ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13j22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483845.1| Oryza sativa (japonica cultivar-group), mRNA 280 6e-72
2dbj|AK104887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 6e-72
3dbj|AK067804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 6e-72
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
5dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
6emb|BX826790.1|CNS0A39V Arabidopsis thaliana Full-length cDNA Co... 76 2e-10
7emb|BX826398.1|CNS0A382 Arabidopsis thaliana Full-length cDNA Co... 68 4e-08
8gb|AY817111.1| Lycopersicon cheesmaniae peroxisomal acyl-CoA oxi... 64 6e-07
9emb|BX826803.1|CNS0A34N Arabidopsis thaliana Full-length cDNA Co... 62 3e-06
10ref|NM_119014.3| Arabidopsis thaliana kinase/ ribokinase AT4G287... 60 1e-05
11ref|NM_202903.1| Arabidopsis thaliana kinase/ ribokinase AT4G287... 60 1e-05
12ref|NM_179135.2| Arabidopsis thaliana kinase/ ribokinase AT4G287... 60 1e-05
13gb|AY128740.1| Arabidopsis thaliana unknown protein (At4g28706) ... 60 1e-05
14gb|AY125545.1| Arabidopsis thaliana At4g29227 mRNA, complete cds 60 1e-05
15gb|AY065095.1| Arabidopsis thaliana unknown protein mRNA, comple... 60 1e-05
16gb|AF428378.1|AF428378 Arabidopsis thaliana At4g29227 mRNA, comp... 60 1e-05
17emb|BX827195.1|CNS0A3CY Arabidopsis thaliana Full-length cDNA Co... 60 1e-05
18emb|BX826400.1|CNS0A38O Arabidopsis thaliana Full-length cDNA Co... 60 1e-05
19emb|BX828281.1|CNS0A2ZJ Arabidopsis thaliana Full-length cDNA Co... 60 1e-05
20emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, ... 56 2e-04
21emb|AL035353.1|ATF16A16 Arabidopsis thaliana DNA chromosome 4, B... 56 2e-04
22emb|BX828814.1|CNS0A2Q5 Arabidopsis thaliana Full-length cDNA Co... 54 6e-04
23dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete ge... 54 6e-04
24emb|BX826544.1|CNS0A3A8 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
25gb|AE006394.1| Lactococcus lactis subsp. lactis IL1403 section 1... 44 0.59
26gb|DQ352559.1| Thermotoga sp. RQ7, DNA joint XIII-XIII' sequence 44 0.59
27gb|DQ352558.1| Thermotoga neapolitana NS-E, DNA joint XIII-XIII'... 44 0.59
28gb|U64817.1|LEU64817 Lycopersicon esculentum fructokinase (Frk1)... 44 0.59
29gb|CP000114.1| Streptococcus agalactiae A909, complete genome 42 2.3
30gb|AC125155.4| Mus musculus BAC clone RP24-380D9 from chromosome... 42 2.3
31emb|AL591890.31| Human DNA sequence from clone RP11-54A22 on chr... 42 2.3
32gb|AE014196.1| Streptococcus agalactiae 2603V/R section 6 of 100... 42 2.3
33emb|AL766843.1|SAG766843 Streptococcus agalactiae NEM316 complet... 42 2.3
34gb|AC093832.2| Homo sapiens BAC clone RP11-402L11 from 4, comple... 42 2.3
35gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome 42 2.3
36ref|NM_115810.2| Arabidopsis thaliana kinase/ ribokinase AT3G594... 40 9.2
37gb|AC175380.2| Mus musculus BAC clone RP24-333L5 from chromosome... 40 9.2
38gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, compl... 40 9.2
39gb|AC004926.2| Homo sapiens PAC clone RP5-910H9 from 7, complete... 40 9.2
40emb|AL162576.27| Human DNA sequence from clone RP11-568F20 on ch... 40 9.2
41emb|AL118513.17|HSDJ685L9 Human DNA sequence from clone RP4-685L... 40 9.2
42ref|XM_776308.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.2
43gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 40 9.2
44emb|X52543.1|SAAGRAB S.aureus agrA, agrB and hld genes 40 9.2
45emb|AL356014.1|ATF25L23 Arabidopsis thaliana DNA chromosome 3, B... 40 9.2
46emb|AL138659.1|ATT16L24 Arabidopsis thaliana DNA chromosome 3, B... 40 9.2
47gb|AC069216.13| Homo sapiens 3 BAC RP11-621D6 (Roswell Park Canc... 40 9.2
48gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 40 9.2
49gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 40 9.2
50gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 40 9.2
51gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 40 9.2
52gb|AY086378.1| Arabidopsis thaliana clone 24751 mRNA, complete s... 40 9.2
53dbj|AP002039.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 9.2
54gb|AF190793.1|AF190793 Hypocrea jecorina Cys2-His2 zinc finger t... 40 9.2
55dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complet... 40 9.2
56gb|AC135673.5| Mus musculus BAC clone RP24-279A17 from 16, compl... 40 9.2
57gb|DQ157977.1| Staphylococcus aureus strain HT2001634 putative C... 40 9.2
58gb|DQ157958.1| Staphylococcus aureus strain E228 putative C-N hy... 40 9.2 
>ref|XM_483845.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1627

 Score =  280 bits (141), Expect = 6e-72
 Identities = 339/405 (83%)
 Strand = Plus / Minus

                                                                        
Query: 264  gatgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctg 323
            |||| |||||| ||||||  ||||| ||| | ||||| |||||||| |||||||| ||||
Sbjct: 1218 gatggggaagagcagtccgagcccctaaacccctgcacccgcaagcagccacttgagctg 1159

                                                                        
Query: 324  cgaaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaa 383
            | ||||||| ||||||||||   |||||||| | ||||||||| || ||||| ||||| |
Sbjct: 1158 caaaaggcagcatcttctcaggcggcatgccagagcataaaccgtagagaactgctccga 1099

                                                                        
Query: 384  tgaatgcatcacctgcaccagttgtatctatgagctcttcagagggtatagcttcagctg 443
            | ||||||||||| ||||||||||||||||||||||||||||||||||||  ||| || |
Sbjct: 1098 taaatgcatcacccgcaccagttgtatctatgagctcttcagagggtataatttcggcag 1039

                                                                        
Query: 444  tacccaaaagtaacctgccactcatcgaaccaacgccatctgcacttattctcaaatttg 503
            | || |||||||| |||||||| || || || |  |||||||||||||||||||||||||
Sbjct: 1038 tgcctaaaagtaatctgccactgatggatcctattccatctgcacttattctcaaatttg 979

                                                                        
Query: 504  acttggaagcaatgcattttgccatgctagaactcaaatcgactttctgctctaaagatt 563
            ||||||| || |||||||||| |||||| ||||||||| |  |||||| |||||  ||||
Sbjct: 978  acttggaggcgatgcattttggcatgcttgaactcaaaacttctttcttctctagtgatt 919

                                                                        
Query: 564  ctagcagatcctctacatcactttcctcggtctcagaagcatctgtcatacttctttcaa 623
            | || |||  |||||||||  ||||||| | |||||||||||||||  | ||||||||||
Sbjct: 918  ccagaagactctctacatctatttcctctgcctcagaagcatctgttgtgcttctttcaa 859

                                                         
Query: 624  gcattaagcaacctttctcgccccgggttacaataacgaacttga 668
            |||| ||||| || || || ||  ||||||||||||  |||||||
Sbjct: 858  gcatcaagcatcccttttctccaagggttacaataataaacttga 814
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>dbj|AK104887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B05, full
           insert sequence
          Length = 901

 Score =  280 bits (141), Expect = 6e-72
 Identities = 339/405 (83%)
 Strand = Plus / Minus

                                                                       
Query: 264 gatgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctg 323
           |||| |||||| ||||||  ||||| ||| | ||||| |||||||| |||||||| ||||
Sbjct: 643 gatggggaagagcagtccgagcccctaaacccctgcacccgcaagcagccacttgagctg 584

                                                                       
Query: 324 cgaaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaa 383
           | ||||||| ||||||||||   |||||||| | ||||||||| || ||||| ||||| |
Sbjct: 583 caaaaggcagcatcttctcaggcggcatgccagagcataaaccgtagagaactgctccga 524

                                                                       
Query: 384 tgaatgcatcacctgcaccagttgtatctatgagctcttcagagggtatagcttcagctg 443
           | ||||||||||| ||||||||||||||||||||||||||||||||||||  ||| || |
Sbjct: 523 taaatgcatcacccgcaccagttgtatctatgagctcttcagagggtataatttcggcag 464

                                                                       
Query: 444 tacccaaaagtaacctgccactcatcgaaccaacgccatctgcacttattctcaaatttg 503
           | || |||||||| |||||||| || || || |  |||||||||||||||||||||||||
Sbjct: 463 tgcctaaaagtaatctgccactgatggatcctattccatctgcacttattctcaaatttg 404

                                                                       
Query: 504 acttggaagcaatgcattttgccatgctagaactcaaatcgactttctgctctaaagatt 563
           ||||||| || |||||||||| |||||| ||||||||| |  |||||| |||||  ||||
Sbjct: 403 acttggaggcgatgcattttggcatgcttgaactcaaaacttctttcttctctagtgatt 344

                                                                       
Query: 564 ctagcagatcctctacatcactttcctcggtctcagaagcatctgtcatacttctttcaa 623
           | || |||  |||||||||  ||||||| | |||||||||||||||  | ||||||||||
Sbjct: 343 ccagaagactctctacatctatttcctctgcctcagaagcatctgttgtgcttctttcaa 284

                                                        
Query: 624 gcattaagcaacctttctcgccccgggttacaataacgaacttga 668
           |||| ||||| || || || ||  ||||||||||||  |||||||
Sbjct: 283 gcatcaagcatcccttttctccaagggttacaataataaacttga 239
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>dbj|AK067804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119N07, full
            insert sequence
          Length = 1627

 Score =  280 bits (141), Expect = 6e-72
 Identities = 339/405 (83%)
 Strand = Plus / Minus

                                                                        
Query: 264  gatgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctg 323
            |||| |||||| ||||||  ||||| ||| | ||||| |||||||| |||||||| ||||
Sbjct: 1218 gatggggaagagcagtccgagcccctaaacccctgcacccgcaagcagccacttgagctg 1159

                                                                        
Query: 324  cgaaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaa 383
            | ||||||| ||||||||||   |||||||| | ||||||||| || ||||| ||||| |
Sbjct: 1158 caaaaggcagcatcttctcaggcggcatgccagagcataaaccgtagagaactgctccga 1099

                                                                        
Query: 384  tgaatgcatcacctgcaccagttgtatctatgagctcttcagagggtatagcttcagctg 443
            | ||||||||||| ||||||||||||||||||||||||||||||||||||  ||| || |
Sbjct: 1098 taaatgcatcacccgcaccagttgtatctatgagctcttcagagggtataatttcggcag 1039

                                                                        
Query: 444  tacccaaaagtaacctgccactcatcgaaccaacgccatctgcacttattctcaaatttg 503
            | || |||||||| |||||||| || || || |  |||||||||||||||||||||||||
Sbjct: 1038 tgcctaaaagtaatctgccactgatggatcctattccatctgcacttattctcaaatttg 979

                                                                        
Query: 504  acttggaagcaatgcattttgccatgctagaactcaaatcgactttctgctctaaagatt 563
            ||||||| || |||||||||| |||||| ||||||||| |  |||||| |||||  ||||
Sbjct: 978  acttggaggcgatgcattttggcatgcttgaactcaaaacttctttcttctctagtgatt 919

                                                                        
Query: 564  ctagcagatcctctacatcactttcctcggtctcagaagcatctgtcatacttctttcaa 623
            | || |||  |||||||||  ||||||| | |||||||||||||||  | ||||||||||
Sbjct: 918  ccagaagactctctacatctatttcctctgcctcagaagcatctgttgtgcttctttcaa 859

                                                         
Query: 624  gcattaagcaacctttctcgccccgggttacaataacgaacttga 668
            |||| ||||| || || || ||  ||||||||||||  |||||||
Sbjct: 858  gcatcaagcatcccttttctccaagggttacaataataaacttga 814
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                            
Query: 371      agaacggctccaatgaatgcatcacctgcaccagttgtatctatgagctcttcagagggt 430
                ||||| ||||| || ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 28367289 agaactgctccgataaatgcatcacccgcaccagttgtatctatgagctcttcagagggt 28367230

                                                                            
Query: 431      atagcttcagctgtacccaaaagtaacctgccactcatcgaaccaacgccatctgcactt 490
                |||  ||| || || || |||||||| |||||||| || || || |  ||||||||||||
Sbjct: 28367229 ataatttcggcagtgcctaaaagtaatctgccactgatggatcctattccatctgcactt 28367170

                                
Query: 491      attctcaaatttgact 506
                ||||||||||||||||
Sbjct: 28367169 attctcaaatttgact 28367154



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                            
Query: 505      cttggaagcaatgcattttgccatgctagaactcaaatcgactttctgctctaaagattc 564
                |||||| || |||||||||| |||||| ||||||||| |  |||||| |||||  |||||
Sbjct: 28366831 cttggaggcgatgcattttggcatgcttgaactcaaaacttctttcttctctagtgattc 28366772

                                                            
Query: 565      tagcagatcctctacatcactttcctcggtctcagaagcatctg 608
                 || |||  |||||||||  ||||||| | ||||||||||||||
Sbjct: 28366771 cagaagactctctacatctatttcctctgcctcagaagcatctg 28366728
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>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0044E16
          Length = 153296

 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                         
Query: 371   agaacggctccaatgaatgcatcacctgcaccagttgtatctatgagctcttcagagggt 430
             ||||| ||||| || ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 96095 agaactgctccgataaatgcatcacccgcaccagttgtatctatgagctcttcagagggt 96036

                                                                         
Query: 431   atagcttcagctgtacccaaaagtaacctgccactcatcgaaccaacgccatctgcactt 490
             |||  ||| || || || |||||||| |||||||| || || || |  ||||||||||||
Sbjct: 96035 ataatttcggcagtgcctaaaagtaatctgccactgatggatcctattccatctgcactt 95976

                             
Query: 491   attctcaaatttgact 506
             ||||||||||||||||
Sbjct: 95975 attctcaaatttgact 95960



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                         
Query: 505   cttggaagcaatgcattttgccatgctagaactcaaatcgactttctgctctaaagattc 564
             |||||| || |||||||||| |||||| ||||||||| |  |||||| |||||  |||||
Sbjct: 95637 cttggaggcgatgcattttggcatgcttgaactcaaaacttctttcttctctagtgattc 95578

                                                         
Query: 565   tagcagatcctctacatcactttcctcggtctcagaagcatctg 608
              || |||  |||||||||  ||||||| | ||||||||||||||
Sbjct: 95577 cagaagactctctacatctatttcctctgcctcagaagcatctg 95534
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>emb|BX826790.1|CNS0A39V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB63ZB06 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1327

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 128/158 (81%)
 Strand = Plus / Minus

                                                                        
Query: 266  tgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctgcg 325
            ||||||||||| || |  ||||||||||| | ||||| |||| | |||||||| || || 
Sbjct: 1205 tgaggaagacccgtgcgagcccccaaagcccggcagcagcaaccagccacttgagcagca 1146

                                                                        
Query: 326  aaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaatg 385
            || || ||||| |||||    |||||||||| ||||| | |||||||||| ||||| |||
Sbjct: 1145 aatggtaacattttctctgggggcatgccggcgcatatagcatatagaacagctcctatg 1086

                                                  
Query: 386  aatgcatcacctgcaccagttgtatctatgagctcttc 423
            |||||||| || |||||||| || ||||  ||||||||
Sbjct: 1085 aatgcatcgccagcaccagtggtgtctacaagctcttc 1048
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>emb|BX826398.1|CNS0A382 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZD03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 389

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 127/158 (80%)
 Strand = Plus / Minus

                                                                       
Query: 266 tgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctgcg 325
           ||||||||||| || |  || |||||||| | |||||||||| | |||||||| || || 
Sbjct: 229 tgaggaagacccgtgcgagctcccaaagcccggcagccgcaaccagccacttgagcagca 170

                                                                       
Query: 326 aaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaatg 385
           || || ||||| |||||    |||||||||| |||||   |||||||||| ||||| |||
Sbjct: 169 aatggtaacattttctctgggggcatgccggcgcatatggcatatagaacagctcctatg 110

                                                 
Query: 386 aatgcatcacctgcaccagttgtatctatgagctcttc 423
           |||||||| || |||||||| || ||||  ||||||||
Sbjct: 109 aatgcatcgccagcaccagtggtgtctacaagctcttc 72
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>gb|AY817111.1| Lycopersicon cheesmaniae peroxisomal acyl-CoA oxidase 1A (Acx1A)
            gene, complete cds
          Length = 30000

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                            
Query: 364  accatatagaacggctccaatgaatgcatcacctgcaccagttgtatc 411
            |||||| ||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 2790 accatacagaactgctccaataaatgcatcacctgcaccggttgtatc 2837
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>emb|BX826803.1|CNS0A34N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB64ZB10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1265

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 112/139 (80%)
 Strand = Plus / Minus

                                                                        
Query: 285  cccccaaagctctgcagccgcaagcggccacttgtgctgcgaaaggcaacatcttctcaa 344
            |||||||||| | ||||| |||| | |||||||| || || || || ||||| |||||  
Sbjct: 1103 cccccaaagcccggcagcagcaaccagccacttgagcagcaaatggtaacattttctctg 1044

                                                                        
Query: 345  ctggcatgccggtgcataaaccatatagaacggctccaatgaatgcatcacctgcaccag 404
              |||||||||| |||||   |||||||||| ||||| ||||||||||| || |||||||
Sbjct: 1043 gcggcatgccggcgcatatcgcatatagaacagctcctatgaatgcatcgccagcaccag 984

                               
Query: 405  ttgtatctatgagctcttc 423
            | || ||||  ||||||||
Sbjct: 983  tagtgtctacaagctcttc 965
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>ref|NM_119014.3| Arabidopsis thaliana kinase/ ribokinase AT4G28706 transcript variant
            AT4G28706.1 mRNA, complete cds
          Length = 1379

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 126/158 (79%)
 Strand = Plus / Minus

                                                                        
Query: 266  tgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctgcg 325
            ||||||||||| || |  || |||||||| | ||||| |||| | |||||||| || || 
Sbjct: 1219 tgaggaagacccgtgcgagctcccaaagcccggcagctgcaaccagccacttgagcagca 1160

                                                                        
Query: 326  aaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaatg 385
            || || ||||| |||||    |||||||||| |||||   |||||||||| ||||| |||
Sbjct: 1159 aatggtaacattttctctgggggcatgccggcgcatatggcatatagaacagctcctatg 1100

                                                  
Query: 386  aatgcatcacctgcaccagttgtatctatgagctcttc 423
            |||||||| || |||||||| || ||||  ||||||||
Sbjct: 1099 aatgcatcgccagcaccagtggtgtctacaagctcttc 1062
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>ref|NM_202903.1| Arabidopsis thaliana kinase/ ribokinase AT4G28706 transcript variant
            AT4G28706.3 mRNA, complete cds
          Length = 1385

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 126/158 (79%)
 Strand = Plus / Minus

                                                                        
Query: 266  tgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctgcg 325
            ||||||||||| || |  || |||||||| | ||||| |||| | |||||||| || || 
Sbjct: 1225 tgaggaagacccgtgcgagctcccaaagcccggcagctgcaaccagccacttgagcagca 1166

                                                                        
Query: 326  aaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaatg 385
            || || ||||| |||||    |||||||||| |||||   |||||||||| ||||| |||
Sbjct: 1165 aatggtaacattttctctgggggcatgccggcgcatatggcatatagaacagctcctatg 1106

                                                  
Query: 386  aatgcatcacctgcaccagttgtatctatgagctcttc 423
            |||||||| || |||||||| || ||||  ||||||||
Sbjct: 1105 aatgcatcgccagcaccagtggtgtctacaagctcttc 1068
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>ref|NM_179135.2| Arabidopsis thaliana kinase/ ribokinase AT4G28706 transcript variant
            AT4G28706.2 mRNA, complete cds
          Length = 1388

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 126/158 (79%)
 Strand = Plus / Minus

                                                                        
Query: 266  tgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctgcg 325
            ||||||||||| || |  || |||||||| | ||||| |||| | |||||||| || || 
Sbjct: 1228 tgaggaagacccgtgcgagctcccaaagcccggcagctgcaaccagccacttgagcagca 1169

                                                                        
Query: 326  aaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaatg 385
            || || ||||| |||||    |||||||||| |||||   |||||||||| ||||| |||
Sbjct: 1168 aatggtaacattttctctgggggcatgccggcgcatatggcatatagaacagctcctatg 1109

                                                  
Query: 386  aatgcatcacctgcaccagttgtatctatgagctcttc 423
            |||||||| || |||||||| || ||||  ||||||||
Sbjct: 1108 aatgcatcgccagcaccagtggtgtctacaagctcttc 1071
to top
>gb|AY128740.1| Arabidopsis thaliana unknown protein (At4g28706) mRNA, complete cds
          Length = 1273

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 126/158 (79%)
 Strand = Plus / Minus

                                                                        
Query: 266  tgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctgcg 325
            ||||||||||| || |  || |||||||| | ||||| |||| | |||||||| || || 
Sbjct: 1178 tgaggaagacccgtgcgagctcccaaagcccggcagctgcaaccagccacttgagcagca 1119

                                                                        
Query: 326  aaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaatg 385
            || || ||||| |||||    |||||||||| |||||   |||||||||| ||||| |||
Sbjct: 1118 aatggtaacattttctctgggggcatgccggcgcatatggcatatagaacagctcctatg 1059

                                                  
Query: 386  aatgcatcacctgcaccagttgtatctatgagctcttc 423
            |||||||| || |||||||| || ||||  ||||||||
Sbjct: 1058 aatgcatcgccagcaccagtggtgtctacaagctcttc 1021
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>gb|AY125545.1| Arabidopsis thaliana At4g29227 mRNA, complete cds
          Length = 1206

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 126/158 (79%)
 Strand = Plus / Minus

                                                                        
Query: 266  tgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctgcg 325
            ||||||||||| || |  || |||||||| | ||||| |||| | |||||||| || || 
Sbjct: 1169 tgaggaagacccgtgcgagctcccaaagcccggcagctgcaaccagccacttgagcagca 1110

                                                                        
Query: 326  aaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaatg 385
            || || ||||| |||||    |||||||||| |||||   |||||||||| ||||| |||
Sbjct: 1109 aatggtaacattttctctgggggcatgccggcgcatatggcatatagaacagctcctatg 1050

                                                  
Query: 386  aatgcatcacctgcaccagttgtatctatgagctcttc 423
            |||||||| || |||||||| || ||||  ||||||||
Sbjct: 1049 aatgcatcgccagcaccagtggtgtctacaagctcttc 1012
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>gb|AY065095.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 1384

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 126/158 (79%)
 Strand = Plus / Minus

                                                                        
Query: 266  tgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctgcg 325
            ||||||||||| || |  || |||||||| | ||||| |||| | |||||||| || || 
Sbjct: 1228 tgaggaagacccgtgcgagctcccaaagcccggcagctgcaaccagccacttgagcagca 1169

                                                                        
Query: 326  aaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaatg 385
            || || ||||| |||||    |||||||||| |||||   |||||||||| ||||| |||
Sbjct: 1168 aatggtaacattttctctgggggcatgccggcgcatatggcatatagaacagctcctatg 1109

                                                  
Query: 386  aatgcatcacctgcaccagttgtatctatgagctcttc 423
            |||||||| || |||||||| || ||||  ||||||||
Sbjct: 1108 aatgcatcgccagcaccagtggtgtctacaagctcttc 1071
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>gb|AF428378.1|AF428378 Arabidopsis thaliana At4g29227 mRNA, complete cds
          Length = 1378

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 126/158 (79%)
 Strand = Plus / Minus

                                                                        
Query: 266  tgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctgcg 325
            ||||||||||| || |  || |||||||| | ||||| |||| | |||||||| || || 
Sbjct: 1219 tgaggaagacccgtgcgagctcccaaagcccggcagctgcaaccagccacttgagcagca 1160

                                                                        
Query: 326  aaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaatg 385
            || || ||||| |||||    |||||||||| |||||   |||||||||| ||||| |||
Sbjct: 1159 aatggtaacattttctctgggggcatgccggcgcatatggcatatagaacagctcctatg 1100

                                                  
Query: 386  aatgcatcacctgcaccagttgtatctatgagctcttc 423
            |||||||| || |||||||| || ||||  ||||||||
Sbjct: 1099 aatgcatcgccagcaccagtggtgtctacaagctcttc 1062
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>emb|BX827195.1|CNS0A3CY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS20ZH01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1343

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 126/158 (79%)
 Strand = Plus / Minus

                                                                        
Query: 266  tgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctgcg 325
            ||||||||||| || |  || |||||||| | ||||| |||| | |||||||| || || 
Sbjct: 1222 tgaggaagacccgtgcgagctcccaaagcccggcagctgcaaccagccacttgagcagca 1163

                                                                        
Query: 326  aaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaatg 385
            || || ||||| |||||    |||||||||| |||||   |||||||||| ||||| |||
Sbjct: 1162 aatggtaacattttctctgggggcatgccggcgcatatggcatatagaacagctcctatg 1103

                                                  
Query: 386  aatgcatcacctgcaccagttgtatctatgagctcttc 423
            |||||||| || |||||||| || ||||  ||||||||
Sbjct: 1102 aatgcatcgccagcaccagtggtgtctacaagctcttc 1065
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>emb|BX826400.1|CNS0A38O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZE03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 389

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 126/158 (79%)
 Strand = Plus / Minus

                                                                       
Query: 266 tgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctgcg 325
           ||||||||||| || |  || |||||||| | ||||| |||| | |||||||| || || 
Sbjct: 229 tgaggaagacccgtgcgagctcccaaagcccggcagctgcaaccagccacttgagcagca 170

                                                                       
Query: 326 aaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaatg 385
           || || ||||| |||||    |||||||||| |||||   |||||||||| ||||| |||
Sbjct: 169 aatggtaacattttctctgggggcatgccggcgcatatggcatatagaacagctcctatg 110

                                                 
Query: 386 aatgcatcacctgcaccagttgtatctatgagctcttc 423
           |||||||| || |||||||| || ||||  ||||||||
Sbjct: 109 aatgcatcgccagcaccagtggtgtctacaagctcttc 72
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>emb|BX828281.1|CNS0A2ZJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH70ZF05 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1319

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 126/158 (79%)
 Strand = Plus / Minus

                                                                        
Query: 266  tgaggaagaccagtcctggcccccaaagctctgcagccgcaagcggccacttgtgctgcg 325
            ||||||||||| || |  || |||||||| | ||||| |||| | |||||||| || || 
Sbjct: 1201 tgaggaagacccgtgcgagctcccaaagcccggcagctgcaaccagccacttgagcagca 1142

                                                                        
Query: 326  aaaggcaacatcttctcaactggcatgccggtgcataaaccatatagaacggctccaatg 385
            || || ||||| |||||    |||||||||| |||||   |||||||||| ||||| |||
Sbjct: 1141 aatggtaacattttctctgggggcatgccggcgcatatggcatatagaacagctcctatg 1082

                                                  
Query: 386  aatgcatcacctgcaccagttgtatctatgagctcttc 423
            |||||||| || |||||||| || ||||  ||||||||
Sbjct: 1081 aatgcatcgccagcaccagtggtgtctacaagctcttc 1044
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>emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 69
          Length = 197655

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                         
Query: 364   accatatagaacggctccaatgaatgcatcacctgcaccagttgtatctatgagctcttc 423
             |||||||||||| ||||| ||||||||||| || |||||||| || ||||  ||||||||
Sbjct: 90818 accatatagaacagctcctatgaatgcatcgccagcaccagtggtgtctacaagctcttc 90759
to top
>emb|AL035353.1|ATF16A16 Arabidopsis thaliana DNA chromosome 4, BAC clone  F16A16 (ESSAII
             project)
          Length = 97155

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 364   accatatagaacggctccaatgaatgcatcacctgcaccagttgtatctatgagctcttc 423
             |||||||||||| ||||| ||||||||||| || |||||||| || ||||  ||||||||
Sbjct: 86249 accatatagaacagctcctatgaatgcatcgccagcaccagtggtgtctacaagctcttc 86308
to top
>emb|BX828814.1|CNS0A2Q5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL41ZA10 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1261

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 347  ggcatgccggtgcataaaccatatagaacggctccaatgaatgcatcacctgcaccagt 405
            |||||||||| |||||   |||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 1056 ggcatgccggcgcatatggcatatagaacagctcctatgaatgcatcgccagcaccagt 998
to top
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
          Length = 452528

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 34/35 (97%), Gaps = 1/35 (2%)
 Strand = Plus / Plus

                                                 
Query: 32     ggagataggtatg-aagccactatgagtatatatc 65
              ||||||||||||| |||||||||||||||||||||
Sbjct: 264714 ggagataggtatggaagccactatgagtatatatc 264748



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 34/35 (97%), Gaps = 1/35 (2%)
 Strand = Plus / Plus

                                                 
Query: 32     ggagataggtatg-aagccactatgagtatatatc 65
              ||||||||||||| |||||||||||||||||||||
Sbjct: 172817 ggagataggtatggaagccactatgagtatatatc 172851
to top
>emb|BX826544.1|CNS0A3A8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB37ZH07 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1314

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 366  catatagaacggctccaatgaatgcatcacctgcaccagttgtatctatgagctcttc 423
            |||||||||| ||||| ||||||||||| || |||||||| || ||||  ||||||||
Sbjct: 1101 catatagaacagctcctatgaatgcatcgccagcaccagtggtgtctacaagctcttc 1044
to top
>gb|AE006394.1| Lactococcus lactis subsp. lactis IL1403 section 156 of 218 of the
            complete genome
          Length = 10685

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 384  tgaatgcatcacctgcaccagttgtatcta 413
            |||||| ||| |||||||||||||||||||
Sbjct: 6492 tgaatgtatctcctgcaccagttgtatcta 6521
to top
>gb|DQ352559.1| Thermotoga sp. RQ7, DNA joint XIII-XIII' sequence
          Length = 1964

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 198  aaggaaacagaaactgatcctg 219
            ||||||||||||||||||||||
Sbjct: 1943 aaggaaacagaaactgatcctg 1964
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>gb|DQ352558.1| Thermotoga neapolitana NS-E, DNA joint XIII-XIII' sequence
          Length = 1455

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 198 aaggaaacagaaactgatcctg 219
           ||||||||||||||||||||||
Sbjct: 35  aaggaaacagaaactgatcctg 14
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>gb|U64817.1|LEU64817 Lycopersicon esculentum fructokinase (Frk1) mRNA, complete cds
          Length = 1887

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 386  aatgcatcacctgcaccagttgtatc 411
            ||||||||||| ||||||||||||||
Sbjct: 1130 aatgcatcaccagcaccagttgtatc 1105
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>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 391    atcacctgcaccagttgtatc 411
              |||||||||||||||||||||
Sbjct: 129790 atcacctgcaccagttgtatc 129810
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>gb|AC125155.4| Mus musculus BAC clone RP24-380D9 from chromosome 6, complete sequence
          Length = 173003

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 445   acccaaaagtaacctgccact 465
             |||||||||||||||||||||
Sbjct: 88565 acccaaaagtaacctgccact 88585
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>emb|AL591890.31| Human DNA sequence from clone RP11-54A22 on chromosome 9 Contains three
             novel genes, and the 5' end of the COL5A1 gene for
             collagen (type V) alpha 1, and a CpG island, complete
             sequence
          Length = 173415

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 428   ggtatagcttcagctgtacccaaaa 452
             |||||||||||||||||| ||||||
Sbjct: 20556 ggtatagcttcagctgtatccaaaa 20532
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>gb|AE014196.1| Streptococcus agalactiae 2603V/R section 6 of 100 of the complete
             genome
          Length = 28866

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 391   atcacctgcaccagttgtatc 411
             |||||||||||||||||||||
Sbjct: 23329 atcacctgcaccagttgtatc 23349
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>emb|AL766843.1|SAG766843 Streptococcus agalactiae NEM316 complete genome, segment 1
          Length = 143050

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 391    atcacctgcaccagttgtatc 411
              |||||||||||||||||||||
Sbjct: 128578 atcacctgcaccagttgtatc 128598
to top
>gb|AC093832.2| Homo sapiens BAC clone RP11-402L11 from 4, complete sequence
          Length = 187232

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 448   caaaagtaacctgccactcat 468
             |||||||||||||||||||||
Sbjct: 10519 caaaagtaacctgccactcat 10499
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>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 387   atgcatcacctgcaccagttgtatc 411
             ||||||| |||||||||||||||||
Sbjct: 86287 atgcatctcctgcaccagttgtatc 86263
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>ref|NM_115810.2| Arabidopsis thaliana kinase/ ribokinase AT3G59480 mRNA, complete
           cds
          Length = 1218

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 386 aatgcatcacctgcaccagttgtatcta 413
           |||| |||||| ||||||||||||||||
Sbjct: 885 aatgaatcaccagcaccagttgtatcta 858
to top
>gb|AC175380.2| Mus musculus BAC clone RP24-333L5 from chromosome 13, complete sequence
          Length = 164055

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 410   tctatgagctcttcagagggtata 433
             |||||||||| |||||||||||||
Sbjct: 55083 tctatgagcttttcagagggtata 55060
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>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome
          Length = 149705

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 108    ttgccacaatttcacaataaaagc 131
              ||||||||||||||||||| ||||
Sbjct: 136294 ttgccacaatttcacaatataagc 136317
to top
>gb|AC004926.2| Homo sapiens PAC clone RP5-910H9 from 7, complete sequence
          Length = 153556

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   tttgacttggaagcaatgca 519
             ||||||||||||||||||||
Sbjct: 87451 tttgacttggaagcaatgca 87432
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>emb|AL162576.27| Human DNA sequence from clone RP11-568F20 on chromosome 13 Contains a
             ubiquitin pseudogene, complete sequence
          Length = 105783

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   aaaagcaagacgggatttcc 145
             ||||||||||||||||||||
Sbjct: 94601 aaaagcaagacgggatttcc 94620
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>emb|AL118513.17|HSDJ685L9 Human DNA sequence from clone RP4-685L9 on chromosome 20 Contains the
             gene for a novel protein (FLJ90166), the 5' end of a nove
             genel (LOC149773) and two CpG islands, complete sequence
          Length = 92835

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   acaaggaaacagaaactgat 215
             ||||||||||||||||||||
Sbjct: 84522 acaaggaaacagaaactgat 84503
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>ref|XM_776308.1| PREDICTED: Strongylocentrotus purpuratus similar to ribokinase
           (LOC575948), mRNA
          Length = 810

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 ccaatgaatgcatcacctgc 399
           ||||||||||||||||||||
Sbjct: 659 ccaatgaatgcatcacctgc 640
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>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 384     tgaatgcatcacctgcaccagttgtatc 411
               ||||||||||||| || |||||||||||
Sbjct: 1141096 tgaatgcatcaccagctccagttgtatc 1141123
to top
>emb|X52543.1|SAAGRAB S.aureus agrA, agrB and hld genes
          Length = 6107

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 380  ccaatgaatgcatcacctgcaccagttgtatc 411
            ||||| |||||||| ||||| |||||||||||
Sbjct: 5068 ccaataaatgcatcccctgccccagttgtatc 5099
to top
>emb|AL356014.1|ATF25L23 Arabidopsis thaliana DNA chromosome 3, BAC clone F25L23
          Length = 114080

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 386    aatgcatcacctgcaccagttgtatcta 413
              |||| |||||| ||||||||||||||||
Sbjct: 111404 aatgaatcaccagcaccagttgtatcta 111377
to top
>emb|AL138659.1|ATT16L24 Arabidopsis thaliana DNA chromosome 3, BAC clone T16L24
          Length = 91851

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 386  aatgcatcacctgcaccagttgtatcta 413
            |||| |||||| ||||||||||||||||
Sbjct: 7123 aatgaatcaccagcaccagttgtatcta 7096
to top
>gb|AC069216.13| Homo sapiens 3 BAC RP11-621D6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 150145

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 484    tgcacttattctcaaatttgactt 507
              ||||||| ||||||||||||||||
Sbjct: 116572 tgcacttgttctcaaatttgactt 116595
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>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 380     ccaatgaatgcatcacctgcaccagttgtatc 411
               ||||| |||||||| ||||| |||||||||||
Sbjct: 2086435 ccaataaatgcatcccctgccccagttgtatc 2086466
to top
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   gctctgcagccgcaagcggc 312
             ||||||||||||||||||||
Sbjct: 95461 gctctgcagccgcaagcggc 95480
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>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 380     ccaatgaatgcatcacctgcaccagttgtatc 411
               ||||| |||||||| ||||| |||||||||||
Sbjct: 2097171 ccaataaatgcatcccctgccccagttgtatc 2097202
to top
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 380     ccaatgaatgcatcacctgcaccagttgtatc 411
               ||||| |||||||| ||||| |||||||||||
Sbjct: 2150239 ccaataaatgcatcccctgccccagttgtatc 2150270
to top
>gb|AY086378.1| Arabidopsis thaliana clone 24751 mRNA, complete sequence
          Length = 1217

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 386 aatgcatcacctgcaccagttgtatcta 413
           |||| |||||| ||||||||||||||||
Sbjct: 883 aatgaatcaccagcaccagttgtatcta 856
to top
>dbj|AP002039.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MCB22
          Length = 29694

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   tctcgattgccacaatttca 121
             ||||||||||||||||||||
Sbjct: 23567 tctcgattgccacaatttca 23548
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>gb|AF190793.1|AF190793 Hypocrea jecorina Cys2-His2 zinc finger transcription factor ACEI
           (ace1) gene, complete cds
          Length = 4894

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 2   ttgcggtgacttcatcgtac 21
           ||||||||||||||||||||
Sbjct: 450 ttgcggtgacttcatcgtac 469
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>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D
          Length = 149987

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 108   ttgccacaatttcacaataaaagc 131
             ||||||||||||||||||| ||||
Sbjct: 79057 ttgccacaatttcacaatataagc 79034
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>gb|AC135673.5| Mus musculus BAC clone RP24-279A17 from 16, complete sequence
          Length = 173965

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    tcctggcccccaaagctctg 298
              ||||||||||||||||||||
Sbjct: 109689 tcctggcccccaaagctctg 109708
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>gb|DQ157977.1| Staphylococcus aureus strain HT2001634 putative C-N hydrolase gene,
            partial cds; Hld (hld) gene, complete cds; accessory gene
            regulator gene locus, complete sequence; and putative
            fructokinase gene, partial cds
          Length = 5378

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 380  ccaatgaatgcatcacctgcaccagttgtatc 411
            ||||| |||||||| ||||| |||||||||||
Sbjct: 4915 ccaataaatgcatcccctgccccagttgtatc 4946
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>gb|DQ157958.1| Staphylococcus aureus strain E228 putative C-N hydrolase gene,
            partial cds; Hld (hld) gene, complete cds; accessory gene
            regulator gene locus, complete sequence; and putative
            fructokinase gene, partial cds
          Length = 5375

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 380  ccaatgaatgcatcacctgcaccagttgtatc 411
            ||||| |||||||| ||||| |||||||||||
Sbjct: 4912 ccaataaatgcatcccctgccccagttgtatc 4943


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,322,138
Number of Sequences: 3902068
Number of extensions: 5322138
Number of successful extensions: 115777
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115574
Number of HSP's gapped (non-prelim): 201
length of query: 671
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 648
effective length of database: 17,143,297,704
effective search space: 11108856912192
effective search space used: 11108856912192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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