| Mus musculus BAC clone RP23-35L23 from chromosome 7, complete sequence Length = 205110 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 615 tcctagccccagccccagccc 635 ||||||||||||||||||||| Sbjct: 188266 tcctagccccagccccagccc 188286
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 363 tgccgctcgccacctccttgccgcc 387 ||||||| ||||||||||||||||| Sbjct: 27296408 tgccgcttgccacctccttgccgcc 27296384
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 363 tgccgctcgccacctccttgccgcc 387 ||||||| ||||||||||||||||| Sbjct: 6578459 tgccgcttgccacctccttgccgcc 6578483
>gb|BC090684.1| Danio rerio hypothetical protein LOC402861, mRNA (cDNA clone IMAGE:6911889), partial cds Length = 1525 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 598 ctcttcctctagcttcttcct 618 ||||||||||||||||||||| Sbjct: 1482 ctcttcctctagcttcttcct 1462 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 598 ctcttcctctagcttcttcct 618 ||||||||||||||||||||| Sbjct: 1377 ctcttcctctagcttcttcct 1357
>gb|AC022966.13| Homo sapiens chromosome 17, clone RP11-323N12, complete sequence Length = 184139 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 615 tcctagccccagccccagccc 635 ||||||||||||||||||||| Sbjct: 182583 tcctagccccagccccagccc 182603
>dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1151D08 Length = 152824 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 363 tgccgctcgccacctccttgccgcc 387 ||||||| ||||||||||||||||| Sbjct: 77129 tgccgcttgccacctccttgccgcc 77153
>emb|AL954299.13| Mouse DNA sequence from clone RP23-399D3 on chromosome 2, complete sequence Length = 142229 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 617 ctagccccagccccagcccga 637 ||||||||||||||||||||| Sbjct: 2226 ctagccccagccccagcccga 2206
>gb|AF045609.1|AF045609 Sinorhizobium meliloti oxidoreductase (ordL) gene, partial cds; and glucose-6-phosphate dehydrogenase (zwf), oxidoreductase (devB), 6-phosphogluconate dehydratase (edd), ATP-binding cassette protein (aglK), alpha-glucosidase (aglA), inner membrane permease (aglG), inner membrane permease (aglF), alpha-glucoside binding protein (aglE), and regulatory protein (aglR) genes, complete cds Length = 15640 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggtcttggcggagccgccgaagaag 136 ||||||||||||| ||||||||||| Sbjct: 10595 ggtcttggcggagacgccgaagaag 10619
>gb|AC127263.4| Mus musculus BAC clone RP24-328P2 from 6, complete sequence Length = 149105 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 615 tcctagccccagccccagccc 635 ||||||||||||||||||||| Sbjct: 81960 tcctagccccagccccagccc 81940
>gb|AC166825.3| Mus musculus BAC clone RP23-368D12 from chromosome 6, complete sequence Length = 182232 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 615 tcctagccccagccccagccc 635 ||||||||||||||||||||| Sbjct: 165150 tcctagccccagccccagccc 165170
>gb|AC164549.4| Mus musculus BAC clone RP24-273K1 from chromosome 16, complete sequence Length = 182658 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 47343 cctagccccagccccagccc 47362
>ref|NM_020959.1| Homo sapiens transmembrane protein 16H (TMEM16H), mRNA Length = 4150 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 3805 cctagccccagccccagccc 3824
>gb|AC147595.10| Mus musculus strain RIII clone mgsriii-p1_7 map 6, complete sequence Length = 90946 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 85806 cctagccccagccccagccc 85825
>ref|NM_001031478.2| Gallus gallus GTPase activating Rap/RanGAP domain-like 4 (GARNL4), mRNA Length = 4734 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cttggtcacctcgccgctgt 335 |||||||||||||||||||| Sbjct: 1696 cttggtcacctcgccgctgt 1677
>gb|BC037307.1| Homo sapiens transmembrane protein 16H, mRNA (cDNA clone IMAGE:5262339), with apparent retained intron Length = 4640 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 4271 cctagccccagccccagccc 4290
>gb|AC160400.12| Mus musculus 6 BAC RP23-321M22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219634 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 12954 cctagccccagccccagccc 12973
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cggagccgccgaagaagtcg 139 |||||||||||||||||||| Sbjct: 2774075 cggagccgccgaagaagtcg 2774094
>gb|AC108321.5| Rattus norvegicus BAC CH230-261E4 (Children's Hospital Oakland Research Institute) complete sequence Length = 196424 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 181137 cctagccccagccccagccc 181118
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cctccagcttggtcacctcg 328 |||||||||||||||||||| Sbjct: 1703575 cctccagcttggtcacctcg 1703594
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ctcgccgctgtcctcgatcc 344 |||||||||||||||||||| Sbjct: 2624812 ctcgccgctgtcctcgatcc 2624831
>ref|XM_598917.2| PREDICTED: Bos taurus similar to family with sequence similarity 62 (C2 domain containing), member A (LOC520669), mRNA Length = 4276 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 617 ctagccccagccccagcccg 636 |||||||||||||||||||| Sbjct: 32 ctagccccagccccagcccg 51
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cggagccgccgaagaagtcg 139 |||||||||||||||||||| Sbjct: 266210 cggagccgccgaagaagtcg 266191
>gb|AC091283.11| Mus musculus chromosome 18, clone RP23-146P1, complete sequence Length = 220804 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 90203 cctagccccagccccagccc 90184
>gb|AC167723.3| Mus musculus BAC RP23-297A10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196622 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 119986 cctagccccagccccagccc 119967
>gb|AC161257.2| Mus musculus BAC clone RP24-91A16 from chromosome 9, complete sequence Length = 245088 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 159093 cctagccccagccccagccc 159074
>gb|AC107865.7| Mus musculus chromosome 1, clone RP23-389C9, complete sequence Length = 204959 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 103161 cctagccccagccccagccc 103180
>gb|AC139245.4| Mus musculus BAC clone RP23-309N16 from chromosome 8, complete sequence Length = 202789 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 150063 cctagccccagccccagccc 150082
>gb|AC128665.4| Mus musculus BAC clone RP24-141K21 from chromosome 18, complete sequence Length = 183285 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 20583 cctagccccagccccagccc 20564
>gb|AC125164.3| Mus musculus BAC clone RP24-423L16 from chromosome 1, complete sequence Length = 133335 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 4595 cctagccccagccccagccc 4576
>gb|AC126457.3| Mus musculus BAC clone RP23-68E6 from 16, complete sequence Length = 147585 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 119854 cctagccccagccccagccc 119873
>gb|AC007032.2| Homo sapiens BAC clone RP11-22N19 from 7, complete sequence Length = 126803 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 90372 cctagccccagccccagccc 90391
>gb|AC109605.14| Mus musculus strain 129S6/SvEvTac clone rp22-470o15 map 11, complete sequence Length = 170397 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 120143 cctagccccagccccagccc 120124
>emb|AL691459.25| Human DNA sequence from clone RP11-543D5 on chromosome 1 Contains four novel genes and a CpG island, complete sequence Length = 139890 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 80822 cctagccccagccccagccc 80803
>emb|AL663123.1| Human DNA sequence from clone RP11-4K3 on chromosome 1 Contains the 3' end of a novel gene (KIAA1037), a novel gene, a SMT3 suppressor of mif two 3 homolog 2 (yeast) (SMT3H2) pseudogene, a novel gene (DKFZP564D0478), an actin, beta (ACTB) pseudogene, the gene for NADPH oxidase-related, C2 domain-containing protein (JFC1), the MAP3K6 gene for mitogen-activated protein kinase kinase kinase 6, the FCN3 gene for ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen) and a CpG island, complete sequence Length = 81740 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 81458 cctagccccagccccagccc 81439 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 81440 cctagccccagccccagccc 81421
>emb|AL590640.19| Human DNA sequence from clone RP11-40H20 on chromosome 1 Contains the 5' end of the SLC9A1 gene for solute carrier family 9 (sodium/hydrogen exchanger), isoform 1 (antiporter, Na+/H+, amiloride sensitive), a ribosomal protein L18a (RPL18A) pseudogene, a novel pseudogene (FLJ20420), a nucleophosmin (nucleolar phosphoprotein B23, numatrin)(NPM1) pseudogene, a mall nuclear ribonucleoprotein polypeptide E (SNRPE) pseudogene, a novel gene, the 5' end of a novel gene (KIAA1037) and a CpG island, complete sequence Length = 147052 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 1718 cctagccccagccccagccc 1699 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 1700 cctagccccagccccagccc 1681
>emb|AL391421.27| Human DNA sequence from clone RP11-126H7 on chromosome 10 Contains the 5' end of the DLG5 gene for discs large (Drosophila) homolog 5 (DLG5) (P-dlg, KIAA0583), a H2A histone family member Z (H2AFZ) pseudogene, a novel gene, the 3' end of the gene for polymerase (RNA) III (DNA directed) (155kD) (RPC155) and a CpG island, complete sequence Length = 168239 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 49449 cctagccccagccccagccc 49468
>gb|AC096310.9| Rattus norvegicus 1 BAC CH230-121B19 (Children's Hospital Oakland Research Institute) complete sequence Length = 218258 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 60767 cctagccccagccccagccc 60748
>gb|AC106606.5| Rattus norvegicus 1 BAC CH230-148J18 (Children's Hospital Oakland Research Institute) complete sequence Length = 227298 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 612 tcttcctagccccagccccagccc 635 |||||| ||||||||||||||||| Sbjct: 57761 tcttcccagccccagccccagccc 57784
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cggagccgccgaagaagtcg 139 |||||||||||||||||||| Sbjct: 43522 cggagccgccgaagaagtcg 43503
>emb|AL663051.15| Mouse DNA sequence from clone RP23-450J13 on chromosome 11 Contains the 5' end of the gene for a novel protein and a CpG island, complete sequence Length = 156183 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gcggtgggagtaggggttgg 443 |||||||||||||||||||| Sbjct: 12652 gcggtgggagtaggggttgg 12671
>emb|AJ719276.1| Gallus gallus mRNA for hypothetical protein, clone 1a20 Length = 4734 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cttggtcacctcgccgctgt 335 |||||||||||||||||||| Sbjct: 1696 cttggtcacctcgccgctgt 1677
>emb|AL512647.14| Mouse DNA sequence from clone RP23-47A2 on chromosome 13 Contains part of a novel gene (6620401C13Rik), complete sequence Length = 199848 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 137825 cctagccccagccccagccc 137806
>gb|DQ099273.1| Arachis hypogaea clone Ah-281 microsatellite sequence Length = 598 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cgccacctccttgccgccgc 389 |||||||||||||||||||| Sbjct: 265 cgccacctccttgccgccgc 284
>gb|AC087530.8| Homo sapiens chromosome 17, clone RP11-313F15, complete sequence Length = 170507 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tgacgtggctgtgcacggtg 469 |||||||||||||||||||| Sbjct: 68750 tgacgtggctgtgcacggtg 68769
>gb|AF352033.1| Homo sapiens DLG5 gene, exons 2 through 32 and complete cds Length = 82500 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 17733 cctagccccagccccagccc 17714
>gb|AC010463.6| Homo sapiens chromosome 19 clone CTD-2278I10, complete sequence Length = 118338 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 50920 cctagccccagccccagccc 50939
>emb|CR616031.1| full-length cDNA clone CS0DF029YN18 of Fetal brain of Homo sapiens (human) Length = 1703 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 1380 cctagccccagccccagccc 1399
>gb|DQ407659.1| Acanthamoeba castellanii swollenin/expansin-like protein mRNA, partial cds Length = 432 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 cacctccagcttggtcacctcgccgctg 334 |||||| || |||||||||||||||||| Sbjct: 375 cacctcgagattggtcacctcgccgctg 348
>gb|AC022240.10| Homo sapiens chromosome 11, clone RP11-231N3, complete sequence Length = 61851 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 615 tcctagccccagccccagcc 634 |||||||||||||||||||| Sbjct: 6273 tcctagccccagccccagcc 6254
>gb|AC074191.3| Homo sapiens chromosome 11 clone RP11-502G22, complete sequence Length = 179357 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 tcctagccccagccccagcc 634 |||||||||||||||||||| Sbjct: 29777 tcctagccccagccccagcc 29796
>gb|AC133012.5| Homo sapiens chromosome 17, clone RP11-582A10, complete sequence Length = 153014 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 tgacgtggctgtgcacggtg 469 |||||||||||||||||||| Sbjct: 103301 tgacgtggctgtgcacggtg 103282
>gb|AC013447.4|AC013447 Homo sapiens BAC clone RP11-543D5 from 1, complete sequence Length = 166143 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 107076 cctagccccagccccagccc 107057
>gb|AF244696.1|AF244696 Zea mays glutathione S-transferase GST 31 mRNA, complete cds Length = 934 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 ccttggccttgtccagcagg 577 |||||||||||||||||||| Sbjct: 612 ccttggccttgtccagcagg 593
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 gccccagccccagcccgatc 639 |||||||||||||||||||| Sbjct: 93954 gccccagccccagcccgatc 93935
>gb|AC133638.7| Homo sapiens chromosome 17, clone CTD-2125J20, complete sequence Length = 139560 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 tgacgtggctgtgcacggtg 469 |||||||||||||||||||| Sbjct: 136525 tgacgtggctgtgcacggtg 136506
>gb|AC090286.16| Homo sapiens chromosome 17, clone RP11-28B23, complete sequence Length = 168956 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 612 tcttcctagccccagccccagccc 635 |||||| ||||||||||||||||| Sbjct: 633 tcttcccagccccagccccagccc 656
>gb|AC090244.17| Homo sapiens chromosome 18, clone RP11-758N17, complete sequence Length = 169144 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 417 tggggatgcggtgggagtaggggt 440 |||||||| ||||||||||||||| Sbjct: 82399 tggggatggggtgggagtaggggt 82376
>gb|AC003957.1|AC003957 Homo sapiens chromosome 17, clone hCIT.457_L_16, complete sequence Length = 126581 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 612 tcttcctagccccagccccagccc 635 |||||| ||||||||||||||||| Sbjct: 29142 tcttcccagccccagccccagccc 29165
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tggcctcctcggtggtcttg 118 |||||||||||||||||||| Sbjct: 1883984 tggcctcctcggtggtcttg 1884003
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gccgccgaagaagtcgctga 143 |||||||||||||||||||| Sbjct: 808200 gccgccgaagaagtcgctga 808181
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 gcgggtcatgcccttgaagc 497 |||||||||||||||||||| Sbjct: 2044085 gcgggtcatgcccttgaagc 2044066
>gb|AY103844.1| Zea mays PCO132874 mRNA sequence Length = 1008 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 ccttggccttgtccagcagg 577 |||||||||||||||||||| Sbjct: 624 ccttggccttgtccagcagg 605
>gb|AC159739.3| Mus musculus BAC clone RP23-442O9 from chromosome 9, complete sequence Length = 207308 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 150402 cctagccccagccccagccc 150383
>gb|AC104324.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-177j21, complete sequence Length = 193277 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 123663 cctagccccagccccagccc 123682
>gb|AC174927.2| Mus musculus BAC clone RP24-325L16 from chromosome 9, complete sequence Length = 195951 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 24851 cctagccccagccccagccc 24832
>emb|AJ009617.5|HSAJ9617 Homo sapiens chromosome 17 sequence from PAC RP1-149D14 and cosmid 40M01, complete sequence Length = 153609 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 612 tcttcctagccccagccccagccc 635 |||||| ||||||||||||||||| Sbjct: 68982 tcttcccagccccagccccagccc 69005
>gb|AC140466.3| Mus musculus BAC clone RP24-392F9 from 6, complete sequence Length = 148392 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 25356 cctagccccagccccagccc 25337
>gb|AC134899.4| Mus musculus BAC clone RP24-81B7 from 6, complete sequence Length = 197316 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 9406 cctagccccagccccagccc 9387
>emb|AL607086.19| Mouse DNA sequence from clone RP23-269B7 on chromosome 4, complete sequence Length = 193830 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 43999 cctagccccagccccagccc 44018
>emb|AL359681.5|CNS05TEZ Human chromosome 14 DNA sequence BAC C-2348N10 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 104782 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 44746 cctagccccagccccagccc 44727
>emb|AL663030.12| Mouse DNA sequence from clone RP23-84C12 on chromosome 11, complete sequence Length = 212085 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 163458 cctagccccagccccagccc 163477
>emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chromosome 15, complete sequence Length = 236344 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 77118 cctagccccagccccagccc 77137
>emb|AL583887.9| Mouse DNA sequence from clone RP23-121M7 on chromosome 15, complete sequence Length = 220050 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 887 cctagccccagccccagccc 868
>gb|AC105030.11| Homo sapiens chromosome 17, clone CTD-2244F11, complete sequence Length = 107848 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 608 agcttcttcctagccccagccccagccc 635 |||||||||| ||||||||||| ||||| Sbjct: 15371 agcttcttcccagccccagccctagccc 15344
>emb|AL773527.8| Pig DNA sequence from clone XX-707F1, complete sequence Length = 137286 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ccagtccctgcccaggtcct 266 |||||||||||||||||||| Sbjct: 14981 ccagtccctgcccaggtcct 14962
>emb|AL672231.7| Mouse DNA sequence from clone RP23-54C14 on chromosome X, complete sequence Length = 109110 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 55625 cctagccccagccccagccc 55606
>dbj|AB046843.2| Homo sapiens mRNA for KIAA1623 protein, partial cds Length = 4150 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 cctagccccagccccagccc 635 |||||||||||||||||||| Sbjct: 3805 cctagccccagccccagccc 3824 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,228,041 Number of Sequences: 3902068 Number of extensions: 4228041 Number of successful extensions: 103668 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101994 Number of HSP's gapped (non-prelim): 1664 length of query: 651 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 628 effective length of database: 17,143,297,704 effective search space: 10765990958112 effective search space used: 10765990958112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
