ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13i20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GT3_ARATH (Q9LF80) Putative glycosyltransferase 3 (EC 2.4.-.-) (... 199 6e-51
2GT4_ARATH (Q9M9U0) Putative glycosyltransferase 4 (EC 2.4.-.-) (... 197 2e-50
3GT5_ARATH (Q9CA75) Putative glycosyltransferase 5 (EC 2.4.-.-) (... 195 1e-49
4GT2_ARATH (O22775) Putative glycosyltransferase 2 (EC 2.4.-.-) (... 179 5e-45
5XT1_ARATH (Q9LZJ3) Xyloglucan 6-xylosyltransferase (EC 2.4.2.39)... 171 1e-42
6GT6_ARATH (Q9SZG1) Putative glycosyltransferase 6 (EC 2.4.-.-) (... 74 5e-13
7GT7_ARATH (O81007) Putative glycosyltransferase 7 (EC 2.4.-.-) (... 73 7e-13
8SAV_DROME (Q9VCR6) Scaffold protein salvador (Shar-pei) 32 2.2
9AMHR2_HUMAN (Q16671) Anti-Muellerian hormone type-2 receptor pre... 31 2.9
10YHR8_SCHPO (Q8WZK2) Protein C839.08c in chromosome II precursor 31 3.8
11EMB_HUMAN (Q6PCB8) Embigin precursor 30 4.9
12POLG_CXB1J (P08291) Genome polyprotein [Contains: Coat protein V... 30 8.4

>GT3_ARATH (Q9LF80) Putative glycosyltransferase 3 (EC 2.4.-.-) (AtGT3)|
          Length = 457

 Score =  199 bits (506), Expect = 6e-51
 Identities = 86/115 (74%), Positives = 99/115 (86%)
 Frame = -3

Query: 662 KVYIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGDYPVDRC 483
           KV++EN YYLHGFW GLVDKYEEMME +HPGLGDERWPF+THFVGCKPCGSY DY V+RC
Sbjct: 336 KVFVENQYYLHGFWEGLVDKYEEMMEKYHPGLGDERWPFITHFVGCKPCGSYADYAVERC 395

Query: 482 LKSMERAFNFADNQVLRLYGFAHKGLESPKIKRIRSQTTKPINDKENLDVKAKMP 318
           LKSMERAFNFADNQVL+LYGF H+GL SPKIKRIR++TT P+   +  D++   P
Sbjct: 396 LKSMERAFNFADNQVLKLYGFGHRGLLSPKIKRIRNETTFPLKFVDRFDIRRTTP 450



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>GT4_ARATH (Q9M9U0) Putative glycosyltransferase 4 (EC 2.4.-.-) (AtGT4)|
          Length = 513

 Score =  197 bits (502), Expect = 2e-50
 Identities = 84/111 (75%), Positives = 97/111 (87%)
 Frame = -3

Query: 662 KVYIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGDYPVDRC 483
           KVY+EN YYLHGFW GLVD+YEEM+E +HPGLGDERWPFVTHFVGCKPCGSY DY VDRC
Sbjct: 395 KVYVENQYYLHGFWEGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYADYAVDRC 454

Query: 482 LKSMERAFNFADNQVLRLYGFAHKGLESPKIKRIRSQTTKPINDKENLDVK 330
            KSMERAFNFADNQVL+LYGF+H+GL SPKIKRIR++T  P+   +  D++
Sbjct: 455 FKSMERAFNFADNQVLKLYGFSHRGLLSPKIKRIRNETVSPLESVDKFDIR 505



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>GT5_ARATH (Q9CA75) Putative glycosyltransferase 5 (EC 2.4.-.-) (AtGT5)|
          Length = 457

 Score =  195 bits (495), Expect = 1e-49
 Identities = 83/111 (74%), Positives = 98/111 (88%)
 Frame = -3

Query: 662 KVYIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGDYPVDRC 483
           KV++EN YYLHGFW GLVD+YEEM+E +HPGLGDERWPFVTHFVGCKPCGSY DY V+RC
Sbjct: 337 KVFVENQYYLHGFWEGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYADYAVERC 396

Query: 482 LKSMERAFNFADNQVLRLYGFAHKGLESPKIKRIRSQTTKPINDKENLDVK 330
           LKSMERAFNFADNQVL+LYGF+H+GL SPKIKRIR++T  P+   +  D++
Sbjct: 397 LKSMERAFNFADNQVLKLYGFSHRGLLSPKIKRIRNETVSPLEFVDKFDIR 447



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>GT2_ARATH (O22775) Putative glycosyltransferase 2 (EC 2.4.-.-) (AtGT2)|
          Length = 461

 Score =  179 bits (455), Expect = 5e-45
 Identities = 73/108 (67%), Positives = 92/108 (85%)
 Frame = -3

Query: 662 KVYIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGDYPVDRC 483
           KVY+E+ YYLHG+W  LVD+YEEM+EN+HPGLGD RWP VTHFVGCKPCG +GDYPV+RC
Sbjct: 337 KVYLESGYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERC 396

Query: 482 LKSMERAFNFADNQVLRLYGFAHKGLESPKIKRIRSQTTKPINDKENL 339
           LK M+RAFNF DNQ+L++YGF HK L S K+KR+R++T+ P+  K+ L
Sbjct: 397 LKQMDRAFNFGDNQILQIYGFTHKSLASRKVKRVRNETSNPLEMKDEL 444



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>XT1_ARATH (Q9LZJ3) Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)|
          Length = 460

 Score =  171 bits (434), Expect = 1e-42
 Identities = 73/124 (58%), Positives = 95/124 (76%), Gaps = 6/124 (4%)
 Frame = -3

Query: 662 KVYIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGDYPVDRC 483
           KVY+E+ YYLHG+W  LVD+YEEM+ENH PG GD RWP VTHFVGCKPCG +GDYPV+RC
Sbjct: 336 KVYLESGYYLHGYWGILVDRYEEMIENHKPGFGDHRWPLVTHFVGCKPCGKFGDYPVERC 395

Query: 482 LKSMERAFNFADNQVLRLYGFAHKGLESPKIKRIRSQTTKPINDKENLDV------KAKM 321
           L+ M+RAFNF DNQ+L++YGF HK L S ++K  R+QT +P++ K+   +       AK+
Sbjct: 396 LRQMDRAFNFGDNQILQMYGFTHKSLGSRRVKPTRNQTDRPLDAKDEFGLLHPPFKAAKL 455

Query: 320 PTTS 309
            TT+
Sbjct: 456 STTT 459



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>GT6_ARATH (Q9SZG1) Putative glycosyltransferase 6 (EC 2.4.-.-) (AtGT6)|
          Length = 432

 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 43/124 (34%), Positives = 56/124 (45%), Gaps = 38/124 (30%)
 Frame = -3

Query: 662 KVYIENSYYLHGFWAGL-------VDKYEEM---------------------------ME 585
           K+Y+E  YYL G+W G+        ++Y EM                           ++
Sbjct: 293 KIYLEAEYYLQGYWIGVFGDFANVTERYLEMEREDDTLRRRHAEKVSERYGAFREERFLK 352

Query: 584 NHHPGLGDERWPFVTHFVGCKPCGSYGD----YPVDRCLKSMERAFNFADNQVLRLYGFA 417
               G G  R  F+THF GC+PC   GD    Y  D C   M RA NFADNQV+R+YG+ 
Sbjct: 353 GEFGGRGSRRRAFITHFTGCQPCS--GDHNPSYDGDTCWNEMIRALNFADNQVMRVYGYV 410

Query: 416 HKGL 405
           H  L
Sbjct: 411 HSDL 414



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>GT7_ARATH (O81007) Putative glycosyltransferase 7 (EC 2.4.-.-) (AtGT7)|
          Length = 449

 Score = 73.2 bits (178), Expect = 7e-13
 Identities = 43/124 (34%), Positives = 56/124 (45%), Gaps = 38/124 (30%)
 Frame = -3

Query: 662 KVYIENSYYLHGFWAGLV-------DKYEEM---------------------------ME 585
           K+Y+E  +Y  G+W  +V       ++Y EM                           ++
Sbjct: 310 KIYLEGDFYFEGYWLEIVPGLSNVTERYLEMEREDATLRRRHAEKVSERYAAFREERFLK 369

Query: 584 NHHPGLGDERWPFVTHFVGCKPCGSYGD----YPVDRCLKSMERAFNFADNQVLRLYGFA 417
               G G +R PFVTHF GC+PC   GD    Y  D C   M +A NFADNQV+R YGF 
Sbjct: 370 GERGGKGSKRRPFVTHFTGCQPCS--GDHNKMYDGDTCWNGMIKAINFADNQVMRKYGFV 427

Query: 416 HKGL 405
           H  L
Sbjct: 428 HSDL 431



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>SAV_DROME (Q9VCR6) Scaffold protein salvador (Shar-pei)|
          Length = 608

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = +2

Query: 473 YS*DTGQLDNHHSFRMACTRQSVSQMATAHPQALDGGSPSSPRTCPPIQPRNHASSMNSL 652
           YS    Q D +H+ R A ++  + Q + +HP +L   S    R+ PP+ P    +S N L
Sbjct: 83  YSCTDSQPDYYHA-RRAQSQMPLQQHSHSHPHSLPHPSHPHVRSHPPLPPHQFRASSNQL 141



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>AMHR2_HUMAN (Q16671) Anti-Muellerian hormone type-2 receptor precursor (EC|
           2.7.11.30) (Anti-Muellerian hormone type II receptor)
           (AMH type II receptor) (MIS type II receptor) (MISRII)
           (MRII)
          Length = 573

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +2

Query: 524 CTRQSVSQMATAHPQALDGGSPSSPRTCPPIQPRNHASSMNSLYTPC 664
           C +Q ++  A AHPQ       S PR CPP+ P +  S       PC
Sbjct: 500 CVQQRLA--ALAHPQESHPFPESCPRGCPPLCPEDCTSIPAPTILPC 544



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>YHR8_SCHPO (Q8WZK2) Protein C839.08c in chromosome II precursor|
          Length = 935

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = -3

Query: 656 YIENSYYLHGFWAGLVDKYEEMMENHHPGLGDERWPFVTHFVGCKPCGSYGDYPVD 489
           Y+EN  Y+ G    LVDK    M N++   G   W F     G    GS+GD  +D
Sbjct: 233 YVENIQYIDGKIQELVDK----MNNYYNNDGASSWVFTADH-GMSDFGSHGDGNLD 283



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>EMB_HUMAN (Q6PCB8) Embigin precursor|
          Length = 327

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 548 MATAHPQALDGGSPSSPRTCPPIQPRNHASSMN 646
           +A A P + DG +P SP T PP++    A++ +
Sbjct: 24  LAAARPSSADGSAPDSPFTSPPLREEIMANNFS 56



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>POLG_CXB1J (P08291) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
           protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
           VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
           P2A); Core protein P2B; Core protein P2C; Core protein
           P3A; Genome
          Length = 2181

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = -1

Query: 223 FFCLFACGFFSCYV*QLEIAHGMFIVNSNVVGAQIRRK----YLSFVLNFISVLLS 68
           F C  AC +++ Y    E  +  +++N+  V   +RRK    YL F L    V+ S
Sbjct: 636 FLCRSACVYYATYNNNSEKGYAEWVINTRQVAQLLRRKLEFTYLRFDLELTFVITS 691


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,869,520
Number of Sequences: 219361
Number of extensions: 1978729
Number of successful extensions: 5463
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5456
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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