ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13i14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186373.2| Oryza sativa (japonica cultivar-group), mRNA 119 1e-23
2ref|XM_506415.1| PREDICTED Oryza sativa (japonica cultivar-group... 119 1e-23
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
4dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
5dbj|AK067895.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 1e-23
6dbj|AK067784.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 1e-23
7emb|AJ575241.1|OSA575241 Oryza sativa (japonica cultivar-group) ... 70 1e-08
8gb|BT019091.1| Zea mays clone Contig689.F mRNA sequence 54 6e-04
9gb|AY110023.1| Zea mays CL41684_1 mRNA sequence 54 6e-04
10gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete se... 44 0.61
11gb|AC093868.2| Homo sapiens BAC clone RP11-590C19 from 4, comple... 44 0.61
12gb|AC104170.2| Homo sapiens chromosome 1 clone RP11-253A20, comp... 44 0.61
13gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, c... 42 2.4
14ref|XM_629451.1| Dictyostelium discoideum hypothetical protein (... 42 2.4
15gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173... 42 2.4
16gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC... 42 2.4
17gb|AC123074.2| Mus musculus BAC clone RP23-168H19 from 10, compl... 42 2.4
18gb|AF186189.3| Homo sapiens chromosome 8 clone GS1-403B2 map 8q2... 42 2.4
19gb|AC080009.13| Homo sapiens 3q BAC RP11-460M17 (Roswell Park Ca... 42 2.4
20gb|AC160650.2| Pan troglodytes BAC clone CH251-548K10 from chrom... 42 2.4
21gb|AC163744.3| Pan troglodytes BAC clone CH251-376E11 from chrom... 42 2.4
22gb|AC175061.3| Pan troglodytes BAC clone CH251-572M8 from chromo... 42 2.4
23gb|AC109327.10| Homo sapiens chromosome 17, clone RP11-93C20, co... 42 2.4
24gb|AC133638.7| Homo sapiens chromosome 17, clone CTD-2125J20, co... 42 2.4
25emb|BX571686.2| Carp DNA sequence from clone carpf-C114, complet... 42 2.4
26dbj|AP002469.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.4
27dbj|AP002762.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.4
28gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome 42 2.4
29gb|AC159013.2| Gallus gallus BAC clone CH261-33A3 from chromosom... 42 2.4
30gb|AC160643.2| Gallus gallus BAC clone CH261-123L21 from chromos... 42 2.4
31gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, compl... 42 2.4
32emb|AL591490.12| Mouse DNA sequence from clone RP23-144O20 on ch... 42 2.4
33dbj|AP004295.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 2.4
34ref|NM_025218.2| Homo sapiens UL16 binding protein 1 (ULBP1), mRNA 40 9.5
35gb|AC161754.4| Mus musculus BAC clone RP24-446K8 from chromosome... 40 9.5
36gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
37gb|AC115719.10| Mus musculus chromosome 18, clone RP24-356J16, c... 40 9.5
38gb|L17343.1|HVPTGMRGZ Helicoverpa punctigera tRNA-Met gene, part... 40 9.5
39gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 9.5
40gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome 40 9.5
41gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome 40 9.5
42gb|AC102228.8| Mus musculus chromosome 13, clone RP24-64M1, comp... 40 9.5
43emb|CR392027.16| Zebrafish DNA sequence from clone CH211-139G16 ... 40 9.5
44gb|AC104964.12| Homo sapiens chromosome 8, clone RP11-981G7, com... 40 9.5
45gb|AC106818.2| Homo sapiens chromosome 5 clone RP11-65F13, compl... 40 9.5
46gb|AE017245.1| Mycoplasma synoviae 53, complete genome 40 9.5
47emb|AL590682.9| Human DNA sequence from clone RP11-435F13 on chr... 40 9.5
48emb|AL355497.14| Human DNA sequence from clone RP11-472G23 on ch... 40 9.5
49emb|AL139083.15| Human DNA sequence from clone RP11-270C18 on ch... 40 9.5
50emb|AL138832.10| Human DNA sequence from clone RP3-445H2 on chro... 40 9.5
51emb|CR847536.5| Zebrafish DNA sequence from clone DKEY-188N1 in ... 40 9.5
52gb|BC035416.1| Homo sapiens UL16 binding protein 1, mRNA (cDNA c... 40 9.5
53gb|AC162181.2| Mus musculus BAC clone RP23-49J15 from chromosome... 40 9.5
54gb|AC090024.11| Homo sapiens 3q BAC RP11-259J3 (Roswell Park Can... 40 9.5
55gb|AC118990.2| Homo sapiens chromosome 1 clone RP11-243K11, comp... 40 9.5
56gb|AC013650.8| Homo sapiens chromosome 8, clone RP11-24L2, compl... 40 9.5
57gb|AC096763.2| Homo sapiens BAC clone RP11-625A6 from 4, complet... 40 9.5
58gb|AC108102.2| Homo sapiens chromosome 5 clone RP11-185E12, comp... 40 9.5
59emb|BX322601.9| Zebrafish DNA sequence from clone DKEY-170H8 in ... 40 9.5
60gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 9.5
61gb|AF268057.1| Candidatus Carsonella ruddii natural-host Acizzia... 40 9.5
62gb|AC013751.6|AC013751 Homo sapiens chromosome , clone RP11-298P... 40 9.5
63dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
64gb|AC017101.10| Homo sapiens BAC clone RP11-556A11 from 2, compl... 40 9.5
65gb|AC007222.5| Homo sapiens chromosome 16 clone RP11-441K8, comp... 40 9.5
66emb|AL935161.18| Mouse DNA sequence from clone RP23-433M8 on chr... 40 9.5
67gb|AC123942.4| Mus musculus BAC clone RP23-470C23 from 1, comple... 40 9.5
68emb|CT737180.5| M.truncatula DNA sequence from clone MTH2-117L19... 40 9.5
69gb|AF098461.1|AF098461 Lactobacillus salivarius subsp. salivariu... 40 9.5
70gb|AY170450.2| Tolypella nidifica tRNA-Lys (trnK) gene, partial ... 40 9.5
71emb|CR974440.6| Zebrafish DNA sequence from clone CH73-78M16 in ... 40 9.5
72gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome 40 9.5
73gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
74emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb... 40 9.5
75gb|AC127590.3| Mus musculus BAC clone RP23-147I5 from 13, comple... 40 9.5
76gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complet... 40 9.5 
>ref|NM_186373.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2599

 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/96 (93%), Gaps = 3/96 (3%)
 Strand = Plus / Minus

                                                                        
Query: 179  accaccatctctgactttgcc-accaaaaatt-caagaataaaaatgaataa-ttattat 235
            ||||||||||||||||||||| |||||||||| ||||||| |||| |||||| |||||||
Sbjct: 2360 accaccatctctgactttgcccaccaaaaatttcaagaattaaaaagaataaattattat 2301

                                                
Query: 236  ttactaggaccagcaactattctttggtaaataacc 271
            |||||||||||| |||||||||||||||||||||||
Sbjct: 2300 ttactaggaccaacaactattctttggtaaataacc 2265



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                        
Query: 502  caaaccctggttggtcagggcatctcaatcgatccagctcctcaccatcaacaccccagt 561
            |||||||||||||  |||||| |||||| ||  | |||||||| | ||| ||||||||||
Sbjct: 2014 caaaccctggttgtgcagggcgtctcaagcggactagctcctcgctatcgacaccccagt 1955

                               
Query: 562  caaccttacccattgggga 580
            ||||||||||||| |||||
Sbjct: 1954 caaccttacccatcgggga 1936



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 58   ctgaactaaccaaaagaatactagttaggac 88
            |||| |||| |||||||||||||||||||||
Sbjct: 2470 ctgagctaatcaaaagaatactagttaggac 2440



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 73/90 (81%)
 Strand = Plus / Minus

                                                                        
Query: 314  tcacttctgatccgtctgcagctgctccagccaagcaccaatggccatctgatccaatat 373
            |||||||||||||   |||| |||||| ||||||||||| ||  || |||| ||||| | 
Sbjct: 2211 tcacttctgatccaggtgcatctgctcaagccaagcaccgatcaccgtctggtccaacaa 2152

                                          
Query: 374  atcagcctggttgttccagtcaggcctgtt 403
             ||| |||| ||||||  ||||||||||||
Sbjct: 2151 gtcaccctgattgttcaggtcaggcctgtt 2122
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>ref|XM_506415.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1092_A07.129 mRNA
          Length = 2674

 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/96 (93%), Gaps = 3/96 (3%)
 Strand = Plus / Minus

                                                                        
Query: 179  accaccatctctgactttgcc-accaaaaatt-caagaataaaaatgaataa-ttattat 235
            ||||||||||||||||||||| |||||||||| ||||||| |||| |||||| |||||||
Sbjct: 2372 accaccatctctgactttgcccaccaaaaatttcaagaattaaaaagaataaattattat 2313

                                                
Query: 236  ttactaggaccagcaactattctttggtaaataacc 271
            |||||||||||| |||||||||||||||||||||||
Sbjct: 2312 ttactaggaccaacaactattctttggtaaataacc 2277



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                        
Query: 502  caaaccctggttggtcagggcatctcaatcgatccagctcctcaccatcaacaccccagt 561
            |||||||||||||  |||||| |||||| ||  | |||||||| | ||| ||||||||||
Sbjct: 2026 caaaccctggttgtgcagggcgtctcaagcggactagctcctcgctatcgacaccccagt 1967

                               
Query: 562  caaccttacccattgggga 580
            ||||||||||||| |||||
Sbjct: 1966 caaccttacccatcgggga 1948



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 58   ctgaactaaccaaaagaatactagttaggac 88
            |||| |||| |||||||||||||||||||||
Sbjct: 2482 ctgagctaatcaaaagaatactagttaggac 2452



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 73/90 (81%)
 Strand = Plus / Minus

                                                                        
Query: 314  tcacttctgatccgtctgcagctgctccagccaagcaccaatggccatctgatccaatat 373
            |||||||||||||   |||| |||||| ||||||||||| ||  || |||| ||||| | 
Sbjct: 2223 tcacttctgatccaggtgcatctgctcaagccaagcaccgatcaccgtctggtccaacaa 2164

                                          
Query: 374  atcagcctggttgttccagtcaggcctgtt 403
             ||| |||| ||||||  ||||||||||||
Sbjct: 2163 gtcaccctgattgttcaggtcaggcctgtt 2134
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/96 (93%), Gaps = 3/96 (3%)
 Strand = Plus / Minus

                                                                            
Query: 179      accaccatctctgactttgcc-accaaaaatt-caagaataaaaatgaataa-ttattat 235
                ||||||||||||||||||||| |||||||||| ||||||| |||| |||||| |||||||
Sbjct: 22790055 accaccatctctgactttgcccaccaaaaatttcaagaattaaaaagaataaattattat 22789996

                                                    
Query: 236      ttactaggaccagcaactattctttggtaaataacc 271
                |||||||||||| |||||||||||||||||||||||
Sbjct: 22789995 ttactaggaccaacaactattctttggtaaataacc 22789960



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                            
Query: 502      caaaccctggttggtcagggcatctcaatcgatccagctcctcaccatcaacaccccagt 561
                |||||||||||||  |||||| |||||| ||  | |||||||| | ||| ||||||||||
Sbjct: 22789709 caaaccctggttgtgcagggcgtctcaagcggactagctcctcgctatcgacaccccagt 22789650

                                   
Query: 562      caaccttacccattgggga 580
                ||||||||||||| |||||
Sbjct: 22789649 caaccttacccatcgggga 22789631



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 58       ctgaactaaccaaaagaatactagttaggac 88
                |||| |||| |||||||||||||||||||||
Sbjct: 22790165 ctgagctaatcaaaagaatactagttaggac 22790135



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 73/90 (81%)
 Strand = Plus / Minus

                                                                            
Query: 314      tcacttctgatccgtctgcagctgctccagccaagcaccaatggccatctgatccaatat 373
                |||||||||||||   |||| |||||| ||||||||||| ||  || |||| ||||| | 
Sbjct: 22789906 tcacttctgatccaggtgcatctgctcaagccaagcaccgatcaccgtctggtccaacaa 22789847

                                              
Query: 374      atcagcctggttgttccagtcaggcctgtt 403
                 ||| |||| ||||||  ||||||||||||
Sbjct: 22789846 gtcaccctgattgttcaggtcaggcctgtt 22789817
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>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1092_A07
          Length = 137081

 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/96 (93%), Gaps = 3/96 (3%)
 Strand = Plus / Minus

                                                                          
Query: 179    accaccatctctgactttgcc-accaaaaatt-caagaataaaaatgaataa-ttattat 235
              ||||||||||||||||||||| |||||||||| ||||||| |||| |||||| |||||||
Sbjct: 109397 accaccatctctgactttgcccaccaaaaatttcaagaattaaaaagaataaattattat 109338

                                                  
Query: 236    ttactaggaccagcaactattctttggtaaataacc 271
              |||||||||||| |||||||||||||||||||||||
Sbjct: 109337 ttactaggaccaacaactattctttggtaaataacc 109302



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                          
Query: 502    caaaccctggttggtcagggcatctcaatcgatccagctcctcaccatcaacaccccagt 561
              |||||||||||||  |||||| |||||| ||  | |||||||| | ||| ||||||||||
Sbjct: 109051 caaaccctggttgtgcagggcgtctcaagcggactagctcctcgctatcgacaccccagt 108992

                                 
Query: 562    caaccttacccattgggga 580
              ||||||||||||| |||||
Sbjct: 108991 caaccttacccatcgggga 108973



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 58     ctgaactaaccaaaagaatactagttaggac 88
              |||| |||| |||||||||||||||||||||
Sbjct: 109507 ctgagctaatcaaaagaatactagttaggac 109477



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 73/90 (81%)
 Strand = Plus / Minus

                                                                          
Query: 314    tcacttctgatccgtctgcagctgctccagccaagcaccaatggccatctgatccaatat 373
              |||||||||||||   |||| |||||| ||||||||||| ||  || |||| ||||| | 
Sbjct: 109248 tcacttctgatccaggtgcatctgctcaagccaagcaccgatcaccgtctggtccaacaa 109189

                                            
Query: 374    atcagcctggttgttccagtcaggcctgtt 403
               ||| |||| ||||||  ||||||||||||
Sbjct: 109188 gtcaccctgattgttcaggtcaggcctgtt 109159
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>dbj|AK067895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123G12, full
            insert sequence
          Length = 2676

 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/96 (93%), Gaps = 3/96 (3%)
 Strand = Plus / Minus

                                                                        
Query: 179  accaccatctctgactttgcc-accaaaaatt-caagaataaaaatgaataa-ttattat 235
            ||||||||||||||||||||| |||||||||| ||||||| |||| |||||| |||||||
Sbjct: 2373 accaccatctctgactttgcccaccaaaaatttcaagaattaaaaagaataaattattat 2314

                                                
Query: 236  ttactaggaccagcaactattctttggtaaataacc 271
            |||||||||||| |||||||||||||||||||||||
Sbjct: 2313 ttactaggaccaacaactattctttggtaaataacc 2278



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                        
Query: 502  caaaccctggttggtcagggcatctcaatcgatccagctcctcaccatcaacaccccagt 561
            |||||||||||||  |||||| |||||| ||  | |||||||| | ||| ||||||||||
Sbjct: 2027 caaaccctggttgtgcagggcgtctcaagcggactagctcctcgctatcgacaccccagt 1968

                               
Query: 562  caaccttacccattgggga 580
            ||||||||||||| |||||
Sbjct: 1967 caaccttacccatcgggga 1949



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 58   ctgaactaaccaaaagaatactagttaggac 88
            |||| |||| |||||||||||||||||||||
Sbjct: 2483 ctgagctaatcaaaagaatactagttaggac 2453



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 73/90 (81%)
 Strand = Plus / Minus

                                                                        
Query: 314  tcacttctgatccgtctgcagctgctccagccaagcaccaatggccatctgatccaatat 373
            |||||||||||||   |||| |||||| ||||||||||| ||  || |||| ||||| | 
Sbjct: 2224 tcacttctgatccaggtgcatctgctcaagccaagcaccgatcaccgtctggtccaacaa 2165

                                          
Query: 374  atcagcctggttgttccagtcaggcctgtt 403
             ||| |||| ||||||  ||||||||||||
Sbjct: 2164 gtcaccctgattgttcaggtcaggcctgtt 2135
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>dbj|AK067784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116A14, full
            insert sequence
          Length = 2599

 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/96 (93%), Gaps = 3/96 (3%)
 Strand = Plus / Minus

                                                                        
Query: 179  accaccatctctgactttgcc-accaaaaatt-caagaataaaaatgaataa-ttattat 235
            ||||||||||||||||||||| |||||||||| ||||||| |||| |||||| |||||||
Sbjct: 2360 accaccatctctgactttgcccaccaaaaatttcaagaattaaaaagaataaattattat 2301

                                                
Query: 236  ttactaggaccagcaactattctttggtaaataacc 271
            |||||||||||| |||||||||||||||||||||||
Sbjct: 2300 ttactaggaccaacaactattctttggtaaataacc 2265



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                        
Query: 502  caaaccctggttggtcagggcatctcaatcgatccagctcctcaccatcaacaccccagt 561
            |||||||||||||  |||||| |||||| ||  | |||||||| | ||| ||||||||||
Sbjct: 2014 caaaccctggttgtgcagggcgtctcaagcggactagctcctcgctatcgacaccccagt 1955

                               
Query: 562  caaccttacccattgggga 580
            ||||||||||||| |||||
Sbjct: 1954 caaccttacccatcgggga 1936



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 58   ctgaactaaccaaaagaatactagttaggac 88
            |||| |||| |||||||||||||||||||||
Sbjct: 2470 ctgagctaatcaaaagaatactagttaggac 2440



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 73/90 (81%)
 Strand = Plus / Minus

                                                                        
Query: 314  tcacttctgatccgtctgcagctgctccagccaagcaccaatggccatctgatccaatat 373
            |||||||||||||   |||| |||||| ||||||||||| ||  || |||| ||||| | 
Sbjct: 2211 tcacttctgatccaggtgcatctgctcaagccaagcaccgatcaccgtctggtccaacaa 2152

                                          
Query: 374  atcagcctggttgttccagtcaggcctgtt 403
             ||| |||| ||||||  ||||||||||||
Sbjct: 2151 gtcaccctgattgttcaggtcaggcctgtt 2122
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>emb|AJ575241.1|OSA575241 Oryza sativa (japonica cultivar-group) partial mRNA for ZF protein
          Length = 800

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                       
Query: 502 caaaccctggttggtcagggcatctcaatcgatccagctcctcaccatcaacaccccagt 561
           |||||||||||||  |||||| |||||| ||  | |||||||| | ||| ||||||||||
Sbjct: 670 caaaccctggttgtgcagggcgtctcaagcggactagctcctcgctatcgacaccccagt 611

                              
Query: 562 caaccttacccattgggga 580
           ||||||||||||| |||||
Sbjct: 610 caaccttacccatcgggga 592
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>gb|BT019091.1| Zea mays clone Contig689.F mRNA sequence
          Length = 1121

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 58  ctgaactaaccaaaagaatactagttaggac 88
           ||||||||| |||||||||||||||||||||
Sbjct: 945 ctgaactaatcaaaagaatactagttaggac 915



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 611 attccgcggcgaacccaccgatggcagctggtgcttgttcagg 653
           |||||| ||||| ||||| ||||||| ||||||||||||||||
Sbjct: 385 attccgtggcgatcccacagatggcacctggtgcttgttcagg 343
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>gb|AY110023.1| Zea mays CL41684_1 mRNA sequence
          Length = 548

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 58  ctgaactaaccaaaagaatactagttaggac 88
           ||||||||| |||||||||||||||||||||
Sbjct: 447 ctgaactaatcaaaagaatactagttaggac 417
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>gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete sequence
          Length = 108900

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 214   aataaaaatgaataattattat 235
             ||||||||||||||||||||||
Sbjct: 67779 aataaaaatgaataattattat 67758
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>gb|AC093868.2| Homo sapiens BAC clone RP11-590C19 from 4, complete sequence
          Length = 163334

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 185   atctctgactttgccaccaaaa 206
             ||||||||||||||||||||||
Sbjct: 68497 atctctgactttgccaccaaaa 68518
to top
>gb|AC104170.2| Homo sapiens chromosome 1 clone RP11-253A20, complete sequence
          Length = 141670

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 63    ctaaccaaaagaatactagtta 84
             ||||||||||||||||||||||
Sbjct: 39131 ctaaccaaaagaatactagtta 39152
to top
>gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, complete sequence
          Length = 218156

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 206   aattcaagaataaaaatgaat 226
             |||||||||||||||||||||
Sbjct: 10907 aattcaagaataaaaatgaat 10927
to top
>ref|XM_629451.1| Dictyostelium discoideum hypothetical protein (DDB0191706), partial
            mRNA
          Length = 2460

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 216  taaaaatgaataattattatt 236
            |||||||||||||||||||||
Sbjct: 1422 taaaaatgaataattattatt 1402
to top
>gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4,
             complete sequence
          Length = 302156

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 214   aataaaaatgaataattattattta 238
             ||||||||| |||||||||||||||
Sbjct: 61652 aataaaaataaataattattattta 61676
to top
>gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC F18C1 genomic sequence,
             complete sequence
          Length = 100887

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 221   atgaataattattatttacta 241
             |||||||||||||||||||||
Sbjct: 26432 atgaataattattatttacta 26412
to top
>gb|AC123074.2| Mus musculus BAC clone RP23-168H19 from 10, complete sequence
          Length = 210189

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 206   aattcaagaataaaaatgaat 226
             |||||||||||||||||||||
Sbjct: 20028 aattcaagaataaaaatgaat 20008
to top
>gb|AF186189.3| Homo sapiens chromosome 8 clone GS1-403B2 map 8q21-q23, compete
             sequence., complete sequence
          Length = 72142

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 216   taaaaatgaataattattatt 236
             |||||||||||||||||||||
Sbjct: 29324 taaaaatgaataattattatt 29344
to top
>gb|AC080009.13| Homo sapiens 3q BAC RP11-460M17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 163469

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 215   ataaaaatgaataattattat 235
             |||||||||||||||||||||
Sbjct: 75234 ataaaaatgaataattattat 75214
to top
>gb|AC160650.2| Pan troglodytes BAC clone CH251-548K10 from chromosome unknown,
             complete sequence
          Length = 184125

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 216   taaaaatgaataattattatt 236
             |||||||||||||||||||||
Sbjct: 14482 taaaaatgaataattattatt 14462
to top
>gb|AC163744.3| Pan troglodytes BAC clone CH251-376E11 from chromosome unknown,
             complete sequence
          Length = 195342

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 216   taaaaatgaataattattatt 236
             |||||||||||||||||||||
Sbjct: 92152 taaaaatgaataattattatt 92172
to top
>gb|AC175061.3| Pan troglodytes BAC clone CH251-572M8 from chromosome unknown, complete
              sequence
          Length = 191409

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 216    taaaaatgaataattattatt 236
              |||||||||||||||||||||
Sbjct: 114969 taaaaatgaataattattatt 114949
to top
>gb|AC109327.10| Homo sapiens chromosome 17, clone RP11-93C20, complete sequence
          Length = 113000

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 297   actgtggcctccttcagtcac 317
             |||||||||||||||||||||
Sbjct: 46164 actgtggcctccttcagtcac 46184
to top
>gb|AC133638.7| Homo sapiens chromosome 17, clone CTD-2125J20, complete sequence
          Length = 139560

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 297  actgtggcctccttcagtcac 317
            |||||||||||||||||||||
Sbjct: 4401 actgtggcctccttcagtcac 4381
to top
>emb|BX571686.2| Carp DNA sequence from clone carpf-C114, complete sequence
          Length = 30720

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   aaaatgaataattattattta 238
             |||||||||||||||||||||
Sbjct: 27029 aaaatgaataattattattta 27049
to top
>dbj|AP002469.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-266E8, complete
              sequence
          Length = 158977

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 482    tgcatccggctccttctctgcaaac 506
              |||||||||||||| ||||||||||
Sbjct: 150513 tgcatccggctcctcctctgcaaac 150537
to top
>dbj|AP002762.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-811I7, complete
             sequence
          Length = 189993

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 482   tgcatccggctccttctctgcaaac 506
             |||||||||||||| ||||||||||
Sbjct: 47348 tgcatccggctcctcctctgcaaac 47372
to top
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 209    tcaagaataaaaatgaataattatt 233
              ||||||||||||||||||| |||||
Sbjct: 485212 tcaagaataaaaatgaatatttatt 485236
to top
>gb|AC159013.2| Gallus gallus BAC clone CH261-33A3 from chromosome unknown, complete
             sequence
          Length = 166005

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 214   aataaaaatgaataattattattta 238
             |||||||||| ||||||||||||||
Sbjct: 52615 aataaaaatgcataattattattta 52591
to top
>gb|AC160643.2| Gallus gallus BAC clone CH261-123L21 from chromosome unknown, complete
             sequence
          Length = 267345

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 214   aataaaaatgaataattattattta 238
             |||||||||| ||||||||||||||
Sbjct: 46489 aataaaaatgcataattattattta 46465
to top
>gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, complete sequence
          Length = 209693

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 206    aattcaagaataaaaatgaat 226
              |||||||||||||||||||||
Sbjct: 172805 aattcaagaataaaaatgaat 172785
to top
>emb|AL591490.12| Mouse DNA sequence from clone RP23-144O20 on chromosome 2, complete
             sequence
          Length = 192082

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 214   aataaaaatgaataattatta 234
             |||||||||||||||||||||
Sbjct: 54608 aataaaaatgaataattatta 54588
to top
>dbj|AP004295.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1907E5
          Length = 154597

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 216   taaaaatgaataattattatt 236
             |||||||||||||||||||||
Sbjct: 89862 taaaaatgaataattattatt 89842
to top
>ref|NM_025218.2| Homo sapiens UL16 binding protein 1 (ULBP1), mRNA
          Length = 3160

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  caccaccatctctgactttg 197
            ||||||||||||||||||||
Sbjct: 2274 caccaccatctctgactttg 2255
to top
>gb|AC161754.4| Mus musculus BAC clone RP24-446K8 from chromosome 1, complete sequence
          Length = 158536

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   caagaataaaaatgaataattatt 233
             |||||||||||||| |||||||||
Sbjct: 23329 caagaataaaaatgtataattatt 23352
to top
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone
             OSJNBb0003F09, complete sequence
          Length = 159600

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   atttactaggaccagcaact 253
             ||||||||||||||||||||
Sbjct: 53217 atttactaggaccagcaact 53236
to top
>gb|AC115719.10| Mus musculus chromosome 18, clone RP24-356J16, complete sequence
          Length = 177037

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    aattcaagaataaaaatgaa 225
              ||||||||||||||||||||
Sbjct: 101550 aattcaagaataaaaatgaa 101531
to top
>gb|L17343.1|HVPTGMRGZ Helicoverpa punctigera tRNA-Met gene, partial sequence; D-loop,
           complete sequence; and 12S ribosomal RNA gene, partial
           sequence; mitochondrial
          Length = 654

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 215 ataaaaatgaataattattattta 238
           |||||||| |||||||||||||||
Sbjct: 441 ataaaaataaataattattattta 418
to top
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 544     caccatcaacaccccagtca 563
               ||||||||||||||||||||
Sbjct: 1361273 caccatcaacaccccagtca 1361292
to top
>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    aaaaattcaagaataaaaat 222
              ||||||||||||||||||||
Sbjct: 873281 aaaaattcaagaataaaaat 873262
to top
>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome
          Length = 897405

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    aaaaattcaagaataaaaat 222
              ||||||||||||||||||||
Sbjct: 854628 aaaaattcaagaataaaaat 854609
to top
>gb|AC102228.8| Mus musculus chromosome 13, clone RP24-64M1, complete sequence
          Length = 201286

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   aataaaaatgaataattatt 233
             ||||||||||||||||||||
Sbjct: 49859 aataaaaatgaataattatt 49878
to top
>emb|CR392027.16| Zebrafish DNA sequence from clone CH211-139G16 in linkage group 3,
             complete sequence
          Length = 110726

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 208   ttcaagaataaaaatgaataattattat 235
             |||||||||||||  |||||||||||||
Sbjct: 96931 ttcaagaataaaagagaataattattat 96904
to top
>gb|AC104964.12| Homo sapiens chromosome 8, clone RP11-981G7, complete sequence
          Length = 212226

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   tgctccagccaagcaccaat 355
             ||||||||||||||||||||
Sbjct: 87889 tgctccagccaagcaccaat 87870
to top
>gb|AC106818.2| Homo sapiens chromosome 5 clone RP11-65F13, complete sequence
          Length = 180056

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   aataaaaatgaataattatt 233
             ||||||||||||||||||||
Sbjct: 92740 aataaaaatgaataattatt 92759
to top
>gb|AE017245.1| Mycoplasma synoviae 53, complete genome
          Length = 799476

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    aagaataaaaatgaataatt 230
              ||||||||||||||||||||
Sbjct: 469486 aagaataaaaatgaataatt 469505
to top
>emb|AL590682.9| Human DNA sequence from clone RP11-435F13 on chromosome 1 Contains a
              heterogeneous nuclear ribonucleoprotein A1 (HNRPA1)
              pseudogene, part of the RGS7 gene for regulator of
              G-protein signalling 7 and a ribosomal protein large P1
              (RPLP1) pseudogene, complete sequence
          Length = 155156

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    aactattctttggtaaataa 269
              ||||||||||||||||||||
Sbjct: 148841 aactattctttggtaaataa 148822
to top
>emb|AL355497.14| Human DNA sequence from clone RP11-472G23 on chromosome 6 Contains the
             ULBP1 gene for UL16 binding protein 1, a basic
             transcription factor 3 (BTF3) pseudogene, a pseudogene
             similar to UL16 binding protein 1 (ULBP1), two retinoic
             acid early transcript 1 (RAET1L) pseudogenes, the gene for
             retinoic acid early transcript 1 (RAET1L), a prohibitin
             (PHB) pseudogene, the ULBP3 gene for UL16 binding protein
             3, the 5' end of the PPP1R14C gene for PPP1R14C gene for
             protein phosphatase 1 regulatory (inhibitor) subunit 14C
             (KEPI NY-BR-81 CPI17-like), a novel gene and eight CpG
             islands, complete sequence
          Length = 215397

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   caccaccatctctgactttg 197
             ||||||||||||||||||||
Sbjct: 39501 caccaccatctctgactttg 39520



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   caccaccatctctgactttg 197
             ||||||||||||||||||||
Sbjct: 18956 caccaccatctctgactttg 18937
to top
>emb|AL139083.15| Human DNA sequence from clone RP11-270C18 on chromosome 13 Contains the
             3' end of the NBEA gene for neurobeachin (BCL8B FLJ10197
             KIAA1544) and a novel gene, complete sequence
          Length = 162081

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   caaaaattcaagaataaaaa 221
             ||||||||||||||||||||
Sbjct: 32841 caaaaattcaagaataaaaa 32860
to top
>emb|AL138832.10| Human DNA sequence from clone RP3-445H2 on chromosome 6q25.1-26
             Contains part of the synaptic nuclei expressed gene 1b
             (SYNE-1) (nesprin-1 beta, MYNE1, SYNE1, KIAA0796) and the
             gene for a novel protein, complete sequence
          Length = 139011

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   atctctgactttgccaccaa 204
             ||||||||||||||||||||
Sbjct: 71787 atctctgactttgccaccaa 71806
to top
>emb|CR847536.5| Zebrafish DNA sequence from clone DKEY-188N1 in linkage group 6,
            complete sequence
          Length = 67962

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 264  aaataaccaccttgcaaaatgatg 287
            |||||||| |||||||||||||||
Sbjct: 9401 aaataacctccttgcaaaatgatg 9378
to top
>gb|BC035416.1| Homo sapiens UL16 binding protein 1, mRNA (cDNA clone MGC:41778
            IMAGE:4822311), complete cds
          Length = 3160

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  caccaccatctctgactttg 197
            ||||||||||||||||||||
Sbjct: 2274 caccaccatctctgactttg 2255
to top
>gb|AC162181.2| Mus musculus BAC clone RP23-49J15 from chromosome 12, complete sequence
          Length = 215236

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   catctctgactttgccacca 203
             ||||||||||||||||||||
Sbjct: 93507 catctctgactttgccacca 93526
to top
>gb|AC090024.11| Homo sapiens 3q BAC RP11-259J3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 104389

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 207   attcaagaataaaaatgaataatt 230
             ||||| ||||||||||||||||||
Sbjct: 48654 attcaggaataaaaatgaataatt 48631
to top
>gb|AC118990.2| Homo sapiens chromosome 1 clone RP11-243K11, complete sequence
          Length = 48385

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 218   aaaatgaataattattatttacta 241
             ||||||||||||||||||| ||||
Sbjct: 31288 aaaatgaataattattattgacta 31265
to top
>gb|AC013650.8| Homo sapiens chromosome 8, clone RP11-24L2, complete sequence
          Length = 147242

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 265    aataaccaccttgcaaaatg 284
              ||||||||||||||||||||
Sbjct: 133853 aataaccaccttgcaaaatg 133834
to top
>gb|AC096763.2| Homo sapiens BAC clone RP11-625A6 from 4, complete sequence
          Length = 168710

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    aattcaagaataaaaatgaa 225
              ||||||||||||||||||||
Sbjct: 137419 aattcaagaataaaaatgaa 137438
to top
>gb|AC108102.2| Homo sapiens chromosome 5 clone RP11-185E12, complete sequence
          Length = 161056

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    aataaaaatgaataattatt 233
              ||||||||||||||||||||
Sbjct: 157613 aataaaaatgaataattatt 157594
to top
>emb|BX322601.9| Zebrafish DNA sequence from clone DKEY-170H8 in linkage group 7, complete
              sequence
          Length = 210153

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 214    aataaaaatgaataattattattt 237
              ||||||||| ||||||||||||||
Sbjct: 209258 aataaaaattaataattattattt 209235
to top
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     attcaagaataaaaatgaat 226
               ||||||||||||||||||||
Sbjct: 1659188 attcaagaataaaaatgaat 1659207
to top
>gb|AF268057.1| Candidatus Carsonella ruddii natural-host Acizzia uncatoides RNA
            polymerase beta subunit (rpoB) and RNA polymerase
            beta-prime subunit (rpoC) genes, partial cds
          Length = 2721

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 217  aaaaatgaataattattatt 236
            ||||||||||||||||||||
Sbjct: 1727 aaaaatgaataattattatt 1708
to top
>gb|AC013751.6|AC013751 Homo sapiens chromosome , clone RP11-298P6, complete sequence
          Length = 205816

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    aataaaaatgaataattatt 233
              ||||||||||||||||||||
Sbjct: 119395 aataaaaatgaataattatt 119376
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 234      atttactaggaccagcaact 253
                ||||||||||||||||||||
Sbjct: 26928250 atttactaggaccagcaact 26928269
to top
>gb|AC017101.10| Homo sapiens BAC clone RP11-556A11 from 2, complete sequence
          Length = 195635

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   caagaataaaaatgaataat 229
             ||||||||||||||||||||
Sbjct: 33703 caagaataaaaatgaataat 33684
to top
>gb|AC007222.5| Homo sapiens chromosome 16 clone RP11-441K8, complete sequence
          Length = 187191

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   aatgatggtttcatcaactg 300
             ||||||||||||||||||||
Sbjct: 50151 aatgatggtttcatcaactg 50170
to top
>emb|AL935161.18| Mouse DNA sequence from clone RP23-433M8 on chromosome 2, complete
              sequence
          Length = 144625

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 114    ctgaatatcctcaactgctttcag 137
              ||||||||| ||||||||||||||
Sbjct: 133441 ctgaatatcatcaactgctttcag 133464
to top
>gb|AC123942.4| Mus musculus BAC clone RP23-470C23 from 1, complete sequence
          Length = 170567

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 210    caagaataaaaatgaataattatt 233
              |||||||||||||| |||||||||
Sbjct: 153261 caagaataaaaatgtataattatt 153284
to top
>emb|CT737180.5| M.truncatula DNA sequence from clone MTH2-117L19 on chromosome 3,
             complete sequence
          Length = 130239

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   gaataaaaatgaataattat 232
             ||||||||||||||||||||
Sbjct: 22104 gaataaaaatgaataattat 22085
to top
>gb|AF098461.1|AF098461 Lactobacillus salivarius subsp. salivarius malolactic enzyme (mle)
           gene, partial cds
          Length = 485

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 544 caccatcaacaccccagtca 563
           ||||||||||||||||||||
Sbjct: 294 caccatcaacaccccagtca 313
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>gb|AY170450.2| Tolypella nidifica tRNA-Lys (trnK) gene, partial sequence; and
           maturase K (matK) gene, complete cds; chloroplast
          Length = 2292

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 215 ataaaaatgaataattattattta 238
           |||||||||||| |||||||||||
Sbjct: 566 ataaaaatgaattattattattta 543
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>emb|CR974440.6| Zebrafish DNA sequence from clone CH73-78M16 in linkage group 22,
              complete sequence
          Length = 123466

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    aatgaataattattatttac 239
              ||||||||||||||||||||
Sbjct: 121292 aatgaataattattatttac 121311



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   aatgaataattattatttac 239
             ||||||||||||||||||||
Sbjct: 40722 aatgaataattattatttac 40741
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>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    aaaaattcaagaataaaaat 222
              ||||||||||||||||||||
Sbjct: 847639 aaaaattcaagaataaaaat 847620
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 234      atttactaggaccagcaact 253
                ||||||||||||||||||||
Sbjct: 26856420 atttactaggaccagcaact 26856439
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>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 142370

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    atttactaggaccagcaact 253
              ||||||||||||||||||||
Sbjct: 132217 atttactaggaccagcaact 132236
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>gb|AC127590.3| Mus musculus BAC clone RP23-147I5 from 13, complete sequence
          Length = 208251

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   aataaaaatgaataattatt 233
             ||||||||||||||||||||
Sbjct: 28622 aataaaaatgaataattatt 28603
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>gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complete sequence
          Length = 249251

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    aataaaaatgaataattatt 233
              ||||||||||||||||||||
Sbjct: 127109 aataaaaatgaataattatt 127128


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,212,405
Number of Sequences: 3902068
Number of extensions: 8212405
Number of successful extensions: 162638
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 162198
Number of HSP's gapped (non-prelim): 434
length of query: 691
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 668
effective length of database: 17,143,297,704
effective search space: 11451722866272
effective search space used: 11451722866272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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