ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13i23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
2dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
3gb|AC004774.1| Homo sapiens BAC clone CTA-300E22 from 7, complet... 46 0.15
4gb|BT017297.1| Zea mays clone EL01N0315H07.c mRNA sequence 44 0.59
5emb|BX005385.13| Zebrafish DNA sequence from clone DKEY-180N16, ... 44 0.59
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
7gb|AY110058.1| Zea mays CL9888_1 mRNA sequence 44 0.59
8emb|BX005047.5| Zebrafish DNA sequence from clone DKEY-38N1 in l... 44 0.59
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.59
10emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb... 44 0.59
11dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 44 0.59
12ref|XM_979451.1| PREDICTED: Mus musculus RIKEN cDNA 1700023I07 g... 42 2.3
13ref|XM_910715.2| PREDICTED: Mus musculus RIKEN cDNA 1700023I07 g... 42 2.3
14ref|XM_284686.5| PREDICTED: Mus musculus RIKEN cDNA 1700023I07 g... 42 2.3
15emb|CR700140.2|CNS0G36G Tetraodon nigroviridis full-length cDNA 42 2.3
16emb|CR698658.2|CNS0G21A Tetraodon nigroviridis full-length cDNA 42 2.3
17emb|CR696558.2|CNS0G0EY Tetraodon nigroviridis full-length cDNA 42 2.3
18emb|CR694020.2|CNS0FYGG Tetraodon nigroviridis full-length cDNA 42 2.3
19emb|CR692582.3|CNS0FXCI Tetraodon nigroviridis full-length cDNA 42 2.3
20emb|CR692392.2|CNS0FX78 Tetraodon nigroviridis full-length cDNA 42 2.3
21emb|CR686547.2|CNS0FSOV Tetraodon nigroviridis full-length cDNA 42 2.3
22emb|CR684560.1|CNS0FR5O Tetraodon nigroviridis full-length cDNA 42 2.3
23emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4,... 42 2.3
24emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4,... 42 2.3
25dbj|AK133428.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 2.3
26dbj|AK006280.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 2.3
27gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 2.3
28dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
29dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
30gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355... 42 2.3
31gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome... 42 2.3
32dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
33emb|AL928570.14| Mouse DNA sequence from clone RP23-183A10 on ch... 42 2.3
34gb|AY940663.1| Mus musculus non-protein coding RNA-2 mRNA, compl... 42 2.3
35emb|AL683814.10| Mouse DNA sequence from clone RP23-165L23 on ch... 42 2.3
36emb|AL731810.20| Mouse DNA sequence from clone RP23-465B20 on ch... 42 2.3
37ref|NM_192957.1| Oryza sativa (japonica cultivar-group), predic... 40 9.2
38ref|XM_463675.1| Oryza sativa (japonica cultivar-group), predic... 40 9.2
39gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 9.2
40ref|XM_370345.1| Magnaporthe grisea 70-15 chromosome II predicte... 40 9.2
41gb|AC073176.8| Homo sapiens chromosome 10 clone RP11-432J9, comp... 40 9.2
42emb|AL606522.6| Mouse DNA sequence from clone RP23-19L22 on chro... 40 9.2
43gb|AC105273.2| Homo sapiens chromosome 1 clone RP4-716B13, compl... 40 9.2
44gb|AC104650.2| Homo sapiens BAC clone RP11-117J13 from 4, comple... 40 9.2
45gb|AC098828.3| Homo sapiens BAC clone RP11-644K8 from 2, complet... 40 9.2
46gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosom... 40 9.2
47dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
48dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
49emb|BX255969.8| Zebrafish DNA sequence from clone DKEY-67M7 in l... 40 9.2
50dbj|AK073357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
51emb|BX276085.8| Zebrafish DNA sequence from clone CH211-194B5 in... 40 9.2
52dbj|AP003419.3| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 9.2
53gb|AC161882.5| Mus musculus BAC clone RP23-134E24 from chromosom... 40 9.2
54dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                           
Query: 249     cacccctcagacgatcaatcagctcccctttcttcagcttggagtaacctctcatccccc 308
               ||||| ||||||||||||||||||| |  ||||||||| | ||||||||| ||||||  |
Sbjct: 5768198 cacccttcagacgatcaatcagctcactcttcttcagcctcgagtaacctttcatccttc 5768139

                                                    
Query: 309     tctccctcgccatgtccctcagctcaggcaccttcat 345
               || |||||||||  || |||||||||| |||||||||
Sbjct: 5768138 tcgccctcgccaattctctcagctcagccaccttcat 5768102



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 610      ccgtcgtggagcgcgatgga 629
                ||||||||||||||||||||
Sbjct: 40591250 ccgtcgtggagcgcgatgga 40591269



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 118      atctaacaaagaaaacaaca 137
                ||||||||||||||||||||
Sbjct: 25418250 atctaacaaagaaaacaaca 25418231



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 644     tggagagcaaatgatccggggaag 667
               ||||||||||||||||| ||||||
Sbjct: 5767379 tggagagcaaatgatcctgggaag 5767356
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>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0451C06
          Length = 151773

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                         
Query: 249   cacccctcagacgatcaatcagctcccctttcttcagcttggagtaacctctcatccccc 308
             ||||| ||||||||||||||||||| |  ||||||||| | ||||||||| ||||||  |
Sbjct: 92900 cacccttcagacgatcaatcagctcactcttcttcagcctcgagtaacctttcatccttc 92841

                                                  
Query: 309   tctccctcgccatgtccctcagctcaggcaccttcat 345
             || |||||||||  || |||||||||| |||||||||
Sbjct: 92840 tcgccctcgccaattctctcagctcagccaccttcat 92804



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 644   tggagagcaaatgatccggggaag 667
             ||||||||||||||||| ||||||
Sbjct: 92081 tggagagcaaatgatcctgggaag 92058
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>gb|AC004774.1| Homo sapiens BAC clone CTA-300E22 from 7, complete sequence
          Length = 161652

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 126   aagaaaacaacagacgcaagaaaagtc 152
             |||||||||||||| ||||||||||||
Sbjct: 87727 aagaaaacaacagaagcaagaaaagtc 87753
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>gb|BT017297.1| Zea mays clone EL01N0315H07.c mRNA sequence
          Length = 879

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 610 ccgtcgtggagcgcgatggaga 631
           ||||||||||||||||||||||
Sbjct: 173 ccgtcgtggagcgcgatggaga 152
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>emb|BX005385.13| Zebrafish DNA sequence from clone DKEY-180N16, complete sequence
          Length = 159174

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 253    cctcagacgatcaatcagctcc 274
              ||||||||||||||||||||||
Sbjct: 129413 cctcagacgatcaatcagctcc 129434
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 9        tatttaggtagggagggagtac 30
                ||||||||||||||||||||||
Sbjct: 26282098 tatttaggtagggagggagtac 26282119
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>gb|AY110058.1| Zea mays CL9888_1 mRNA sequence
          Length = 1002

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 610 ccgtcgtggagcgcgatggaga 631
           ||||||||||||||||||||||
Sbjct: 781 ccgtcgtggagcgcgatggaga 802
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>emb|BX005047.5| Zebrafish DNA sequence from clone DKEY-38N1 in linkage group 1,
             complete sequence
          Length = 141396

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 253   cctcagacgatcaatcagctcc 274
             ||||||||||||||||||||||
Sbjct: 45989 cctcagacgatcaatcagctcc 46010
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 9        tatttaggtagggagggagtac 30
                ||||||||||||||||||||||
Sbjct: 26210274 tatttaggtagggagggagtac 26210295
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>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 133978

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 9     tatttaggtagggagggagtac 30
             ||||||||||||||||||||||
Sbjct: 46082 tatttaggtagggagggagtac 46103
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 475    ggcaatggcggcctggatggcc 496
              ||||||||||||||||||||||
Sbjct: 220943 ggcaatggcggcctggatggcc 220922
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>ref|XM_979451.1| PREDICTED: Mus musculus RIKEN cDNA 1700023I07 gene (1700023I07Rik),
           mRNA
          Length = 767

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 476 gcaatggcggcctggatggcc 496
           |||||||||||||||||||||
Sbjct: 95  gcaatggcggcctggatggcc 115
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>ref|XM_910715.2| PREDICTED: Mus musculus RIKEN cDNA 1700023I07 gene (1700023I07Rik),
           mRNA
          Length = 767

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 476 gcaatggcggcctggatggcc 496
           |||||||||||||||||||||
Sbjct: 95  gcaatggcggcctggatggcc 115
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>ref|XM_284686.5| PREDICTED: Mus musculus RIKEN cDNA 1700023I07 gene (1700023I07Rik),
           mRNA
          Length = 767

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 476 gcaatggcggcctggatggcc 496
           |||||||||||||||||||||
Sbjct: 95  gcaatggcggcctggatggcc 115
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>emb|CR700140.2|CNS0G36G Tetraodon nigroviridis full-length cDNA
          Length = 1074

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 268 cagctcccctttcttcagctt 288
           |||||||||||||||||||||
Sbjct: 715 cagctcccctttcttcagctt 695
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>emb|CR698658.2|CNS0G21A Tetraodon nigroviridis full-length cDNA
          Length = 837

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 268 cagctcccctttcttcagctt 288
           |||||||||||||||||||||
Sbjct: 505 cagctcccctttcttcagctt 485
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>emb|CR696558.2|CNS0G0EY Tetraodon nigroviridis full-length cDNA
          Length = 1088

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 268 cagctcccctttcttcagctt 288
           |||||||||||||||||||||
Sbjct: 759 cagctcccctttcttcagctt 739
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>emb|CR694020.2|CNS0FYGG Tetraodon nigroviridis full-length cDNA
          Length = 1064

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 268 cagctcccctttcttcagctt 288
           |||||||||||||||||||||
Sbjct: 732 cagctcccctttcttcagctt 712
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>emb|CR692582.3|CNS0FXCI Tetraodon nigroviridis full-length cDNA
          Length = 837

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 268 cagctcccctttcttcagctt 288
           |||||||||||||||||||||
Sbjct: 505 cagctcccctttcttcagctt 485
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>emb|CR692392.2|CNS0FX78 Tetraodon nigroviridis full-length cDNA
          Length = 1084

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 268 cagctcccctttcttcagctt 288
           |||||||||||||||||||||
Sbjct: 757 cagctcccctttcttcagctt 737
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>emb|CR686547.2|CNS0FSOV Tetraodon nigroviridis full-length cDNA
          Length = 1069

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 268 cagctcccctttcttcagctt 288
           |||||||||||||||||||||
Sbjct: 737 cagctcccctttcttcagctt 717
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>emb|CR684560.1|CNS0FR5O Tetraodon nigroviridis full-length cDNA
          Length = 1050

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 268 cagctcccctttcttcagctt 288
           |||||||||||||||||||||
Sbjct: 728 cagctcccctttcttcagctt 708
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>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01,
              complete sequence
          Length = 186325

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 1      actacaattatttaggtagggagggagtacaaa 33
              |||||| |||||| || ||||||||||||||||
Sbjct: 174505 actacatttattttgggagggagggagtacaaa 174473
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>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16,
            complete sequence
          Length = 145739

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 1    actacaattatttaggtagggagggagtacaaa 33
            |||||| |||||| || ||||||||||||||||
Sbjct: 4178 actacatttattttgggagggagggagtacaaa 4146
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>dbj|AK133428.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4933427K18 product:hypothetical Protein
           phosphatase inhibitor 2 (IPP-2) containing protein, full
           insert sequence
          Length = 766

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 476 gcaatggcggcctggatggcc 496
           |||||||||||||||||||||
Sbjct: 96  gcaatggcggcctggatggcc 116
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>dbj|AK006280.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700023I07 product:weakly similar to
           PROTEIN PHOSPHATASE INHIBITOR 2 (IPP-2) [Rattus
           norvegicus], full insert sequence
          Length = 730

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 476 gcaatggcggcctggatggcc 496
           |||||||||||||||||||||
Sbjct: 98  gcaatggcggcctggatggcc 118
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 571     tgctctgaccgtcaatgaaga 591
               |||||||||||||||||||||
Sbjct: 2487729 tgctctgaccgtcaatgaaga 2487749
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 1        actacaattatttaggtagggagggagtacaaa 33
                |||||| |||||| || ||||||||||||||||
Sbjct: 29501489 actacatttattttgggagggagggagtacaaa 29501457
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 5        caattatttaggtagggagggagta 29
                |||||||||||||| ||||||||||
Sbjct: 28105261 caattatttaggtatggagggagta 28105285
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>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete
             sequence
          Length = 173386

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 296   cctctcatccccctctccctc 316
             |||||||||||||||||||||
Sbjct: 85705 cctctcatccccctctccctc 85685
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>gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome 7, complete sequence
          Length = 215193

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 109    agatactgtatctaacaaagaaaac 133
              |||||||||||| ||||||||||||
Sbjct: 101520 agatactgtatcaaacaaagaaaac 101544
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>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0450A04
          Length = 162545

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 5     caattatttaggtagggagggagta 29
             |||||||||||||| ||||||||||
Sbjct: 88557 caattatttaggtatggagggagta 88581
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>emb|AL928570.14| Mouse DNA sequence from clone RP23-183A10 on chromosome X, complete
            sequence
          Length = 91550

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 476  gcaatggcggcctggatggcc 496
            |||||||||||||||||||||
Sbjct: 9710 gcaatggcggcctggatggcc 9730
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>gb|AY940663.1| Mus musculus non-protein coding RNA-2 mRNA, complete sequence
          Length = 840

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 tcagctcccctttcttcagct 287
           |||||||||||||||||||||
Sbjct: 312 tcagctcccctttcttcagct 292
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>emb|AL683814.10| Mouse DNA sequence from clone RP23-165L23 on chromosome 2, complete
              sequence
          Length = 191052

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 267    tcagctcccctttcttcagct 287
              |||||||||||||||||||||
Sbjct: 120361 tcagctcccctttcttcagct 120341
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>emb|AL731810.20| Mouse DNA sequence from clone RP23-465B20 on chromosome 4, complete
             sequence
          Length = 173609

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 333   caggcaccttcatgtcctcca 353
             |||||||||||||||||||||
Sbjct: 94228 caggcaccttcatgtcctcca 94208
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>ref|NM_192957.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4575

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  atctaacaaagaaaacaaca 137
            ||||||||||||||||||||
Sbjct: 2220 atctaacaaagaaaacaaca 2239
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>ref|XM_463675.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 588

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 610 ccgtcgtggagcgcgatgga 629
           ||||||||||||||||||||
Sbjct: 89  ccgtcgtggagcgcgatgga 70
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>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
              sequence
          Length = 1507550

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 504    attctatgagctcttctttg 523
              ||||||||||||||||||||
Sbjct: 391603 attctatgagctcttctttg 391584
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>ref|XM_370345.1| Magnaporthe grisea 70-15 chromosome II predicted protein (MG06842.4)
            partial mRNA
          Length = 3054

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 424  agccggcgacgacggcttcc 443
            ||||||||||||||||||||
Sbjct: 2766 agccggcgacgacggcttcc 2785
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>gb|AC073176.8| Homo sapiens chromosome 10 clone RP11-432J9, complete sequence
          Length = 175610

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    tcgccatgtccctcagctca 334
              ||||||||||||||||||||
Sbjct: 126963 tcgccatgtccctcagctca 126944
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>emb|AL606522.6| Mouse DNA sequence from clone RP23-19L22 on chromosome 11 Contains the
             Actr2 gene for ARP2 actin-related protein 2 homolog
             (yeast), a small nuclear ribonucleoprotein polypeptide G
             (Snrpg) pseudogene, two novel genes, the Rab1 gene for
             RAB1, member RAS oncogene family and three CpG islands,
             complete sequence
          Length = 203071

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 106   ggaagatactgtatctaacaaagaaaac 133
             ||||||||||||||| ||||||||||||
Sbjct: 54909 ggaagatactgtatc-aacaaagaaaac 54935
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>gb|AC105273.2| Homo sapiens chromosome 1 clone RP4-716B13, complete sequence
          Length = 138485

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 126    aagaaaacaacagacgcaagaaaa 149
              ||||||||||||||| ||||||||
Sbjct: 130871 aagaaaacaacagacacaagaaaa 130848
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>gb|AC104650.2| Homo sapiens BAC clone RP11-117J13 from 4, complete sequence
          Length = 163948

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    tgtatctaacaaagaaaaca 134
              ||||||||||||||||||||
Sbjct: 139105 tgtatctaacaaagaaaaca 139124
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>gb|AC098828.3| Homo sapiens BAC clone RP11-644K8 from 2, complete sequence
          Length = 127408

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   ctcttctttgctgtgcttct 533
             ||||||||||||||||||||
Sbjct: 85171 ctcttctttgctgtgcttct 85152
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>gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosome 17, complete
             sequence
          Length = 198374

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 42    gcaaaggatagatgcaagaaaaca 65
             ||||||||||||| ||||||||||
Sbjct: 88362 gcaaaggatagatccaagaaaaca 88339
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>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0093F16
          Length = 160925

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 610   ccgtcgtggagcgcgatgga 629
             ||||||||||||||||||||
Sbjct: 33228 ccgtcgtggagcgcgatgga 33247
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>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0663E10
          Length = 162297

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    atctaacaaagaaaacaaca 137
              ||||||||||||||||||||
Sbjct: 108250 atctaacaaagaaaacaaca 108231
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>emb|BX255969.8| Zebrafish DNA sequence from clone DKEY-67M7 in linkage group 11,
            complete sequence
          Length = 155717

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 281  ttcagcttggagtaacctct 300
            ||||||||||||||||||||
Sbjct: 3792 ttcagcttggagtaacctct 3811
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>dbj|AK073357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027F19, full
           insert sequence
          Length = 862

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 610 ccgtcgtggagcgcgatgga 629
           ||||||||||||||||||||
Sbjct: 180 ccgtcgtggagcgcgatgga 161
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>emb|BX276085.8| Zebrafish DNA sequence from clone CH211-194B5 in linkage group 19,
              complete sequence
          Length = 202683

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 505    ttctatgagctcttctttgctgtg 528
              |||||||||||||||| |||||||
Sbjct: 134959 ttctatgagctcttctgtgctgtg 134982
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>dbj|AP003419.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-1337H24, complete
             sequence
          Length = 168565

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   ctctcatccccctctccctc 316
             ||||||||||||||||||||
Sbjct: 38678 ctctcatccccctctccctc 38697
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>gb|AC161882.5| Mus musculus BAC clone RP23-134E24 from chromosome 16, complete sequence
          Length = 206219

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 108    aagatactgtatctaacaaagaaa 131
              |||||||||||||||||| |||||
Sbjct: 125463 aagatactgtatctaacagagaaa 125440
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>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482D04
          Length = 144583

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 610   ccgtcgtggagcgcgatgga 629
             ||||||||||||||||||||
Sbjct: 71265 ccgtcgtggagcgcgatgga 71284


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,930,340
Number of Sequences: 3902068
Number of extensions: 5930340
Number of successful extensions: 121209
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 120731
Number of HSP's gapped (non-prelim): 479
length of query: 670
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 647
effective length of database: 17,143,297,704
effective search space: 11091713614488
effective search space used: 11091713614488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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